AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0425810


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0425810 MtrunA17_Chr3g0127901 94.081 321 11 3 1 321 41 353 0.0 597
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0425810 AT5G24490.1 71.130 239 67 2 84 321 71 308 4.79e-120 348

Find 118 sgRNAs with CRISPR-Local

Find 320 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGAGGGTGACTTGGTCTTTA+TGG 0.117605 3_2:+76209107 None:intergenic
ACGATTGTCTCTTTCCATTT+TGG 0.132482 3_2:+76209335 None:intergenic
GATAGTAATAGCAATTTCTT+TGG 0.267107 3_2:-76207517 Msa0425810:three_prime_UTR
GCTGCTGCCGCCGCGGCGTT+TGG 0.274036 3_2:+76209011 None:intergenic
ATTGCTTCAAACACGGTTAA+AGG 0.283097 3_2:+76207905 None:intergenic
ATCTGCTTCACCGTTTCCTT+TGG 0.285013 3_2:+76207652 None:intergenic
AAGAAAGCTGAGAAAGATTA+AGG 0.301741 3_2:-76208374 Msa0425810:CDS
AAACGGTGAAGCAGATAAAT+TGG 0.329912 3_2:-76207645 Msa0425810:CDS
CGCCGCGGCGGCAGCAGCGG+CGG 0.337270 3_2:-76209006 Msa0425810:CDS
ACTCGTGGTGGAGGAGAATT+TGG 0.356620 3_2:-76208621 Msa0425810:CDS
ATGTTCATCGTCATCCAAAA+TGG 0.359200 3_2:-76209349 Msa0425810:five_prime_UTR
AAAAGAAAAGAAGGAGGTTA+TGG 0.362880 3_2:-76207686 Msa0425810:CDS
TTCATCCTCCTCATCCTTTG+TGG 0.374734 3_2:+76208276 None:intergenic
TCTGCTTCACCGTTTCCTTT+GGG 0.387106 3_2:+76207653 None:intergenic
TCCTCATCCTTTGTGGGTAA+TGG 0.390537 3_2:+76208283 None:intergenic
TTTCTTCTTCCTCCTTCTGT+GGG 0.392843 3_2:+76208242 None:intergenic
TTAGCCGGTTCAACCACTAT+AGG 0.402037 3_2:+76207620 None:intergenic
GCATGGGGTGGTGCGGGCTG+AGG 0.403257 3_2:-76208449 Msa0425810:CDS
TACCTATGCGAGTATAGATT+TGG 0.408357 3_2:-76208413 Msa0425810:CDS
ACCTCGCATCTACGTGTTCT+AGG 0.409433 3_2:+76208591 None:intergenic
AAAGAGGCATGGGGTGGTGC+GGG 0.416801 3_2:-76208455 Msa0425810:CDS
TGAAATTCTAATGGAGACTC+TGG 0.418491 3_2:-76207478 Msa0425810:three_prime_UTR
GCCACATGAAGGGATCTAAT+AGG 0.418680 3_2:-76208330 Msa0425810:CDS
TCATCCTCCTCATCCTTTGT+GGG 0.419500 3_2:+76208277 None:intergenic
AAACGCCGCGGCGGCAGCAG+CGG 0.425141 3_2:-76209009 Msa0425810:CDS
TCTCCGTTGTTTGTATGTCA+TGG 0.434579 3_2:-76208978 Msa0425810:CDS
AGTTGCATATGAAATTCTAA+TGG 0.448766 3_2:-76207487 Msa0425810:three_prime_UTR
TTCCGTCAAATTAATCATCC+AGG 0.449850 3_2:-76208941 Msa0425810:CDS
AGAGGAAGAAGAAGAGGAGG+AGG 0.461261 3_2:+76209173 None:intergenic
TGTAGAGAGGGTTCTTTAGC+CGG 0.466266 3_2:+76207605 None:intergenic
ACCCTGGATGATTAATTTGA+CGG 0.468958 3_2:+76208939 None:intergenic
TCCTTTCATTCTTGTAGAGA+GGG 0.474483 3_2:+76207593 None:intergenic
TGGATAATCTATGAGTAGGC+TGG 0.474943 3_2:-76209401 None:intergenic
CTTTGTTTACAAAGAGGCAT+GGG 0.478410 3_2:-76208465 Msa0425810:CDS
ATTGTATACAAAAGAAAAGA+AGG 0.479149 3_2:-76207695 Msa0425810:CDS
CTCCGTTGTTTGTATGTCAT+GGG 0.482798 3_2:-76208977 Msa0425810:CDS
GGAGCCTATAGTGGTTGAAC+CGG 0.496037 3_2:-76207624 Msa0425810:CDS
CAAAGAGGCATGGGGTGGTG+CGG 0.497915 3_2:-76208456 Msa0425810:CDS
AGCAATTGACCAGTTGGAAA+TGG 0.498256 3_2:-76207888 Msa0425810:CDS
TCTATGAGTAGGCTGGGAAA+TGG 0.499776 3_2:-76209394 Msa0425810:five_prime_UTR
CTCATTATTCCCAAAGGAAA+CGG 0.502483 3_2:-76207662 Msa0425810:CDS
CTTCATTCATAATATGTCAA+TGG 0.507528 3_2:-76209232 Msa0425810:exon
TTCTCCTGTCAAGAATGTTG+TGG 0.508305 3_2:+76209086 None:intergenic
CCCTCCACAACATTCTTGAC+AGG 0.515980 3_2:-76209090 Msa0425810:CDS
ACCCTCTCTACAAGAATGAA+AGG 0.518644 3_2:-76207594 Msa0425810:exon
GGAAGAGGAAATAATGATGA+TGG 0.521427 3_2:+76209297 None:intergenic
AGATAAATTGGAGCCTATAG+TGG 0.523119 3_2:-76207633 Msa0425810:CDS
CATGAGCAACCATTTCCAAC+TGG 0.524804 3_2:+76207879 None:intergenic
TCCTGTCAAGAATGTTGTGG+AGG 0.525749 3_2:+76209089 None:intergenic
ACTTTGTTTACAAAGAGGCA+TGG 0.529041 3_2:-76208466 Msa0425810:CDS
GAAATTCTAATGGAGACTCT+GGG 0.530283 3_2:-76207477 Msa0425810:three_prime_UTR
GTTTGAAGCAATTGACCAGT+TGG 0.532744 3_2:-76207894 Msa0425810:CDS
GGATAATCTATGAGTAGGCT+GGG 0.534094 3_2:-76209400 None:intergenic
GCCATTACCCACAAAGGATG+AGG 0.535853 3_2:-76208284 Msa0425810:CDS
TTCCTTTCATTCTTGTAGAG+AGG 0.539789 3_2:+76207592 None:intergenic
GAATGTTGTGGAGGGTGACT+TGG 0.542454 3_2:+76209098 None:intergenic
CTGTAAATATGAAAGAAAGA+AGG 0.544569 3_2:+76209276 None:intergenic
CCGCGTAGAGGAAGAAGAAG+AGG 0.546986 3_2:+76209167 None:intergenic
TGATCATGGTCGCCACATGA+AGG 0.549029 3_2:-76208341 Msa0425810:CDS
GTCTTTATGGAGGAAAGTAG+AGG 0.549206 3_2:+76209120 None:intergenic
AACCGCCGCTGCTGCCGCCG+CGG 0.549932 3_2:+76209004 None:intergenic
TTTATGGAGGAAAGTAGAGG+AGG 0.557451 3_2:+76209123 None:intergenic
GTTGTTTGTATGTCATGGGA+CGG 0.558277 3_2:-76208973 Msa0425810:CDS
ATATGAAAGAAAGAAGGAAG+AGG 0.558872 3_2:+76209282 None:intergenic
GTTATGTGCAGCACACTCAA+TGG 0.559392 3_2:+76207367 None:intergenic
ACAACATTCTTGACAGGAGA+AGG 0.561368 3_2:-76209084 Msa0425810:CDS
GCGTTTGGTTGTTGTTGTTG+TGG 0.561693 3_2:+76209026 None:intergenic
AAGAGATTGTACATGATTAG+CGG 0.565384 3_2:-76207539 Msa0425810:three_prime_UTR
GATCATGGTCGCCACATGAA+GGG 0.566295 3_2:-76208340 Msa0425810:CDS
CGTAGAGGAAGAAGAAGAGG+AGG 0.569409 3_2:+76209170 None:intergenic
ATTAATTTGACGGAAGAGAG+TGG 0.569781 3_2:+76208949 None:intergenic
TGAAATCTCCCCACAGAAGG+AGG 0.570050 3_2:-76208251 Msa0425810:CDS
CAGCTTTCTTTGAATGACCG+AGG 0.571209 3_2:+76208387 None:intergenic
ACAGCACGTAGAGGAGAAAG+TGG 0.574125 3_2:-76208700 Msa0425810:CDS
AAAGGTTTGTGTGGAAGTTG+AGG 0.576099 3_2:+76209202 None:intergenic
AGACTATCTACTCGTGGTGG+AGG 0.576666 3_2:-76208630 Msa0425810:CDS
AGGTTACTTTGTTTACAAAG+AGG 0.577297 3_2:-76208471 Msa0425810:CDS
GTTATGGATAATCTATGAGT+AGG 0.580925 3_2:-76209405 None:intergenic
AACTGAAATCTCCCCACAGA+AGG 0.585420 3_2:-76208254 Msa0425810:CDS
TCCGTCAAATTAATCATCCA+GGG 0.585766 3_2:-76208940 Msa0425810:CDS
CTGGTCAATTGCTTCAAACA+CGG 0.587799 3_2:+76207898 None:intergenic
TTCTTCTTCCTCCTTCTGTG+GGG 0.588690 3_2:+76208243 None:intergenic
GGTGCGGGCTGAGGAACATG+CGG 0.592841 3_2:-76208440 Msa0425810:CDS
CAGCACGTAGAGGAGAAAGT+GGG 0.593436 3_2:-76208699 Msa0425810:CDS
TACAGAAAGGCACCGCGTAG+AGG 0.594586 3_2:+76209155 None:intergenic
GAGTATAGATTTGGTGTCCT+CGG 0.603285 3_2:-76208404 Msa0425810:CDS
TATGGACTCATTATTCCCAA+AGG 0.604836 3_2:-76207668 Msa0425810:CDS
GAGGAAGAGAGAGTACAGAA+AGG 0.608429 3_2:+76209142 None:intergenic
GGTGGAGGAGAATTTGGTCG+AGG 0.611696 3_2:-76208615 Msa0425810:CDS
TAGGTTGAAATTTAGAGAGG+CGG 0.613252 3_2:-76208311 Msa0425810:CDS
GCTTCAAACACGGTTAAAGG+AGG 0.615142 3_2:+76207908 None:intergenic
CACCAAATCTATACTCGCAT+AGG 0.617087 3_2:+76208411 None:intergenic
GGGTGACTTGGTCTTTATGG+AGG 0.617212 3_2:+76209110 None:intergenic
GTTTACAAAGAGGCATGGGG+TGG 0.620636 3_2:-76208461 Msa0425810:CDS
TAATCATGTACAATCTCTTG+TGG 0.626430 3_2:+76207543 None:intergenic
TTTGGTTGTTGTTGTTGTGG+CGG 0.626673 3_2:+76209029 None:intergenic
ATTCAACTGTGTCTCACACG+CGG 0.627223 3_2:+76209370 None:intergenic
ACCTATTAGATCCCTTCATG+TGG 0.628686 3_2:+76208329 None:intergenic
TAATAGGTTGAAATTTAGAG+AGG 0.630490 3_2:-76208314 Msa0425810:CDS
AAAGCAGACAACATTGTCAG+AGG 0.631060 3_2:+76207326 None:intergenic
TTCAACTGTGTCTCACACGC+GGG 0.640451 3_2:+76209371 None:intergenic
ACATTCTTGACAGGAGAAGG+AGG 0.645382 3_2:-76209081 Msa0425810:CDS
ACCTAGAACACGTAGATGCG+AGG 0.650273 3_2:-76208592 Msa0425810:intron
AGCACGTAGAGGAGAAAGTG+GGG 0.652859 3_2:-76208698 Msa0425810:CDS
GGTATTGCCATTACCCACAA+AGG 0.654530 3_2:-76208290 Msa0425810:CDS
ATTACCCACAAAGGATGAGG+AGG 0.656628 3_2:-76208281 Msa0425810:CDS
TTTGTTTACAAAGAGGCATG+GGG 0.659293 3_2:-76208464 Msa0425810:CDS
CCTGTCAAGAATGTTGTGGA+GGG 0.660271 3_2:+76209090 None:intergenic
ACAACAACCAAACGCCGCGG+CGG 0.660743 3_2:-76209018 Msa0425810:CDS
TGCGGTGAAACAGCACGTAG+AGG 0.663832 3_2:-76208709 Msa0425810:CDS
GTATACAAAAGAAAAGAAGG+AGG 0.667757 3_2:-76207692 Msa0425810:CDS
CCTCTTCTTCTTCCTCTACG+CGG 0.668606 3_2:-76209167 Msa0425810:CDS
ACAACAACAACCAAACGCCG+CGG 0.673009 3_2:-76209021 Msa0425810:CDS
AAATTCTAATGGAGACTCTG+GGG 0.673319 3_2:-76207476 Msa0425810:three_prime_UTR
GTCCCATGACATACAAACAA+CGG 0.689809 3_2:+76208975 None:intergenic
GATGTGAGACTATCTACTCG+TGG 0.713178 3_2:-76208636 Msa0425810:CDS
TTGAGTTCAGCTGAATGATG+CGG 0.727884 3_2:-76208727 Msa0425810:intron
GTGAGACTATCTACTCGTGG+TGG 0.731336 3_2:-76208633 Msa0425810:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATTAAAAACTTTAAAACT+TGG + chr3_2:76209208-76209227 None:intergenic 10.0%
!!! TTATTAAAAACTTTAAAACT+TGG + chr3_2:76209208-76209227 None:intergenic 10.0%
!! TAGTAATGATGATAATAAAA+TGG + chr3_2:76207760-76207779 None:intergenic 15.0%
!!! TTTAAAATTTTGAGTAATCT+GGG + chr3_2:76209378-76209397 None:intergenic 15.0%
!!! ATTTAAAATTTTGAGTAATC+TGG + chr3_2:76209379-76209398 None:intergenic 15.0%
!! TAGTAATGATGATAATAAAA+TGG + chr3_2:76207760-76207779 None:intergenic 15.0%
!!! TTTAAAATTTTGAGTAATCT+GGG + chr3_2:76209378-76209397 None:intergenic 15.0%
!!! ATTTAAAATTTTGAGTAATC+TGG + chr3_2:76209379-76209398 None:intergenic 15.0%
!! GATGATAATAAAATGGAAAT+GGG + chr3_2:76207753-76207772 None:intergenic 20.0%
!! TGATGATAATAAAATGGAAA+TGG + chr3_2:76207754-76207773 None:intergenic 20.0%
!! ATTAGAAAAACTTCAATTTC+TGG - chr3_2:76208532-76208551 Msa0425810:intron 20.0%
!!! TTCAATTTTATGCTATCTTA+GGG - chr3_2:76208881-76208900 Msa0425810:intron 20.0%
!! ATTGTATACAAAAGAAAAGA+AGG - chr3_2:76208943-76208962 Msa0425810:CDS 20.0%
!!! AGTTTTTAATAATGTACACT+TGG - chr3_2:76209216-76209235 Msa0425810:CDS 20.0%
!! GATGATAATAAAATGGAAAT+GGG + chr3_2:76207753-76207772 None:intergenic 20.0%
!! TGATGATAATAAAATGGAAA+TGG + chr3_2:76207754-76207773 None:intergenic 20.0%
!! ATTAGAAAAACTTCAATTTC+TGG - chr3_2:76208532-76208551 Msa0425810:intron 20.0%
!!! TTCAATTTTATGCTATCTTA+GGG - chr3_2:76208881-76208900 Msa0425810:intron 20.0%
!! ATTGTATACAAAAGAAAAGA+AGG - chr3_2:76208943-76208962 Msa0425810:CDS 20.0%
!!! AGTTTTTAATAATGTACACT+TGG - chr3_2:76209216-76209235 Msa0425810:CDS 20.0%
! CTGTAAATATGAAAGAAAGA+AGG + chr3_2:76207365-76207384 None:intergenic 25.0%
! CTTCATTCATAATATGTCAA+TGG - chr3_2:76207406-76207425 Msa0425810:three_prime_UTR 25.0%
!! TGATTTCTATGATTTGCATT+AGG - chr3_2:76208147-76208166 Msa0425810:intron 25.0%
!! TAATAGGTTGAAATTTAGAG+AGG - chr3_2:76208324-76208343 Msa0425810:CDS 25.0%
! ATGATTAATATCAACAACGA+AGG + chr3_2:76208443-76208462 None:intergenic 25.0%
!!! GTTATATTTCTAGAATGACA+CGG + chr3_2:76208492-76208511 None:intergenic 25.0%
!!! AAAAACTTCAATTTCTGGTT+TGG - chr3_2:76208537-76208556 Msa0425810:intron 25.0%
! ATAAAATGTAGTGAGAAACA+TGG + chr3_2:76208853-76208872 None:intergenic 25.0%
!! GTTCAATTTTATGCTATCTT+AGG - chr3_2:76208880-76208899 Msa0425810:intron 25.0%
!! TCAATTTTATGCTATCTTAG+GGG - chr3_2:76208882-76208901 Msa0425810:intron 25.0%
! GATAGTAATAGCAATTTCTT+TGG - chr3_2:76209121-76209140 Msa0425810:CDS 25.0%
! AGTTGCATATGAAATTCTAA+TGG - chr3_2:76209151-76209170 Msa0425810:CDS 25.0%
! CTGTAAATATGAAAGAAAGA+AGG + chr3_2:76207365-76207384 None:intergenic 25.0%
! CTTCATTCATAATATGTCAA+TGG - chr3_2:76207406-76207425 Msa0425810:three_prime_UTR 25.0%
!! TGATTTCTATGATTTGCATT+AGG - chr3_2:76208147-76208166 Msa0425810:intron 25.0%
!! TAATAGGTTGAAATTTAGAG+AGG - chr3_2:76208324-76208343 Msa0425810:CDS 25.0%
! ATGATTAATATCAACAACGA+AGG + chr3_2:76208443-76208462 None:intergenic 25.0%
!!! GTTATATTTCTAGAATGACA+CGG + chr3_2:76208492-76208511 None:intergenic 25.0%
!!! AAAAACTTCAATTTCTGGTT+TGG - chr3_2:76208537-76208556 Msa0425810:intron 25.0%
! ATAAAATGTAGTGAGAAACA+TGG + chr3_2:76208853-76208872 None:intergenic 25.0%
!! GTTCAATTTTATGCTATCTT+AGG - chr3_2:76208880-76208899 Msa0425810:intron 25.0%
!! TCAATTTTATGCTATCTTAG+GGG - chr3_2:76208882-76208901 Msa0425810:intron 25.0%
! GATAGTAATAGCAATTTCTT+TGG - chr3_2:76209121-76209140 Msa0425810:CDS 25.0%
! AGTTGCATATGAAATTCTAA+TGG - chr3_2:76209151-76209170 Msa0425810:CDS 25.0%
ATATGAAAGAAAGAAGGAAG+AGG + chr3_2:76207359-76207378 None:intergenic 30.0%
AGAACAAGTGTAATTAGCAA+CGG - chr3_2:76207853-76207872 Msa0425810:CDS 30.0%
TATAACTAATCTACTAGCTG+TGG - chr3_2:76207888-76207907 Msa0425810:CDS 30.0%
!! TTTGCTTTTGTTGTAAACCT+AGG - chr3_2:76208096-76208115 Msa0425810:intron 30.0%
! AGGTTACTTTGTTTACAAAG+AGG - chr3_2:76208167-76208186 Msa0425810:intron 30.0%
AAGAAAGCTGAGAAAGATTA+AGG - chr3_2:76208264-76208283 Msa0425810:CDS 30.0%
AAGGAAAAAGAAACTGATCA+TGG - chr3_2:76208283-76208302 Msa0425810:CDS 30.0%
GGAAGAAGAAAAACTTATTG+AGG - chr3_2:76208408-76208427 Msa0425810:CDS 30.0%
AGAAGAAAAACTTATTGAGG+AGG - chr3_2:76208411-76208430 Msa0425810:CDS 30.0%
GTAGCTAGAAATATCATATC+AGG - chr3_2:76208466-76208485 Msa0425810:CDS 30.0%
!!! ACTACTGTTTTAGCTATCTT+TGG - chr3_2:76208822-76208841 Msa0425810:intron 30.0%
GTATACAAAAGAAAAGAAGG+AGG - chr3_2:76208946-76208965 Msa0425810:CDS 30.0%
AAAAGAAAAGAAGGAGGTTA+TGG - chr3_2:76208952-76208971 Msa0425810:CDS 30.0%
TAATCATGTACAATCTCTTG+TGG + chr3_2:76209098-76209117 None:intergenic 30.0%
AAGAGATTGTACATGATTAG+CGG - chr3_2:76209099-76209118 Msa0425810:CDS 30.0%
! CTCTTTCATTTTACAATCAC+TGG + chr3_2:76209246-76209265 None:intergenic 30.0%
ATATGAAAGAAAGAAGGAAG+AGG + chr3_2:76207359-76207378 None:intergenic 30.0%
AGAACAAGTGTAATTAGCAA+CGG - chr3_2:76207853-76207872 Msa0425810:CDS 30.0%
TATAACTAATCTACTAGCTG+TGG - chr3_2:76207888-76207907 Msa0425810:CDS 30.0%
!! TTTGCTTTTGTTGTAAACCT+AGG - chr3_2:76208096-76208115 Msa0425810:intron 30.0%
! AGGTTACTTTGTTTACAAAG+AGG - chr3_2:76208167-76208186 Msa0425810:intron 30.0%
AAGAAAGCTGAGAAAGATTA+AGG - chr3_2:76208264-76208283 Msa0425810:CDS 30.0%
AAGGAAAAAGAAACTGATCA+TGG - chr3_2:76208283-76208302 Msa0425810:CDS 30.0%
GGAAGAAGAAAAACTTATTG+AGG - chr3_2:76208408-76208427 Msa0425810:CDS 30.0%
AGAAGAAAAACTTATTGAGG+AGG - chr3_2:76208411-76208430 Msa0425810:CDS 30.0%
GTAGCTAGAAATATCATATC+AGG - chr3_2:76208466-76208485 Msa0425810:CDS 30.0%
!!! ACTACTGTTTTAGCTATCTT+TGG - chr3_2:76208822-76208841 Msa0425810:intron 30.0%
GTATACAAAAGAAAAGAAGG+AGG - chr3_2:76208946-76208965 Msa0425810:CDS 30.0%
AAAAGAAAAGAAGGAGGTTA+TGG - chr3_2:76208952-76208971 Msa0425810:CDS 30.0%
TAATCATGTACAATCTCTTG+TGG + chr3_2:76209098-76209117 None:intergenic 30.0%
AAGAGATTGTACATGATTAG+CGG - chr3_2:76209099-76209118 Msa0425810:CDS 30.0%
! CTCTTTCATTTTACAATCAC+TGG + chr3_2:76209246-76209265 None:intergenic 30.0%
ATGTTCATCGTCATCCAAAA+TGG - chr3_2:76207289-76207308 Msa0425810:three_prime_UTR 35.0%
! ACGATTGTCTCTTTCCATTT+TGG + chr3_2:76207306-76207325 None:intergenic 35.0%
GGAAGAGGAAATAATGATGA+TGG + chr3_2:76207344-76207363 None:intergenic 35.0%
AGGATGAAAAAAGGTTTGTG+TGG + chr3_2:76207448-76207467 None:intergenic 35.0%
! ATTAATTTGACGGAAGAGAG+TGG + chr3_2:76207692-76207711 None:intergenic 35.0%
TTCCGTCAAATTAATCATCC+AGG - chr3_2:76207697-76207716 Msa0425810:CDS 35.0%
TCCGTCAAATTAATCATCCA+GGG - chr3_2:76207698-76207717 Msa0425810:CDS 35.0%
! ACCCTGGATGATTAATTTGA+CGG + chr3_2:76207702-76207721 None:intergenic 35.0%
!! ATACCTGCATATTTTTACCC+TGG + chr3_2:76207718-76207737 None:intergenic 35.0%
!! CTTTTGTTGTAAACCTAGGA+TGG - chr3_2:76208100-76208119 Msa0425810:intron 35.0%
! ACTTTGTTTACAAAGAGGCA+TGG - chr3_2:76208172-76208191 Msa0425810:intron 35.0%
! CTTTGTTTACAAAGAGGCAT+GGG - chr3_2:76208173-76208192 Msa0425810:intron 35.0%
! TTTGTTTACAAAGAGGCATG+GGG - chr3_2:76208174-76208193 Msa0425810:intron 35.0%
TACCTATGCGAGTATAGATT+TGG - chr3_2:76208225-76208244 Msa0425810:intron 35.0%
! TAGGTTGAAATTTAGAGAGG+CGG - chr3_2:76208327-76208346 Msa0425810:CDS 35.0%
GAAAAACTTATTGAGGAGGT+TGG - chr3_2:76208415-76208434 Msa0425810:CDS 35.0%
ATTGCTTCAAACACGGTTAA+AGG + chr3_2:76208736-76208755 None:intergenic 35.0%
! GCTTTTCGAAATGAAGAATC+TGG - chr3_2:76208790-76208809 Msa0425810:intron 35.0%
! AAGTGTACTTCCTTTGTTTC+AGG - chr3_2:76208910-76208929 Msa0425810:intron 35.0%
! AGTGTACTTCCTTTGTTTCA+GGG - chr3_2:76208911-76208930 Msa0425810:intron 35.0%
TATGGACTCATTATTCCCAA+AGG - chr3_2:76208970-76208989 Msa0425810:CDS 35.0%
CTCATTATTCCCAAAGGAAA+CGG - chr3_2:76208976-76208995 Msa0425810:CDS 35.0%
AAACGGTGAAGCAGATAAAT+TGG - chr3_2:76208993-76209012 Msa0425810:CDS 35.0%
AGATAAATTGGAGCCTATAG+TGG - chr3_2:76209005-76209024 Msa0425810:CDS 35.0%
TCCTTTCATTCTTGTAGAGA+GGG + chr3_2:76209048-76209067 None:intergenic 35.0%
TTCCTTTCATTCTTGTAGAG+AGG + chr3_2:76209049-76209068 None:intergenic 35.0%
TGAAATTCTAATGGAGACTC+TGG - chr3_2:76209160-76209179 Msa0425810:CDS 35.0%
GAAATTCTAATGGAGACTCT+GGG - chr3_2:76209161-76209180 Msa0425810:CDS 35.0%
AAATTCTAATGGAGACTCTG+GGG - chr3_2:76209162-76209181 Msa0425810:CDS 35.0%
ATGTTCATCGTCATCCAAAA+TGG - chr3_2:76207289-76207308 Msa0425810:three_prime_UTR 35.0%
! ACGATTGTCTCTTTCCATTT+TGG + chr3_2:76207306-76207325 None:intergenic 35.0%
GGAAGAGGAAATAATGATGA+TGG + chr3_2:76207344-76207363 None:intergenic 35.0%
AGGATGAAAAAAGGTTTGTG+TGG + chr3_2:76207448-76207467 None:intergenic 35.0%
! ATTAATTTGACGGAAGAGAG+TGG + chr3_2:76207692-76207711 None:intergenic 35.0%
TTCCGTCAAATTAATCATCC+AGG - chr3_2:76207697-76207716 Msa0425810:CDS 35.0%
TCCGTCAAATTAATCATCCA+GGG - chr3_2:76207698-76207717 Msa0425810:CDS 35.0%
! ACCCTGGATGATTAATTTGA+CGG + chr3_2:76207702-76207721 None:intergenic 35.0%
!! ATACCTGCATATTTTTACCC+TGG + chr3_2:76207718-76207737 None:intergenic 35.0%
!! CTTTTGTTGTAAACCTAGGA+TGG - chr3_2:76208100-76208119 Msa0425810:intron 35.0%
! ACTTTGTTTACAAAGAGGCA+TGG - chr3_2:76208172-76208191 Msa0425810:intron 35.0%
! CTTTGTTTACAAAGAGGCAT+GGG - chr3_2:76208173-76208192 Msa0425810:intron 35.0%
! TTTGTTTACAAAGAGGCATG+GGG - chr3_2:76208174-76208193 Msa0425810:intron 35.0%
TACCTATGCGAGTATAGATT+TGG - chr3_2:76208225-76208244 Msa0425810:intron 35.0%
! TAGGTTGAAATTTAGAGAGG+CGG - chr3_2:76208327-76208346 Msa0425810:CDS 35.0%
GAAAAACTTATTGAGGAGGT+TGG - chr3_2:76208415-76208434 Msa0425810:CDS 35.0%
ATTGCTTCAAACACGGTTAA+AGG + chr3_2:76208736-76208755 None:intergenic 35.0%
! GCTTTTCGAAATGAAGAATC+TGG - chr3_2:76208790-76208809 Msa0425810:intron 35.0%
! AAGTGTACTTCCTTTGTTTC+AGG - chr3_2:76208910-76208929 Msa0425810:intron 35.0%
! AGTGTACTTCCTTTGTTTCA+GGG - chr3_2:76208911-76208930 Msa0425810:intron 35.0%
TATGGACTCATTATTCCCAA+AGG - chr3_2:76208970-76208989 Msa0425810:CDS 35.0%
CTCATTATTCCCAAAGGAAA+CGG - chr3_2:76208976-76208995 Msa0425810:CDS 35.0%
AAACGGTGAAGCAGATAAAT+TGG - chr3_2:76208993-76209012 Msa0425810:CDS 35.0%
AGATAAATTGGAGCCTATAG+TGG - chr3_2:76209005-76209024 Msa0425810:CDS 35.0%
TCCTTTCATTCTTGTAGAGA+GGG + chr3_2:76209048-76209067 None:intergenic 35.0%
TTCCTTTCATTCTTGTAGAG+AGG + chr3_2:76209049-76209068 None:intergenic 35.0%
TGAAATTCTAATGGAGACTC+TGG - chr3_2:76209160-76209179 Msa0425810:CDS 35.0%
GAAATTCTAATGGAGACTCT+GGG - chr3_2:76209161-76209180 Msa0425810:CDS 35.0%
AAATTCTAATGGAGACTCTG+GGG - chr3_2:76209162-76209181 Msa0425810:CDS 35.0%
AAAGGTTTGTGTGGAAGTTG+AGG + chr3_2:76207439-76207458 None:intergenic 40.0%
AAGAGGAGGAGGATGAAAAA+AGG + chr3_2:76207457-76207476 None:intergenic 40.0%
TTTATGGAGGAAAGTAGAGG+AGG + chr3_2:76207518-76207537 None:intergenic 40.0%
GTCTTTATGGAGGAAAGTAG+AGG + chr3_2:76207521-76207540 None:intergenic 40.0%
TTCTCCTGTCAAGAATGTTG+TGG + chr3_2:76207555-76207574 None:intergenic 40.0%
ACAACATTCTTGACAGGAGA+AGG - chr3_2:76207554-76207573 Msa0425810:three_prime_UTR 40.0%
! TTTGGTTGTTGTTGTTGTGG+CGG + chr3_2:76207612-76207631 None:intergenic 40.0%
TCTCCGTTGTTTGTATGTCA+TGG - chr3_2:76207660-76207679 Msa0425810:CDS 40.0%
CTCCGTTGTTTGTATGTCAT+GGG - chr3_2:76207661-76207680 Msa0425810:CDS 40.0%
GTCCCATGACATACAAACAA+CGG + chr3_2:76207666-76207685 None:intergenic 40.0%
GTTGTTTGTATGTCATGGGA+CGG - chr3_2:76207665-76207684 Msa0425810:CDS 40.0%
CATCCAGGGTAAAAATATGC+AGG - chr3_2:76207712-76207731 Msa0425810:intron 40.0%
TTGAGTTCAGCTGAATGATG+CGG - chr3_2:76207911-76207930 Msa0425810:CDS 40.0%
! TGTAAACCTAGGATGGATTC+AGG - chr3_2:76208107-76208126 Msa0425810:intron 40.0%
! GTAAACCTAGGATGGATTCA+GGG - chr3_2:76208108-76208127 Msa0425810:intron 40.0%
CACCAAATCTATACTCGCAT+AGG + chr3_2:76208230-76208249 None:intergenic 40.0%
!! GAGTATAGATTTGGTGTCCT+CGG - chr3_2:76208234-76208253 Msa0425810:CDS 40.0%
ACCTATTAGATCCCTTCATG+TGG + chr3_2:76208312-76208331 None:intergenic 40.0%
TTTCTTCTTCCTCCTTCTGT+GGG + chr3_2:76208399-76208418 None:intergenic 40.0%
! TTTTCTTCTTCCTCCTTCTG+TGG + chr3_2:76208400-76208419 None:intergenic 40.0%
!! AGGCTGTTTTACAGGTTGTT+CGG - chr3_2:76208689-76208708 Msa0425810:CDS 40.0%
CTGGTCAATTGCTTCAAACA+CGG + chr3_2:76208743-76208762 None:intergenic 40.0%
! GTTTGAAGCAATTGACCAGT+TGG - chr3_2:76208744-76208763 Msa0425810:intron 40.0%
AGCAATTGACCAGTTGGAAA+TGG - chr3_2:76208750-76208769 Msa0425810:intron 40.0%
! GTGTACTTCCTTTGTTTCAG+GGG - chr3_2:76208912-76208931 Msa0425810:intron 40.0%
ATTAACCTCCCCTGAAACAA+AGG + chr3_2:76208923-76208942 None:intergenic 40.0%
ACCCTCTCTACAAGAATGAA+AGG - chr3_2:76209044-76209063 Msa0425810:CDS 40.0%
AAAGCAGACAACATTGTCAG+AGG + chr3_2:76209315-76209334 None:intergenic 40.0%
AAAGGTTTGTGTGGAAGTTG+AGG + chr3_2:76207439-76207458 None:intergenic 40.0%
AAGAGGAGGAGGATGAAAAA+AGG + chr3_2:76207457-76207476 None:intergenic 40.0%
TTTATGGAGGAAAGTAGAGG+AGG + chr3_2:76207518-76207537 None:intergenic 40.0%
GTCTTTATGGAGGAAAGTAG+AGG + chr3_2:76207521-76207540 None:intergenic 40.0%
TTCTCCTGTCAAGAATGTTG+TGG + chr3_2:76207555-76207574 None:intergenic 40.0%
ACAACATTCTTGACAGGAGA+AGG - chr3_2:76207554-76207573 Msa0425810:three_prime_UTR 40.0%
! TTTGGTTGTTGTTGTTGTGG+CGG + chr3_2:76207612-76207631 None:intergenic 40.0%
TCTCCGTTGTTTGTATGTCA+TGG - chr3_2:76207660-76207679 Msa0425810:CDS 40.0%
CTCCGTTGTTTGTATGTCAT+GGG - chr3_2:76207661-76207680 Msa0425810:CDS 40.0%
GTCCCATGACATACAAACAA+CGG + chr3_2:76207666-76207685 None:intergenic 40.0%
GTTGTTTGTATGTCATGGGA+CGG - chr3_2:76207665-76207684 Msa0425810:CDS 40.0%
CATCCAGGGTAAAAATATGC+AGG - chr3_2:76207712-76207731 Msa0425810:intron 40.0%
TTGAGTTCAGCTGAATGATG+CGG - chr3_2:76207911-76207930 Msa0425810:CDS 40.0%
! TGTAAACCTAGGATGGATTC+AGG - chr3_2:76208107-76208126 Msa0425810:intron 40.0%
! GTAAACCTAGGATGGATTCA+GGG - chr3_2:76208108-76208127 Msa0425810:intron 40.0%
CACCAAATCTATACTCGCAT+AGG + chr3_2:76208230-76208249 None:intergenic 40.0%
!! GAGTATAGATTTGGTGTCCT+CGG - chr3_2:76208234-76208253 Msa0425810:CDS 40.0%
ACCTATTAGATCCCTTCATG+TGG + chr3_2:76208312-76208331 None:intergenic 40.0%
TTTCTTCTTCCTCCTTCTGT+GGG + chr3_2:76208399-76208418 None:intergenic 40.0%
! TTTTCTTCTTCCTCCTTCTG+TGG + chr3_2:76208400-76208419 None:intergenic 40.0%
!! AGGCTGTTTTACAGGTTGTT+CGG - chr3_2:76208689-76208708 Msa0425810:CDS 40.0%
CTGGTCAATTGCTTCAAACA+CGG + chr3_2:76208743-76208762 None:intergenic 40.0%
! GTTTGAAGCAATTGACCAGT+TGG - chr3_2:76208744-76208763 Msa0425810:intron 40.0%
AGCAATTGACCAGTTGGAAA+TGG - chr3_2:76208750-76208769 Msa0425810:intron 40.0%
! GTGTACTTCCTTTGTTTCAG+GGG - chr3_2:76208912-76208931 Msa0425810:intron 40.0%
ATTAACCTCCCCTGAAACAA+AGG + chr3_2:76208923-76208942 None:intergenic 40.0%
ACCCTCTCTACAAGAATGAA+AGG - chr3_2:76209044-76209063 Msa0425810:CDS 40.0%
AAAGCAGACAACATTGTCAG+AGG + chr3_2:76209315-76209334 None:intergenic 40.0%
ATTCAACTGTGTCTCACACG+CGG + chr3_2:76207271-76207290 None:intergenic 45.0%
! GAGGAAGAGAGAGTACAGAA+AGG + chr3_2:76207499-76207518 None:intergenic 45.0%
CCTGTCAAGAATGTTGTGGA+GGG + chr3_2:76207551-76207570 None:intergenic 45.0%
TCCTGTCAAGAATGTTGTGG+AGG + chr3_2:76207552-76207571 None:intergenic 45.0%
ACATTCTTGACAGGAGAAGG+AGG - chr3_2:76207557-76207576 Msa0425810:three_prime_UTR 45.0%
! GCGTTTGGTTGTTGTTGTTG+TGG + chr3_2:76207615-76207634 None:intergenic 45.0%
GATGTGAGACTATCTACTCG+TGG - chr3_2:76208002-76208021 Msa0425810:intron 45.0%
CAGCTTTCTTTGAATGACCG+AGG + chr3_2:76208254-76208273 None:intergenic 45.0%
GCCACATGAAGGGATCTAAT+AGG - chr3_2:76208308-76208327 Msa0425810:CDS 45.0%
GGTATTGCCATTACCCACAA+AGG - chr3_2:76208348-76208367 Msa0425810:CDS 45.0%
TCCTCATCCTTTGTGGGTAA+TGG + chr3_2:76208358-76208377 None:intergenic 45.0%
ATTACCCACAAAGGATGAGG+AGG - chr3_2:76208357-76208376 Msa0425810:CDS 45.0%
TCATCCTCCTCATCCTTTGT+GGG + chr3_2:76208364-76208383 None:intergenic 45.0%
TTCATCCTCCTCATCCTTTG+TGG + chr3_2:76208365-76208384 None:intergenic 45.0%
AACTGAAATCTCCCCACAGA+AGG - chr3_2:76208384-76208403 Msa0425810:CDS 45.0%
TTCTTCTTCCTCCTTCTGTG+GGG + chr3_2:76208398-76208417 None:intergenic 45.0%
ACTGGCGTTAGTGCAATGTA+AGG + chr3_2:76208665-76208684 None:intergenic 45.0%
GCTTCAAACACGGTTAAAGG+AGG + chr3_2:76208733-76208752 None:intergenic 45.0%
CATGAGCAACCATTTCCAAC+TGG + chr3_2:76208762-76208781 None:intergenic 45.0%
! TACTTCCTTTGTTTCAGGGG+AGG - chr3_2:76208915-76208934 Msa0425810:intron 45.0%
TCTGCTTCACCGTTTCCTTT+GGG + chr3_2:76208988-76209007 None:intergenic 45.0%
ATCTGCTTCACCGTTTCCTT+TGG + chr3_2:76208989-76209008 None:intergenic 45.0%
! TTAGCCGGTTCAACCACTAT+AGG + chr3_2:76209021-76209040 None:intergenic 45.0%
TGTAGAGAGGGTTCTTTAGC+CGG + chr3_2:76209036-76209055 None:intergenic 45.0%
GTTATGTGCAGCACACTCAA+TGG + chr3_2:76209274-76209293 None:intergenic 45.0%
ATTCAACTGTGTCTCACACG+CGG + chr3_2:76207271-76207290 None:intergenic 45.0%
! GAGGAAGAGAGAGTACAGAA+AGG + chr3_2:76207499-76207518 None:intergenic 45.0%
CCTGTCAAGAATGTTGTGGA+GGG + chr3_2:76207551-76207570 None:intergenic 45.0%
TCCTGTCAAGAATGTTGTGG+AGG + chr3_2:76207552-76207571 None:intergenic 45.0%
ACATTCTTGACAGGAGAAGG+AGG - chr3_2:76207557-76207576 Msa0425810:three_prime_UTR 45.0%
! GCGTTTGGTTGTTGTTGTTG+TGG + chr3_2:76207615-76207634 None:intergenic 45.0%
GATGTGAGACTATCTACTCG+TGG - chr3_2:76208002-76208021 Msa0425810:intron 45.0%
CAGCTTTCTTTGAATGACCG+AGG + chr3_2:76208254-76208273 None:intergenic 45.0%
GCCACATGAAGGGATCTAAT+AGG - chr3_2:76208308-76208327 Msa0425810:CDS 45.0%
GGTATTGCCATTACCCACAA+AGG - chr3_2:76208348-76208367 Msa0425810:CDS 45.0%
TCCTCATCCTTTGTGGGTAA+TGG + chr3_2:76208358-76208377 None:intergenic 45.0%
ATTACCCACAAAGGATGAGG+AGG - chr3_2:76208357-76208376 Msa0425810:CDS 45.0%
TCATCCTCCTCATCCTTTGT+GGG + chr3_2:76208364-76208383 None:intergenic 45.0%
TTCATCCTCCTCATCCTTTG+TGG + chr3_2:76208365-76208384 None:intergenic 45.0%
AACTGAAATCTCCCCACAGA+AGG - chr3_2:76208384-76208403 Msa0425810:CDS 45.0%
TTCTTCTTCCTCCTTCTGTG+GGG + chr3_2:76208398-76208417 None:intergenic 45.0%
ACTGGCGTTAGTGCAATGTA+AGG + chr3_2:76208665-76208684 None:intergenic 45.0%
GCTTCAAACACGGTTAAAGG+AGG + chr3_2:76208733-76208752 None:intergenic 45.0%
CATGAGCAACCATTTCCAAC+TGG + chr3_2:76208762-76208781 None:intergenic 45.0%
! TACTTCCTTTGTTTCAGGGG+AGG - chr3_2:76208915-76208934 Msa0425810:intron 45.0%
TCTGCTTCACCGTTTCCTTT+GGG + chr3_2:76208988-76209007 None:intergenic 45.0%
ATCTGCTTCACCGTTTCCTT+TGG + chr3_2:76208989-76209008 None:intergenic 45.0%
! TTAGCCGGTTCAACCACTAT+AGG + chr3_2:76209021-76209040 None:intergenic 45.0%
TGTAGAGAGGGTTCTTTAGC+CGG + chr3_2:76209036-76209055 None:intergenic 45.0%
GTTATGTGCAGCACACTCAA+TGG + chr3_2:76209274-76209293 None:intergenic 45.0%
TTCAACTGTGTCTCACACGC+GGG + chr3_2:76207270-76207289 None:intergenic 50.0%
AGAGGAAGAAGAAGAGGAGG+AGG + chr3_2:76207468-76207487 None:intergenic 50.0%
CGTAGAGGAAGAAGAAGAGG+AGG + chr3_2:76207471-76207490 None:intergenic 50.0%
CCTCTTCTTCTTCCTCTACG+CGG - chr3_2:76207471-76207490 Msa0425810:three_prime_UTR 50.0%
!! GGGTGACTTGGTCTTTATGG+AGG + chr3_2:76207531-76207550 None:intergenic 50.0%
!! GGAGGGTGACTTGGTCTTTA+TGG + chr3_2:76207534-76207553 None:intergenic 50.0%
GAATGTTGTGGAGGGTGACT+TGG + chr3_2:76207543-76207562 None:intergenic 50.0%
CCCTCCACAACATTCTTGAC+AGG - chr3_2:76207548-76207567 Msa0425810:three_prime_UTR 50.0%
ACAACAACAACCAAACGCCG+CGG - chr3_2:76207617-76207636 Msa0425810:CDS 50.0%
ACAGCACGTAGAGGAGAAAG+TGG - chr3_2:76207938-76207957 Msa0425810:CDS 50.0%
CAGCACGTAGAGGAGAAAGT+GGG - chr3_2:76207939-76207958 Msa0425810:intron 50.0%
AGCACGTAGAGGAGAAAGTG+GGG - chr3_2:76207940-76207959 Msa0425810:intron 50.0%
GTGAGACTATCTACTCGTGG+TGG - chr3_2:76208005-76208024 Msa0425810:intron 50.0%
AGACTATCTACTCGTGGTGG+AGG - chr3_2:76208008-76208027 Msa0425810:intron 50.0%
! ACTCGTGGTGGAGGAGAATT+TGG - chr3_2:76208017-76208036 Msa0425810:intron 50.0%
ACCTAGAACACGTAGATGCG+AGG - chr3_2:76208046-76208065 Msa0425810:intron 50.0%
ACCTCGCATCTACGTGTTCT+AGG + chr3_2:76208050-76208069 None:intergenic 50.0%
CAAGACCCTGAATCCATCCT+AGG + chr3_2:76208116-76208135 None:intergenic 50.0%
! GTTTACAAAGAGGCATGGGG+TGG - chr3_2:76208177-76208196 Msa0425810:intron 50.0%
TGATCATGGTCGCCACATGA+AGG - chr3_2:76208297-76208316 Msa0425810:CDS 50.0%
GATCATGGTCGCCACATGAA+GGG - chr3_2:76208298-76208317 Msa0425810:CDS 50.0%
GCCATTACCCACAAAGGATG+AGG - chr3_2:76208354-76208373 Msa0425810:CDS 50.0%
TGAAATCTCCCCACAGAAGG+AGG - chr3_2:76208387-76208406 Msa0425810:CDS 50.0%
CTGTAAAACAGCCTCGCAAC+TGG + chr3_2:76208683-76208702 None:intergenic 50.0%
!! CAGTTGCGAGGCTGTTTTAC+AGG - chr3_2:76208681-76208700 Msa0425810:CDS 50.0%
GGAGCCTATAGTGGTTGAAC+CGG - chr3_2:76209014-76209033 Msa0425810:CDS 50.0%
TTCAACTGTGTCTCACACGC+GGG + chr3_2:76207270-76207289 None:intergenic 50.0%
AGAGGAAGAAGAAGAGGAGG+AGG + chr3_2:76207468-76207487 None:intergenic 50.0%
CGTAGAGGAAGAAGAAGAGG+AGG + chr3_2:76207471-76207490 None:intergenic 50.0%
CCTCTTCTTCTTCCTCTACG+CGG - chr3_2:76207471-76207490 Msa0425810:three_prime_UTR 50.0%
!! GGGTGACTTGGTCTTTATGG+AGG + chr3_2:76207531-76207550 None:intergenic 50.0%
!! GGAGGGTGACTTGGTCTTTA+TGG + chr3_2:76207534-76207553 None:intergenic 50.0%
GAATGTTGTGGAGGGTGACT+TGG + chr3_2:76207543-76207562 None:intergenic 50.0%
CCCTCCACAACATTCTTGAC+AGG - chr3_2:76207548-76207567 Msa0425810:three_prime_UTR 50.0%
ACAACAACAACCAAACGCCG+CGG - chr3_2:76207617-76207636 Msa0425810:CDS 50.0%
ACAGCACGTAGAGGAGAAAG+TGG - chr3_2:76207938-76207957 Msa0425810:CDS 50.0%
CAGCACGTAGAGGAGAAAGT+GGG - chr3_2:76207939-76207958 Msa0425810:intron 50.0%
AGCACGTAGAGGAGAAAGTG+GGG - chr3_2:76207940-76207959 Msa0425810:intron 50.0%
GTGAGACTATCTACTCGTGG+TGG - chr3_2:76208005-76208024 Msa0425810:intron 50.0%
AGACTATCTACTCGTGGTGG+AGG - chr3_2:76208008-76208027 Msa0425810:intron 50.0%
! ACTCGTGGTGGAGGAGAATT+TGG - chr3_2:76208017-76208036 Msa0425810:intron 50.0%
ACCTAGAACACGTAGATGCG+AGG - chr3_2:76208046-76208065 Msa0425810:intron 50.0%
ACCTCGCATCTACGTGTTCT+AGG + chr3_2:76208050-76208069 None:intergenic 50.0%
CAAGACCCTGAATCCATCCT+AGG + chr3_2:76208116-76208135 None:intergenic 50.0%
! GTTTACAAAGAGGCATGGGG+TGG - chr3_2:76208177-76208196 Msa0425810:intron 50.0%
TGATCATGGTCGCCACATGA+AGG - chr3_2:76208297-76208316 Msa0425810:CDS 50.0%
GATCATGGTCGCCACATGAA+GGG - chr3_2:76208298-76208317 Msa0425810:CDS 50.0%
GCCATTACCCACAAAGGATG+AGG - chr3_2:76208354-76208373 Msa0425810:CDS 50.0%
TGAAATCTCCCCACAGAAGG+AGG - chr3_2:76208387-76208406 Msa0425810:CDS 50.0%
CTGTAAAACAGCCTCGCAAC+TGG + chr3_2:76208683-76208702 None:intergenic 50.0%
!! CAGTTGCGAGGCTGTTTTAC+AGG - chr3_2:76208681-76208700 Msa0425810:CDS 50.0%
GGAGCCTATAGTGGTTGAAC+CGG - chr3_2:76209014-76209033 Msa0425810:CDS 50.0%
CCGCGTAGAGGAAGAAGAAG+AGG + chr3_2:76207474-76207493 None:intergenic 55.0%
!! TACAGAAAGGCACCGCGTAG+AGG + chr3_2:76207486-76207505 None:intergenic 55.0%
TGCGGTGAAACAGCACGTAG+AGG - chr3_2:76207929-76207948 Msa0425810:CDS 55.0%
GGTGGAGGAGAATTTGGTCG+AGG - chr3_2:76208023-76208042 Msa0425810:intron 55.0%
TTGCACTAACGCCAGTTGCG+AGG - chr3_2:76208669-76208688 Msa0425810:CDS 55.0%
CCGCGTAGAGGAAGAAGAAG+AGG + chr3_2:76207474-76207493 None:intergenic 55.0%
!! TACAGAAAGGCACCGCGTAG+AGG + chr3_2:76207486-76207505 None:intergenic 55.0%
TGCGGTGAAACAGCACGTAG+AGG - chr3_2:76207929-76207948 Msa0425810:CDS 55.0%
GGTGGAGGAGAATTTGGTCG+AGG - chr3_2:76208023-76208042 Msa0425810:intron 55.0%
TTGCACTAACGCCAGTTGCG+AGG - chr3_2:76208669-76208688 Msa0425810:CDS 55.0%
ACAACAACCAAACGCCGCGG+CGG - chr3_2:76207620-76207639 Msa0425810:CDS 60.0%
! CAAAGAGGCATGGGGTGGTG+CGG - chr3_2:76208182-76208201 Msa0425810:intron 60.0%
! AAAGAGGCATGGGGTGGTGC+GGG - chr3_2:76208183-76208202 Msa0425810:intron 60.0%
ACAACAACCAAACGCCGCGG+CGG - chr3_2:76207620-76207639 Msa0425810:CDS 60.0%
! CAAAGAGGCATGGGGTGGTG+CGG - chr3_2:76208182-76208201 Msa0425810:intron 60.0%
! AAAGAGGCATGGGGTGGTGC+GGG - chr3_2:76208183-76208202 Msa0425810:intron 60.0%
! GGTGCGGGCTGAGGAACATG+CGG - chr3_2:76208198-76208217 Msa0425810:intron 65.0%
! GGTGCGGGCTGAGGAACATG+CGG - chr3_2:76208198-76208217 Msa0425810:intron 65.0%
AAACGCCGCGGCGGCAGCAG+CGG - chr3_2:76207629-76207648 Msa0425810:CDS 75.0%
! GCATGGGGTGGTGCGGGCTG+AGG - chr3_2:76208189-76208208 Msa0425810:intron 75.0%
AAACGCCGCGGCGGCAGCAG+CGG - chr3_2:76207629-76207648 Msa0425810:CDS 75.0%
! GCATGGGGTGGTGCGGGCTG+AGG - chr3_2:76208189-76208208 Msa0425810:intron 75.0%
! GCTGCTGCCGCCGCGGCGTT+TGG + chr3_2:76207630-76207649 None:intergenic 80.0%
! AACCGCCGCTGCTGCCGCCG+CGG + chr3_2:76207637-76207656 None:intergenic 80.0%
! GCTGCTGCCGCCGCGGCGTT+TGG + chr3_2:76207630-76207649 None:intergenic 80.0%
! AACCGCCGCTGCTGCCGCCG+CGG + chr3_2:76207637-76207656 None:intergenic 80.0%
! CGCCGCGGCGGCAGCAGCGG+CGG - chr3_2:76207632-76207651 Msa0425810:CDS 90.0%
! CGCCGCGGCGGCAGCAGCGG+CGG - chr3_2:76207632-76207651 Msa0425810:CDS 90.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 76207247 76209413 76207247 ID=Msa0425810;Name=Msa0425810
chr3_2 mRNA 76207247 76209413 76207247 ID=Msa0425810-mRNA-1;Parent=Msa0425810;Name=Msa0425810-mRNA-1;_AED=0.04;_eAED=0.04;_QI=172|1|1|1|1|1|5|351|321
chr3_2 exon 76207247 76207728 76207247 ID=Msa0425810-mRNA-1:exon:19652;Parent=Msa0425810-mRNA-1
chr3_2 exon 76207849 76207957 76207849 ID=Msa0425810-mRNA-1:exon:19651;Parent=Msa0425810-mRNA-1
chr3_2 exon 76208228 76208491 76208228 ID=Msa0425810-mRNA-1:exon:19650;Parent=Msa0425810-mRNA-1
chr3_2 exon 76208593 76208739 76208593 ID=Msa0425810-mRNA-1:exon:19649;Parent=Msa0425810-mRNA-1
chr3_2 exon 76208927 76209413 76208927 ID=Msa0425810-mRNA-1:exon:19648;Parent=Msa0425810-mRNA-1
chr3_2 five_prime_UTR 76209242 76209413 76209242 ID=Msa0425810-mRNA-1:five_prime_utr;Parent=Msa0425810-mRNA-1
chr3_2 CDS 76208927 76209241 76208927 ID=Msa0425810-mRNA-1:cds;Parent=Msa0425810-mRNA-1
chr3_2 CDS 76208593 76208739 76208593 ID=Msa0425810-mRNA-1:cds;Parent=Msa0425810-mRNA-1
chr3_2 CDS 76208228 76208491 76208228 ID=Msa0425810-mRNA-1:cds;Parent=Msa0425810-mRNA-1
chr3_2 CDS 76207849 76207957 76207849 ID=Msa0425810-mRNA-1:cds;Parent=Msa0425810-mRNA-1
chr3_2 CDS 76207598 76207728 76207598 ID=Msa0425810-mRNA-1:cds;Parent=Msa0425810-mRNA-1
chr3_2 three_prime_UTR 76207247 76207597 76207247 ID=Msa0425810-mRNA-1:three_prime_utr;Parent=Msa0425810-mRNA-1
Gene Sequence

>Msa0425810

ATGTCAATGGCGACTCACCTCAACTTCCACACAAACCTTTTTTCATCCTCCTCCTCTTCTTCTTCCTCTACGCGGTGCCTTTCTGTACTCTCTCTTCCTCCTCTACTTTCCTCCATAAAGACCAAGTCACCCTCCACAACATTCTTGACAGGAGAAGGAGGCACATCACAGTTGCTGAAATTGAAGTATGCCGCCACAACAACAACAACCAAACGCCGCGGCGGCAGCAGCGGCGGTTCAGTCTCCGTTGTTTGTATGTCATGGGACGGTCCACTCTCTTCCGTCAAATTAATCATCCAGGGTAAAAATATGCAGCTGAATGATGCGGTGAAACAGCACGTAGAGGAGAAAGTGGGGAGAGCAGTTCAGAAGCACAGCTACTTAGTAAGAGAAGTTGATGTGAGACTATCTACTCGTGGTGGAGGAGAATTTGGTCGAGGACCTAGAACACGTAGATGCGAGGTTACTTTGTTTACAAAGAGGCATGGGGTGGTGCGGGCTGAGGAACATGCGGAAACTACCTATGCGAGTATAGATTTGGTGTCCTCGGTCATTCAAAGAAAGCTGAGAAAGATTAAGGAAAAAGAAACTGATCATGGTCGCCACATGAAGGGATCTAATAGGTTGAAATTTAGAGAGGCGGTATTGCCATTACCCACAAAGGATGAGGAGGATGAAACTGAAATCTCCCCACAGAAGGAGGAAGAAGAAAAACTTATTGAGGAGGTTGTTCGGACAAAATACTTTGACATGCCTCCTTTAACCGTGTTTGAAGCAATTGACCAGTTGGAAATGGTTGCTCATGACTTCTATGCTTTTCGAAATGAAGAATCTGGGGAGGTTAATATTGTATACAAAAGAAAAGAAGGAGGTTATGGACTCATTATTCCCAAAGGAAACGGTGAAGCAGATAAATTGGAGCCTATAGTGGTTGAACCGGCTAAAGAACCCTCTCTACAAGAATGA

Protein sequence

>Msa0425810

MSMATHLNFHTNLFSSSSSSSSSTRCLSVLSLPPLLSSIKTKSPSTTFLTGEGGTSQLLKLKYAATTTTTKRRGGSSGGSVSVVCMSWDGPLSSVKLIIQGKNMQLNDAVKQHVEEKVGRAVQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLFTKRHGVVRAEEHAETTYASIDLVSSVIQRKLRKIKEKETDHGRHMKGSNRLKFREAVLPLPTKDEEDETEISPQKEEEEKLIEEVVRTKYFDMPPLTVFEAIDQLEMVAHDFYAFRNEESGEVNIVYKRKEGGYGLIIPKGNGEADKLEPIVVEPAKEPSLQE*