Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0444350 | XP_003598688.1 | 98.851 | 87 | 1 | 0 | 63 | 149 | 1 | 87 | 1.67e-57 | 184 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0444350 | sp|P58728|SF3BB_ARATH | 90.805 | 87 | 8 | 0 | 63 | 149 | 1 | 87 | 3.97e-56 | 173 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0444350 | G7IW51 | 98.851 | 87 | 1 | 0 | 63 | 149 | 1 | 87 | 7.96e-58 | 184 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0008410 | Msa0444350 | 0.813233 | 2.838741e-51 | -8.615850e-47 |
| Msa0029260 | Msa0444350 | 0.804023 | 2.636030e-49 | -8.615850e-47 |
| Msa0032260 | Msa0444350 | 0.802858 | 4.595491e-49 | -8.615850e-47 |
| Msa0046740 | Msa0444350 | 0.818739 | 1.674826e-52 | -8.615850e-47 |
| Msa0064350 | Msa0444350 | 0.835902 | 1.280594e-56 | -8.615850e-47 |
| Msa0064380 | Msa0444350 | 0.807500 | 4.903477e-50 | -8.615850e-47 |
| Msa0101690 | Msa0444350 | 0.802906 | 4.492700e-49 | -8.615850e-47 |
| Msa0115990 | Msa0444350 | 0.820892 | 5.393688e-53 | -8.615850e-47 |
| Msa0145520 | Msa0444350 | 0.804617 | 1.982083e-49 | -8.615850e-47 |
| Msa0169300 | Msa0444350 | 0.805836 | 1.101444e-49 | -8.615850e-47 |
| Msa0191050 | Msa0444350 | 0.830156 | 3.441872e-55 | -8.615850e-47 |
| Msa0199690 | Msa0444350 | 0.815930 | 7.182799e-52 | -8.615850e-47 |
| Msa0199880 | Msa0444350 | 0.811398 | 7.142319e-51 | -8.615850e-47 |
| Msa0233350 | Msa0444350 | 0.829423 | 5.191452e-55 | -8.615850e-47 |
| Msa0366890 | Msa0444350 | 0.804765 | 1.846550e-49 | -8.615850e-47 |
| Msa0387730 | Msa0444350 | 0.800843 | 1.191535e-48 | -8.615850e-47 |
| Msa0414800 | Msa0444350 | 0.820720 | 5.907720e-53 | -8.615850e-47 |
| Msa0444350 | Msa0481480 | 0.826389 | 2.786157e-54 | -8.615850e-47 |
| Msa0444350 | Msa0521050 | 0.812503 | 4.103555e-51 | -8.615850e-47 |
| Msa0444350 | Msa0552810 | 0.821316 | 4.307104e-53 | -8.615850e-47 |
| Msa0444350 | Msa0581070 | 0.804921 | 1.712429e-49 | -8.615850e-47 |
| Msa0444350 | Msa0626010 | 0.813441 | 2.555888e-51 | -8.615850e-47 |
| Msa0444350 | Msa0650920 | 0.801018 | 1.097505e-48 | -8.615850e-47 |
| Msa0444350 | Msa0663900 | 0.805565 | 1.255661e-49 | -8.615850e-47 |
| Msa0444350 | Msa0687630 | 0.808228 | 3.433230e-50 | -8.615850e-47 |
| Msa0444350 | Msa0690150 | 0.801910 | 7.203589e-49 | -8.615850e-47 |
| Msa0444350 | Msa0692840 | 0.857297 | 1.797138e-62 | -8.615850e-47 |
| Msa0444350 | Msa0692940 | 0.831916 | 1.272574e-55 | -8.615850e-47 |
| Msa0444350 | Msa0709500 | 0.801182 | 1.016075e-48 | -8.615850e-47 |
| Msa0444350 | Msa0797750 | 0.821705 | 3.503494e-53 | -8.615850e-47 |
| Msa0444350 | Msa0842830 | 0.806884 | 6.622661e-50 | -8.615850e-47 |
| Msa0444350 | Msa0968590 | 0.815435 | 9.259110e-52 | -8.615850e-47 |
| Msa0444350 | Msa1126510 | 0.818237 | 2.176340e-52 | -8.615850e-47 |
| Msa0444350 | Msa1126770 | 0.809340 | 1.986459e-50 | -8.615850e-47 |
| Msa0444350 | Msa1134110 | 0.800126 | 1.668261e-48 | -8.615850e-47 |
| Msa0444350 | Msa1166860 | 0.809901 | 1.504418e-50 | -8.615850e-47 |
| Msa0444350 | Msa1184370 | 0.804415 | 2.184515e-49 | -8.615850e-47 |
| Msa0444350 | Msa1207270 | 0.804645 | 1.955855e-49 | -8.615850e-47 |
| Msa0444350 | Msa1239910 | 0.812036 | 5.188021e-51 | -8.615850e-47 |
| Msa0444350 | Msa1251160 | 0.812594 | 3.919467e-51 | -8.615850e-47 |
| Msa0444350 | Msa1254710 | 0.803995 | 2.670952e-49 | -8.615850e-47 |
| Msa0444350 | Msa1255040 | -0.817296 | 3.549788e-52 | -8.615850e-47 |
| Msa0444350 | Msa1257510 | 0.822101 | 2.836869e-53 | -8.615850e-47 |
| Msa0444350 | Msa1267430 | 0.818174 | 2.249001e-52 | -8.615850e-47 |
| Msa0444350 | Msa1283170 | 0.821076 | 4.892409e-53 | -8.615850e-47 |
| Msa0444350 | Msa1295490 | -0.803162 | 3.975426e-49 | -8.615850e-47 |
| Msa0444350 | Msa1304820 | 0.826533 | 2.575057e-54 | -8.615850e-47 |
| Msa0444350 | Msa1305710 | 0.826799 | 2.224839e-54 | -8.615850e-47 |
| Msa0444350 | Msa1307950 | 0.802038 | 6.781908e-49 | -8.615850e-47 |
| Msa0444350 | Msa1345450 | 0.807582 | 4.710299e-50 | -8.615850e-47 |
| Msa0444350 | Msa1367590 | 0.807409 | 5.125557e-50 | -8.615850e-47 |
| Msa0444350 | Msa1367880 | 0.801628 | 8.230981e-49 | -8.615850e-47 |
| Msa0444350 | Msa1393740 | 0.807210 | 5.648325e-50 | -8.615850e-47 |
| Msa0444350 | Msa1404190 | 0.801257 | 9.803908e-49 | -8.615850e-47 |
| Msa0444350 | Msa1461280 | 0.802390 | 5.740640e-49 | -8.615850e-47 |
| Msa0444350 | Msa1465080 | 0.816841 | 4.492753e-52 | -8.615850e-47 |
| Msa0271810 | Msa0444350 | 0.802596 | 5.205520e-49 | -8.615850e-47 |
| Msa0300120 | Msa0444350 | 0.813189 | 2.902700e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0444350 | MtrunA17_Chr3g0084311 | 98.851 | 87 | 1 | 0 | 63 | 149 | 1 | 87 | 1.53e-61 | 184 |
| Msa0444350 | MtrunA17_Chr3g0084301 | 98.851 | 87 | 1 | 0 | 63 | 149 | 1 | 87 | 1.53e-61 | 184 |
| Msa0444350 | MtrunA17_Chr8g0364261 | 98.851 | 87 | 1 | 0 | 63 | 149 | 1 | 87 | 5.97e-61 | 182 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0444350 | AT4G14342.1 | 90.805 | 87 | 8 | 0 | 63 | 149 | 1 | 87 | 4.03e-57 | 173 |
| Msa0444350 | AT3G23325.1 | 88.506 | 87 | 10 | 0 | 63 | 149 | 1 | 87 | 4.50e-56 | 170 |
| Msa0444350 | AT4G14342.2 | 86.250 | 80 | 11 | 0 | 63 | 142 | 1 | 80 | 2.91e-48 | 151 |
Find 39 sgRNAs with CRISPR-Local
Find 259 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTATTCTTCTTCTCTTTC+AGG | 0.116966 | 3_3:-17269635 | None:intergenic |
| GATAGCTATGCTTCGTATAT+TGG | 0.282004 | 3_3:+17267333 | Msa0444350:CDS |
| TACTAATATGGAGGAGTATA+TGG | 0.312419 | 3_3:+17265804 | None:intergenic |
| TGTTGGAGATTAGTCTAAAC+AGG | 0.316640 | 3_3:+17269868 | Msa0444350:three_prime_UTR |
| TTGCAAATAAACATCATATA+CGG | 0.317171 | 3_3:+17265832 | Msa0444350:CDS |
| TACTTTAGTAGCATAGAAAT+AGG | 0.321750 | 3_3:+17269909 | Msa0444350:three_prime_UTR |
| GGATGAACAGTGCTGCGATT+TGG | 0.341196 | 3_3:-17265938 | None:intergenic |
| GATGAACAGTGCTGCGATTT+GGG | 0.341634 | 3_3:-17265937 | None:intergenic |
| TTGGGAAGAACAGAGGGATT+TGG | 0.362579 | 3_3:-17265919 | None:intergenic |
| ATTGCTCAAAACGAATCTAT+TGG | 0.369668 | 3_3:+17267384 | Msa0444350:CDS |
| TAGAAAAGTAAGAAAGTAAA+GGG | 0.419141 | 3_3:-17267362 | None:intergenic |
| GCAATATGCAGGCGAGTGAT+AGG | 0.420071 | 3_3:+17267211 | Msa0444350:CDS |
| CAAGCTAAATATGTTGGAAC+TGG | 0.450379 | 3_3:+17267264 | Msa0444350:CDS |
| CTCTCCAACAAGTCACGAAC+TGG | 0.452985 | 3_3:-17267188 | None:intergenic |
| ATAGAAAAGTAAGAAAGTAA+AGG | 0.454525 | 3_3:-17267363 | None:intergenic |
| CTGATATCAATAGATTTGAA+TGG | 0.473717 | 3_3:+17267292 | Msa0444350:CDS |
| AAGAAGAATAGAATTATCGT+TGG | 0.479576 | 3_3:+17269645 | Msa0444350:exon |
| AAATTATACAGTACAACATA+TGG | 0.481227 | 3_3:-17269698 | None:intergenic |
| AGCTTGCAGATGCTCGAGTT+GGG | 0.481702 | 3_3:-17267247 | None:intergenic |
| TGGAATTTGACTTACAGTTA+CGG | 0.491517 | 3_3:-17265959 | None:intergenic |
| AGTTCCAGTTCGTGACTTGT+TGG | 0.491647 | 3_3:+17267184 | Msa0444350:intron |
| GGATTTGGTTCAGCTTCAAT+CGG | 0.501068 | 3_3:-17265904 | None:intergenic |
| AGTAAGAAAGTAAAGGGTAA+TGG | 0.502423 | 3_3:-17267356 | None:intergenic |
| AGAAGAATAGAATTATCGTT+GGG | 0.512682 | 3_3:+17269646 | Msa0444350:exon |
| TAGCTTGCAGATGCTCGAGT+TGG | 0.512932 | 3_3:-17267248 | None:intergenic |
| CATCTGCAAGCTAAATATGT+TGG | 0.518362 | 3_3:+17267258 | Msa0444350:CDS |
| ATTATCGTTGGGATCATCAC+AGG | 0.545841 | 3_3:+17269657 | Msa0444350:three_prime_UTR |
| CAGGAGCAAGACCACATGGC+AGG | 0.553543 | 3_3:-17269616 | None:intergenic |
| CAGTTCGTGACTTGTTGGAG+AGG | 0.557579 | 3_3:+17267189 | Msa0444350:CDS |
| TGATATCAATAGATTTGAAT+GGG | 0.559675 | 3_3:+17267293 | Msa0444350:CDS |
| TTGTTGGAGAGGCAATATGC+AGG | 0.582739 | 3_3:+17267200 | Msa0444350:CDS |
| CTTTCAGGAGCAAGACCACA+TGG | 0.584496 | 3_3:-17269620 | None:intergenic |
| TGCGATTTGGGAAGAACAGA+GGG | 0.585828 | 3_3:-17265925 | None:intergenic |
| ATTAGTCTAAACAGGGAACT+CGG | 0.587842 | 3_3:+17269876 | Msa0444350:three_prime_UTR |
| ATCATCACAGGAGAGTTGAA+AGG | 0.629634 | 3_3:+17269669 | Msa0444350:three_prime_UTR |
| CAGAAAATGCTCCTGCCATG+TGG | 0.640622 | 3_3:+17269605 | Msa0444350:intron |
| CTGCGATTTGGGAAGAACAG+AGG | 0.656319 | 3_3:-17265926 | None:intergenic |
| TGTACTGTATAATTTGATCG+AGG | 0.659272 | 3_3:+17269706 | Msa0444350:three_prime_UTR |
| GTTGGAGATTAGTCTAAACA+GGG | 0.672427 | 3_3:+17269869 | Msa0444350:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAGATATATAACATTTA+AGG | - | chr3_3:17267130-17267149 | None:intergenic | 10.0% |
| !! | ATACTTAAGTAAATTAAAAT+TGG | - | chr3_3:17269033-17269052 | None:intergenic | 10.0% |
| !!! | TGAAAAGTGATTTTATTTTA+TGG | + | chr3_3:17266127-17266146 | Msa0444350:intron | 15.0% |
| !! | TAATTATGGTGATAAAATAT+AGG | + | chr3_3:17266369-17266388 | Msa0444350:intron | 15.0% |
| !! | TGTAAATTATATGAAAATTG+TGG | - | chr3_3:17266983-17267002 | None:intergenic | 15.0% |
| !!! | ATTAATATTTGAGTTTAAGA+AGG | + | chr3_3:17267958-17267977 | Msa0444350:intron | 15.0% |
| !!! | TTAATATTTGAGTTTAAGAA+GGG | + | chr3_3:17267959-17267978 | Msa0444350:intron | 15.0% |
| !! | ATGAATTTATATGCATATAT+GGG | + | chr3_3:17269107-17269126 | Msa0444350:intron | 15.0% |
| !!! | AAAGAAAAAAAAAAACCTTT+TGG | - | chr3_3:17269318-17269337 | None:intergenic | 15.0% |
| !! | AATAAAAATTGAATAAATCC+AGG | - | chr3_3:17269495-17269514 | None:intergenic | 15.0% |
| !!! | TGATTTATATGTTATCTTTT+TGG | - | chr3_3:17269949-17269968 | None:intergenic | 15.0% |
| !! | TTGCAAATAAACATCATATA+CGG | + | chr3_3:17265832-17265851 | Msa0444350:CDS | 20.0% |
| !!! | TGTTTTTATTAGCAAAATCA+GGG | - | chr3_3:17265870-17265889 | None:intergenic | 20.0% |
| !!! | ATGTTTTTATTAGCAAAATC+AGG | - | chr3_3:17265871-17265890 | None:intergenic | 20.0% |
| !!! | TGTTTTTACTATAACATGTT+AGG | + | chr3_3:17266073-17266092 | Msa0444350:intron | 20.0% |
| !!! | TTATTTTATGGAGATTTTGT+AGG | + | chr3_3:17266139-17266158 | Msa0444350:intron | 20.0% |
| !! | TTTATCACCATAATTATTCA+GGG | - | chr3_3:17266365-17266384 | None:intergenic | 20.0% |
| !!! | TTTTATCACCATAATTATTC+AGG | - | chr3_3:17266366-17266385 | None:intergenic | 20.0% |
| !! | GATTTATGTAAAAGAAAGAA+AGG | + | chr3_3:17266688-17266707 | Msa0444350:intron | 20.0% |
| !! | AATAACCAAATGAATTAACA+AGG | - | chr3_3:17266927-17266946 | None:intergenic | 20.0% |
| !! | TCATATAATTTACAGTTACT+TGG | + | chr3_3:17266989-17267008 | Msa0444350:intron | 20.0% |
| !! | TGATATCAATAGATTTGAAT+GGG | + | chr3_3:17267293-17267312 | Msa0444350:CDS | 20.0% |
| !! | TAGAAAAGTAAGAAAGTAAA+GGG | - | chr3_3:17267365-17267384 | None:intergenic | 20.0% |
| !! | ATAGAAAAGTAAGAAAGTAA+AGG | - | chr3_3:17267366-17267385 | None:intergenic | 20.0% |
| !!! | ATCCTATTATTTCTAAATCA+CGG | - | chr3_3:17267814-17267833 | None:intergenic | 20.0% |
| !!! | GTATTTTATTAGAAAGAATG+GGG | - | chr3_3:17267902-17267921 | None:intergenic | 20.0% |
| !!! | GGTATTTTATTAGAAAGAAT+GGG | - | chr3_3:17267903-17267922 | None:intergenic | 20.0% |
| !!! | TGGTATTTTATTAGAAAGAA+TGG | - | chr3_3:17267904-17267923 | None:intergenic | 20.0% |
| !!! | TTCAATTCTTTTCTTTGTTT+TGG | + | chr3_3:17268075-17268094 | Msa0444350:intron | 20.0% |
| !!! | AAATCAGATTTTGTTCAAAT+TGG | + | chr3_3:17268331-17268350 | Msa0444350:intron | 20.0% |
| !!! | AATCAGATTTTGTTCAAATT+GGG | + | chr3_3:17268332-17268351 | Msa0444350:intron | 20.0% |
| !!! | AGAAAACTAGTTTAGAAATA+TGG | + | chr3_3:17268492-17268511 | Msa0444350:intron | 20.0% |
| !!! | AGTTTAGAAATATGGTTTTT+TGG | + | chr3_3:17268500-17268519 | Msa0444350:intron | 20.0% |
| !! | TCTATAACATAATGTTCAAA+GGG | - | chr3_3:17268859-17268878 | None:intergenic | 20.0% |
| !! | AATTAAAATTGGTAAGCATA+AGG | - | chr3_3:17269022-17269041 | None:intergenic | 20.0% |
| !! | CATGAATTTATATGCATATA+TGG | + | chr3_3:17269106-17269125 | Msa0444350:intron | 20.0% |
| !!! | ATTGAGATTTTACACAAAAA+CGG | - | chr3_3:17269169-17269188 | None:intergenic | 20.0% |
| !! | TTGATGAAAAATTCTTAAGA+AGG | - | chr3_3:17269201-17269220 | None:intergenic | 20.0% |
| !!! | TATGGATTTTTATAATGTTG+AGG | - | chr3_3:17269231-17269250 | None:intergenic | 20.0% |
| !! | CAACATTATAAAAATCCATA+TGG | + | chr3_3:17269231-17269250 | Msa0444350:intron | 20.0% |
| !! | AATAAAAATTGAATAAACCC+AGG | - | chr3_3:17269416-17269435 | None:intergenic | 20.0% |
| !! | TTACTTGATTGATTGAAATA+TGG | + | chr3_3:17269441-17269460 | Msa0444350:intron | 20.0% |
| !!! | AAATTAGAATATAAAGTGCT+AGG | - | chr3_3:17269565-17269584 | None:intergenic | 20.0% |
| !! | AAATTATACAGTACAACATA+TGG | - | chr3_3:17269701-17269720 | None:intergenic | 20.0% |
| !!! | TTATATGTTATCTTTTTGGA+GGG | - | chr3_3:17269945-17269964 | None:intergenic | 20.0% |
| !!! | TTTATATGTTATCTTTTTGG+AGG | - | chr3_3:17269946-17269965 | None:intergenic | 20.0% |
| !! | TAGGTTGAATGTTAACAATA+AGG | + | chr3_3:17266388-17266407 | Msa0444350:intron | 25.0% |
| ! | TGTTAACAATAAGGAAAAGT+TGG | + | chr3_3:17266397-17266416 | Msa0444350:intron | 25.0% |
| ! | AAGAGATTTAAGAGAGAATA+TGG | + | chr3_3:17266462-17266481 | Msa0444350:intron | 25.0% |
| ! | TTTAGTGTAATTACATGTGT+CGG | + | chr3_3:17266566-17266585 | Msa0444350:intron | 25.0% |
| ! | TAGATCCTTGTTAATTCATT+TGG | + | chr3_3:17266919-17266938 | Msa0444350:intron | 25.0% |
| !!! | TTAGTACTAGTTTTGATCAA+CGG | + | chr3_3:17267050-17267069 | Msa0444350:intron | 25.0% |
| ! | CTGATATCAATAGATTTGAA+TGG | + | chr3_3:17267292-17267311 | Msa0444350:CDS | 25.0% |
| ! | AAAGAAAATAGTAACGATCT+AGG | - | chr3_3:17267478-17267497 | None:intergenic | 25.0% |
| ! | TCAAAACATAACATTGAACT+TGG | + | chr3_3:17267535-17267554 | Msa0444350:intron | 25.0% |
| !!! | AACTTTTTCAGACTCTTTTT+TGG | + | chr3_3:17268011-17268030 | Msa0444350:intron | 25.0% |
| ! | AAACTAGTGACAAAAATCTT+TGG | - | chr3_3:17268140-17268159 | None:intergenic | 25.0% |
| !!! | AGTTTTTGAGATTCTGATTA+GGG | + | chr3_3:17268404-17268423 | Msa0444350:intron | 25.0% |
| !!! | TTTTTTGGTTGTTAACCAAA+TGG | + | chr3_3:17268515-17268534 | Msa0444350:intron | 25.0% |
| ! | AGAAAAATCCTAAAAAGTCT+TGG | + | chr3_3:17268635-17268654 | Msa0444350:intron | 25.0% |
| !! | CCTTCTCTTAAAAATGTTTT+TGG | - | chr3_3:17268733-17268752 | None:intergenic | 25.0% |
| !!! | CCAAAAACATTTTTAAGAGA+AGG | + | chr3_3:17268730-17268749 | Msa0444350:intron | 25.0% |
| !! | TTAAACATGTTATTGGTAGT+GGG | - | chr3_3:17268768-17268787 | None:intergenic | 25.0% |
| ! | TACCAATAACATGTTTAAGA+AGG | + | chr3_3:17268770-17268789 | Msa0444350:intron | 25.0% |
| ! | AACCTTCTTAAACATGTTAT+TGG | - | chr3_3:17268775-17268794 | None:intergenic | 25.0% |
| ! | ATGTCTCATCTAATAATGAA+TGG | + | chr3_3:17268806-17268825 | Msa0444350:intron | 25.0% |
| !!! | TAATAATGAATGGATTGTGA+AGG | + | chr3_3:17268816-17268835 | Msa0444350:intron | 25.0% |
| ! | CTCTATAACATAATGTTCAA+AGG | - | chr3_3:17268860-17268879 | None:intergenic | 25.0% |
| !! | AAAATCCATATGGATTAAAG+TGG | + | chr3_3:17269241-17269260 | Msa0444350:intron | 25.0% |
| ! | AAAGTGGTGACAAAAATATT+TGG | + | chr3_3:17269257-17269276 | Msa0444350:intron | 25.0% |
| ! | AAGAAGAATAGAATTATCGT+TGG | + | chr3_3:17269645-17269664 | Msa0444350:exon | 25.0% |
| ! | AGAAGAATAGAATTATCGTT+GGG | + | chr3_3:17269646-17269665 | Msa0444350:exon | 25.0% |
| ! | TACTTTAGTAGCATAGAAAT+AGG | + | chr3_3:17269909-17269928 | Msa0444350:three_prime_UTR | 25.0% |
| ! | TGGAATTTGACTTACAGTTA+CGG | - | chr3_3:17265962-17265981 | None:intergenic | 30.0% |
| AACGGAAGAAAAGTGAAATT+TGG | - | chr3_3:17265982-17266001 | None:intergenic | 30.0% | |
| ! | TATGGAGATTTTGTAGGTTT+TGG | + | chr3_3:17266145-17266164 | Msa0444350:intron | 30.0% |
| !! | AAGCTGTTTTCATAAGTTCT+TGG | - | chr3_3:17266221-17266240 | None:intergenic | 30.0% |
| ATCCTTCTTAAAGGGTAAAT+GGG | - | chr3_3:17266314-17266333 | None:intergenic | 30.0% | |
| TATCCTTCTTAAAGGGTAAA+TGG | - | chr3_3:17266315-17266334 | None:intergenic | 30.0% | |
| TACATTCCAACTAACTACAT+CGG | - | chr3_3:17266857-17266876 | None:intergenic | 30.0% | |
| AGTAAGAAAGTAAAGGGTAA+TGG | - | chr3_3:17267359-17267378 | None:intergenic | 30.0% | |
| ATTGCTCAAAACGAATCTAT+TGG | + | chr3_3:17267384-17267403 | Msa0444350:CDS | 30.0% | |
| ACATAACATTGAACTTGGTT+AGG | + | chr3_3:17267540-17267559 | Msa0444350:intron | 30.0% | |
| GACCGTGATTTAGAAATAAT+AGG | + | chr3_3:17267809-17267828 | Msa0444350:intron | 30.0% | |
| AATAATAGGATACGATGAGA+AGG | + | chr3_3:17267823-17267842 | Msa0444350:intron | 30.0% | |
| AATACCAGATTTCTATCAGT+AGG | + | chr3_3:17267917-17267936 | Msa0444350:intron | 30.0% | |
| ATACCAGATTTCTATCAGTA+GGG | + | chr3_3:17267918-17267937 | Msa0444350:intron | 30.0% | |
| TGGTAACACTTCAATCAAAA+AGG | - | chr3_3:17268209-17268228 | None:intergenic | 30.0% | |
| GCTTAAGAGAGCTAATAATA+TGG | - | chr3_3:17268229-17268248 | None:intergenic | 30.0% | |
| ! | ATTATTAGCTCTCTTAAGCA+TGG | + | chr3_3:17268230-17268249 | Msa0444350:intron | 30.0% |
| TGTACAATTGTGTGATTGTA+TGG | - | chr3_3:17268277-17268296 | None:intergenic | 30.0% | |
| AATCGTTGAATTGAATGATC+TGG | + | chr3_3:17268371-17268390 | Msa0444350:intron | 30.0% | |
| !!! | GAGTTTTTGAGATTCTGATT+AGG | + | chr3_3:17268403-17268422 | Msa0444350:intron | 30.0% |
| !!! | GTTTTTGAGATTCTGATTAG+GGG | + | chr3_3:17268405-17268424 | Msa0444350:intron | 30.0% |
| !! | TTAGCTTGTTTCTATAGCTA+AGG | - | chr3_3:17268596-17268615 | None:intergenic | 30.0% |
| ! | GGATTTTTCTTTTATAGCGA+AGG | - | chr3_3:17268625-17268644 | None:intergenic | 30.0% |
| TCCTAAAAAGTCTTGGAAAT+AGG | + | chr3_3:17268642-17268661 | Msa0444350:intron | 30.0% | |
| ! | TCCTATTTCCAAGACTTTTT+AGG | - | chr3_3:17268646-17268665 | None:intergenic | 30.0% |
| !! | AAAAGAGAAAAGCATTGAAG+TGG | + | chr3_3:17268689-17268708 | Msa0444350:intron | 30.0% |
| CTTAAACATGTTATTGGTAG+TGG | - | chr3_3:17268769-17268788 | None:intergenic | 30.0% | |
| ACATTATGTTATAGAGCATG+AGG | + | chr3_3:17268864-17268883 | Msa0444350:intron | 30.0% | |
| CATTATGTTATAGAGCATGA+GGG | + | chr3_3:17268865-17268884 | Msa0444350:intron | 30.0% | |
| ! | GATTTTACACAAAAACGGAA+AGG | - | chr3_3:17269164-17269183 | None:intergenic | 30.0% |
| !!! | TTTTGGTTCTCCAAAGATTA+GGG | - | chr3_3:17269301-17269320 | None:intergenic | 30.0% |
| ! | AGGTGAGATTATAAAGTATC+AGG | - | chr3_3:17269475-17269494 | None:intergenic | 30.0% |
| TGATACTTTATAATCTCACC+TGG | + | chr3_3:17269474-17269493 | Msa0444350:intron | 30.0% | |
| TTCTATTCTTCTTCTCTTTC+AGG | - | chr3_3:17269638-17269657 | None:intergenic | 30.0% | |
| TGTACTGTATAATTTGATCG+AGG | + | chr3_3:17269706-17269725 | Msa0444350:three_prime_UTR | 30.0% | |
| !!! | CTTAACTTTGCCTGTTTTTA+TGG | + | chr3_3:17269777-17269796 | Msa0444350:three_prime_UTR | 30.0% |
| ! | GTACTTTTCATGAATTGTGT+TGG | + | chr3_3:17269851-17269870 | Msa0444350:three_prime_UTR | 30.0% |
| CGTGGCATAGAAAGTAAAAA+CGG | - | chr3_3:17266000-17266019 | None:intergenic | 35.0% | |
| ATGCCACGATTCAATCAAAT+AGG | + | chr3_3:17266012-17266031 | Msa0444350:intron | 35.0% | |
| TGCCACGATTCAATCAAATA+GGG | + | chr3_3:17266013-17266032 | Msa0444350:intron | 35.0% | |
| TACCCTATTTGATTGAATCG+TGG | - | chr3_3:17266018-17266037 | None:intergenic | 35.0% | |
| AGTTCTTGGCAAACAACTTA+TGG | - | chr3_3:17266207-17266226 | None:intergenic | 35.0% | |
| ! | TTCCCATTTACCCTTTAAGA+AGG | + | chr3_3:17266309-17266328 | Msa0444350:intron | 35.0% |
| GCTTTGGTATCCTTCTTAAA+GGG | - | chr3_3:17266322-17266341 | None:intergenic | 35.0% | |
| ! | AGCTTTGGTATCCTTCTTAA+AGG | - | chr3_3:17266323-17266342 | None:intergenic | 35.0% |
| TAATTATTCAGGGTTTGGCA+GGG | - | chr3_3:17266355-17266374 | None:intergenic | 35.0% | |
| ATAATTATTCAGGGTTTGGC+AGG | - | chr3_3:17266356-17266375 | None:intergenic | 35.0% | |
| TGCCAAACCCTGAATAATTA+TGG | + | chr3_3:17266355-17266374 | Msa0444350:intron | 35.0% | |
| CACCATAATTATTCAGGGTT+TGG | - | chr3_3:17266360-17266379 | None:intergenic | 35.0% | |
| ! | AAGAGATTGGTTGTGATAGA+GGG | + | chr3_3:17266437-17266456 | Msa0444350:intron | 35.0% |
| CTCAAATTATTAGCGATGTC+TGG | - | chr3_3:17266534-17266553 | None:intergenic | 35.0% | |
| !!! | GCATTTTTTTCTTCCCTGTT+TGG | + | chr3_3:17266785-17266804 | Msa0444350:intron | 35.0% |
| ! | TTTTTCTTCCCTGTTTGGTT+AGG | + | chr3_3:17266790-17266809 | Msa0444350:intron | 35.0% |
| CATCTGCAAGCTAAATATGT+TGG | + | chr3_3:17267258-17267277 | Msa0444350:CDS | 35.0% | |
| CAAGCTAAATATGTTGGAAC+TGG | + | chr3_3:17267264-17267283 | Msa0444350:CDS | 35.0% | |
| GATAGCTATGCTTCGTATAT+TGG | + | chr3_3:17267333-17267352 | Msa0444350:CDS | 35.0% | |
| TTGACACATCAACTTGTAGT+AGG | + | chr3_3:17267578-17267597 | Msa0444350:intron | 35.0% | |
| !!! | TATTTTGCTATTGCCTGCTA+TGG | - | chr3_3:17267667-17267686 | None:intergenic | 35.0% |
| AAGCGATTTGACAGAGAATT+GGG | + | chr3_3:17267854-17267873 | Msa0444350:intron | 35.0% | |
| AGATTTCTATCAGTAGGGAA+GGG | + | chr3_3:17267923-17267942 | Msa0444350:intron | 35.0% | |
| AAGAGTCTGAAAAAGTTCTG+AGG | - | chr3_3:17268008-17268027 | None:intergenic | 35.0% | |
| !!! | TCTTTTTTGGCACCACAATT+TGG | + | chr3_3:17268024-17268043 | Msa0444350:intron | 35.0% |
| !!! | CTTTTTTGGCACCACAATTT+GGG | + | chr3_3:17268025-17268044 | Msa0444350:intron | 35.0% |
| !!! | TTTTTTGGCACCACAATTTG+GGG | + | chr3_3:17268026-17268045 | Msa0444350:intron | 35.0% |
| TTCAAACAATCCCCAAATTG+TGG | - | chr3_3:17268039-17268058 | None:intergenic | 35.0% | |
| ! | CAGATTTTGTTCAAATTGGG+TGG | + | chr3_3:17268335-17268354 | Msa0444350:intron | 35.0% |
| TTCAATTCAACGATTGACAG+TGG | - | chr3_3:17268366-17268385 | None:intergenic | 35.0% | |
| TTGAATGATCTGGATCTTTC+TGG | + | chr3_3:17268381-17268400 | Msa0444350:intron | 35.0% | |
| ! | AAGAACCTGTTTTCTTCTTG+CGG | + | chr3_3:17268463-17268482 | Msa0444350:intron | 35.0% |
| ! | CATGAGAATTTGAAGCCATT+TGG | - | chr3_3:17268533-17268552 | None:intergenic | 35.0% |
| TCAAATTCTCATGTTGCTAC+TGG | + | chr3_3:17268540-17268559 | Msa0444350:intron | 35.0% | |
| !! | TTGTTTCTATAGCTAAGGAC+GGG | - | chr3_3:17268591-17268610 | None:intergenic | 35.0% |
| !! | CTTGTTTCTATAGCTAAGGA+CGG | - | chr3_3:17268592-17268611 | None:intergenic | 35.0% |
| ACATAATGTTCAAAGGGACT+GGG | - | chr3_3:17268853-17268872 | None:intergenic | 35.0% | |
| AACATAATGTTCAAAGGGAC+TGG | - | chr3_3:17268854-17268873 | None:intergenic | 35.0% | |
| TCTAGAAGAGATTGACGATT+AGG | + | chr3_3:17268906-17268925 | Msa0444350:intron | 35.0% | |
| TGTCACCACTTTAATCCATA+TGG | - | chr3_3:17269249-17269268 | None:intergenic | 35.0% | |
| GTGGTGACAAAAATATTTGG+AGG | + | chr3_3:17269260-17269279 | Msa0444350:intron | 35.0% | |
| !!! | CTTTTGGTTCTCCAAAGATT+AGG | - | chr3_3:17269302-17269321 | None:intergenic | 35.0% |
| ! | CTAATCTTTGGAGAACCAAA+AGG | + | chr3_3:17269300-17269319 | Msa0444350:intron | 35.0% |
| ! | ATTAGCTGTTGTTGTTAGTG+TGG | + | chr3_3:17269361-17269380 | Msa0444350:intron | 35.0% |
| ! | TTAGCTGTTGTTGTTAGTGT+GGG | + | chr3_3:17269362-17269381 | Msa0444350:intron | 35.0% |
| AGGAGTGATAAGGATGTAAT+GGG | - | chr3_3:17269396-17269415 | None:intergenic | 35.0% | |
| ATTACATCCTTATCACTCCT+GGG | + | chr3_3:17269396-17269415 | Msa0444350:intron | 35.0% | |
| !!! | CTTTGCCTGTTTTTATGGTA+TGG | + | chr3_3:17269782-17269801 | Msa0444350:three_prime_UTR | 35.0% |
| AAGCTCCATACCATAAAAAC+AGG | - | chr3_3:17269790-17269809 | None:intergenic | 35.0% | |
| !! | TGTTGGAGATTAGTCTAAAC+AGG | + | chr3_3:17269868-17269887 | Msa0444350:three_prime_UTR | 35.0% |
| !! | GTTGGAGATTAGTCTAAACA+GGG | + | chr3_3:17269869-17269888 | Msa0444350:three_prime_UTR | 35.0% |
| ! | ATTAGTCTAAACAGGGAACT+CGG | + | chr3_3:17269876-17269895 | Msa0444350:three_prime_UTR | 35.0% |
| ! | GGATTTGGTTCAGCTTCAAT+CGG | - | chr3_3:17265907-17265926 | None:intergenic | 40.0% |
| AATTATTCAGGGTTTGGCAG+GGG | - | chr3_3:17266354-17266373 | None:intergenic | 40.0% | |
| AGGAAAAGTTGGAGAAGTGA+AGG | + | chr3_3:17266408-17266427 | Msa0444350:intron | 40.0% | |
| GTGAAGGCTTAAGAAGAGAT+TGG | + | chr3_3:17266424-17266443 | Msa0444350:intron | 40.0% | |
| ! | GAAGAGATTGGTTGTGATAG+AGG | + | chr3_3:17266436-17266455 | Msa0444350:intron | 40.0% |
| GAAGCTATGAAGCACGAATA+CGG | + | chr3_3:17266505-17266524 | Msa0444350:intron | 40.0% | |
| ATGAGAGAAGTAGAGATGCT+AGG | + | chr3_3:17266741-17266760 | Msa0444350:intron | 40.0% | |
| ATTCCAACTAACTACATCGG+TGG | - | chr3_3:17266854-17266873 | None:intergenic | 40.0% | |
| TACTTGGTTCACACTTTGAG+AGG | + | chr3_3:17267005-17267024 | Msa0444350:intron | 40.0% | |
| ! | ACTTGGTTCACACTTTGAGA+GGG | + | chr3_3:17267006-17267025 | Msa0444350:intron | 40.0% |
| ! | ACAGCGTTACACTTTTATGC+AGG | + | chr3_3:17267410-17267429 | Msa0444350:CDS | 40.0% |
| AGCAGGCAATAGCAAAATAG+CGG | + | chr3_3:17267668-17267687 | Msa0444350:intron | 40.0% | |
| ! | GCAATAGCAAAATAGCGGAA+AGG | + | chr3_3:17267673-17267692 | Msa0444350:intron | 40.0% |
| ! | GCAAAATAGCGGAAAGGATT+AGG | + | chr3_3:17267679-17267698 | Msa0444350:intron | 40.0% |
| ! | CTAAAGCGTTTGCCACAAAT+AGG | + | chr3_3:17267716-17267735 | Msa0444350:intron | 40.0% |
| CAAATAACCGACCAGAGTTT+GGG | - | chr3_3:17267762-17267781 | None:intergenic | 40.0% | |
| TCTGGTCGGTTATTTGGAAA+TGG | + | chr3_3:17267766-17267785 | Msa0444350:intron | 40.0% | |
| CAAGCGATTTGACAGAGAAT+TGG | + | chr3_3:17267853-17267872 | Msa0444350:intron | 40.0% | |
| AGCGATTTGACAGAGAATTG+GGG | + | chr3_3:17267855-17267874 | Msa0444350:intron | 40.0% | |
| CTTCCCTACTGATAGAAATC+TGG | - | chr3_3:17267924-17267943 | None:intergenic | 40.0% | |
| CAGATTTCTATCAGTAGGGA+AGG | + | chr3_3:17267922-17267941 | Msa0444350:intron | 40.0% | |
| TGAGTTTAAGAAGGGAACAG+AGG | + | chr3_3:17267967-17267986 | Msa0444350:intron | 40.0% | |
| GAGTTTAAGAAGGGAACAGA+GGG | + | chr3_3:17267968-17267987 | Msa0444350:intron | 40.0% | |
| AGTTTAAGAAGGGAACAGAG+GGG | + | chr3_3:17267969-17267988 | Msa0444350:intron | 40.0% | |
| ! | TTTGAGATTCTGATTAGGGG+TGG | + | chr3_3:17268408-17268427 | Msa0444350:intron | 40.0% |
| ! | AGAACCTGTTTTCTTCTTGC+GGG | + | chr3_3:17268464-17268483 | Msa0444350:intron | 40.0% |
| !! | AGAGAAAAGCATTGAAGTGG+AGG | + | chr3_3:17268692-17268711 | Msa0444350:intron | 40.0% |
| !! | GAGAAAAGCATTGAAGTGGA+GGG | + | chr3_3:17268693-17268712 | Msa0444350:intron | 40.0% |
| TATGTTATAGAGCATGAGGG+TGG | + | chr3_3:17268868-17268887 | Msa0444350:intron | 40.0% | |
| ! | TCGTCAATCTCTTCTAGAGA+AGG | - | chr3_3:17268904-17268923 | None:intergenic | 40.0% |
| GATTGACGATTAGGTGTTCT+TGG | + | chr3_3:17268915-17268934 | Msa0444350:intron | 40.0% | |
| TGTAGTGACACCCTAATCTT+TGG | + | chr3_3:17269288-17269307 | Msa0444350:intron | 40.0% | |
| ! | TAGCTGTTGTTGTTAGTGTG+GGG | + | chr3_3:17269363-17269382 | Msa0444350:intron | 40.0% |
| CAGGAGTGATAAGGATGTAA+TGG | - | chr3_3:17269397-17269416 | None:intergenic | 40.0% | |
| CATTACATCCTTATCACTCC+TGG | + | chr3_3:17269395-17269414 | Msa0444350:intron | 40.0% | |
| GAATAAACCCAGGAGTGATA+AGG | - | chr3_3:17269406-17269425 | None:intergenic | 40.0% | |
| ATTATCGTTGGGATCATCAC+AGG | + | chr3_3:17269657-17269676 | Msa0444350:three_prime_UTR | 40.0% | |
| ATCATCACAGGAGAGTTGAA+AGG | + | chr3_3:17269669-17269688 | Msa0444350:three_prime_UTR | 40.0% | |
| TTGGGAAGAACAGAGGGATT+TGG | - | chr3_3:17265922-17265941 | None:intergenic | 45.0% | |
| ! | TGCGATTTGGGAAGAACAGA+GGG | - | chr3_3:17265928-17265947 | None:intergenic | 45.0% |
| GATGAACAGTGCTGCGATTT+GGG | - | chr3_3:17265940-17265959 | None:intergenic | 45.0% | |
| TCCTTCTTGCCTATGAAGCA+GGG | - | chr3_3:17266655-17266674 | None:intergenic | 45.0% | |
| CAACGAAGCCTAACCAAACA+GGG | - | chr3_3:17266801-17266820 | None:intergenic | 45.0% | |
| ACAACGAAGCCTAACCAAAC+AGG | - | chr3_3:17266802-17266821 | None:intergenic | 45.0% | |
| TGTCCACCGATGTAGTTAGT+TGG | + | chr3_3:17266848-17266867 | Msa0444350:intron | 45.0% | |
| ! | AGTTCCAGTTCGTGACTTGT+TGG | + | chr3_3:17267184-17267203 | Msa0444350:intron | 45.0% |
| TTGTTGGAGAGGCAATATGC+AGG | + | chr3_3:17267200-17267219 | Msa0444350:CDS | 45.0% | |
| CCAAATAACCGACCAGAGTT+TGG | - | chr3_3:17267763-17267782 | None:intergenic | 45.0% | |
| CCAAACTCTGGTCGGTTATT+TGG | + | chr3_3:17267760-17267779 | Msa0444350:intron | 45.0% | |
| GTCGGTTATTTGGAAATGGC+AGG | + | chr3_3:17267770-17267789 | Msa0444350:intron | 45.0% | |
| GGATATGAATCCCAACCCAA+AGG | - | chr3_3:17267881-17267900 | None:intergenic | 45.0% | |
| TACAACTTTGCTTGCCCTCA+GGG | + | chr3_3:17268293-17268312 | Msa0444350:intron | 45.0% | |
| TTAGCACTCTTAGTCCCTGA+GGG | - | chr3_3:17268310-17268329 | None:intergenic | 45.0% | |
| TTTAGCACTCTTAGTCCCTG+AGG | - | chr3_3:17268311-17268330 | None:intergenic | 45.0% | |
| CTAACCCGCAAGAAGAAAAC+AGG | - | chr3_3:17268471-17268490 | None:intergenic | 45.0% | |
| TTCTCATGTTGCTACTGGTG+AGG | + | chr3_3:17268545-17268564 | Msa0444350:intron | 45.0% | |
| ! | CTGCGATTTGGGAAGAACAG+AGG | - | chr3_3:17265929-17265948 | None:intergenic | 50.0% |
| GGATGAACAGTGCTGCGATT+TGG | - | chr3_3:17265941-17265960 | None:intergenic | 50.0% | |
| !! | TACATGTGTCGGTGTCGTGT+CGG | + | chr3_3:17266577-17266596 | Msa0444350:intron | 50.0% |
| ACACAACACGTGTTCGACAC+CGG | + | chr3_3:17266606-17266625 | Msa0444350:intron | 50.0% | |
| TATGAAGCAGGGACACTCCT+CGG | - | chr3_3:17266644-17266663 | None:intergenic | 50.0% | |
| TCCCTGCTTCATAGGCAAGA+AGG | + | chr3_3:17266651-17266670 | Msa0444350:intron | 50.0% | |
| CTCCTTCTTGCCTATGAAGC+AGG | - | chr3_3:17266656-17266675 | None:intergenic | 50.0% | |
| CTGCTTCATAGGCAAGAAGG+AGG | + | chr3_3:17266654-17266673 | Msa0444350:intron | 50.0% | |
| TCATAGGCAAGAAGGAGGTG+AGG | + | chr3_3:17266659-17266678 | Msa0444350:intron | 50.0% | |
| CTCTCCAACAAGTCACGAAC+TGG | - | chr3_3:17267191-17267210 | None:intergenic | 50.0% | |
| !! | CAGTTCGTGACTTGTTGGAG+AGG | + | chr3_3:17267189-17267208 | Msa0444350:CDS | 50.0% |
| GCAATATGCAGGCGAGTGAT+AGG | + | chr3_3:17267211-17267230 | Msa0444350:CDS | 50.0% | |
| AGCTTGCAGATGCTCGAGTT+GGG | - | chr3_3:17267250-17267269 | None:intergenic | 50.0% | |
| ! | TAGCTTGCAGATGCTCGAGT+TGG | - | chr3_3:17267251-17267270 | None:intergenic | 50.0% |
| TTTGCCACAAATAGGCGACG+AGG | + | chr3_3:17267724-17267743 | Msa0444350:intron | 50.0% | |
| !! | GAGTGTTGGTACCCAAACTC+TGG | + | chr3_3:17267748-17267767 | Msa0444350:intron | 50.0% |
| GTTGGTACCCAAACTCTGGT+CGG | + | chr3_3:17267752-17267771 | Msa0444350:intron | 50.0% | |
| TGACAGAGAATTGGGGCCTT+TGG | + | chr3_3:17267862-17267881 | Msa0444350:intron | 50.0% | |
| GACAGAGAATTGGGGCCTTT+GGG | + | chr3_3:17267863-17267882 | Msa0444350:intron | 50.0% | |
| ! | AGAATTGGGGCCTTTGGGTT+GGG | + | chr3_3:17267868-17267887 | Msa0444350:intron | 50.0% |
| TCAGTAGGGAAGGGAAAGAG+AGG | + | chr3_3:17267932-17267951 | Msa0444350:intron | 50.0% | |
| GTACAACTTTGCTTGCCCTC+AGG | + | chr3_3:17268292-17268311 | Msa0444350:intron | 50.0% | |
| GAGATTCTGATTAGGGGTGG+TGG | + | chr3_3:17268411-17268430 | Msa0444350:intron | 50.0% | |
| CAGAAAATGCTCCTGCCATG+TGG | + | chr3_3:17269605-17269624 | Msa0444350:intron | 50.0% | |
| CTTTCAGGAGCAAGACCACA+TGG | - | chr3_3:17269623-17269642 | None:intergenic | 50.0% | |
| ! | GCAGGGGACTTTGGTAGCTT+TGG | - | chr3_3:17266338-17266357 | None:intergenic | 55.0% |
| CACAACACGTGTTCGACACC+GGG | + | chr3_3:17266607-17266626 | Msa0444350:intron | 55.0% | |
| !! | GAGGAGTGTCCCTGCTTCAT+AGG | + | chr3_3:17266643-17266662 | Msa0444350:intron | 55.0% |
| CTGTGATGTGCTGCCATAGC+AGG | + | chr3_3:17267651-17267670 | Msa0444350:intron | 55.0% | |
| CTCTCCTCGTCGCCTATTTG+TGG | - | chr3_3:17267731-17267750 | None:intergenic | 55.0% | |
| ! | ATAGGCGACGAGGAGAGTGT+TGG | + | chr3_3:17267734-17267753 | Msa0444350:intron | 55.0% |
| GAGAATTGGGGCCTTTGGGT+TGG | + | chr3_3:17267867-17267886 | Msa0444350:intron | 55.0% | |
| AAGAAGGGAACAGAGGGGCA+TGG | + | chr3_3:17267974-17267993 | Msa0444350:intron | 55.0% | |
| GTCGCATGACGCACATGCTA+GGG | + | chr3_3:17268433-17268452 | Msa0444350:intron | 55.0% | |
| CAGGGTTTGGCAGGGGACTT+TGG | - | chr3_3:17266347-17266366 | None:intergenic | 60.0% | |
| !! | TGTCGGTGTCGTGTCGGTGT+CGG | + | chr3_3:17266583-17266602 | Msa0444350:intron | 60.0% |
| ACGTGTTCGACACCGGGACA+CGG | + | chr3_3:17266613-17266632 | Msa0444350:intron | 60.0% | |
| !! | TCCTCGGATTAGCCGTGTCC+CGG | - | chr3_3:17266628-17266647 | None:intergenic | 60.0% |
| GGTCGCATGACGCACATGCT+AGG | + | chr3_3:17268432-17268451 | Msa0444350:intron | 60.0% | |
| CAGGAGCAAGACCACATGGC+AGG | - | chr3_3:17269619-17269638 | None:intergenic | 60.0% | |
| ACCGGGACACGGCTAATCCG+AGG | + | chr3_3:17266624-17266643 | Msa0444350:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 17265811 | 17269973 | 17265811 | ID=Msa0444350;Name=Msa0444350 |
| chr3_3 | mRNA | 17265811 | 17269973 | 17265811 | ID=Msa0444350-mRNA-1;Parent=Msa0444350;Name=Msa0444350-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|1|0.66|1|1|1|3|318|149 |
| chr3_3 | exon | 17265811 | 17265966 | 17265811 | ID=Msa0444350-mRNA-1:exon:3599;Parent=Msa0444350-mRNA-1 |
| chr3_3 | exon | 17267186 | 17267431 | 17267186 | ID=Msa0444350-mRNA-1:exon:3600;Parent=Msa0444350-mRNA-1 |
| chr3_3 | exon | 17269608 | 17269973 | 17269608 | ID=Msa0444350-mRNA-1:exon:3601;Parent=Msa0444350-mRNA-1 |
| chr3_3 | CDS | 17265811 | 17265966 | 17265811 | ID=Msa0444350-mRNA-1:cds;Parent=Msa0444350-mRNA-1 |
| chr3_3 | CDS | 17267186 | 17267431 | 17267186 | ID=Msa0444350-mRNA-1:cds;Parent=Msa0444350-mRNA-1 |
| chr3_3 | CDS | 17269608 | 17269655 | 17269608 | ID=Msa0444350-mRNA-1:cds;Parent=Msa0444350-mRNA-1 |
| chr3_3 | three_prime_UTR | 17269656 | 17269973 | 17269656 | ID=Msa0444350-mRNA-1:three_prime_utr;Parent=Msa0444350-mRNA-1 |
| Gene Sequence |
| Protein sequence |
