AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1305710

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1305710 MtrunA17_Chr4g0037241 78.409 88 6 1 3 90 79 153 8.08e-41 131
Msa1305710 MtrunA17_Chr4g0037241 69.663 89 14 1 1 89 1 76 3.39e-34 114
Msa1305710 MtrunA17_Chr5g0444101 78.409 88 6 1 3 90 79 153 8.08e-41 131
Msa1305710 MtrunA17_Chr5g0444101 69.663 89 14 1 1 89 1 76 3.39e-34 114
Msa1305710 MtrunA17_Chr6g0475951 69.663 89 14 1 1 89 1 76 2.51e-35 115
Msa1305710 MtrunA17_Chr7g0266661 69.663 89 14 1 1 89 1 76 4.26e-35 116
Msa1305710 MtrunA17_Chr1g0178381 69.663 89 14 1 1 89 1 76 4.26e-35 116
Msa1305710 MtrunA17_Chr3g0127481 69.663 89 14 1 1 89 1 76 4.26e-35 116
Msa1305710 MtrunA17_Chr5g0413361 69.663 89 14 1 1 89 1 76 1.62e-34 115
Msa1305710 MtrunA17_Chr8g0380181 69.663 89 14 1 1 89 1 76 1.69e-34 115
Msa1305710 MtrunA17_Chr6g0475961 69.663 89 14 1 1 89 4 79 5.47e-34 115
Msa1305710 MtrunA17_Chr6g0475961 69.663 89 14 1 1 89 80 155 5.47e-34 115
Msa1305710 MtrunA17_Chr6g0475961 72.000 50 1 1 1 50 156 192 7.03e-14 63.5
Msa1305710 MtrunA17_Chr7g0274921 69.663 89 14 1 1 89 3 78 1.25e-33 115
Msa1305710 MtrunA17_Chr7g0274921 69.663 89 14 1 1 89 79 154 1.25e-33 115
Msa1305710 MtrunA17_Chr7g0274921 69.663 89 14 1 1 89 155 230 1.25e-33 115
Msa1305710 MtrunA17_Chr1g0181441 69.663 89 14 1 1 89 1 76 1.73e-33 115
Msa1305710 MtrunA17_Chr1g0181441 69.663 89 14 1 1 89 77 152 1.73e-33 115
Msa1305710 MtrunA17_Chr1g0181441 69.663 89 14 1 1 89 153 228 1.73e-33 115
Msa1305710 MtrunA17_Chr4g0041751 69.663 89 14 1 1 89 77 152 2.33e-33 114
Msa1305710 MtrunA17_Chr4g0041751 68.539 89 15 1 1 89 1 76 1.14e-32 113
Msa1305710 MtrunA17_Chr4g0041751 53.933 89 28 1 1 89 153 228 1.02e-20 82.0
Msa1305710 MtrunA17_Chr8g0377821 70.000 90 14 1 1 90 313 389 3.46e-33 117
Msa1305710 MtrunA17_Chr8g0377821 69.663 89 14 1 1 89 9 84 3.05e-32 115
Msa1305710 MtrunA17_Chr8g0377821 69.663 89 14 1 1 89 85 160 3.05e-32 115
Msa1305710 MtrunA17_Chr8g0377821 69.663 89 14 1 1 89 161 236 3.05e-32 115
Msa1305710 MtrunA17_Chr8g0377821 69.663 89 14 1 1 89 237 312 3.05e-32 115
Msa1305710 MtrunA17_Chr4g0046801 69.663 89 14 1 1 89 4 79 5.94e-32 115
Msa1305710 MtrunA17_Chr4g0046801 69.663 89 14 1 1 89 80 155 5.94e-32 115
Msa1305710 MtrunA17_Chr4g0046801 69.663 89 14 1 1 89 156 231 5.94e-32 115
Msa1305710 MtrunA17_Chr4g0046801 69.663 89 14 1 1 89 232 307 5.94e-32 115
Msa1305710 MtrunA17_Chr4g0046801 69.663 89 14 1 1 89 308 383 5.94e-32 115
Msa1305710 MtrunA17_Chr4g0046801 69.663 89 14 1 1 89 384 459 5.94e-32 115
Msa1305710 MtrunA17_Chr4g0041641 69.663 89 14 1 1 89 5 80 6.12e-32 115
Msa1305710 MtrunA17_Chr4g0041641 69.663 89 14 1 1 89 81 156 6.12e-32 115
Msa1305710 MtrunA17_Chr4g0041641 69.663 89 14 1 1 89 157 232 6.12e-32 115
Msa1305710 MtrunA17_Chr4g0041641 69.663 89 14 1 1 89 233 308 6.12e-32 115
Msa1305710 MtrunA17_Chr4g0041641 69.663 89 14 1 1 89 309 384 6.12e-32 115
Msa1305710 MtrunA17_Chr4g0041641 69.663 89 14 1 1 89 385 460 6.12e-32 115
Msa1305710 MtrunA17_Chr8g0342711 69.663 89 14 1 1 89 4 79 1.01e-31 115
Msa1305710 MtrunA17_Chr8g0342711 69.663 89 14 1 1 89 80 155 1.01e-31 115
Msa1305710 MtrunA17_Chr8g0342711 69.663 89 14 1 1 89 156 231 1.01e-31 115
Msa1305710 MtrunA17_Chr8g0342711 69.663 89 14 1 1 89 232 307 1.01e-31 115
Msa1305710 MtrunA17_Chr8g0342711 69.663 89 14 1 1 89 308 383 1.01e-31 115
Msa1305710 MtrunA17_Chr8g0342711 69.663 89 14 1 1 89 384 459 1.01e-31 115
Msa1305710 MtrunA17_Chr8g0342711 69.663 89 14 1 1 89 460 535 1.01e-31 115
Msa1305710 MtrunA17_Chr4g0048591 69.663 89 14 1 1 89 4 79 1.10e-31 115
Msa1305710 MtrunA17_Chr4g0048591 69.663 89 14 1 1 89 80 155 1.10e-31 115
Msa1305710 MtrunA17_Chr4g0048591 69.663 89 14 1 1 89 156 231 1.10e-31 115
Msa1305710 MtrunA17_Chr4g0048591 69.663 89 14 1 1 89 232 307 1.10e-31 115
Msa1305710 MtrunA17_Chr4g0048591 69.663 89 14 1 1 89 384 459 1.10e-31 115
Msa1305710 MtrunA17_Chr4g0048591 69.663 89 14 1 1 89 460 535 1.10e-31 115
Msa1305710 MtrunA17_Chr4g0048591 68.539 89 15 1 1 89 308 383 1.10e-30 112
Msa1305710 MtrunA17_Chr4g0041701 69.663 89 14 1 1 89 1 76 1.11e-31 115
Msa1305710 MtrunA17_Chr4g0041701 69.663 89 14 1 1 89 77 152 1.11e-31 115
Msa1305710 MtrunA17_Chr4g0041701 69.663 89 14 1 1 89 153 228 1.11e-31 115
Msa1305710 MtrunA17_Chr4g0041701 69.663 89 14 1 1 89 229 304 1.11e-31 115
Msa1305710 MtrunA17_Chr4g0041701 69.663 89 14 1 1 89 305 380 1.11e-31 115
Msa1305710 MtrunA17_Chr4g0041701 69.663 89 14 1 1 89 381 456 1.11e-31 115
Msa1305710 MtrunA17_Chr4g0041701 69.663 89 14 1 1 89 457 532 1.11e-31 115
Msa1305710 MtrunA17_Chr4g0046831 69.663 89 14 1 1 89 80 155 1.29e-31 115
Msa1305710 MtrunA17_Chr4g0046831 69.663 89 14 1 1 89 156 231 1.29e-31 115
Msa1305710 MtrunA17_Chr4g0046831 69.663 89 14 1 1 89 232 307 1.29e-31 115
Msa1305710 MtrunA17_Chr4g0046831 69.663 89 14 1 1 89 368 443 1.29e-31 115
Msa1305710 MtrunA17_Chr4g0046831 69.663 89 14 1 1 89 444 519 1.29e-31 115
Msa1305710 MtrunA17_Chr4g0046831 69.663 89 14 1 1 89 520 595 1.29e-31 115
Msa1305710 MtrunA17_Chr4g0046831 69.663 89 14 1 1 89 4 79 1.38e-31 115
Msa1305710 MtrunA17_Chr8g0374171 67.416 89 16 1 1 89 74 149 3.28e-24 89.7
Msa1305710 MtrunA17_Chr8g0374161 73.684 57 2 1 1 57 9 52 1.37e-19 74.7
Msa1305710 MtrunA17_Chr5g0433631 54.762 84 25 1 1 84 266 336 4.85e-19 79.3
Msa1305710 MtrunA17_Chr5g0433721 51.111 90 30 2 1 89 194 270 1.72e-18 77.0
Msa1305710 MtrunA17_Chr1g0169371 50.000 88 31 1 1 88 215 289 3.24e-18 76.6
Msa1305710 MtrunA17_Chr5g0428191 51.136 88 30 1 1 88 241 315 1.52e-17 75.1
Msa1305710 MtrunA17_Chr5g0424981 43.182 88 37 1 1 88 2 76 6.85e-16 65.9
Msa1305710 MtrunA17_Chr5g0433661 45.455 88 35 1 1 88 278 352 1.51e-14 67.0
Msa1305710 MtrunA17_Chr5g0433681 42.697 89 37 2 1 88 1 76 1.94e-14 62.4
Msa1305710 MtrunA17_Chr5g0433411 46.512 86 33 1 1 86 267 339 3.28e-14 65.9
Msa1305710 MtrunA17_Chr2g0298951 43.182 88 37 2 1 88 236 310 9.39e-14 64.7
Msa1305710 MtrunA17_Chr2g0298941 42.045 88 38 1 1 88 177 251 1.56e-13 63.5
Msa1305710 MtrunA17_Chr1g0169401 43.373 83 34 1 7 89 2 71 5.63e-13 58.5
Msa1305710 MtrunA17_Chr5g0424971 42.045 88 38 1 1 88 252 326 5.69e-13 62.4
Msa1305710 MtrunA17_Chr5g0433521 38.636 88 41 1 1 88 240 314 8.63e-13 62.0
Msa1305710 MtrunA17_Chr7g0259431 40.909 88 39 1 1 88 223 297 1.29e-12 61.2
Msa1305710 MtrunA17_Chr4g0003111 37.500 88 42 1 1 88 4 78 5.41e-12 56.2
Msa1305710 MtrunA17_Chr7g0223111 46.591 88 35 2 1 88 267 342 9.71e-12 58.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1305710 AT1G31340.1 77.011 87 7 1 3 89 79 152 5.77e-39 127
Msa1305710 AT1G31340.1 68.889 90 15 1 1 90 1 77 6.90e-34 114
Msa1305710 AT2G35635.1 75.862 87 8 1 3 89 79 152 6.71e-38 124
Msa1305710 AT2G35635.1 68.889 90 15 1 1 90 1 77 5.25e-34 114
Msa1305710 AT2G36170.1 69.663 89 14 1 1 89 1 76 4.62e-35 116
Msa1305710 AT3G52590.1 69.663 89 14 1 1 89 1 76 4.62e-35 116
Msa1305710 AT1G23410.1 69.663 89 14 1 1 89 1 76 2.64e-34 115
Msa1305710 AT4G05320.7 69.663 89 14 1 1 89 1 76 2.92e-34 115
Msa1305710 AT4G05320.7 69.663 89 14 1 1 89 77 152 2.92e-34 115
Msa1305710 AT4G05050.4 69.663 89 14 1 1 89 1 76 2.92e-34 115
Msa1305710 AT4G05050.4 69.663 89 14 1 1 89 77 152 2.92e-34 115
Msa1305710 AT2G47110.2 69.663 89 14 1 1 89 1 76 3.69e-34 115
Msa1305710 AT2G47110.1 69.663 89 14 1 1 89 1 76 3.69e-34 115
Msa1305710 AT3G62250.1 69.663 89 14 1 1 89 1 76 3.73e-34 115
Msa1305710 AT4G02890.2 69.663 89 14 1 1 89 1 76 1.95e-33 115
Msa1305710 AT4G02890.2 69.663 89 14 1 1 89 77 152 1.95e-33 115
Msa1305710 AT4G02890.2 69.663 89 14 1 1 89 153 228 1.95e-33 115
Msa1305710 AT4G02890.1 69.663 89 14 1 1 89 1 76 1.95e-33 115
Msa1305710 AT4G02890.1 69.663 89 14 1 1 89 77 152 1.95e-33 115
Msa1305710 AT4G02890.1 69.663 89 14 1 1 89 153 228 1.95e-33 115
Msa1305710 AT4G05050.2 69.663 89 14 1 1 89 1 76 1.95e-33 115
Msa1305710 AT4G05050.2 69.663 89 14 1 1 89 77 152 1.95e-33 115
Msa1305710 AT4G05050.2 69.663 89 14 1 1 89 153 228 1.95e-33 115
Msa1305710 AT4G05050.1 69.663 89 14 1 1 89 1 76 1.95e-33 115
Msa1305710 AT4G05050.1 69.663 89 14 1 1 89 77 152 1.95e-33 115
Msa1305710 AT4G05050.1 69.663 89 14 1 1 89 153 228 1.95e-33 115
Msa1305710 AT4G05050.3 69.663 89 14 1 1 89 1 76 1.95e-33 115
Msa1305710 AT4G05050.3 69.663 89 14 1 1 89 77 152 1.95e-33 115
Msa1305710 AT4G05050.3 69.663 89 14 1 1 89 153 228 1.95e-33 115
Msa1305710 AT1G11980.1 65.169 89 18 1 1 89 1 76 2.71e-33 110
Msa1305710 AT1G55060.1 68.539 89 15 1 1 89 77 152 5.00e-33 114
Msa1305710 AT1G55060.1 66.667 90 17 1 1 90 153 229 2.80e-31 109
Msa1305710 AT1G55060.1 60.674 89 22 1 1 89 1 76 2.98e-28 102
Msa1305710 AT5G03240.3 68.889 90 15 1 1 90 229 305 6.82e-33 115
Msa1305710 AT5G03240.3 69.663 89 14 1 1 89 1 76 9.59e-33 115
Msa1305710 AT5G03240.3 69.663 89 14 1 1 89 77 152 9.59e-33 115
Msa1305710 AT5G03240.3 69.663 89 14 1 1 89 153 228 9.59e-33 115
Msa1305710 AT5G03240.2 68.889 90 15 1 1 90 229 305 6.82e-33 115
Msa1305710 AT5G03240.2 69.663 89 14 1 1 89 1 76 9.59e-33 115
Msa1305710 AT5G03240.2 69.663 89 14 1 1 89 77 152 9.59e-33 115
Msa1305710 AT5G03240.2 69.663 89 14 1 1 89 153 228 9.59e-33 115
Msa1305710 AT5G03240.1 68.889 90 15 1 1 90 229 305 6.82e-33 115
Msa1305710 AT5G03240.1 69.663 89 14 1 1 89 1 76 9.59e-33 115
Msa1305710 AT5G03240.1 69.663 89 14 1 1 89 77 152 9.59e-33 115
Msa1305710 AT5G03240.1 69.663 89 14 1 1 89 153 228 9.59e-33 115
Msa1305710 AT5G20620.2 68.889 90 15 1 1 90 229 305 6.82e-33 115
Msa1305710 AT5G20620.2 69.663 89 14 1 1 89 1 76 9.59e-33 115
Msa1305710 AT5G20620.2 69.663 89 14 1 1 89 77 152 9.59e-33 115
Msa1305710 AT5G20620.2 69.663 89 14 1 1 89 153 228 9.59e-33 115
Msa1305710 AT4G05320.5 69.663 89 14 1 1 89 1 76 9.31e-33 115
Msa1305710 AT4G05320.5 69.663 89 14 1 1 89 77 152 9.31e-33 115
Msa1305710 AT4G05320.5 69.663 89 14 1 1 89 153 228 9.31e-33 115
Msa1305710 AT4G05320.5 69.663 89 14 1 1 89 229 304 9.31e-33 115
Msa1305710 AT4G05320.8 69.663 89 14 1 1 89 1 76 9.31e-33 115
Msa1305710 AT4G05320.8 69.663 89 14 1 1 89 77 152 9.31e-33 115
Msa1305710 AT4G05320.8 69.663 89 14 1 1 89 153 228 9.31e-33 115
Msa1305710 AT4G05320.8 69.663 89 14 1 1 89 229 304 9.31e-33 115
Msa1305710 AT4G02890.3 69.663 89 14 1 1 89 1 76 9.31e-33 115
Msa1305710 AT4G02890.3 69.663 89 14 1 1 89 77 152 9.31e-33 115
Msa1305710 AT4G02890.3 69.663 89 14 1 1 89 153 228 9.31e-33 115
Msa1305710 AT4G02890.3 69.663 89 14 1 1 89 229 304 9.31e-33 115
Msa1305710 AT4G02890.4 69.663 89 14 1 1 89 1 76 9.31e-33 115
Msa1305710 AT4G02890.4 69.663 89 14 1 1 89 77 152 9.31e-33 115
Msa1305710 AT4G02890.4 69.663 89 14 1 1 89 153 228 9.31e-33 115
Msa1305710 AT4G02890.4 69.663 89 14 1 1 89 229 304 9.31e-33 115
Msa1305710 AT1G65350.1 69.663 89 14 1 1 89 1 76 1.19e-32 115
Msa1305710 AT1G65350.1 68.539 89 15 1 1 89 152 227 1.35e-31 112
Msa1305710 AT1G65350.1 68.539 89 14 2 1 89 77 151 1.19e-29 107
Msa1305710 AT1G65350.1 56.731 104 18 2 1 90 228 318 6.67e-26 97.8
Msa1305710 AT5G37640.1 68.539 89 15 1 1 89 79 154 2.00e-32 114
Msa1305710 AT5G37640.1 64.045 89 19 1 1 89 155 230 1.88e-28 104
Msa1305710 AT5G37640.1 64.444 90 18 2 1 89 231 307 1.76e-26 99.4
Msa1305710 AT5G37640.1 55.056 89 27 1 1 89 3 78 1.07e-21 86.7
Msa1305710 AT5G20620.1 68.889 90 15 1 1 90 305 381 2.38e-32 115
Msa1305710 AT5G20620.1 69.663 89 14 1 1 89 1 76 3.33e-32 115
Msa1305710 AT5G20620.1 69.663 89 14 1 1 89 77 152 3.33e-32 115
Msa1305710 AT5G20620.1 69.663 89 14 1 1 89 153 228 3.33e-32 115
Msa1305710 AT5G20620.1 69.663 89 14 1 1 89 229 304 3.33e-32 115
Msa1305710 AT4G05320.1 69.663 89 14 1 1 89 1 76 3.35e-32 115
Msa1305710 AT4G05320.1 69.663 89 14 1 1 89 77 152 3.35e-32 115
Msa1305710 AT4G05320.1 69.663 89 14 1 1 89 153 228 3.35e-32 115
Msa1305710 AT4G05320.1 69.663 89 14 1 1 89 229 304 3.35e-32 115
Msa1305710 AT4G05320.1 69.663 89 14 1 1 89 305 380 3.35e-32 115
Msa1305710 AT4G05320.6 69.663 89 14 1 1 89 1 76 3.35e-32 115
Msa1305710 AT4G05320.6 69.663 89 14 1 1 89 77 152 3.35e-32 115
Msa1305710 AT4G05320.6 69.663 89 14 1 1 89 153 228 3.35e-32 115
Msa1305710 AT4G05320.6 69.663 89 14 1 1 89 229 304 3.35e-32 115
Msa1305710 AT4G05320.6 69.663 89 14 1 1 89 305 380 3.35e-32 115
Msa1305710 AT4G05320.3 69.663 89 14 1 1 89 1 76 3.35e-32 115
Msa1305710 AT4G05320.3 69.663 89 14 1 1 89 77 152 3.35e-32 115
Msa1305710 AT4G05320.3 69.663 89 14 1 1 89 153 228 3.35e-32 115
Msa1305710 AT4G05320.3 69.663 89 14 1 1 89 229 304 3.35e-32 115
Msa1305710 AT4G05320.3 69.663 89 14 1 1 89 305 380 3.35e-32 115
Msa1305710 AT4G05320.2 69.663 89 14 1 1 89 1 76 8.21e-32 115
Msa1305710 AT4G05320.2 69.663 89 14 1 1 89 77 152 8.21e-32 115
Msa1305710 AT4G05320.2 69.663 89 14 1 1 89 153 228 8.21e-32 115
Msa1305710 AT4G05320.2 69.663 89 14 1 1 89 229 304 8.21e-32 115
Msa1305710 AT4G05320.2 69.663 89 14 1 1 89 305 380 8.21e-32 115
Msa1305710 AT4G05320.2 69.663 89 14 1 1 89 381 456 8.21e-32 115
Msa1305710 AT4G05320.4 69.663 89 14 1 1 89 1 76 8.21e-32 115
Msa1305710 AT4G05320.4 69.663 89 14 1 1 89 77 152 8.21e-32 115
Msa1305710 AT4G05320.4 69.663 89 14 1 1 89 153 228 8.21e-32 115
Msa1305710 AT4G05320.4 69.663 89 14 1 1 89 229 304 8.21e-32 115
Msa1305710 AT4G05320.4 69.663 89 14 1 1 89 305 380 8.21e-32 115
Msa1305710 AT4G05320.4 69.663 89 14 1 1 89 381 456 8.21e-32 115
Msa1305710 AT3G09790.2 65.169 89 18 1 1 89 79 154 7.05e-28 105
Msa1305710 AT3G09790.2 59.551 89 23 1 1 89 3 78 7.83e-24 94.0
Msa1305710 AT3G09790.2 57.471 87 24 1 1 87 552 625 2.04e-20 84.3
Msa1305710 AT3G09790.2 50.000 96 28 2 1 89 469 551 6.33e-19 80.1
Msa1305710 AT3G09790.2 50.562 89 31 1 1 89 393 468 4.35e-18 77.8
Msa1305710 AT3G09790.2 51.685 89 28 2 1 87 319 394 2.09e-17 75.9
Msa1305710 AT3G09790.2 48.936 94 30 2 1 89 238 318 9.26e-17 73.9
Msa1305710 AT3G09790.2 47.368 95 30 3 1 88 155 236 1.39e-16 73.2
Msa1305710 AT3G09790.1 65.169 89 18 1 1 89 79 154 7.05e-28 105
Msa1305710 AT3G09790.1 59.551 89 23 1 1 89 3 78 7.83e-24 94.0
Msa1305710 AT3G09790.1 57.471 87 24 1 1 87 552 625 2.04e-20 84.3
Msa1305710 AT3G09790.1 50.000 96 28 2 1 89 469 551 6.33e-19 80.1
Msa1305710 AT3G09790.1 50.562 89 31 1 1 89 393 468 4.35e-18 77.8
Msa1305710 AT3G09790.1 51.685 89 28 2 1 87 319 394 2.09e-17 75.9
Msa1305710 AT3G09790.1 48.936 94 30 2 1 89 238 318 9.26e-17 73.9
Msa1305710 AT3G09790.1 47.368 95 30 3 1 88 155 236 1.39e-16 73.2
Msa1305710 AT1G53930.1 52.326 86 28 1 1 86 86 158 5.21e-22 84.3
Msa1305710 AT1G53950.1 48.864 88 32 1 1 88 69 143 3.24e-18 73.9

Find 44 sgRNAs with CRISPR-Local

Find 234 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTTCTCGTCGTTCTTTCT+TGG 0.186573 8_3:+69267884 None:intergenic
CGATGCGGAGTATGGGTAAT+TGG 0.206513 8_3:+69267970 None:intergenic
CTCGAGAGTGATAGTCTTTC+CGG 0.212687 8_3:+69267817 None:intergenic
CTTGGTCACTTTCTAGTTCT+TGG 0.254399 8_3:-69264440 Msa1305710:three_prime_UTR
AGTTTGAGCGATGCGGAGTA+TGG 0.275126 8_3:+69267962 None:intergenic
GAGCTTCCTTTCATGTCTTT+AGG 0.290193 8_3:+69264392 None:intergenic
TCACTTGGTGCTTGCATTGA+GGG 0.346912 8_3:-69264519 Msa1305710:CDS
TATAAATTTAGGGTAACTAT+TGG 0.391909 8_3:-69264319 Msa1305710:three_prime_UTR
AGAGAGAACCTCTGCTGCAC+AGG 0.431937 8_3:+69266616 None:intergenic
TTCACTTGGTGCTTGCATTG+AGG 0.449045 8_3:-69264520 Msa1305710:CDS
TTGAGGGGTGGTAATTAGTA+AGG 0.455140 8_3:-69264503 Msa1305710:exon
GGGTGGTTCTGTGCTTCACT+TGG 0.473264 8_3:-69264534 Msa1305710:CDS
AAATTTAGGGTAACTATTGG+TGG 0.478735 8_3:-69264316 Msa1305710:three_prime_UTR
ATCTTCGTCAAAACTTTGAC+CGG 0.482710 8_3:-69267836 Msa1305710:CDS
ATACGATCAATTGTATCAGT+TGG 0.484906 8_3:+69266673 None:intergenic
CACTTGGTGCTTGCATTGAG+GGG 0.485261 8_3:-69264518 Msa1305710:CDS
AACAATTATGTCCTCAGAGA+TGG 0.486416 8_3:+69264360 None:intergenic
GATGCGGAGTATGGGTAATT+GGG 0.487568 8_3:+69267971 None:intergenic
ACCCTAACTAACCTGGATCT+TGG 0.496140 8_3:+69267760 None:intergenic
CAACGTCAAGGCCAAGATCC+AGG 0.500226 8_3:-69267771 Msa1305710:intron
TGAAGCAACTACCCTGTGGC+GGG 0.503500 8_3:+69267998 None:intergenic
GACATTAGCTTGTTTAGACT+TGG 0.510967 8_3:-69264458 Msa1305710:three_prime_UTR
TGCTGCAGGCTCATATATGC+TGG 0.530859 8_3:-69264602 Msa1305710:intron
GAGAACCTCTGCTGCACAGG+TGG 0.536260 8_3:+69266619 None:intergenic
TAGAAACGGAATCCCGCCAC+AGG 0.536418 8_3:-69268010 Msa1305710:five_prime_UTR
TGATACAATTGATCGTATCA+AGG 0.544622 8_3:-69266668 Msa1305710:CDS
CTTGGCCTTGACGTTGTCGA+TGG 0.546175 8_3:+69267778 None:intergenic
ACAAGCTAATGTCTTGAGAT+CGG 0.547092 8_3:+69264468 None:intergenic
GGGGAACTGTTAGATAGAAA+CGG 0.554012 8_3:-69268024 Msa1305710:five_prime_UTR
GTTTGAGCGATGCGGAGTAT+GGG 0.557728 8_3:+69267963 None:intergenic
GCTAAAGAGTACAACATTGA+GGG 0.566179 8_3:-69264554 Msa1305710:CDS
GAATTCCACCTGTGCAGCAG+AGG 0.571422 8_3:-69266624 Msa1305710:intron
AGCTAAAGAGTACAACATTG+AGG 0.583787 8_3:-69264555 Msa1305710:CDS
GTTATTTAGTTTGAGCGATG+CGG 0.602160 8_3:+69267955 None:intergenic
TTGGTGCTTGCATTGAGGGG+TGG 0.618700 8_3:-69264515 Msa1305710:CDS
TCTGAACCTAAAGACATGAA+AGG 0.620725 8_3:-69264398 Msa1305710:three_prime_UTR
TTGAAGCAACTACCCTGTGG+CGG 0.632496 8_3:+69267997 None:intergenic
ATTCATAAACAGAAGTACAA+TGG 0.633072 8_3:-69264232 Msa1305710:three_prime_UTR
CGACACCATCGACAACGTCA+AGG 0.661901 8_3:-69267783 Msa1305710:CDS
CGGAAAGACTATCACTCTCG+AGG 0.665568 8_3:-69267816 Msa1305710:CDS
AGAAACGGAATCCCGCCACA+GGG 0.670011 8_3:-69268009 Msa1305710:five_prime_UTR
TCTATACTCGTCCATCTCTG+AGG 0.673542 8_3:-69264371 Msa1305710:three_prime_UTR
AAAGAGTACAACATTGAGGG+TGG 0.697133 8_3:-69264551 Msa1305710:CDS
TATTTGAAGCAACTACCCTG+TGG 0.724318 8_3:+69267994 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGATATAAATATAAATTGTA+TGG - chr8_3:69265913-69265932 Msa1305710:intron 10.0%
!! TTCTCATAATAAAAAAATTA+TGG + chr8_3:69266769-69266788 None:intergenic 10.0%
!! GATAAAACACTTAAAATAAA+TGG + chr8_3:69264536-69264555 None:intergenic 15.0%
!! AATTTAAGAGTTATAACATT+TGG + chr8_3:69265679-69265698 None:intergenic 15.0%
!!! ACTTTTGAATTGAAAATTAT+TGG - chr8_3:69266096-69266115 Msa1305710:intron 15.0%
!! GTTAAGAGATTTATTTATTT+AGG - chr8_3:69267144-69267163 Msa1305710:intron 15.0%
!! TAAGCATATAAAAGAATGTT+TGG - chr8_3:69266027-69266046 Msa1305710:intron 20.0%
!!! TGCATGAATATTTAACTTAT+AGG + chr8_3:69266057-69266076 None:intergenic 20.0%
!!! TTATTTCTCTAATGATTTGT+AGG + chr8_3:69266370-69266389 None:intergenic 20.0%
!! TACAAATCATTAGAGAAATA+AGG - chr8_3:69266369-69266388 Msa1305710:intron 20.0%
!!! TGTTTTTTAAAGTTTAGAAC+AGG + chr8_3:69266558-69266577 None:intergenic 20.0%
!!! TGCTTGGTTTTATAAATTTA+GGG - chr8_3:69267899-69267918 Msa1305710:five_prime_UTR 20.0%
!!! TATAAATTTAGGGTAACTAT+TGG - chr8_3:69267909-69267928 Msa1305710:five_prime_UTR 20.0%
!!! TTATGAAGAGAACTAGTTTT+GGG + chr8_3:69264662-69264681 None:intergenic 25.0%
!!! ATTATGAAGAGAACTAGTTT+TGG + chr8_3:69264663-69264682 None:intergenic 25.0%
! TTAAAAAATAGCACATAGAC+AGG + chr8_3:69265145-69265164 None:intergenic 25.0%
! AGCTTAGTTTCAGTTTATTT+GGG + chr8_3:69265219-69265238 None:intergenic 25.0%
! TAGCTTAGTTTCAGTTTATT+TGG + chr8_3:69265220-69265239 None:intergenic 25.0%
! ACGTCATATAAAACAGATAA+AGG + chr8_3:69265248-69265267 None:intergenic 25.0%
! TAAAGTCTTCACTTTAATCA+TGG + chr8_3:69265505-69265524 None:intergenic 25.0%
! ATTAAAGTGAAGACTTTAAC+TGG - chr8_3:69265507-69265526 Msa1305710:intron 25.0%
!! ATTATCTGCCAGTATTATTT+TGG - chr8_3:69265745-69265764 Msa1305710:intron 25.0%
! TTTATCTGCCAAAATAATAC+TGG + chr8_3:69265756-69265775 None:intergenic 25.0%
!!! TTTTAAAGCTTACTCATGTA+AGG - chr8_3:69265829-69265848 Msa1305710:intron 25.0%
! CCAAAAATCATATTAAACAG+AGG + chr8_3:69265985-69266004 None:intergenic 25.0%
!! CCTCTGTTTAATATGATTTT+TGG - chr8_3:69265982-69266001 Msa1305710:intron 25.0%
! CATATAAAAGAATGTTTGGA+GGG - chr8_3:69266031-69266050 Msa1305710:intron 25.0%
!! GTATTTCTTGTTTACATAGT+TGG + chr8_3:69266341-69266360 None:intergenic 25.0%
! GTGTAATATGAGTAAATCTA+TGG + chr8_3:69266639-69266658 None:intergenic 25.0%
!! CCTTTTAGTATGATTCTTTT+CGG - chr8_3:69266702-69266721 Msa1305710:intron 25.0%
!! CTTTTAGTATGATTCTTTTC+GGG - chr8_3:69266703-69266722 Msa1305710:intron 25.0%
! TCAAAAAATTTCAGTTCAGA+AGG - chr8_3:69266736-69266755 Msa1305710:intron 25.0%
! TTCAGTTAATTGTTTGAGAA+GGG + chr8_3:69266900-69266919 None:intergenic 25.0%
! TTTCAGTTAATTGTTTGAGA+AGG + chr8_3:69266901-69266920 None:intergenic 25.0%
! ATCTAGTATTTCACAAACAT+CGG - chr8_3:69267022-69267041 Msa1305710:intron 25.0%
!! TTGTATCTTTTGAATATCCA+GGG - chr8_3:69267274-69267293 Msa1305710:intron 25.0%
!! TAATTGTTCTTTTATGTGCT+TGG - chr8_3:69267883-69267902 Msa1305710:five_prime_UTR 25.0%
!!! GTGCTTGGTTTTATAAATTT+AGG - chr8_3:69267898-69267917 Msa1305710:five_prime_UTR 25.0%
!!! TGATTAAGATACCACTTTTT+GGG + chr8_3:69267961-69267980 None:intergenic 25.0%
!!! TTGATTAAGATACCACTTTT+TGG + chr8_3:69267962-69267981 None:intergenic 25.0%
!! ATTCATAAACAGAAGTACAA+TGG - chr8_3:69267996-69268015 Msa1305710:five_prime_UTR 25.0%
ACTGTTAACTTATGTGTGTT+AGG - chr8_3:69264615-69264634 Msa1305710:intron 30.0%
! CATGATATTTAAGAAAGTGC+TGG + chr8_3:69264822-69264841 None:intergenic 30.0%
GAATTGAATATCAGATCGTA+TGG - chr8_3:69264841-69264860 Msa1305710:intron 30.0%
ATCGCATGTAAACATGAAAT+CGG - chr8_3:69264974-69264993 Msa1305710:intron 30.0%
TCTATAAGATTTAGTGATCC+TGG - chr8_3:69265013-69265032 Msa1305710:intron 30.0%
ATAAACTGAAACTAAGCTAC+AGG - chr8_3:69265221-69265240 Msa1305710:intron 30.0%
TAAACTGAAACTAAGCTACA+GGG - chr8_3:69265222-69265241 Msa1305710:intron 30.0%
! TGCTGATTACAACATACAAA+AGG - chr8_3:69265440-69265459 Msa1305710:intron 30.0%
ATACGATCAATTGTATCAGT+TGG + chr8_3:69265558-69265577 None:intergenic 30.0%
TGATACAATTGATCGTATCA+AGG - chr8_3:69265560-69265579 Msa1305710:intron 30.0%
TCCATGCATTTATATGTCAT+TGG - chr8_3:69265787-69265806 Msa1305710:intron 30.0%
ACCAATGACATATAAATGCA+TGG + chr8_3:69265791-69265810 None:intergenic 30.0%
GCATATAAAAGAATGTTTGG+AGG - chr8_3:69266030-69266049 Msa1305710:intron 30.0%
TTCAAAAGTCAAACAGTGTA+TGG + chr8_3:69266085-69266104 None:intergenic 30.0%
AACTTGAACTCAAATTTCCT+CGG - chr8_3:69266190-69266209 Msa1305710:intron 30.0%
GCACATAGATAGTATTAATG+CGG - chr8_3:69266305-69266324 Msa1305710:intron 30.0%
TCATCAGTTTCAATTCTTTC+TGG - chr8_3:69266485-69266504 Msa1305710:intron 30.0%
!!! TAGAACAGGTTTTGAAAAAC+CGG + chr8_3:69266544-69266563 None:intergenic 30.0%
!!! TACACGACTGGTTTTTTAAA+AGG + chr8_3:69266671-69266690 None:intergenic 30.0%
CCGAAAAGAATCATACTAAA+AGG + chr8_3:69266705-69266724 None:intergenic 30.0%
!! TAGCGGATACTAATATTTTG+AGG + chr8_3:69266935-69266954 None:intergenic 30.0%
GTTTGTGAAATACTAGATAC+TGG + chr8_3:69267020-69267039 None:intergenic 30.0%
!! ATTTGGTGCTAATTAGAACT+GGG - chr8_3:69267238-69267257 Msa1305710:intron 30.0%
! CTTGTATCTTTTGAATATCC+AGG - chr8_3:69267273-69267292 Msa1305710:intron 30.0%
! AAATTTAGGGTAACTATTGG+TGG - chr8_3:69267912-69267931 Msa1305710:five_prime_UTR 30.0%
! ATGCTTTTAAACCCAAAAAG+TGG - chr8_3:69267947-69267966 Msa1305710:five_prime_UTR 30.0%
!! GTTATTTAGTTTGAGCGATG+CGG + chr8_3:69264276-69264295 None:intergenic 35.0%
ATCTTCGTCAAAACTTTGAC+CGG - chr8_3:69264392-69264411 Msa1305710:three_prime_UTR 35.0%
!!! ATTGTGTGCCTTTTAGAGTT+GGG - chr8_3:69264704-69264723 Msa1305710:intron 35.0%
GATCTCTTAGTAATAACGAG+AGG - chr8_3:69264739-69264758 Msa1305710:intron 35.0%
GAGCCGCATATTGAAATAAA+CGG + chr8_3:69264780-69264799 None:intergenic 35.0%
!! TGGGTTTTCACGATTTTGAT+CGG + chr8_3:69264897-69264916 None:intergenic 35.0%
GAGTGAAATCACAAAATCGT+GGG + chr8_3:69264916-69264935 None:intergenic 35.0%
TGAGTGAAATCACAAAATCG+TGG + chr8_3:69264917-69264936 None:intergenic 35.0%
! TGTTTACATGCGATTTTGCA+CGG + chr8_3:69264968-69264987 None:intergenic 35.0%
AACATAAACAACTCAAAGCC+AGG + chr8_3:69265034-69265053 None:intergenic 35.0%
ATGTTGTTGTAGGACAAAGA+AGG - chr8_3:69265354-69265373 Msa1305710:intron 35.0%
AAAGGAATCAACTCTTCACT+TGG - chr8_3:69265458-69265477 Msa1305710:intron 35.0%
GAACGTGTTGAAGAAAAAGA+AGG - chr8_3:69265582-69265601 Msa1305710:intron 35.0%
!!! TCTCTCTCTCTCATGTTTTT+TGG - chr8_3:69265636-69265655 Msa1305710:intron 35.0%
!!! CTCTCTCTCTCATGTTTTTT+GGG - chr8_3:69265637-69265656 Msa1305710:intron 35.0%
!! GAGTAAGCTTTAAAAGTGAG+CGG + chr8_3:69265824-69265843 None:intergenic 35.0%
!! GATTTTTGGATGCTTCATCT+AGG - chr8_3:69265996-69266015 Msa1305710:intron 35.0%
AAAATCCCTCTTCTCATCAT+AGG + chr8_3:69266404-69266423 None:intergenic 35.0%
! ATGATGAGAAGAGGGATTTT+AGG - chr8_3:69266152-69266171 Msa1305710:intron 35.0%
! TGATGAGAAGAGGGATTTTA+GGG - chr8_3:69266153-69266172 Msa1305710:intron 35.0%
AGATAGTATTAATGCGGATC+TGG - chr8_3:69266311-69266330 Msa1305710:intron 35.0%
GTTTCAGCTTCATTTCTGTT+TGG - chr8_3:69266507-69266526 Msa1305710:intron 35.0%
ATGGTTGTACTGCAATTCTA+GGG + chr8_3:69266620-69266639 None:intergenic 35.0%
TATGGTTGTACTGCAATTCT+AGG + chr8_3:69266621-69266640 None:intergenic 35.0%
GTTTGAAAACTATACACGAC+TGG + chr8_3:69266683-69266702 None:intergenic 35.0%
! TCATTTTCTCCATCAACTGT+GGG - chr8_3:69266801-69266820 Msa1305710:intron 35.0%
CAAACTAGAGGATGCTTATT+GGG + chr8_3:69266858-69266877 None:intergenic 35.0%
TCAAACTAGAGGATGCTTAT+TGG + chr8_3:69266859-69266878 None:intergenic 35.0%
!! TTAGTATCCGCTATTTCTAG+TGG - chr8_3:69266942-69266961 Msa1305710:intron 35.0%
CGAAAGTTATTGTACTCTTC+CGG - chr8_3:69266974-69266993 Msa1305710:intron 35.0%
ATAATGTGTGAAGTCTGTAC+CGG + chr8_3:69266996-69267015 None:intergenic 35.0%
GTATTTCACAAACATCGGTA+TGG - chr8_3:69267027-69267046 Msa1305710:intron 35.0%
! AGGACAGGGTTAATGTTTTT+GGG - chr8_3:69267100-69267119 Msa1305710:intron 35.0%
TGTATTGCCTATGAATGAAG+AGG - chr8_3:69267199-69267218 Msa1305710:intron 35.0%
GTATTGCCTATGAATGAAGA+GGG - chr8_3:69267200-69267219 Msa1305710:intron 35.0%
!! CATTTGGTGCTAATTAGAAC+TGG - chr8_3:69267237-69267256 Msa1305710:intron 35.0%
CATAAAGTTATGTAGATCCC+TGG + chr8_3:69267294-69267313 None:intergenic 35.0%
! TGCACTGATATGATAGAAAG+CGG + chr8_3:69267340-69267359 None:intergenic 35.0%
TTATACAAGCTTCATCGAGT+TGG - chr8_3:69267387-69267406 Msa1305710:intron 35.0%
GAGTTGGATTGCATATTTAC+TGG - chr8_3:69267403-69267422 Msa1305710:intron 35.0%
TTGATTCTGACGCTTTAATC+TGG - chr8_3:69267475-69267494 Msa1305710:intron 35.0%
!!! ATGTTTTAGCTTTCTTCGCT+AGG - chr8_3:69267530-69267549 Msa1305710:intron 35.0%
! AGCTAAAGAGTACAACATTG+AGG - chr8_3:69267673-69267692 Msa1305710:intron 35.0%
! GCTAAAGAGTACAACATTGA+GGG - chr8_3:69267674-69267693 Msa1305710:intron 35.0%
ACAAGCTAATGTCTTGAGAT+CGG + chr8_3:69267763-69267782 None:intergenic 35.0%
!! GACATTAGCTTGTTTAGACT+TGG - chr8_3:69267770-69267789 Msa1305710:intron 35.0%
TCTGAACCTAAAGACATGAA+AGG - chr8_3:69267830-69267849 Msa1305710:CDS 35.0%
AACAATTATGTCCTCAGAGA+TGG + chr8_3:69267871-69267890 None:intergenic 35.0%
! TATTTGAAGCAACTACCCTG+TGG + chr8_3:69264237-69264256 None:intergenic 40.0%
TTCTTCTCGTCGTTCTTTCT+TGG + chr8_3:69264347-69264366 None:intergenic 40.0%
ATGAGAAACCCTAACTAACC+TGG + chr8_3:69264478-69264497 None:intergenic 40.0%
ATCAAAATTTCGCGTCTGCT+AGG - chr8_3:69264553-69264572 Msa1305710:CDS 40.0%
TCAAAATTTCGCGTCTGCTA+GGG - chr8_3:69264554-69264573 Msa1305710:CDS 40.0%
GTGTTAGGTATCACAGAACT+AGG - chr8_3:69264630-69264649 Msa1305710:intron 40.0%
!!! GATTGTGTGCCTTTTAGAGT+TGG - chr8_3:69264703-69264722 Msa1305710:intron 40.0%
!!! TGCCTTTTAGAGTTGGGAAT+GGG - chr8_3:69264710-69264729 Msa1305710:intron 40.0%
TTCCCATTCCCAACTCTAAA+AGG + chr8_3:69264715-69264734 None:intergenic 40.0%
! AACGAGAGGTTATTGCTGTT+TGG - chr8_3:69264753-69264772 Msa1305710:intron 40.0%
!! ACGAGAGGTTATTGCTGTTT+GGG - chr8_3:69264754-69264773 Msa1305710:intron 40.0%
GGGCCGTTTATTTCAATATG+CGG - chr8_3:69264774-69264793 Msa1305710:intron 40.0%
!! GGGTTTTCACGATTTTGATC+GGG + chr8_3:69264896-69264915 None:intergenic 40.0%
GCAGTAGCATGGATCAATTA+AGG + chr8_3:69265186-69265205 None:intergenic 40.0%
TCCATGCTACTGCAATAGAT+TGG - chr8_3:69265193-69265212 Msa1305710:intron 40.0%
TGACTGAGTTTGTCTGTTAG+AGG - chr8_3:69265273-69265292 Msa1305710:intron 40.0%
AACAACATATTCCACTGGTC+AGG + chr8_3:69265342-69265361 None:intergenic 40.0%
CCTACAACAACATATTCCAC+TGG + chr8_3:69265347-69265366 None:intergenic 40.0%
CCAGTGGAATATGTTGTTGT+AGG - chr8_3:69265344-69265363 Msa1305710:intron 40.0%
!!! TCTCTCATGTTTTTTGGGCT+TGG - chr8_3:69265642-69265661 Msa1305710:intron 40.0%
CTCATGTAAGGATTTACTCG+AGG - chr8_3:69265841-69265860 Msa1305710:intron 40.0%
TGTTGCCTATGATGAGAAGA+GGG - chr8_3:69266144-69266163 Msa1305710:intron 40.0%
! ACAGAAAGTATGCAAATCCG+AGG + chr8_3:69266210-69266229 None:intergenic 40.0%
! CTCAACCTGAACTAGTTTCT+AGG - chr8_3:69266241-69266260 Msa1305710:intron 40.0%
CTAGACCTAGAAACTAGTTC+AGG + chr8_3:69266249-69266268 None:intergenic 40.0%
AATCCCTCTTCTCATCATAG+TGG - chr8_3:69266406-69266425 Msa1305710:intron 40.0%
! CTGTTTGGCTTAGACAAAAC+CGG - chr8_3:69266522-69266541 Msa1305710:intron 40.0%
! CTCATTTTCTCCATCAACTG+TGG - chr8_3:69266800-69266819 Msa1305710:intron 40.0%
!! ATTGGGAAAAGTGCTGTCTA+CGG + chr8_3:69266841-69266860 None:intergenic 40.0%
! ATCCTCTAGTTTGATCACTG+AGG - chr8_3:69266865-69266884 Msa1305710:intron 40.0%
CATGACACCACTAGAAATAG+CGG + chr8_3:69266952-69266971 None:intergenic 40.0%
!! GCTATTTCTAGTGGTGTCAT+GGG - chr8_3:69266951-69266970 Msa1305710:intron 40.0%
CAATTAAGCTATGCACCTTG+AGG - chr8_3:69267080-69267099 Msa1305710:intron 40.0%
AAACATTAACCCTGTCCTCA+AGG + chr8_3:69267098-69267117 None:intergenic 40.0%
! GAGGACAGGGTTAATGTTTT+TGG - chr8_3:69267099-69267118 Msa1305710:intron 40.0%
!!! ACAGGGTTAATGTTTTTGGG+TGG - chr8_3:69267103-69267122 Msa1305710:intron 40.0%
!!! CAGGGTTAATGTTTTTGGGT+GGG - chr8_3:69267104-69267123 Msa1305710:intron 40.0%
!!! AGGGTTAATGTTTTTGGGTG+GGG - chr8_3:69267105-69267124 Msa1305710:intron 40.0%
TCAATGCCCTCTTCATTCAT+AGG + chr8_3:69267209-69267228 None:intergenic 40.0%
TGCTAATTAGAACTGGGACT+AGG - chr8_3:69267244-69267263 Msa1305710:intron 40.0%
! AAAGAGTACAACATTGAGGG+TGG - chr8_3:69267677-69267696 Msa1305710:intron 40.0%
TTGAGGGGTGGTAATTAGTA+AGG - chr8_3:69267725-69267744 Msa1305710:intron 40.0%
!! CTTGGTCACTTTCTAGTTCT+TGG - chr8_3:69267788-69267807 Msa1305710:CDS 40.0%
GAGCTTCCTTTCATGTCTTT+AGG + chr8_3:69267839-69267858 None:intergenic 40.0%
GATGCGGAGTATGGGTAATT+GGG + chr8_3:69264260-69264279 None:intergenic 45.0%
CTCGAGAGTGATAGTCTTTC+CGG + chr8_3:69264414-69264433 None:intergenic 45.0%
! GCCAAGATCCAGGTTAGTTA+GGG - chr8_3:69264467-69264486 Msa1305710:three_prime_UTR 45.0%
ACCCTAACTAACCTGGATCT+TGG + chr8_3:69264471-69264490 None:intergenic 45.0%
!!! GTGCCTTTTAGAGTTGGGAA+TGG - chr8_3:69264709-69264728 Msa1305710:intron 45.0%
!! AGTGCTGGCTGATGACTATT+AGG + chr8_3:69264807-69264826 None:intergenic 45.0%
!! TGATCGGGATTTTGACAGCA+AGG + chr8_3:69264881-69264900 None:intergenic 45.0%
ACTCAACTCAGCATCAGTAG+CGG + chr8_3:69264940-69264959 None:intergenic 45.0%
GCCAATCTATTGCAGTAGCA+TGG + chr8_3:69265197-69265216 None:intergenic 45.0%
AACATATTCCACTGGTCAGG+AGG + chr8_3:69265339-69265358 None:intergenic 45.0%
AAAATCAACCTCTGCTGGTC+AGG + chr8_3:69265387-69265406 None:intergenic 45.0%
! GATTTTCGCTGGTAAGCAAC+TGG - chr8_3:69265401-69265420 Msa1305710:intron 45.0%
GTGTTGCCTATGATGAGAAG+AGG - chr8_3:69266143-69266162 Msa1305710:intron 45.0%
CCACCACTATGATGAGAAGA+GGG + chr8_3:69266412-69266431 None:intergenic 45.0%
CCTCTTCTCATCATAGTGGT+GGG - chr8_3:69266410-69266429 Msa1305710:intron 45.0%
TGCTTTGCACCACGATGAAT+CGG + chr8_3:69266440-69266459 None:intergenic 45.0%
TTCATCGTGGTGCAAAGCAT+CGG - chr8_3:69266441-69266460 Msa1305710:intron 45.0%
GAAACTGATGAACAACACCG+AGG + chr8_3:69266476-69266495 None:intergenic 45.0%
! GGAGTATTTCCCACAGTTGA+TGG + chr8_3:69266813-69266832 None:intergenic 45.0%
CTCCTCAGTGATCAAACTAG+AGG + chr8_3:69266870-69266889 None:intergenic 45.0%
!! CGCTATTTCTAGTGGTGTCA+TGG - chr8_3:69266950-69266969 Msa1305710:intron 45.0%
!!! GGGTTAATGTTTTTGGGTGG+GGG - chr8_3:69267106-69267125 Msa1305710:intron 45.0%
!! TGAATGAAGAGGGCATTGAG+AGG - chr8_3:69267210-69267229 Msa1305710:intron 45.0%
!! GAATGAAGAGGGCATTGAGA+GGG - chr8_3:69267211-69267230 Msa1305710:intron 45.0%
!! TTCACTTGGTGCTTGCATTG+AGG - chr8_3:69267708-69267727 Msa1305710:intron 45.0%
!! TCACTTGGTGCTTGCATTGA+GGG - chr8_3:69267709-69267728 Msa1305710:intron 45.0%
TCTATACTCGTCCATCTCTG+AGG - chr8_3:69267857-69267876 Msa1305710:exon 45.0%
!!! ATTTTTTTTCTTAATTATAT+TGG - chr8_3:69267573-69267592 Msa1305710:intron 5.0%
TTGAAGCAACTACCCTGTGG+CGG + chr8_3:69264234-69264253 None:intergenic 50.0%
CGATGCGGAGTATGGGTAAT+TGG + chr8_3:69264261-69264280 None:intergenic 50.0%
GTTTGAGCGATGCGGAGTAT+GGG + chr8_3:69264268-69264287 None:intergenic 50.0%
AGTTTGAGCGATGCGGAGTA+TGG + chr8_3:69264269-69264288 None:intergenic 50.0%
CGGAAAGACTATCACTCTCG+AGG - chr8_3:69264412-69264431 Msa1305710:three_prime_UTR 50.0%
! GGCCAAGATCCAGGTTAGTT+AGG - chr8_3:69264466-69264485 Msa1305710:three_prime_UTR 50.0%
CAGCGAAAATCAACCTCTGC+TGG + chr8_3:69265392-69265411 None:intergenic 50.0%
!! CAGCAGAGGTTGATTTTCGC+TGG - chr8_3:69265390-69265409 Msa1305710:intron 50.0%
GCTGGTAAGCAACTGGAAGA+TGG - chr8_3:69265408-69265427 Msa1305710:intron 50.0%
CAACTCTTCACTTGGTCCTG+AGG - chr8_3:69265466-69265485 Msa1305710:intron 50.0%
GGATTTACTCGAGGATCACG+TGG - chr8_3:69265850-69265869 Msa1305710:intron 50.0%
CCCTCTTCTCATCATAGTGG+TGG - chr8_3:69266409-69266428 Msa1305710:intron 50.0%
CCCACCACTATGATGAGAAG+AGG + chr8_3:69266413-69266432 None:intergenic 50.0%
TTTGCACCACGATGAATCGG+AGG + chr8_3:69266437-69266456 None:intergenic 50.0%
! AGCATCGGAGTTCTGTTCCT+CGG - chr8_3:69266456-69266475 Msa1305710:intron 50.0%
AAGCTATGCACCTTGAGGAC+AGG - chr8_3:69267085-69267104 Msa1305710:intron 50.0%
AGCTATGCACCTTGAGGACA+GGG - chr8_3:69267086-69267105 Msa1305710:intron 50.0%
!! TTGGGTGGGGGAGTATTGAT+AGG - chr8_3:69267118-69267137 Msa1305710:intron 50.0%
! GGCATTGAGAGGGAGTCATT+TGG - chr8_3:69267221-69267240 Msa1305710:intron 50.0%
!! CACCTGTTGTAACTTGCTGC+AGG - chr8_3:69267612-69267631 Msa1305710:intron 50.0%
AGCCTGCAGCAAGTTACAAC+AGG + chr8_3:69267617-69267636 None:intergenic 50.0%
TGCTGCAGGCTCATATATGC+TGG - chr8_3:69267626-69267645 Msa1305710:intron 50.0%
!! CACTTGGTGCTTGCATTGAG+GGG - chr8_3:69267710-69267729 Msa1305710:intron 50.0%
TAGAAACGGAATCCCGCCAC+AGG - chr8_3:69264218-69264237 Msa1305710:three_prime_UTR 55.0%
AGAAACGGAATCCCGCCACA+GGG - chr8_3:69264219-69264238 Msa1305710:three_prime_UTR 55.0%
TGAAGCAACTACCCTGTGGC+GGG + chr8_3:69264233-69264252 None:intergenic 55.0%
CGACACCATCGACAACGTCA+AGG - chr8_3:69264445-69264464 Msa1305710:three_prime_UTR 55.0%
!! CTTGGCCTTGACGTTGTCGA+TGG + chr8_3:69264453-69264472 None:intergenic 55.0%
CAACGTCAAGGCCAAGATCC+AGG - chr8_3:69264457-69264476 Msa1305710:three_prime_UTR 55.0%
GCATCATTCCTCCTGACCAG+TGG - chr8_3:69265328-69265347 Msa1305710:intron 55.0%
TCAACCTCTGCTGGTCAGGA+GGG + chr8_3:69265383-69265402 None:intergenic 55.0%
ATCAACCTCTGCTGGTCAGG+AGG + chr8_3:69265384-69265403 None:intergenic 55.0%
TTCACTTGGTCCTGAGGCTC+AGG - chr8_3:69265472-69265491 Msa1305710:intron 55.0%
TCACTTGGTCCTGAGGCTCA+GGG - chr8_3:69265473-69265492 Msa1305710:intron 55.0%
GAATTCCACCTGTGCAGCAG+AGG - chr8_3:69265604-69265623 Msa1305710:intron 55.0%
AGAGAGAACCTCTGCTGCAC+AGG + chr8_3:69265615-69265634 None:intergenic 55.0%
ACTCGAGGATCACGTGGTCT+AGG - chr8_3:69265856-69265875 Msa1305710:intron 55.0%
!! AAAGTGCTGTCTACGGCGGA+TGG + chr8_3:69266834-69266853 None:intergenic 55.0%
!! GGGAAAAGTGCTGTCTACGG+CGG + chr8_3:69266838-69266857 None:intergenic 55.0%
! GGGTGGTTCTGTGCTTCACT+TGG - chr8_3:69267694-69267713 Msa1305710:intron 55.0%
! TTGGTGCTTGCATTGAGGGG+TGG - chr8_3:69267713-69267732 Msa1305710:intron 55.0%
CACTTGGTCCTGAGGCTCAG+GGG - chr8_3:69265474-69265493 Msa1305710:intron 60.0%
GAGAACCTCTGCTGCACAGG+TGG + chr8_3:69265612-69265631 None:intergenic 60.0%
GTGGGTCCTCCGATTCATCG+TGG - chr8_3:69266428-69266447 Msa1305710:intron 60.0%
GCATCCCTCCTGACCAGCAG+AGG - chr8_3:69265376-69265395 Msa1305710:intron 65.0%
TTGGTCCTGAGGCTCAGGGG+AGG - chr8_3:69265477-69265496 Msa1305710:intron 65.0%
TGGTTCCTCCCCTGAGCCTC+AGG + chr8_3:69265485-69265504 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 69264205 69268045 69264205 ID=Msa1305710;Name=Msa1305710
chr8_3 mRNA 69264205 69268045 69264205 ID=Msa1305710-mRNA-1;Parent=Msa1305710;Name=Msa1305710-mRNA-1;_AED=0.14;_eAED=0.14;_QI=181|0.5|0.66|1|1|1|3|303|90
chr8_3 exon 69264205 69264616 69264205 ID=Msa1305710-mRNA-1:exon:21482;Parent=Msa1305710-mRNA-1
chr8_3 exon 69266625 69266695 69266625 ID=Msa1305710-mRNA-1:exon:21481;Parent=Msa1305710-mRNA-1
chr8_3 exon 69267772 69268045 69267772 ID=Msa1305710-mRNA-1:exon:21480;Parent=Msa1305710-mRNA-1
chr8_3 five_prime_UTR 69267865 69268045 69267865 ID=Msa1305710-mRNA-1:five_prime_utr;Parent=Msa1305710-mRNA-1
chr8_3 CDS 69267772 69267864 69267772 ID=Msa1305710-mRNA-1:cds;Parent=Msa1305710-mRNA-1
chr8_3 CDS 69266625 69266695 69266625 ID=Msa1305710-mRNA-1:cds;Parent=Msa1305710-mRNA-1
chr8_3 CDS 69264508 69264616 69264508 ID=Msa1305710-mRNA-1:cds;Parent=Msa1305710-mRNA-1
chr8_3 three_prime_UTR 69264205 69264507 69264205 ID=Msa1305710-mRNA-1:three_prime_utr;Parent=Msa1305710-mRNA-1
Gene Sequence

>Msa1305710

ATGCAGATCTTCGTCAAAACTTTGACCGGAAAGACTATCACTCTCGAGGTTGAGAGTAGCGACACCATCGACAACGTCAAGGCCAAGATCCAGCCAACTGATACAATTGATCGTATCAAGGAACGTGTTGAAGAAAAAGAAGGAATTCCACCTGTGCAGCAGAGGCTCATATATGCTGGTAAGCAGCTTGCTGATGACAAAACAGCTAAAGAGTACAACATTGAGGGTGGTTCTGTGCTTCACTTGGTGCTTGCATTGAGGGGTGGTAATTAG
Protein sequence

>Msa1305710

MQIFVKTLTGKTITLEVESSDTIDNVKAKIQPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKEYNIEGGSVLHLVLALRGGN*