Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1239910 | XP_003623155.2 | 97.980 | 99 | 2 | 0 | 1 | 99 | 1 | 99 | 7.35e-62 | 193 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1239910 | sp|Q9SI54|LSM7_ARATH | 91.837 | 98 | 8 | 0 | 1 | 98 | 1 | 98 | 4.27e-60 | 181 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1239910 | G7L5K6 | 97.980 | 99 | 2 | 0 | 1 | 99 | 1 | 99 | 3.51e-62 | 193 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001450 | Msa1239910 | 0.831773 | 1.380239e-55 | -8.615850e-47 |
| Msa0006380 | Msa1239910 | 0.816887 | 4.385853e-52 | -8.615850e-47 |
| Msa0008410 | Msa1239910 | 0.820244 | 7.598772e-53 | -8.615850e-47 |
| Msa0015300 | Msa1239910 | 0.807330 | 5.327800e-50 | -8.615850e-47 |
| Msa0025730 | Msa1239910 | 0.808046 | 3.754674e-50 | -8.615850e-47 |
| Msa0027260 | Msa1239910 | 0.808435 | 3.101122e-50 | -8.615850e-47 |
| Msa0031340 | Msa1239910 | 0.811632 | 6.353756e-51 | -8.615850e-47 |
| Msa0032260 | Msa1239910 | 0.805778 | 1.132505e-49 | -8.615850e-47 |
| Msa0046740 | Msa1239910 | 0.827177 | 1.806447e-54 | -8.615850e-47 |
| Msa0056470 | Msa1239910 | 0.832933 | 7.123732e-56 | -8.615850e-47 |
| Msa0064350 | Msa1239910 | 0.878178 | 3.465505e-69 | -8.615850e-47 |
| Msa0064380 | Msa1239910 | 0.856307 | 3.514173e-62 | -8.615850e-47 |
| Msa0072420 | Msa1239910 | 0.811318 | 7.432880e-51 | -8.615850e-47 |
| Msa0090520 | Msa1239910 | 0.809972 | 1.452937e-50 | -8.615850e-47 |
| Msa0115990 | Msa1239910 | 0.826548 | 2.554409e-54 | -8.615850e-47 |
| Msa0613920 | Msa1239910 | 0.810908 | 9.121418e-51 | -8.615850e-47 |
| Msa0626010 | Msa1239910 | 0.803997 | 2.669148e-49 | -8.615850e-47 |
| Msa0639310 | Msa1239910 | 0.812501 | 4.107500e-51 | -8.615850e-47 |
| Msa0647500 | Msa1239910 | 0.801638 | 8.193452e-49 | -8.615850e-47 |
| Msa0649490 | Msa1239910 | 0.821017 | 5.049414e-53 | -8.615850e-47 |
| Msa0651050 | Msa1239910 | 0.843120 | 1.703910e-58 | -8.615850e-47 |
| Msa0657580 | Msa1239910 | 0.815565 | 8.663194e-52 | -8.615850e-47 |
| Msa0661300 | Msa1239910 | 0.818468 | 1.929257e-52 | -8.615850e-47 |
| Msa0663900 | Msa1239910 | 0.830916 | 2.243159e-55 | -8.615850e-47 |
| Msa0666270 | Msa1239910 | 0.828179 | 1.038308e-54 | -8.615850e-47 |
| Msa0687630 | Msa1239910 | 0.814772 | 1.299673e-51 | -8.615850e-47 |
| Msa0690150 | Msa1239910 | 0.806910 | 6.540525e-50 | -8.615850e-47 |
| Msa0692840 | Msa1239910 | 0.829671 | 4.517963e-55 | -8.615850e-47 |
| Msa0692940 | Msa1239910 | 0.800227 | 1.590708e-48 | -8.615850e-47 |
| Msa0709400 | Msa1239910 | 0.826643 | 2.423589e-54 | -8.615850e-47 |
| Msa0720820 | Msa1239910 | 0.804889 | 1.739625e-49 | -8.615850e-47 |
| Msa0761940 | Msa1239910 | 0.828516 | 8.606748e-55 | -8.615850e-47 |
| Msa0784200 | Msa1239910 | 0.807347 | 5.283169e-50 | -8.615850e-47 |
| Msa0801110 | Msa1239910 | 0.833899 | 4.090817e-56 | -8.615850e-47 |
| Msa0803890 | Msa1239910 | 0.819831 | 9.445665e-53 | -8.615850e-47 |
| Msa0818310 | Msa1239910 | 0.819627 | 1.051697e-52 | -8.615850e-47 |
| Msa0841940 | Msa1239910 | 0.818065 | 2.380596e-52 | -8.615850e-47 |
| Msa0123560 | Msa1239910 | 0.838822 | 2.288185e-57 | -8.615850e-47 |
| Msa0125540 | Msa1239910 | 0.808910 | 2.455112e-50 | -8.615850e-47 |
| Msa0127310 | Msa1239910 | 0.806109 | 9.651259e-50 | -8.615850e-47 |
| Msa0137990 | Msa1239910 | 0.812732 | 3.655457e-51 | -8.615850e-47 |
| Msa0140110 | Msa1239910 | 0.831462 | 1.646710e-55 | -8.615850e-47 |
| Msa0140650 | Msa1239910 | 0.817669 | 2.924948e-52 | -8.615850e-47 |
| Msa0140820 | Msa1239910 | 0.847334 | 1.234796e-59 | -8.615850e-47 |
| Msa0149190 | Msa1239910 | 0.808210 | 3.464073e-50 | -8.615850e-47 |
| Msa0149200 | Msa1239910 | 0.800909 | 1.155274e-48 | -8.615850e-47 |
| Msa0150800 | Msa1239910 | 0.810671 | 1.026685e-50 | -8.615850e-47 |
| Msa0182620 | Msa1239910 | -0.809120 | 2.213309e-50 | -8.615850e-47 |
| Msa0183900 | Msa1239910 | 0.815009 | 1.151071e-51 | -8.615850e-47 |
| Msa0191050 | Msa1239910 | 0.840690 | 7.469834e-58 | -8.615850e-47 |
| Msa0194950 | Msa1239910 | -0.808144 | 3.577166e-50 | -8.615850e-47 |
| Msa0195630 | Msa1239910 | 0.816660 | 4.930488e-52 | -8.615850e-47 |
| Msa0209350 | Msa1239910 | 0.802224 | 6.210124e-49 | -8.615850e-47 |
| Msa0216240 | Msa1239910 | 0.800058 | 1.722222e-48 | -8.615850e-47 |
| Msa0231650 | Msa1239910 | 0.801239 | 9.891725e-49 | -8.615850e-47 |
| Msa0231880 | Msa1239910 | 0.809788 | 1.591343e-50 | -8.615850e-47 |
| Msa0231980 | Msa1239910 | 0.817373 | 3.411495e-52 | -8.615850e-47 |
| Msa0232050 | Msa1239910 | 0.814228 | 1.713964e-51 | -8.615850e-47 |
| Msa0233350 | Msa1239910 | 0.830810 | 2.381682e-55 | -8.615850e-47 |
| Msa0237410 | Msa1239910 | 0.825240 | 5.220664e-54 | -8.615850e-47 |
| Msa1239910 | Msa1244600 | 0.824657 | 7.169648e-54 | -8.615850e-47 |
| Msa1239910 | Msa1251160 | 0.815718 | 8.008059e-52 | -8.615850e-47 |
| Msa1239910 | Msa1254730 | 0.809802 | 1.580263e-50 | -8.615850e-47 |
| Msa1239910 | Msa1256470 | 0.834863 | 2.344097e-56 | -8.615850e-47 |
| Msa1239910 | Msa1257510 | 0.812020 | 5.231623e-51 | -8.615850e-47 |
| Msa1239910 | Msa1267430 | 0.809369 | 1.958176e-50 | -8.615850e-47 |
| Msa1239910 | Msa1269300 | 0.801220 | 9.978993e-49 | -8.615850e-47 |
| Msa1239910 | Msa1275540 | 0.808972 | 2.381578e-50 | -8.615850e-47 |
| Msa1239910 | Msa1279400 | 0.812217 | 4.737488e-51 | -8.615850e-47 |
| Msa1239910 | Msa1283170 | 0.820580 | 6.361723e-53 | -8.615850e-47 |
| Msa1239910 | Msa1304820 | 0.811704 | 6.129392e-51 | -8.615850e-47 |
| Msa1239910 | Msa1307950 | 0.813908 | 2.017353e-51 | -8.615850e-47 |
| Msa1239910 | Msa1320390 | 0.906289 | 1.739808e-80 | -8.615850e-47 |
| Msa1239910 | Msa1333110 | 0.801392 | 9.199470e-49 | -8.615850e-47 |
| Msa1239910 | Msa1357620 | 0.835261 | 1.860495e-56 | -8.615850e-47 |
| Msa1239910 | Msa1361100 | 0.820912 | 5.337210e-53 | -8.615850e-47 |
| Msa1239910 | Msa1367590 | 0.803012 | 4.270480e-49 | -8.615850e-47 |
| Msa1239910 | Msa1376650 | 0.831109 | 2.010633e-55 | -8.615850e-47 |
| Msa1239910 | Msa1377500 | 0.818959 | 1.492924e-52 | -8.615850e-47 |
| Msa1239910 | Msa1393740 | 0.817155 | 3.819232e-52 | -8.615850e-47 |
| Msa1239910 | Msa1394500 | 0.805923 | 1.055914e-49 | -8.615850e-47 |
| Msa1239910 | Msa1402420 | -0.812767 | 3.591306e-51 | -8.615850e-47 |
| Msa1239910 | Msa1404190 | 0.807642 | 4.575257e-50 | -8.615850e-47 |
| Msa1239910 | Msa1418340 | 0.817808 | 2.720961e-52 | -8.615850e-47 |
| Msa1239910 | Msa1422580 | 0.815239 | 1.023646e-51 | -8.615850e-47 |
| Msa1239910 | Msa1451160 | 0.805105 | 1.567136e-49 | -8.615850e-47 |
| Msa1239910 | Msa1451550 | 0.801915 | 7.188789e-49 | -8.615850e-47 |
| Msa1239910 | Msa1451560 | 0.835213 | 1.912221e-56 | -8.615850e-47 |
| Msa1239910 | Msa1453080 | 0.800198 | 1.612442e-48 | -8.615850e-47 |
| Msa1239910 | Msa1456050 | 0.818401 | 1.997903e-52 | -8.615850e-47 |
| Msa1239910 | Msa1457910 | 0.803440 | 3.482514e-49 | -8.615850e-47 |
| Msa1239910 | Msa1461280 | 0.818357 | 2.044615e-52 | -8.615850e-47 |
| Msa1239910 | Msa1462290 | 0.808463 | 3.059191e-50 | -8.615850e-47 |
| Msa1239910 | Msa1465080 | 0.803114 | 4.067996e-49 | -8.615850e-47 |
| Msa0366890 | Msa1239910 | 0.830881 | 2.287082e-55 | -8.615850e-47 |
| Msa0369450 | Msa1239910 | 0.814113 | 1.817571e-51 | -8.615850e-47 |
| Msa0376310 | Msa1239910 | 0.814092 | 1.837496e-51 | -8.615850e-47 |
| Msa0380300 | Msa1239910 | 0.831803 | 1.356740e-55 | -8.615850e-47 |
| Msa0385580 | Msa1239910 | 0.810713 | 1.005207e-50 | -8.615850e-47 |
| Msa0387730 | Msa1239910 | 0.801797 | 7.600814e-49 | -8.615850e-47 |
| Msa0414800 | Msa1239910 | 0.814289 | 1.661747e-51 | -8.615850e-47 |
| Msa0415430 | Msa1239910 | 0.831553 | 1.564178e-55 | -8.615850e-47 |
| Msa0416300 | Msa1239910 | 0.817508 | 3.180109e-52 | -8.615850e-47 |
| Msa0427150 | Msa1239910 | 0.801993 | 6.926306e-49 | -8.615850e-47 |
| Msa0432210 | Msa1239910 | 0.819691 | 1.016775e-52 | -8.615850e-47 |
| Msa0436050 | Msa1239910 | 0.800255 | 1.570191e-48 | -8.615850e-47 |
| Msa0436490 | Msa1239910 | -0.801550 | 8.540880e-49 | -8.615850e-47 |
| Msa0439200 | Msa1239910 | 0.832265 | 1.042996e-55 | -8.615850e-47 |
| Msa0444350 | Msa1239910 | 0.812036 | 5.188021e-51 | -8.615850e-47 |
| Msa0471440 | Msa1239910 | 0.826223 | 3.051807e-54 | -8.615850e-47 |
| Msa0479820 | Msa1239910 | 0.820718 | 5.916528e-53 | -8.615850e-47 |
| Msa0481480 | Msa1239910 | 0.817932 | 2.551824e-52 | -8.615850e-47 |
| Msa1012320 | Msa1239910 | 0.831976 | 1.230194e-55 | -8.615850e-47 |
| Msa1013040 | Msa1239910 | 0.819493 | 1.128456e-52 | -8.615850e-47 |
| Msa1013400 | Msa1239910 | 0.831322 | 1.782352e-55 | -8.615850e-47 |
| Msa1034890 | Msa1239910 | 0.821069 | 4.911558e-53 | -8.615850e-47 |
| Msa1040400 | Msa1239910 | 0.840203 | 1.001545e-57 | -8.615850e-47 |
| Msa1046020 | Msa1239910 | 0.810920 | 9.066334e-51 | -8.615850e-47 |
| Msa1046060 | Msa1239910 | 0.804532 | 2.064567e-49 | -8.615850e-47 |
| Msa1052290 | Msa1239910 | 0.802125 | 6.505967e-49 | -8.615850e-47 |
| Msa1063510 | Msa1239910 | 0.809561 | 1.780676e-50 | -8.615850e-47 |
| Msa1074930 | Msa1239910 | 0.804093 | 2.549073e-49 | -8.615850e-47 |
| Msa1078270 | Msa1239910 | 0.814214 | 1.726859e-51 | -8.615850e-47 |
| Msa1081150 | Msa1239910 | 0.806152 | 9.451553e-50 | -8.615850e-47 |
| Msa1081360 | Msa1239910 | -0.828495 | 8.711075e-55 | -8.615850e-47 |
| Msa1081930 | Msa1239910 | 0.817665 | 2.931687e-52 | -8.615850e-47 |
| Msa1083150 | Msa1239910 | 0.818985 | 1.472628e-52 | -8.615850e-47 |
| Msa1091100 | Msa1239910 | 0.801865 | 7.360292e-49 | -8.615850e-47 |
| Msa1093530 | Msa1239910 | 0.825865 | 3.712709e-54 | -8.615850e-47 |
| Msa0242410 | Msa1239910 | 0.806200 | 9.233301e-50 | -8.615850e-47 |
| Msa0267970 | Msa1239910 | 0.811299 | 7.503382e-51 | -8.615850e-47 |
| Msa0272300 | Msa1239910 | 0.806656 | 7.400098e-50 | -8.615850e-47 |
| Msa0273900 | Msa1239910 | 0.808355 | 3.226358e-50 | -8.615850e-47 |
| Msa0291500 | Msa1239910 | 0.856653 | 2.782453e-62 | -8.615850e-47 |
| Msa0311700 | Msa1239910 | 0.813821 | 2.108302e-51 | -8.615850e-47 |
| Msa0312650 | Msa1239910 | 0.825732 | 3.993594e-54 | -8.615850e-47 |
| Msa0314720 | Msa1239910 | 0.823269 | 1.516759e-53 | -8.615850e-47 |
| Msa0315440 | Msa1239910 | -0.805438 | 1.334988e-49 | -8.615850e-47 |
| Msa0329350 | Msa1239910 | 0.831028 | 2.105478e-55 | -8.615850e-47 |
| Msa0334360 | Msa1239910 | 0.825766 | 3.919220e-54 | -8.615850e-47 |
| Msa0346430 | Msa1239910 | 0.803375 | 3.592623e-49 | -8.615850e-47 |
| Msa0356960 | Msa1239910 | 0.801975 | 6.987670e-49 | -8.615850e-47 |
| Msa1124960 | Msa1239910 | 0.815923 | 7.208823e-52 | -8.615850e-47 |
| Msa1126510 | Msa1239910 | 0.830904 | 2.257863e-55 | -8.615850e-47 |
| Msa1126770 | Msa1239910 | 0.830903 | 2.259260e-55 | -8.615850e-47 |
| Msa1127890 | Msa1239910 | 0.828400 | 9.180736e-55 | -8.615850e-47 |
| Msa1130980 | Msa1239910 | 0.816002 | 6.919863e-52 | -8.615850e-47 |
| Msa1134110 | Msa1239910 | 0.827903 | 1.209851e-54 | -8.615850e-47 |
| Msa1165870 | Msa1239910 | 0.832907 | 7.231531e-56 | -8.615850e-47 |
| Msa1165940 | Msa1239910 | 0.854929 | 8.868095e-62 | -8.615850e-47 |
| Msa1166860 | Msa1239910 | 0.818349 | 2.053731e-52 | -8.615850e-47 |
| Msa1169770 | Msa1239910 | 0.814502 | 1.491104e-51 | -8.615850e-47 |
| Msa1199990 | Msa1239910 | 0.803051 | 4.192923e-49 | -8.615850e-47 |
| Msa1204250 | Msa1239910 | 0.801118 | 1.046896e-48 | -8.615850e-47 |
| Msa1207270 | Msa1239910 | 0.831943 | 1.253481e-55 | -8.615850e-47 |
| Msa1209010 | Msa1239910 | 0.817896 | 2.599995e-52 | -8.615850e-47 |
| Msa1218600 | Msa1239910 | 0.834611 | 2.712366e-56 | -8.615850e-47 |
| Msa0485850 | Msa1239910 | 0.820215 | 7.715797e-53 | -8.615850e-47 |
| Msa0493480 | Msa1239910 | 0.804964 | 1.677346e-49 | -8.615850e-47 |
| Msa0521050 | Msa1239910 | 0.884570 | 1.712417e-71 | -8.615850e-47 |
| Msa0524500 | Msa1239910 | 0.822590 | 2.183295e-53 | -8.615850e-47 |
| Msa0531530 | Msa1239910 | 0.804444 | 2.153827e-49 | -8.615850e-47 |
| Msa0548240 | Msa1239910 | 0.838218 | 3.277358e-57 | -8.615850e-47 |
| Msa0552810 | Msa1239910 | 0.851906 | 6.538251e-61 | -8.615850e-47 |
| Msa0566700 | Msa1239910 | 0.800890 | 1.165566e-48 | -8.615850e-47 |
| Msa0581070 | Msa1239910 | 0.815225 | 1.030792e-51 | -8.615850e-47 |
| Msa0849510 | Msa1239910 | 0.810217 | 1.286266e-50 | -8.615850e-47 |
| Msa0858770 | Msa1239910 | 0.814316 | 1.639536e-51 | -8.615850e-47 |
| Msa0881460 | Msa1239910 | 0.821469 | 3.970579e-53 | -8.615850e-47 |
| Msa0884410 | Msa1239910 | -0.806269 | 8.928629e-50 | -8.615850e-47 |
| Msa0902760 | Msa1239910 | 0.825501 | 4.529036e-54 | -8.615850e-47 |
| Msa0925440 | Msa1239910 | 0.814768 | 1.302181e-51 | -8.615850e-47 |
| Msa0963270 | Msa1239910 | 0.823126 | 1.638317e-53 | -8.615850e-47 |
| Msa0968590 | Msa1239910 | 0.810560 | 1.084775e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1239910 | MtrunA17_Chr7g0240391 | 97.980 | 99 | 2 | 0 | 1 | 99 | 1 | 99 | 6.76e-66 | 193 |
| Msa1239910 | MtrunA17_Chr8g0351841 | 97.980 | 99 | 2 | 0 | 1 | 99 | 1 | 99 | 2.29e-65 | 192 |
| Msa1239910 | MtrunA17_Chr7g0266561 | 38.028 | 71 | 35 | 1 | 10 | 80 | 9 | 70 | 8.36e-13 | 58.5 |
| Msa1239910 | MtrunA17_Chr6g0477821 | 38.028 | 71 | 35 | 1 | 10 | 80 | 9 | 70 | 1.14e-12 | 58.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1239910 | AT2G03870.2 | 91.837 | 98 | 8 | 0 | 1 | 98 | 1 | 98 | 4.34e-61 | 181 |
| Msa1239910 | AT2G03870.1 | 91.837 | 98 | 8 | 0 | 1 | 98 | 1 | 98 | 4.34e-61 | 181 |
| Msa1239910 | AT2G23930.1 | 42.254 | 71 | 32 | 2 | 10 | 80 | 9 | 70 | 3.85e-13 | 59.7 |
| Msa1239910 | AT3G11500.2 | 39.437 | 71 | 34 | 1 | 10 | 80 | 9 | 70 | 2.31e-12 | 57.8 |
| Msa1239910 | AT3G11500.1 | 39.437 | 71 | 34 | 1 | 10 | 80 | 9 | 70 | 2.31e-12 | 57.8 |
Find 43 sgRNAs with CRISPR-Local
Find 223 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACGGTTCACTGTTTGAAAA+TGG | 0.268324 | 8_2:+22034829 | None:intergenic |
| GTAGTGACAGGTACTCTAAA+AGG | 0.295589 | 8_2:-22032589 | Msa1239910:intron |
| TTAGCAAAATTTGTTGATAA+AGG | 0.301879 | 8_2:-22034625 | Msa1239910:CDS |
| TTGTCGCAATGCAGGTTTGC+AGG | 0.321708 | 8_2:-22030709 | Msa1239910:intron |
| TACAATTAAGCCAAGACTTC+TGG | 0.324979 | 8_2:+22031382 | None:intergenic |
| GGTGTTCAAGTCAAGCTTAC+TGG | 0.353916 | 8_2:-22034604 | Msa1239910:CDS |
| ATACCTTCTATGTTGCTAAC+CGG | 0.362506 | 8_2:-22030586 | Msa1239910:three_prime_UTR |
| TCTTGAGGCAGATGGGGCCT+AGG | 0.394260 | 8_2:-22030627 | Msa1239910:exon |
| CCAGGACAAGGTTAAGTAAC+TGG | 0.396790 | 8_2:+22032560 | None:intergenic |
| AACCCCTTTCTTGAGGCAGA+TGG | 0.424251 | 8_2:-22030635 | Msa1239910:CDS |
| TGGGAGGAAAGAAACTGTTC+TGG | 0.428213 | 8_2:-22034650 | Msa1239910:CDS |
| ACCCCTTTCTTGAGGCAGAT+GGG | 0.434443 | 8_2:-22030634 | Msa1239910:CDS |
| GCCCCATCTGCCTCAAGAAA+GGG | 0.437926 | 8_2:+22030632 | None:intergenic |
| ACTTGTCCAGATTCTTAAGA+AGG | 0.477205 | 8_2:+22030359 | None:intergenic |
| GGCCCCATCTGCCTCAAGAA+AGG | 0.483618 | 8_2:+22030631 | None:intergenic |
| CCCCTTTCTTGAGGCAGATG+GGG | 0.490206 | 8_2:-22030633 | Msa1239910:CDS |
| CCAGTTACTTAACCTTGTCC+TGG | 0.506664 | 8_2:-22032560 | Msa1239910:CDS |
| GACCCGGTTAGCAACATAGA+AGG | 0.513840 | 8_2:+22030583 | None:intergenic |
| AAAGTAAAGTGTTAATACAT+AGG | 0.514292 | 8_2:+22030508 | None:intergenic |
| TGTCGCAATGCAGGTTTGCA+GGG | 0.521696 | 8_2:-22030708 | Msa1239910:intron |
| TACCTTCTATGTTGCTAACC+GGG | 0.523052 | 8_2:-22030585 | Msa1239910:three_prime_UTR |
| TAGTGACAGGTACTCTAAAA+GGG | 0.532671 | 8_2:-22032588 | Msa1239910:CDS |
| ACAGATCAGACCAGAAGTCT+TGG | 0.544721 | 8_2:-22031392 | Msa1239910:CDS |
| AAGCTTACTGGTGGCAGACA+AGG | 0.544738 | 8_2:-22034592 | Msa1239910:intron |
| AACCATCATTGTGATCTACT+TGG | 0.547967 | 8_2:-22030543 | Msa1239910:three_prime_UTR |
| AATACTACTGTCTACTTACA+CGG | 0.555628 | 8_2:+22034901 | None:intergenic |
| AAAACTCAACAGCTTCATCC+AGG | 0.561824 | 8_2:+22032542 | None:intergenic |
| TATAATGCGAGTTCAGATGC+TGG | 0.562375 | 8_2:-22030437 | Msa1239910:three_prime_UTR |
| TACCAAGTAGATCACAATGA+TGG | 0.584310 | 8_2:+22030541 | None:intergenic |
| ATGCTTGTGTCGCCAACTGA+TGG | 0.586363 | 8_2:-22030674 | Msa1239910:CDS |
| GTCGCAATGCAGGTTTGCAG+GGG | 0.591955 | 8_2:-22030707 | Msa1239910:intron |
| TTATACACACATTTACACCT+AGG | 0.592919 | 8_2:+22030610 | None:intergenic |
| TGTGTCGCCAACTGATGGTA+CGG | 0.598668 | 8_2:-22030669 | Msa1239910:CDS |
| GATTGCGAACCCCTTTCTTG+AGG | 0.613579 | 8_2:-22030642 | Msa1239910:CDS |
| ATCTCGTCCGTACCATCAGT+TGG | 0.614027 | 8_2:+22030662 | None:intergenic |
| GACTTGCAAAACTTCAAACA+TGG | 0.629035 | 8_2:-22034801 | Msa1239910:intron |
| CCCCATCTGCCTCAAGAAAG+GGG | 0.629232 | 8_2:+22030633 | None:intergenic |
| AAGTAGATCACAATGATGGT+TGG | 0.646184 | 8_2:+22030545 | None:intergenic |
| CAACAGCTTCATCCAGGACA+AGG | 0.654174 | 8_2:+22032548 | None:intergenic |
| ATACTACTGTCTACTTACAC+GGG | 0.654666 | 8_2:+22034902 | None:intergenic |
| GTTCAAGTCAAGCTTACTGG+TGG | 0.669583 | 8_2:-22034601 | Msa1239910:CDS |
| GTAACTAAAATGACGAGACC+CGG | 0.671166 | 8_2:+22030567 | None:intergenic |
| ATAATGCGAGTTCAGATGCT+GGG | 0.671997 | 8_2:-22030436 | Msa1239910:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAATAAAGAAAAGAAATT+AGG | + | chr8_2:22030578-22030597 | None:intergenic | 10.0% |
| !! | AAATAAAATAAAAAAGAGAA+AGG | + | chr8_2:22030707-22030726 | None:intergenic | 10.0% |
| !! | TTGATTTAACAATAAATTTA+AGG | - | chr8_2:22031320-22031339 | Msa1239910:intron | 10.0% |
| !!! | AAATTTTTTTATTCAAAAGA+TGG | + | chr8_2:22031672-22031691 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTGTTTTGTTTTA+AGG | - | chr8_2:22032055-22032074 | Msa1239910:intron | 10.0% |
| !! | CAAAAAAAAAAAAAAAAACA+TGG | + | chr8_2:22032773-22032792 | None:intergenic | 10.0% |
| !!! | TTTATTTTATTTTTCAGTCT+GGG | - | chr8_2:22030589-22030608 | Msa1239910:three_prime_UTR | 15.0% |
| !! | TTTAAGAAAATGAAAATGTT+TGG | + | chr8_2:22031547-22031566 | None:intergenic | 15.0% |
| !!! | TTGATTTGCTTTTAATATTA+TGG | - | chr8_2:22031814-22031833 | Msa1239910:intron | 15.0% |
| !! | TATTTATTTCAATGTGTTAT+AGG | + | chr8_2:22032922-22032941 | None:intergenic | 15.0% |
| !!! | TTTGTTTTTGAAGAAAAAAA+GGG | - | chr8_2:22033010-22033029 | Msa1239910:intron | 15.0% |
| !!! | AAATGTTTTCTTATTTGTTT+TGG | - | chr8_2:22033355-22033374 | Msa1239910:intron | 15.0% |
| !!! | TTATGTTTTTAAAAAAGAGA+AGG | + | chr8_2:22033923-22033942 | None:intergenic | 15.0% |
| !!! | CAAAATTCATATATTTGTTT+TGG | + | chr8_2:22034474-22034493 | None:intergenic | 15.0% |
| !!! | CTTTATTTTATTTTTCAGTC+TGG | - | chr8_2:22030588-22030607 | Msa1239910:three_prime_UTR | 20.0% |
| !!! | TTAGCAAAATTTGTTGATAA+AGG | - | chr8_2:22030633-22030652 | Msa1239910:CDS | 20.0% |
| !!! | TCTTATCATTAAATTGATTC+TGG | - | chr8_2:22030738-22030757 | Msa1239910:intron | 20.0% |
| !! | AATGTAAAATGATACATGTT+TGG | - | chr8_2:22031280-22031299 | Msa1239910:intron | 20.0% |
| !! | GAATTGAATTTATGATGTTT+GGG | + | chr8_2:22031434-22031453 | None:intergenic | 20.0% |
| !! | AGAATTGAATTTATGATGTT+TGG | + | chr8_2:22031435-22031454 | None:intergenic | 20.0% |
| !!! | ATAATTGATTTTGACATGTT+TGG | + | chr8_2:22031497-22031516 | None:intergenic | 20.0% |
| !!! | TTATGGATATTCTTATTTGT+AGG | - | chr8_2:22031831-22031850 | Msa1239910:intron | 20.0% |
| !! | AACAAAAAAAAACATACACA+AGG | + | chr8_2:22032047-22032066 | None:intergenic | 20.0% |
| !!! | AGCTTTTTATCTGAAATAAT+TGG | - | chr8_2:22032114-22032133 | Msa1239910:intron | 20.0% |
| !!! | GCTTTTTATCTGAAATAATT+GGG | - | chr8_2:22032115-22032134 | Msa1239910:intron | 20.0% |
| !!! | AAATGAGAGATATTCTAAAA+AGG | - | chr8_2:22032371-22032390 | Msa1239910:intron | 20.0% |
| !! | CAATAAACATAAAGTAAGTT+TGG | + | chr8_2:22032513-22032532 | None:intergenic | 20.0% |
| !! | AAAGTAAACATTGAAGATTA+TGG | + | chr8_2:22032610-22032629 | None:intergenic | 20.0% |
| !!! | CATCTTTCCTTTATAAATTT+TGG | - | chr8_2:22032868-22032887 | Msa1239910:intron | 20.0% |
| !! | TAAATACAGTTTGTATAGAA+AGG | - | chr8_2:22032936-22032955 | Msa1239910:intron | 20.0% |
| !! | AAATACAGTTTGTATAGAAA+GGG | - | chr8_2:22032937-22032956 | Msa1239910:intron | 20.0% |
| !!! | CTTTGTTTTTGAAGAAAAAA+AGG | - | chr8_2:22033009-22033028 | Msa1239910:intron | 20.0% |
| !! | AAACCTTGTTAAAATATAGA+AGG | - | chr8_2:22033071-22033090 | Msa1239910:intron | 20.0% |
| !!! | TTTCCTTCTATATTTTAACA+AGG | + | chr8_2:22033077-22033096 | None:intergenic | 20.0% |
| !! | AAACAAAAAAATGTCAACTT+AGG | + | chr8_2:22033176-22033195 | None:intergenic | 20.0% |
| !! | TTAAAGCTAAATATACACAA+GGG | + | chr8_2:22033462-22033481 | None:intergenic | 20.0% |
| !! | ATTAAAGCTAAATATACACA+AGG | + | chr8_2:22033463-22033482 | None:intergenic | 20.0% |
| !!! | AAAATAAAACACATGGATTT+TGG | + | chr8_2:22033813-22033832 | None:intergenic | 20.0% |
| !! | ATTCCTTATTGATAAAACAT+TGG | - | chr8_2:22033994-22034013 | Msa1239910:intron | 20.0% |
| !!! | TTTCCAATGTTTTATCAATA+AGG | + | chr8_2:22034000-22034019 | None:intergenic | 20.0% |
| !! | TATTGATAAAACATTGGAAA+TGG | - | chr8_2:22034000-22034019 | Msa1239910:intron | 20.0% |
| !!! | AACAAATATATGAATTTTGC+TGG | - | chr8_2:22034475-22034494 | Msa1239910:intron | 20.0% |
| !!! | ACAAATATATGAATTTTGCT+GGG | - | chr8_2:22034476-22034495 | Msa1239910:intron | 20.0% |
| !!! | AAAGTAAAGTGTTAATACAT+AGG | + | chr8_2:22034753-22034772 | None:intergenic | 20.0% |
| !!! | TGTATTAACACTTTACTTTT+TGG | - | chr8_2:22034754-22034773 | Msa1239910:intron | 20.0% |
| ! | AAGTAAGATAAATATGCGAA+AGG | + | chr8_2:22030509-22030528 | None:intergenic | 25.0% |
| ! | GGCTTAAAGTAATTTATGTT+TGG | - | chr8_2:22030759-22030778 | Msa1239910:intron | 25.0% |
| ! | TTGGATACATCCATATAAAT+AGG | - | chr8_2:22030778-22030797 | Msa1239910:intron | 25.0% |
| ! | TGGATACATCCATATAAATA+GGG | - | chr8_2:22030779-22030798 | Msa1239910:intron | 25.0% |
| !! | AATTCCACAATCAATTTTAC+AGG | + | chr8_2:22030874-22030893 | None:intergenic | 25.0% |
| ! | CTACAATTTCTAACTTTGTT+TGG | - | chr8_2:22030900-22030919 | Msa1239910:intron | 25.0% |
| !! | CAAGTAAAATCAATTTTGGA+GGG | + | chr8_2:22031011-22031030 | None:intergenic | 25.0% |
| !! | TCAAGTAAAATCAATTTTGG+AGG | + | chr8_2:22031012-22031031 | None:intergenic | 25.0% |
| !! | GCTTCAAGTAAAATCAATTT+TGG | + | chr8_2:22031015-22031034 | None:intergenic | 25.0% |
| !! | ACTAAAAGTGATTTGTGTTT+GGG | + | chr8_2:22031117-22031136 | None:intergenic | 25.0% |
| !! | AACTAAAAGTGATTTGTGTT+TGG | + | chr8_2:22031118-22031137 | None:intergenic | 25.0% |
| !! | GTATTTTGTAGAATTGCTTT+TGG | + | chr8_2:22031155-22031174 | None:intergenic | 25.0% |
| ! | CAAAATCAATTATACATGTG+TGG | - | chr8_2:22031504-22031523 | Msa1239910:intron | 25.0% |
| ! | AAATGAAAATGTTTGGATGA+GGG | + | chr8_2:22031540-22031559 | None:intergenic | 25.0% |
| ! | AAAATGAAAATGTTTGGATG+AGG | + | chr8_2:22031541-22031560 | None:intergenic | 25.0% |
| ! | CACAGTTAATAACATACATA+AGG | + | chr8_2:22032086-22032105 | None:intergenic | 25.0% |
| !!! | GTGAGTTTTTCAAATTGTAA+GGG | - | chr8_2:22032137-22032156 | Msa1239910:intron | 25.0% |
| !!! | TTTCCTATTGAACCATTTTT+GGG | - | chr8_2:22032166-22032185 | Msa1239910:intron | 25.0% |
| !! | TTAATACAATTCTTTGCTGT+GGG | - | chr8_2:22032225-22032244 | Msa1239910:intron | 25.0% |
| ! | GATGAAATAATTGCTCTATT+TGG | - | chr8_2:22032247-22032266 | Msa1239910:intron | 25.0% |
| ! | AATAATTGCTCTATTTGGAT+TGG | - | chr8_2:22032252-22032271 | Msa1239910:intron | 25.0% |
| ! | ATAATTGCTCTATTTGGATT+GGG | - | chr8_2:22032253-22032272 | Msa1239910:intron | 25.0% |
| ! | AATACTTGTTTCAGAACTTA+TGG | - | chr8_2:22032308-22032327 | Msa1239910:intron | 25.0% |
| !! | ATGGTTCTTTCAATTTTCAA+TGG | - | chr8_2:22032554-22032573 | Msa1239910:CDS | 25.0% |
| !! | AATGTTTACTTTAGAGATGA+GGG | - | chr8_2:22032618-22032637 | Msa1239910:intron | 25.0% |
| ! | AAAAAAAAAAAACATGGAGC+TGG | + | chr8_2:22032767-22032786 | None:intergenic | 25.0% |
| ! | TAGCGATCCAAAATTTATAA+AGG | + | chr8_2:22032834-22032853 | None:intergenic | 25.0% |
| ! | AAAGTTCATCTAATTCATTC+AGG | - | chr8_2:22032969-22032988 | Msa1239910:intron | 25.0% |
| ! | AAGTTCATCTAATTCATTCA+GGG | - | chr8_2:22032970-22032989 | Msa1239910:intron | 25.0% |
| ! | AATATTACCTAAGCACTTAA+AGG | - | chr8_2:22033210-22033229 | Msa1239910:intron | 25.0% |
| ! | ATATTACCTAAGCACTTAAA+GGG | - | chr8_2:22033211-22033230 | Msa1239910:intron | 25.0% |
| !!! | TTTTAATTCATCACCCATTT+TGG | + | chr8_2:22033264-22033283 | None:intergenic | 25.0% |
| !!! | TCTATTTTAAGAGTGAAACT+AGG | - | chr8_2:22033638-22033657 | Msa1239910:intron | 25.0% |
| ! | TTGAAAAAATAAGTACGAGT+AGG | + | chr8_2:22033673-22033692 | None:intergenic | 25.0% |
| !!! | GTTTTTAAAAAAGAGAAGGT+GGG | + | chr8_2:22033919-22033938 | None:intergenic | 25.0% |
| !!! | TGTTTTTAAAAAAGAGAAGG+TGG | + | chr8_2:22033920-22033939 | None:intergenic | 25.0% |
| !! | AATTTGTCACAAAGATGTTT+TGG | - | chr8_2:22034029-22034048 | Msa1239910:intron | 25.0% |
| ! | TCAGATGAATAGATAAGAAA+AGG | - | chr8_2:22034085-22034104 | Msa1239910:intron | 25.0% |
| ! | CAGATGAATAGATAAGAAAA+GGG | - | chr8_2:22034086-22034105 | Msa1239910:intron | 25.0% |
| ! | TACAACAAAACAAATGTCTT+GGG | + | chr8_2:22034282-22034301 | None:intergenic | 25.0% |
| !!! | ATTTGTTTTGTTGTACAAGT+AGG | - | chr8_2:22034287-22034306 | Msa1239910:intron | 25.0% |
| !! | ATTCAAATTTTGCCAAGAAT+GGG | + | chr8_2:22034339-22034358 | None:intergenic | 25.0% |
| !! | AATTCAAATTTTGCCAAGAA+TGG | + | chr8_2:22034340-22034359 | None:intergenic | 25.0% |
| ! | ATTGACACACAAAAAAAAGA+AGG | + | chr8_2:22034876-22034895 | None:intergenic | 25.0% |
| !! | AATTTTCCTTCTTAAGAATC+TGG | - | chr8_2:22034893-22034912 | Msa1239910:five_prime_UTR | 25.0% |
| AATACTACTGTCTACTTACA+CGG | + | chr8_2:22030360-22030379 | None:intergenic | 30.0% | |
| !!! | ACAGTAGTATTGCGTTTTTT+AGG | - | chr8_2:22030369-22030388 | Msa1239910:three_prime_UTR | 30.0% |
| !!! | ATTTTATTTTTCAGTCTGGG+AGG | - | chr8_2:22030592-22030611 | Msa1239910:three_prime_UTR | 30.0% |
| TAAAAAAGAGAAAGGTGAGT+TGG | + | chr8_2:22030699-22030718 | None:intergenic | 30.0% | |
| TACATCCATATAAATAGGGT+TGG | - | chr8_2:22030783-22030802 | Msa1239910:intron | 30.0% | |
| TTTGTCCAACCCTATTTATA+TGG | + | chr8_2:22030791-22030810 | None:intergenic | 30.0% | |
| TGATCCTGTAAAATTGATTG+TGG | - | chr8_2:22030867-22030886 | Msa1239910:intron | 30.0% | |
| ! | CTAAAAGTGATTTGTGTTTG+GGG | + | chr8_2:22031116-22031135 | None:intergenic | 30.0% |
| !!! | AAGCTACAATTTGTTGCTTT+TGG | + | chr8_2:22031365-22031384 | None:intergenic | 30.0% |
| !!! | TAGGTCAATATGTCTTGTTT+TGG | - | chr8_2:22031850-22031869 | Msa1239910:intron | 30.0% |
| !! | GGTGAGTTTTTCAAATTGTA+AGG | - | chr8_2:22032136-22032155 | Msa1239910:intron | 30.0% |
| ! | CTTTCCTATTGAACCATTTT+TGG | - | chr8_2:22032165-22032184 | Msa1239910:intron | 30.0% |
| !! | TTCCTATTGAACCATTTTTG+GGG | - | chr8_2:22032167-22032186 | Msa1239910:intron | 30.0% |
| CTTAATACAATTCTTTGCTG+TGG | - | chr8_2:22032224-22032243 | Msa1239910:intron | 30.0% | |
| ! | GAGATATTCTAAAAAGGTTG+AGG | - | chr8_2:22032377-22032396 | Msa1239910:intron | 30.0% |
| ! | ATATTCTAAAAAGGTTGAGG+TGG | - | chr8_2:22032380-22032399 | Msa1239910:intron | 30.0% |
| !! | TTTTCAATGGATTCTTGTCT+TGG | - | chr8_2:22032567-22032586 | Msa1239910:CDS | 30.0% |
| ! | CAATGTTTACTTTAGAGATG+AGG | - | chr8_2:22032617-22032636 | Msa1239910:intron | 30.0% |
| ! | ATGTTTACTTTAGAGATGAG+GGG | - | chr8_2:22032619-22032638 | Msa1239910:intron | 30.0% |
| ! | ATTTGTTGAATTGTAGTGAC+AGG | - | chr8_2:22032657-22032676 | Msa1239910:intron | 30.0% |
| ATAAAGGAAAGATGAAGTCA+TGG | + | chr8_2:22032862-22032881 | None:intergenic | 30.0% | |
| TTATAGGAAAGATGAAGTCA+TGG | + | chr8_2:22032906-22032925 | None:intergenic | 30.0% | |
| AGTTAAAGCAGTATCAATGT+GGG | + | chr8_2:22033323-22033342 | None:intergenic | 30.0% | |
| ACAACCTTGTAAAATCATCT+CGG | - | chr8_2:22033607-22033626 | Msa1239910:intron | 30.0% | |
| ! | CTATATAGTTACTTTGCAGA+GGG | + | chr8_2:22033722-22033741 | None:intergenic | 30.0% |
| ! | ACTATATAGTTACTTTGCAG+AGG | + | chr8_2:22033723-22033742 | None:intergenic | 30.0% |
| CAGCACAAAAATAAAACACA+TGG | + | chr8_2:22033820-22033839 | None:intergenic | 30.0% | |
| AAGGGAAAACACTTACTAAT+TGG | - | chr8_2:22034104-22034123 | Msa1239910:intron | 30.0% | |
| GTTTGCTTGCAAATCTTTAT+TGG | - | chr8_2:22034145-22034164 | Msa1239910:intron | 30.0% | |
| ATGATCAGTACTAGGAAAAA+GGG | - | chr8_2:22034227-22034246 | Msa1239910:intron | 30.0% | |
| GTACAACAAAACAAATGTCT+TGG | + | chr8_2:22034283-22034302 | None:intergenic | 30.0% | |
| ! | TTCAAATTTTGCCAAGAATG+GGG | + | chr8_2:22034338-22034357 | None:intergenic | 30.0% |
| TTTGGGCATATTATTACTGT+TGG | - | chr8_2:22034513-22034532 | Msa1239910:intron | 30.0% | |
| TTATACACACATTTACACCT+AGG | + | chr8_2:22034651-22034670 | None:intergenic | 30.0% | |
| ACACACAAAAAAAAGAAGGA+AGG | + | chr8_2:22034872-22034891 | None:intergenic | 30.0% | |
| ATACTACTGTCTACTTACAC+GGG | + | chr8_2:22030359-22030378 | None:intergenic | 35.0% | |
| GACTTGCAAAACTTCAAACA+TGG | - | chr8_2:22030457-22030476 | Msa1239910:three_prime_UTR | 35.0% | |
| ! | TGCGAAAGGTGATGAAATTT+TGG | + | chr8_2:22030495-22030514 | None:intergenic | 35.0% |
| TACACCTCGAAAATCAATTC+TGG | + | chr8_2:22030943-22030962 | None:intergenic | 35.0% | |
| AATTCTTGTAGAAGCTGAAC+TGG | + | chr8_2:22031209-22031228 | None:intergenic | 35.0% | |
| AGAGTCAAAAGTGATTCTAG+AGG | + | chr8_2:22031462-22031481 | None:intergenic | 35.0% | |
| !! | AGAATCACTTTTGACTCTCT+AGG | - | chr8_2:22031464-22031483 | Msa1239910:intron | 35.0% |
| TACCCCAAAAATGGTTCAAT+AGG | + | chr8_2:22032172-22032191 | None:intergenic | 35.0% | |
| !!! | AACCATTTTTGGGGTATTCT+TGG | - | chr8_2:22032176-22032195 | Msa1239910:intron | 35.0% |
| ! | TAGTGACAGGTACTCTAAAA+GGG | - | chr8_2:22032670-22032689 | Msa1239910:intron | 35.0% |
| !! | GAAGCTGTTGAGTTTTTAAG+AGG | - | chr8_2:22032723-22032742 | Msa1239910:intron | 35.0% |
| GAAAAATGATTCTGCACACA+AGG | - | chr8_2:22033130-22033149 | Msa1239910:intron | 35.0% | |
| GTGCTTAGGTAATATTGTGA+AGG | + | chr8_2:22033206-22033225 | None:intergenic | 35.0% | |
| AAAAGTCCCTTTAAGTGCTT+AGG | + | chr8_2:22033220-22033239 | None:intergenic | 35.0% | |
| GAGTTAAAGCAGTATCAATG+TGG | + | chr8_2:22033324-22033343 | None:intergenic | 35.0% | |
| GAAAGTTCAGTCATGCAATA+TGG | - | chr8_2:22033417-22033436 | Msa1239910:intron | 35.0% | |
| CTCAATACACTTGACATGAA+AGG | + | chr8_2:22033531-22033550 | None:intergenic | 35.0% | |
| ! | TTTGCCGAGATGATTTTACA+AGG | + | chr8_2:22033614-22033633 | None:intergenic | 35.0% |
| ! | TGTAGTTTTCAGTGGATCAT+CGG | + | chr8_2:22033849-22033868 | None:intergenic | 35.0% |
| TACAATTAAGCCAAGACTTC+TGG | + | chr8_2:22033879-22033898 | None:intergenic | 35.0% | |
| CACTTACTAATTGGAACTGA+TGG | - | chr8_2:22034113-22034132 | Msa1239910:intron | 35.0% | |
| GATGATCAGTACTAGGAAAA+AGG | - | chr8_2:22034226-22034245 | Msa1239910:intron | 35.0% | |
| ATACCTTCTATGTTGCTAAC+CGG | - | chr8_2:22034672-22034691 | Msa1239910:intron | 35.0% | |
| AAGTAGATCACAATGATGGT+TGG | + | chr8_2:22034716-22034735 | None:intergenic | 35.0% | |
| AACCATCATTGTGATCTACT+TGG | - | chr8_2:22034715-22034734 | Msa1239910:intron | 35.0% | |
| TACCAAGTAGATCACAATGA+TGG | + | chr8_2:22034720-22034739 | None:intergenic | 35.0% | |
| ACTTGTCCAGATTCTTAAGA+AGG | + | chr8_2:22034902-22034921 | None:intergenic | 35.0% | |
| CACGGTTCACTGTTTGAAAA+TGG | + | chr8_2:22030432-22030451 | None:intergenic | 40.0% | |
| ! | TTGTTTGGTTCCACTTCTAG+AGG | - | chr8_2:22030915-22030934 | Msa1239910:intron | 40.0% |
| ! | TGTTTGGTTCCACTTCTAGA+GGG | - | chr8_2:22030916-22030935 | Msa1239910:intron | 40.0% |
| ACATGTGTCTTTGCAGTGTT+TGG | - | chr8_2:22031572-22031591 | Msa1239910:intron | 40.0% | |
| TGTTTGGTATCTGTGTCTGT+CGG | - | chr8_2:22031588-22031607 | Msa1239910:intron | 40.0% | |
| CACCAAGAATACCCCAAAAA+TGG | + | chr8_2:22032181-22032200 | None:intergenic | 40.0% | |
| ! | CTCTATTTGGATTGGGTTCT+AGG | - | chr8_2:22032260-22032279 | Msa1239910:intron | 40.0% |
| !!! | TTGGATTGGGTTCTAGGTTT+TGG | - | chr8_2:22032266-22032285 | Msa1239910:intron | 40.0% |
| !!! | TGGATTGGGTTCTAGGTTTT+GGG | - | chr8_2:22032267-22032286 | Msa1239910:intron | 40.0% |
| TATCCTTAAGCGTTTGTTCG+CGG | - | chr8_2:22032335-22032354 | Msa1239910:intron | 40.0% | |
| TCTCCTTTGTGTTCATGCTA+TGG | - | chr8_2:22032535-22032554 | Msa1239910:intron | 40.0% | |
| GAACCATAGCATGAACACAA+AGG | + | chr8_2:22032541-22032560 | None:intergenic | 40.0% | |
| ! | TCAATGGATTCTTGTCTTGG+AGG | - | chr8_2:22032570-22032589 | Msa1239910:CDS | 40.0% |
| GTAGTGACAGGTACTCTAAA+AGG | - | chr8_2:22032669-22032688 | Msa1239910:intron | 40.0% | |
| AAAACTCAACAGCTTCATCC+AGG | + | chr8_2:22032719-22032738 | None:intergenic | 40.0% | |
| CATTCAGGGCATATGATTGT+TGG | - | chr8_2:22032984-22033003 | Msa1239910:intron | 40.0% | |
| TGGCTTTCGCTATCACAATT+TGG | + | chr8_2:22033244-22033263 | None:intergenic | 40.0% | |
| ! | TGTGATAGCGAAAGCCAAAA+TGG | - | chr8_2:22033247-22033266 | Msa1239910:intron | 40.0% |
| ! | GTGATAGCGAAAGCCAAAAT+GGG | - | chr8_2:22033248-22033267 | Msa1239910:intron | 40.0% |
| ! | GTAGTTTTCAGTGGATCATC+GGG | + | chr8_2:22033848-22033867 | None:intergenic | 40.0% |
| ! | GTCTGATCTGTAGTTTTCAG+TGG | + | chr8_2:22033857-22033876 | None:intergenic | 40.0% |
| !! | TCCTAGTACTGATCATCATG+TGG | + | chr8_2:22034223-22034242 | None:intergenic | 40.0% |
| !!! | CTAGTTTTACTCCCCATTCT+TGG | - | chr8_2:22034324-22034343 | Msa1239910:intron | 40.0% |
| TACCTTCTATGTTGCTAACC+GGG | - | chr8_2:22034673-22034692 | Msa1239910:intron | 40.0% | |
| GTAACTAAAATGACGAGACC+CGG | + | chr8_2:22034694-22034713 | None:intergenic | 40.0% | |
| TATAATGCGAGTTCAGATGC+TGG | - | chr8_2:22034821-22034840 | Msa1239910:five_prime_UTR | 40.0% | |
| ATAATGCGAGTTCAGATGCT+GGG | - | chr8_2:22034822-22034841 | Msa1239910:five_prime_UTR | 40.0% | |
| ! | AGTTTTGCAAGTCTCGCTCA+CGG | + | chr8_2:22030450-22030469 | None:intergenic | 45.0% |
| TGGGAGGAAAGAAACTGTTC+TGG | - | chr8_2:22030608-22030627 | Msa1239910:three_prime_UTR | 45.0% | |
| GGTGTTCAAGTCAAGCTTAC+TGG | - | chr8_2:22030654-22030673 | Msa1239910:CDS | 45.0% | |
| GTTCAAGTCAAGCTTACTGG+TGG | - | chr8_2:22030657-22030676 | Msa1239910:CDS | 45.0% | |
| ! | AATTCTGGACCCTCTAGAAG+TGG | + | chr8_2:22030928-22030947 | None:intergenic | 45.0% |
| !! | GGGTCCAGAATTGATTTTCG+AGG | - | chr8_2:22030936-22030955 | Msa1239910:intron | 45.0% |
| AAGCTGAACTGGTTGTGCAT+GGG | + | chr8_2:22031198-22031217 | None:intergenic | 45.0% | |
| !!! | GGATTGGGTTCTAGGTTTTG+GGG | - | chr8_2:22032268-22032287 | Msa1239910:intron | 45.0% |
| !!! | GATTGGGTTCTAGGTTTTGG+GGG | - | chr8_2:22032269-22032288 | Msa1239910:intron | 45.0% |
| TAACCGCGAACAAACGCTTA+AGG | + | chr8_2:22032341-22032360 | None:intergenic | 45.0% | |
| TAAGCGTTTGTTCGCGGTTA+TGG | - | chr8_2:22032341-22032360 | Msa1239910:intron | 45.0% | |
| CCAGGACAAGGTTAAGTAAC+TGG | + | chr8_2:22032701-22032720 | None:intergenic | 45.0% | |
| CCAGTTACTTAACCTTGTCC+TGG | - | chr8_2:22032698-22032717 | Msa1239910:intron | 45.0% | |
| GCATGACTGAACTTTCAAGC+AGG | + | chr8_2:22033413-22033432 | None:intergenic | 45.0% | |
| ACAGATCAGACCAGAAGTCT+TGG | - | chr8_2:22033866-22033885 | Msa1239910:intron | 45.0% | |
| GCCACATGATGATCAGTACT+AGG | - | chr8_2:22034219-22034238 | Msa1239910:intron | 45.0% | |
| TCAGTACTAGGAAAAAGGGC+AGG | - | chr8_2:22034231-22034250 | Msa1239910:intron | 45.0% | |
| ! | TTTTGCTGGGATGACAAAGC+AGG | - | chr8_2:22034489-22034508 | Msa1239910:intron | 45.0% |
| ! | TGGGATGACAAAGCAGGTTT+TGG | - | chr8_2:22034495-22034514 | Msa1239910:intron | 45.0% |
| ! | GGGATGACAAAGCAGGTTTT+GGG | - | chr8_2:22034496-22034515 | Msa1239910:intron | 45.0% |
| !! | AACTGCTTTTGTCGCAATGC+AGG | - | chr8_2:22034541-22034560 | Msa1239910:intron | 45.0% |
| !!! | ATTTTGAAATTTATAAATTT+TGG | - | chr8_2:22032824-22032843 | Msa1239910:intron | 5.0% |
| !!! | AATTTTTTAAGAAAATTAAA+AGG | + | chr8_2:22033036-22033055 | None:intergenic | 5.0% |
| !!! | TTTTTTAAAAACATAATTTA+TGG | - | chr8_2:22033927-22033946 | Msa1239910:intron | 5.0% |
| AAGCTTACTGGTGGCAGACA+AGG | - | chr8_2:22030666-22030685 | Msa1239910:CDS | 50.0% | |
| AGCTGAACTGGTTGTGCATG+GGG | + | chr8_2:22031197-22031216 | None:intergenic | 50.0% | |
| GAAGCTGAACTGGTTGTGCA+TGG | + | chr8_2:22031199-22031218 | None:intergenic | 50.0% | |
| ! | GGGGTATTCTTGGTGAGCAT+TGG | - | chr8_2:22032186-22032205 | Msa1239910:intron | 50.0% |
| CAACAGCTTCATCCAGGACA+AGG | + | chr8_2:22032713-22032732 | None:intergenic | 50.0% | |
| TTGTCGCAATGCAGGTTTGC+AGG | - | chr8_2:22034549-22034568 | Msa1239910:intron | 50.0% | |
| TGTCGCAATGCAGGTTTGCA+GGG | - | chr8_2:22034550-22034569 | Msa1239910:intron | 50.0% | |
| ATGCTTGTGTCGCCAACTGA+TGG | - | chr8_2:22034584-22034603 | Msa1239910:intron | 50.0% | |
| TGTGTCGCCAACTGATGGTA+CGG | - | chr8_2:22034589-22034608 | Msa1239910:intron | 50.0% | |
| ATCTCGTCCGTACCATCAGT+TGG | + | chr8_2:22034599-22034618 | None:intergenic | 50.0% | |
| GATTGCGAACCCCTTTCTTG+AGG | - | chr8_2:22034616-22034635 | Msa1239910:CDS | 50.0% | |
| AACCCCTTTCTTGAGGCAGA+TGG | - | chr8_2:22034623-22034642 | Msa1239910:CDS | 50.0% | |
| ACCCCTTTCTTGAGGCAGAT+GGG | - | chr8_2:22034624-22034643 | Msa1239910:CDS | 50.0% | |
| GACCCGGTTAGCAACATAGA+AGG | + | chr8_2:22034678-22034697 | None:intergenic | 50.0% | |
| GTCGCAATGCAGGTTTGCAG+GGG | - | chr8_2:22034551-22034570 | Msa1239910:intron | 55.0% | |
| CCCCATCTGCCTCAAGAAAG+GGG | + | chr8_2:22034628-22034647 | None:intergenic | 55.0% | |
| CCCCTTTCTTGAGGCAGATG+GGG | - | chr8_2:22034625-22034644 | Msa1239910:CDS | 55.0% | |
| GCCCCATCTGCCTCAAGAAA+GGG | + | chr8_2:22034629-22034648 | None:intergenic | 55.0% | |
| GGCCCCATCTGCCTCAAGAA+AGG | + | chr8_2:22034630-22034649 | None:intergenic | 60.0% | |
| TCTTGAGGCAGATGGGGCCT+AGG | - | chr8_2:22034631-22034650 | Msa1239910:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 22030356 | 22034924 | 22030356 | ID=Msa1239910;Name=Msa1239910 |
| chr8_2 | mRNA | 22030356 | 22034924 | 22030356 | ID=Msa1239910-mRNA-1;Parent=Msa1239910;Name=Msa1239910-mRNA-1;_AED=0.02;_eAED=0.02;_QI=120|1|1|1|1|1|5|272|99 |
| chr8_2 | exon | 22030356 | 22030717 | 22030356 | ID=Msa1239910-mRNA-1:exon:7868;Parent=Msa1239910-mRNA-1 |
| chr8_2 | exon | 22031385 | 22031437 | 22031385 | ID=Msa1239910-mRNA-1:exon:7867;Parent=Msa1239910-mRNA-1 |
| chr8_2 | exon | 22032536 | 22032607 | 22032536 | ID=Msa1239910-mRNA-1:exon:7866;Parent=Msa1239910-mRNA-1 |
| chr8_2 | exon | 22034593 | 22034674 | 22034593 | ID=Msa1239910-mRNA-1:exon:7865;Parent=Msa1239910-mRNA-1 |
| chr8_2 | exon | 22034802 | 22034924 | 22034802 | ID=Msa1239910-mRNA-1:exon:7864;Parent=Msa1239910-mRNA-1 |
| chr8_2 | five_prime_UTR | 22034805 | 22034924 | 22034805 | ID=Msa1239910-mRNA-1:five_prime_utr;Parent=Msa1239910-mRNA-1 |
| chr8_2 | CDS | 22034802 | 22034804 | 22034802 | ID=Msa1239910-mRNA-1:cds;Parent=Msa1239910-mRNA-1 |
| chr8_2 | CDS | 22034593 | 22034674 | 22034593 | ID=Msa1239910-mRNA-1:cds;Parent=Msa1239910-mRNA-1 |
| chr8_2 | CDS | 22032536 | 22032607 | 22032536 | ID=Msa1239910-mRNA-1:cds;Parent=Msa1239910-mRNA-1 |
| chr8_2 | CDS | 22031385 | 22031437 | 22031385 | ID=Msa1239910-mRNA-1:cds;Parent=Msa1239910-mRNA-1 |
| chr8_2 | CDS | 22030628 | 22030717 | 22030628 | ID=Msa1239910-mRNA-1:cds;Parent=Msa1239910-mRNA-1 |
| chr8_2 | three_prime_UTR | 22030356 | 22030627 | 22030356 | ID=Msa1239910-mRNA-1:three_prime_utr;Parent=Msa1239910-mRNA-1 |
| Gene Sequence |
| Protein sequence |
