Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0520710 | RHN70535.1 | 97.912 | 431 | 9 | 0 | 1 | 431 | 1 | 431 | 0.0 | 871 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0520710 | sp|A0MFS5|WTF1_ARATH | 36.504 | 389 | 208 | 9 | 17 | 386 | 56 | 424 | 2.00e-58 | 202 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0520710 | A0A396J2B4 | 97.912 | 431 | 9 | 0 | 1 | 431 | 1 | 431 | 0.0 | 871 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0041720 | Msa0520710 | 0.824945 | 6.130350e-54 | -8.615850e-47 |
| Msa0056450 | Msa0520710 | 0.807667 | 4.519244e-50 | -8.615850e-47 |
| Msa0057370 | Msa0520710 | 0.804448 | 2.149924e-49 | -8.615850e-47 |
| Msa0104700 | Msa0520710 | 0.830350 | 3.086044e-55 | -8.615850e-47 |
| Msa0108390 | Msa0520710 | 0.809792 | 1.588368e-50 | -8.615850e-47 |
| Msa0116770 | Msa0520710 | 0.802502 | 5.442174e-49 | -8.615850e-47 |
| Msa0150990 | Msa0520710 | 0.800497 | 1.401874e-48 | -8.615850e-47 |
| Msa0160670 | Msa0520710 | 0.800956 | 1.130016e-48 | -8.615850e-47 |
| Msa0187030 | Msa0520710 | 0.815818 | 7.606466e-52 | -8.615850e-47 |
| Msa0204840 | Msa0520710 | 0.800171 | 1.633505e-48 | -8.615850e-47 |
| Msa0212990 | Msa0520710 | 0.807500 | 4.904859e-50 | -8.615850e-47 |
| Msa0225220 | Msa0520710 | 0.819816 | 9.522250e-53 | -8.615850e-47 |
| Msa0230150 | Msa0520710 | 0.801212 | 1.001609e-48 | -8.615850e-47 |
| Msa0367870 | Msa0520710 | 0.805453 | 1.324988e-49 | -8.615850e-47 |
| Msa0381610 | Msa0520710 | -0.826123 | 3.223754e-54 | -8.615850e-47 |
| Msa0382260 | Msa0520710 | 0.831258 | 1.848870e-55 | -8.615850e-47 |
| Msa0382270 | Msa0520710 | 0.996872 | 1.943526e-233 | -8.615850e-47 |
| Msa0390770 | Msa0520710 | 0.802151 | 6.426870e-49 | -8.615850e-47 |
| Msa0403660 | Msa0520710 | 0.805113 | 1.561483e-49 | -8.615850e-47 |
| Msa0406770 | Msa0520710 | 0.806522 | 7.896137e-50 | -8.615850e-47 |
| Msa0410650 | Msa0520710 | 0.800369 | 1.488943e-48 | -8.615850e-47 |
| Msa0423040 | Msa0520710 | 0.808157 | 3.555138e-50 | -8.615850e-47 |
| Msa0431780 | Msa0520710 | 0.874383 | 7.049921e-68 | -8.615850e-47 |
| Msa0432770 | Msa0520710 | 0.814713 | 1.338817e-51 | -8.615850e-47 |
| Msa0455760 | Msa0520710 | 0.805455 | 1.323673e-49 | -8.615850e-47 |
| Msa0479200 | Msa0520710 | 0.803350 | 3.636048e-49 | -8.615850e-47 |
| Msa0480000 | Msa0520710 | 0.839952 | 1.164720e-57 | -8.615850e-47 |
| Msa0253290 | Msa0520710 | 0.816273 | 6.020785e-52 | -8.615850e-47 |
| Msa0292120 | Msa0520710 | 0.803770 | 2.974343e-49 | -8.615850e-47 |
| Msa0308460 | Msa0520710 | 0.812178 | 4.830392e-51 | -8.615850e-47 |
| Msa0326520 | Msa0520710 | 0.815568 | 8.647134e-52 | -8.615850e-47 |
| Msa0330340 | Msa0520710 | 0.809699 | 1.663376e-50 | -8.615850e-47 |
| Msa0340450 | Msa0520710 | 0.806503 | 7.968657e-50 | -8.615850e-47 |
| Msa0342010 | Msa0520710 | 0.826481 | 2.649746e-54 | -8.615850e-47 |
| Msa0358890 | Msa0520710 | 0.806059 | 9.887049e-50 | -8.615850e-47 |
| Msa0360210 | Msa0520710 | 0.808293 | 3.325608e-50 | -8.615850e-47 |
| Msa0495330 | Msa0520710 | 0.811578 | 6.528885e-51 | -8.615850e-47 |
| Msa0520710 | Msa0544660 | 0.803949 | 2.730831e-49 | -8.615850e-47 |
| Msa0520710 | Msa0559500 | 0.803403 | 3.543955e-49 | -8.615850e-47 |
| Msa0520710 | Msa0597000 | 0.805679 | 1.188382e-49 | -8.615850e-47 |
| Msa0520710 | Msa0615010 | 0.811907 | 5.536370e-51 | -8.615850e-47 |
| Msa0520710 | Msa0620620 | 0.805311 | 1.419503e-49 | -8.615850e-47 |
| Msa0520710 | Msa0648240 | -0.801230 | 9.931731e-49 | -8.615850e-47 |
| Msa0520710 | Msa0693380 | 0.811222 | 7.798249e-51 | -8.615850e-47 |
| Msa0520710 | Msa0723990 | 0.826750 | 2.285110e-54 | -8.615850e-47 |
| Msa0520710 | Msa0751260 | 0.829152 | 6.040528e-55 | -8.615850e-47 |
| Msa0520710 | Msa0764570 | 0.817876 | 2.626438e-52 | -8.615850e-47 |
| Msa0520710 | Msa0770360 | 0.811532 | 6.678191e-51 | -8.615850e-47 |
| Msa0520710 | Msa0795070 | 0.818100 | 2.337257e-52 | -8.615850e-47 |
| Msa0520710 | Msa0797770 | 0.802575 | 5.256685e-49 | -8.615850e-47 |
| Msa0520710 | Msa0800700 | 0.800639 | 1.311280e-48 | -8.615850e-47 |
| Msa0520710 | Msa0826760 | 0.808593 | 2.870211e-50 | -8.615850e-47 |
| Msa0520710 | Msa0868160 | 0.801222 | 9.967157e-49 | -8.615850e-47 |
| Msa0520710 | Msa0868440 | 0.800498 | 1.401046e-48 | -8.615850e-47 |
| Msa0520710 | Msa0900620 | 0.814804 | 1.278137e-51 | -8.615850e-47 |
| Msa0520710 | Msa0936390 | 0.820189 | 7.824200e-53 | -8.615850e-47 |
| Msa0520710 | Msa0975220 | 0.800426 | 1.449605e-48 | -8.615850e-47 |
| Msa0520710 | Msa1034500 | 0.810845 | 9.414340e-51 | -8.615850e-47 |
| Msa0520710 | Msa1038080 | 0.822073 | 2.879303e-53 | -8.615850e-47 |
| Msa0520710 | Msa1082500 | 0.810422 | 1.162115e-50 | -8.615850e-47 |
| Msa0520710 | Msa1104090 | 0.807570 | 4.737792e-50 | -8.615850e-47 |
| Msa0520710 | Msa1142670 | 0.800510 | 1.393355e-48 | -8.615850e-47 |
| Msa0520710 | Msa1163540 | 0.808612 | 2.843869e-50 | -8.615850e-47 |
| Msa0520710 | Msa1164590 | 0.803486 | 3.407122e-49 | -8.615850e-47 |
| Msa0520710 | Msa1344340 | 0.813458 | 2.533723e-51 | -8.615850e-47 |
| Msa0520710 | Msa1371430 | 0.801709 | 7.924120e-49 | -8.615850e-47 |
| Msa0520710 | Msa1410420 | 0.801941 | 7.100895e-49 | -8.615850e-47 |
| Msa0520710 | Msa1415640 | 0.827928 | 1.193231e-54 | -8.615850e-47 |
| Msa0520710 | Msa1418240 | 0.804162 | 2.465866e-49 | -8.615850e-47 |
| Msa0520710 | Msa1423880 | 0.802915 | 4.472184e-49 | -8.615850e-47 |
| Msa0520710 | Msa1435070 | 0.981727 | 2.685480e-153 | -8.615850e-47 |
| Msa0520710 | Msa1435080 | 0.820435 | 6.869103e-53 | -8.615850e-47 |
| Msa0520710 | Msa1439700 | 0.979659 | 1.867757e-148 | -8.615850e-47 |
| Msa0520710 | Msa1439710 | 0.852803 | 3.633299e-61 | -8.615850e-47 |
| Msa0520710 | Msa1443060 | 0.806313 | 8.739713e-50 | -8.615850e-47 |
| Msa0520710 | Msa1446780 | 0.812913 | 3.337708e-51 | -8.615850e-47 |
| Msa0520710 | Msa1454530 | 0.802370 | 5.793761e-49 | -8.615850e-47 |
| Msa0520710 | Msa1459180 | 0.818266 | 2.144497e-52 | -8.615850e-47 |
| Msa0520710 | Msa1466540 | 0.801701 | 7.951225e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0520710 | MtrunA17_Chr3g0136561 | 97.912 | 431 | 9 | 0 | 1 | 431 | 1 | 431 | 0.0 | 871 |
| Msa0520710 | MtrunA17_Chr6g0473071 | 97.680 | 431 | 10 | 0 | 1 | 431 | 8 | 438 | 0.0 | 863 |
| Msa0520710 | MtrunA17_Chr7g0275561 | 34.384 | 349 | 206 | 6 | 60 | 401 | 110 | 442 | 2.48e-50 | 178 |
| Msa0520710 | MtrunA17_Chr6g0462491 | 32.225 | 391 | 244 | 8 | 22 | 397 | 34 | 418 | 3.92e-49 | 173 |
| Msa0520710 | MtrunA17_Chr1g0185761 | 33.237 | 346 | 213 | 6 | 40 | 377 | 39 | 374 | 1.15e-45 | 162 |
| Msa0520710 | MtrunA17_Chr7g0255281 | 34.024 | 338 | 196 | 10 | 90 | 422 | 99 | 414 | 3.82e-45 | 162 |
| Msa0520710 | MtrunA17_Chr1g0161181 | 33.140 | 344 | 212 | 6 | 42 | 377 | 41 | 374 | 1.70e-44 | 159 |
| Msa0520710 | MtrunA17_Chr8g0381061 | 31.962 | 316 | 202 | 7 | 57 | 367 | 58 | 365 | 5.01e-41 | 150 |
| Msa0520710 | MtrunA17_Chr8g0358271 | 31.073 | 354 | 218 | 10 | 33 | 371 | 29 | 371 | 2.24e-39 | 145 |
| Msa0520710 | MtrunA17_Chr7g0268361 | 29.016 | 386 | 238 | 10 | 57 | 424 | 53 | 420 | 1.32e-38 | 144 |
| Msa0520710 | MtrunA17_Chr3g0088781 | 31.765 | 340 | 208 | 8 | 25 | 363 | 14 | 330 | 2.93e-38 | 143 |
| Msa0520710 | MtrunA17_Chr1g0153201 | 30.882 | 340 | 211 | 7 | 25 | 363 | 14 | 330 | 7.01e-38 | 142 |
| Msa0520710 | MtrunA17_Chr3g0115901 | 32.248 | 307 | 193 | 6 | 62 | 363 | 83 | 379 | 4.22e-36 | 137 |
| Msa0520710 | MtrunA17_Chr3g0088811 | 35.714 | 224 | 127 | 5 | 141 | 363 | 23 | 230 | 1.91e-33 | 127 |
| Msa0520710 | MtrunA17_Chr3g0121121 | 31.515 | 330 | 189 | 8 | 58 | 367 | 78 | 390 | 3.74e-33 | 130 |
| Msa0520710 | MtrunA17_Chr2g0311491 | 35.950 | 242 | 142 | 5 | 144 | 377 | 1 | 237 | 4.55e-32 | 124 |
| Msa0520710 | MtrunA17_Chr6g0467331 | 28.895 | 353 | 228 | 9 | 42 | 386 | 36 | 373 | 8.69e-31 | 125 |
| Msa0520710 | MtrunA17_Chr3g0109091 | 27.322 | 366 | 237 | 9 | 22 | 372 | 40 | 391 | 6.48e-30 | 120 |
| Msa0520710 | MtrunA17_Chr7g0220971 | 28.025 | 314 | 215 | 5 | 55 | 367 | 72 | 375 | 3.59e-28 | 115 |
| Msa0520710 | MtrunA17_Chr6g0462481 | 31.707 | 205 | 130 | 4 | 115 | 314 | 17 | 216 | 1.68e-22 | 95.1 |
| Msa0520710 | MtrunA17_Chr8g0389501 | 31.771 | 192 | 113 | 5 | 115 | 297 | 56 | 238 | 2.11e-15 | 75.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0520710 | AT5G21970.1 | 66.667 | 390 | 121 | 5 | 20 | 408 | 39 | 420 | 0.0 | 521 |
| Msa0520710 | AT5G21970.2 | 66.667 | 390 | 121 | 5 | 20 | 408 | 39 | 420 | 0.0 | 521 |
| Msa0520710 | AT4G01037.1 | 36.504 | 389 | 208 | 9 | 17 | 386 | 56 | 424 | 2.03e-59 | 202 |
| Msa0520710 | AT3G63090.1 | 31.443 | 388 | 245 | 8 | 22 | 402 | 29 | 402 | 2.78e-48 | 170 |
| Msa0520710 | AT4G33495.1 | 33.773 | 379 | 223 | 11 | 25 | 388 | 38 | 403 | 1.91e-47 | 168 |
| Msa0520710 | AT5G48040.1 | 32.295 | 353 | 209 | 8 | 41 | 379 | 44 | 380 | 6.67e-45 | 161 |
| Msa0520710 | AT1G79120.1 | 31.653 | 357 | 222 | 6 | 38 | 382 | 64 | 410 | 4.57e-44 | 159 |
| Msa0520710 | AT1G79120.2 | 31.653 | 357 | 222 | 6 | 38 | 382 | 64 | 410 | 4.57e-44 | 159 |
| Msa0520710 | AT2G31290.1 | 31.285 | 358 | 217 | 7 | 37 | 387 | 29 | 364 | 1.14e-42 | 155 |
| Msa0520710 | AT2G31290.2 | 31.285 | 358 | 217 | 7 | 37 | 387 | 29 | 364 | 1.14e-42 | 155 |
| Msa0520710 | AT5G45790.2 | 31.421 | 366 | 223 | 9 | 17 | 372 | 48 | 395 | 4.27e-41 | 151 |
| Msa0520710 | AT5G45790.1 | 36.082 | 291 | 162 | 7 | 90 | 372 | 36 | 310 | 1.09e-40 | 148 |
| Msa0520710 | AT4G08940.1 | 31.529 | 314 | 194 | 6 | 57 | 363 | 83 | 382 | 1.54e-40 | 149 |
| Msa0520710 | AT5G62990.1 | 35.152 | 330 | 176 | 9 | 58 | 367 | 81 | 392 | 2.39e-40 | 150 |
| Msa0520710 | AT3G58520.1 | 32.827 | 329 | 202 | 8 | 56 | 372 | 55 | 376 | 4.83e-40 | 148 |
| Msa0520710 | AT1G06440.1 | 29.211 | 380 | 240 | 8 | 5 | 367 | 3 | 370 | 1.92e-36 | 138 |
| Msa0520710 | AT3G58520.2 | 34.138 | 290 | 174 | 7 | 95 | 372 | 80 | 364 | 3.98e-36 | 137 |
| Msa0520710 | AT1G71850.1 | 27.157 | 394 | 268 | 7 | 22 | 410 | 17 | 396 | 2.36e-34 | 134 |
| Msa0520710 | AT4G24320.1 | 28.767 | 292 | 195 | 6 | 91 | 375 | 78 | 363 | 2.43e-23 | 101 |
| Msa0520710 | AT2G39120.1 | 27.707 | 314 | 216 | 6 | 55 | 367 | 52 | 355 | 2.97e-23 | 101 |
Find 77 sgRNAs with CRISPR-Local
Find 214 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGAACTGGAATAACCATTTC+TGG | 0.211698 | 3_4:-73237632 | None:intergenic |
| AAAAGGGTGCATAGTTATTA+TGG | 0.236478 | 3_4:+73238166 | Msa0520710:CDS |
| TCAGAGATTCTGTGAGGTTT+TGG | 0.253264 | 3_4:-73237689 | None:intergenic |
| CTTAGTCTTGTTGGCTATAG+AGG | 0.357273 | 3_4:+73238526 | Msa0520710:CDS |
| GATTCATAGCAATCGATTCA+TGG | 0.376006 | 3_4:+73237447 | Msa0520710:CDS |
| TTGTTTCTTGGAATTCTGAA+TGG | 0.380201 | 3_4:+73238029 | Msa0520710:CDS |
| ACAGGAAATTTCAAAGGAAA+TGG | 0.381695 | 3_4:-73238136 | None:intergenic |
| GGATGTGGAGCTTGAGCAAC+AGG | 0.382512 | 3_4:+73238642 | Msa0520710:CDS |
| AAAATTGCTGTTATTCGCAT+TGG | 0.392112 | 3_4:+73237474 | Msa0520710:CDS |
| TTCACAAATTCAATGCGGTT+TGG | 0.393479 | 3_4:+73237425 | None:intergenic |
| AGCTCTATAAGGATCGTAAC+GGG | 0.395197 | 3_4:+73237741 | Msa0520710:CDS |
| GAGAAGCTTCTTAGTCTTGT+TGG | 0.399437 | 3_4:+73238517 | Msa0520710:CDS |
| AACAGAAGCTTATGATGGTT+CGG | 0.405777 | 3_4:+73238459 | Msa0520710:CDS |
| AAACCCTTTGCATCAGCATA+AGG | 0.409922 | 3_4:-73238229 | None:intergenic |
| AAGATCGAAGCAAGAAGAAA+AGG | 0.422615 | 3_4:+73237528 | Msa0520710:CDS |
| AAATTGCTGTTATTCGCATT+GGG | 0.423537 | 3_4:+73237475 | Msa0520710:CDS |
| ACTCCCAACGGAAGTGAGTT+AGG | 0.429164 | 3_4:-73238345 | None:intergenic |
| AAGCAAACCCGGGGTGTGTT+CGG | 0.431409 | 3_4:-73238107 | None:intergenic |
| ATGTTTCTGAGAGGGGTAAG+AGG | 0.440704 | 3_4:+73238422 | Msa0520710:CDS |
| AGGATCGTAACGGGGTGTTA+TGG | 0.444477 | 3_4:+73237750 | Msa0520710:CDS |
| TCTCCTTATGCTGATGCAAA+GGG | 0.446830 | 3_4:+73238226 | Msa0520710:CDS |
| TCGAAGCAGCAACAGAGAAA+TGG | 0.448143 | 3_4:+73237561 | Msa0520710:CDS |
| GTTCTTTAGAATTCGATAAG+AGG | 0.449761 | 3_4:+73238260 | Msa0520710:CDS |
| TGATTCTGATGTGGAGGACT+TGG | 0.465301 | 3_4:+73238621 | Msa0520710:CDS |
| GATTCTGAGATGGATGTTAG+AGG | 0.467647 | 3_4:+73238700 | Msa0520710:CDS |
| TCTCGAACAAGAACCAGAAA+TGG | 0.467938 | 3_4:+73237619 | Msa0520710:CDS |
| TGTTTCTTGGAATTCTGAAT+GGG | 0.470467 | 3_4:+73238030 | Msa0520710:CDS |
| CTTCTTCTCAATCTCTGTGA+TGG | 0.477726 | 3_4:-73238053 | None:intergenic |
| TAATGTGAAAGAGATCGAAC+TGG | 0.482436 | 3_4:-73237647 | None:intergenic |
| AGATCGAAGCAAGAAGAAAA+GGG | 0.484434 | 3_4:+73237529 | Msa0520710:CDS |
| GTCTCCTTATGCTGATGCAA+AGG | 0.487202 | 3_4:+73238225 | Msa0520710:CDS |
| GAATAAGACGATTGTGGAAG+GGG | 0.488073 | 3_4:+73238075 | Msa0520710:CDS |
| GAAGAAGAATAAGACGATTG+TGG | 0.490121 | 3_4:+73238069 | Msa0520710:CDS |
| AATGGTAGCGAAAGCAAACC+CGG | 0.509498 | 3_4:-73238118 | None:intergenic |
| AGGAAGGAAGAAGAAGTTTG+AGG | 0.519477 | 3_4:+73238546 | Msa0520710:CDS |
| TCAGAATCGTCCTCGAGTAA+AGG | 0.523469 | 3_4:-73238685 | None:intergenic |
| AAGAATAAGACGATTGTGGA+AGG | 0.524672 | 3_4:+73238073 | Msa0520710:CDS |
| TTCTTTAGAATTCGATAAGA+GGG | 0.527132 | 3_4:+73238261 | Msa0520710:CDS |
| TACTAGGTTGCTTATGATGT+CGG | 0.530829 | 3_4:+73237859 | Msa0520710:CDS |
| GGTTGATAAACGTGTTCAGT+TGG | 0.531073 | 3_4:+73237880 | Msa0520710:CDS |
| GATGCAAAGGGTTTGAAACC+TGG | 0.532506 | 3_4:+73238238 | Msa0520710:CDS |
| AAGCTGCTGAATATGTTACT+AGG | 0.532919 | 3_4:+73237843 | Msa0520710:CDS |
| CAATGAGTTCTAAAATCCAT+TGG | 0.537215 | 3_4:-73237938 | None:intergenic |
| TCACCTAACTCACTTCCGTT+GGG | 0.539444 | 3_4:+73238342 | Msa0520710:CDS |
| AGTGATGAGGAAGGCGGTGA+TGG | 0.540545 | 3_4:+73238580 | Msa0520710:CDS |
| TTTGATGGAAGAACACAAAA+GGG | 0.543427 | 3_4:+73237799 | Msa0520710:CDS |
| ACAGGATACCTTGGAGTACA+AGG | 0.547237 | 3_4:+73238660 | Msa0520710:CDS |
| AACTGAAACCGAACACACCC+CGG | 0.548649 | 3_4:+73238099 | Msa0520710:CDS |
| ATCACCTAACTCACTTCCGT+TGG | 0.553764 | 3_4:+73238341 | Msa0520710:CDS |
| TTATCGAATTCTAAAGAACC+AGG | 0.555066 | 3_4:-73238256 | None:intergenic |
| ACTGAAACCGAACACACCCC+GGG | 0.560385 | 3_4:+73238100 | Msa0520710:CDS |
| GTCTTGTTGGCTATAGAGGA+AGG | 0.560921 | 3_4:+73238530 | Msa0520710:CDS |
| AAATTTACAGGAAATTTCAA+AGG | 0.561249 | 3_4:-73238142 | None:intergenic |
| GCTTGAGCAACAGGATACCT+TGG | 0.563372 | 3_4:+73238651 | Msa0520710:CDS |
| TGATGTGGAGGACTTGGATG+TGG | 0.571180 | 3_4:+73238627 | Msa0520710:CDS |
| ATTCTGAGATGGATGTTAGA+GGG | 0.571949 | 3_4:+73238701 | Msa0520710:CDS |
| AACTCAACATCGTCAAGAGA+AGG | 0.575314 | 3_4:-73237998 | None:intergenic |
| TTATGCCTCAGAAGTTGATG+AGG | 0.583152 | 3_4:+73238371 | Msa0520710:CDS |
| ACTCGAGGACGATTCTGAGA+TGG | 0.584295 | 3_4:+73238690 | Msa0520710:CDS |
| AGAATAAGACGATTGTGGAA+GGG | 0.588082 | 3_4:+73238074 | Msa0520710:CDS |
| GCTTCAGAGTGATTCTGATG+TGG | 0.588652 | 3_4:+73238612 | Msa0520710:CDS |
| CGTAACGGGGTGTTATGGTG+TGG | 0.588860 | 3_4:+73237755 | Msa0520710:CDS |
| GGCGGATAGTGATAGTGATG+AGG | 0.590246 | 3_4:+73238567 | Msa0520710:CDS |
| GAGCTCTATAAGGATCGTAA+CGG | 0.593963 | 3_4:+73237740 | Msa0520710:CDS |
| TAAAGGATCCTTGTACTCCA+AGG | 0.600584 | 3_4:-73238668 | None:intergenic |
| AAGGAAGAAGAAGTTTGAGG+CGG | 0.603463 | 3_4:+73238549 | Msa0520710:CDS |
| TCAGAGTGATTCTGATGTGG+AGG | 0.607726 | 3_4:+73238615 | Msa0520710:CDS |
| AAAAGCCTCATCAACTTCTG+AGG | 0.608858 | 3_4:-73238376 | None:intergenic |
| GTTATTCGCATTGGGAACGA+TGG | 0.640658 | 3_4:+73237483 | Msa0520710:CDS |
| AGTGATAGTGATGAGGAAGG+CGG | 0.642676 | 3_4:+73238574 | Msa0520710:CDS |
| GATAGTGATAGTGATGAGGA+AGG | 0.653348 | 3_4:+73238571 | Msa0520710:CDS |
| GAGGCATAACTAACTCCCAA+CGG | 0.662694 | 3_4:-73238357 | None:intergenic |
| ATGGTAGCGAAAGCAAACCC+GGG | 0.662877 | 3_4:-73238117 | None:intergenic |
| GTACAAGGATCCTTTACTCG+AGG | 0.671532 | 3_4:+73238675 | Msa0520710:CDS |
| GCTCTATAAGGATCGTAACG+GGG | 0.700866 | 3_4:+73237742 | Msa0520710:CDS |
| AGAAAATCAGAGATTCTGTG+AGG | 0.714200 | 3_4:-73237695 | None:intergenic |
| TGGTAGCGAAAGCAAACCCG+GGG | 0.722533 | 3_4:-73238116 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTCCTGTAAATTTTAAA+AGG | + | chr3_4:73238149-73238168 | Msa0520710:CDS | 15.0% |
| !!! | ATTTCCTGTAAATTTTAAAA+GGG | + | chr3_4:73238150-73238169 | Msa0520710:CDS | 15.0% |
| !!! | AATTTCCTGTAAATTTTAAA+AGG | + | chr3_4:73238149-73238168 | Msa0520710:CDS | 15.0% |
| !!! | ATTTCCTGTAAATTTTAAAA+GGG | + | chr3_4:73238150-73238169 | Msa0520710:CDS | 15.0% |
| !! | AAATTTACAGGAAATTTCAA+AGG | - | chr3_4:73238145-73238164 | None:intergenic | 20.0% |
| !! | TGAAAAGATAAAAATGTTTC+AGG | + | chr3_4:73238189-73238208 | Msa0520710:CDS | 20.0% |
| !!! | TATTTTTTATGTTTCTGAGA+GGG | + | chr3_4:73238414-73238433 | Msa0520710:CDS | 20.0% |
| !! | AAATTTACAGGAAATTTCAA+AGG | - | chr3_4:73238145-73238164 | None:intergenic | 20.0% |
| !! | TGAAAAGATAAAAATGTTTC+AGG | + | chr3_4:73238189-73238208 | Msa0520710:CDS | 20.0% |
| !!! | TATTTTTTATGTTTCTGAGA+GGG | + | chr3_4:73238414-73238433 | Msa0520710:CDS | 20.0% |
| ! | TATAGAGCTCAAAAAGTTTA+GGG | - | chr3_4:73237730-73237749 | None:intergenic | 25.0% |
| ! | TTATAGAGCTCAAAAAGTTT+AGG | - | chr3_4:73237731-73237750 | None:intergenic | 25.0% |
| !!! | TAAACTTTTTGAGCTCTATA+AGG | + | chr3_4:73237730-73237749 | Msa0520710:CDS | 25.0% |
| !!! | AATGGATTTTAGAACTCATT+GGG | + | chr3_4:73237940-73237959 | Msa0520710:CDS | 25.0% |
| !!! | TTCTTTAGAATTCGATAAGA+GGG | + | chr3_4:73238261-73238280 | Msa0520710:CDS | 25.0% |
| !!! | GTATTTTTTATGTTTCTGAG+AGG | + | chr3_4:73238413-73238432 | Msa0520710:CDS | 25.0% |
| !!! | ATTTTTTATGTTTCTGAGAG+GGG | + | chr3_4:73238415-73238434 | Msa0520710:CDS | 25.0% |
| !! | TTTTTAACAGAAGCTTATGA+TGG | + | chr3_4:73238454-73238473 | Msa0520710:CDS | 25.0% |
| !!! | AGAAATCTCCTTTGTTTTTA+TGG | + | chr3_4:73238491-73238510 | Msa0520710:CDS | 25.0% |
| ! | TATAGAGCTCAAAAAGTTTA+GGG | - | chr3_4:73237730-73237749 | None:intergenic | 25.0% |
| ! | TTATAGAGCTCAAAAAGTTT+AGG | - | chr3_4:73237731-73237750 | None:intergenic | 25.0% |
| !!! | TAAACTTTTTGAGCTCTATA+AGG | + | chr3_4:73237730-73237749 | Msa0520710:CDS | 25.0% |
| !!! | AATGGATTTTAGAACTCATT+GGG | + | chr3_4:73237940-73237959 | Msa0520710:CDS | 25.0% |
| !!! | TTCTTTAGAATTCGATAAGA+GGG | + | chr3_4:73238261-73238280 | Msa0520710:CDS | 25.0% |
| !!! | GTATTTTTTATGTTTCTGAG+AGG | + | chr3_4:73238413-73238432 | Msa0520710:CDS | 25.0% |
| !!! | ATTTTTTATGTTTCTGAGAG+GGG | + | chr3_4:73238415-73238434 | Msa0520710:CDS | 25.0% |
| !! | TTTTTAACAGAAGCTTATGA+TGG | + | chr3_4:73238454-73238473 | Msa0520710:CDS | 25.0% |
| !!! | AGAAATCTCCTTTGTTTTTA+TGG | + | chr3_4:73238491-73238510 | Msa0520710:CDS | 25.0% |
| ! | AAAATTGCTGTTATTCGCAT+TGG | + | chr3_4:73237474-73237493 | Msa0520710:CDS | 30.0% |
| ! | AAATTGCTGTTATTCGCATT+GGG | + | chr3_4:73237475-73237494 | Msa0520710:CDS | 30.0% |
| ATAGAGCTCAAAAAGTTTAG+GGG | - | chr3_4:73237729-73237748 | None:intergenic | 30.0% | |
| ! | TTTTGATGGAAGAACACAAA+AGG | + | chr3_4:73237798-73237817 | Msa0520710:CDS | 30.0% |
| TTTGATGGAAGAACACAAAA+GGG | + | chr3_4:73237799-73237818 | Msa0520710:CDS | 30.0% | |
| !! | CAATGAGTTCTAAAATCCAT+TGG | - | chr3_4:73237941-73237960 | None:intergenic | 30.0% |
| !!! | CAATGGATTTTAGAACTCAT+TGG | + | chr3_4:73237939-73237958 | Msa0520710:CDS | 30.0% |
| ! | TTGTTTCTTGGAATTCTGAA+TGG | + | chr3_4:73238029-73238048 | Msa0520710:CDS | 30.0% |
| TGTTTCTTGGAATTCTGAAT+GGG | + | chr3_4:73238030-73238049 | Msa0520710:CDS | 30.0% | |
| ACAGGAAATTTCAAAGGAAA+TGG | - | chr3_4:73238139-73238158 | None:intergenic | 30.0% | |
| !!! | TGCACCCTTTTAAAATTTAC+AGG | - | chr3_4:73238157-73238176 | None:intergenic | 30.0% |
| ! | AAAAGGGTGCATAGTTATTA+TGG | + | chr3_4:73238166-73238185 | Msa0520710:CDS | 30.0% |
| AGATAAAAATGTTTCAGGAG+AGG | + | chr3_4:73238194-73238213 | Msa0520710:CDS | 30.0% | |
| ! | TTATCGAATTCTAAAGAACC+AGG | - | chr3_4:73238259-73238278 | None:intergenic | 30.0% |
| !! | GTTCTTTAGAATTCGATAAG+AGG | + | chr3_4:73238260-73238279 | Msa0520710:CDS | 30.0% |
| !!! | TTAGTTTTACAGTTGAGAAG+AGG | + | chr3_4:73238308-73238327 | Msa0520710:CDS | 30.0% |
| !!! | AATCTCCTTTGTTTTTATGG+AGG | + | chr3_4:73238494-73238513 | Msa0520710:CDS | 30.0% |
| !!! | ATCTCCTTTGTTTTTATGGA+GGG | + | chr3_4:73238495-73238514 | Msa0520710:CDS | 30.0% |
| ! | AAAATTGCTGTTATTCGCAT+TGG | + | chr3_4:73237474-73237493 | Msa0520710:CDS | 30.0% |
| ! | AAATTGCTGTTATTCGCATT+GGG | + | chr3_4:73237475-73237494 | Msa0520710:CDS | 30.0% |
| ATAGAGCTCAAAAAGTTTAG+GGG | - | chr3_4:73237729-73237748 | None:intergenic | 30.0% | |
| ! | TTTTGATGGAAGAACACAAA+AGG | + | chr3_4:73237798-73237817 | Msa0520710:CDS | 30.0% |
| TTTGATGGAAGAACACAAAA+GGG | + | chr3_4:73237799-73237818 | Msa0520710:CDS | 30.0% | |
| !! | CAATGAGTTCTAAAATCCAT+TGG | - | chr3_4:73237941-73237960 | None:intergenic | 30.0% |
| !!! | CAATGGATTTTAGAACTCAT+TGG | + | chr3_4:73237939-73237958 | Msa0520710:CDS | 30.0% |
| ! | TTGTTTCTTGGAATTCTGAA+TGG | + | chr3_4:73238029-73238048 | Msa0520710:CDS | 30.0% |
| TGTTTCTTGGAATTCTGAAT+GGG | + | chr3_4:73238030-73238049 | Msa0520710:CDS | 30.0% | |
| ACAGGAAATTTCAAAGGAAA+TGG | - | chr3_4:73238139-73238158 | None:intergenic | 30.0% | |
| !!! | TGCACCCTTTTAAAATTTAC+AGG | - | chr3_4:73238157-73238176 | None:intergenic | 30.0% |
| ! | AAAAGGGTGCATAGTTATTA+TGG | + | chr3_4:73238166-73238185 | Msa0520710:CDS | 30.0% |
| AGATAAAAATGTTTCAGGAG+AGG | + | chr3_4:73238194-73238213 | Msa0520710:CDS | 30.0% | |
| ! | TTATCGAATTCTAAAGAACC+AGG | - | chr3_4:73238259-73238278 | None:intergenic | 30.0% |
| !! | GTTCTTTAGAATTCGATAAG+AGG | + | chr3_4:73238260-73238279 | Msa0520710:CDS | 30.0% |
| !!! | TTAGTTTTACAGTTGAGAAG+AGG | + | chr3_4:73238308-73238327 | Msa0520710:CDS | 30.0% |
| !!! | AATCTCCTTTGTTTTTATGG+AGG | + | chr3_4:73238494-73238513 | Msa0520710:CDS | 30.0% |
| !!! | ATCTCCTTTGTTTTTATGGA+GGG | + | chr3_4:73238495-73238514 | Msa0520710:CDS | 30.0% |
| ! | GATTCATAGCAATCGATTCA+TGG | + | chr3_4:73237447-73237466 | Msa0520710:CDS | 35.0% |
| AAGATCGAAGCAAGAAGAAA+AGG | + | chr3_4:73237528-73237547 | Msa0520710:CDS | 35.0% | |
| AGATCGAAGCAAGAAGAAAA+GGG | + | chr3_4:73237529-73237548 | Msa0520710:CDS | 35.0% | |
| TAATGTGAAAGAGATCGAAC+TGG | - | chr3_4:73237650-73237669 | None:intergenic | 35.0% | |
| AGAAAATCAGAGATTCTGTG+AGG | - | chr3_4:73237698-73237717 | None:intergenic | 35.0% | |
| !! | GCAAAAAGCTGAAGTTTTGA+TGG | + | chr3_4:73237784-73237803 | Msa0520710:CDS | 35.0% |
| AAGCTGCTGAATATGTTACT+AGG | + | chr3_4:73237843-73237862 | Msa0520710:CDS | 35.0% | |
| TACTAGGTTGCTTATGATGT+CGG | + | chr3_4:73237859-73237878 | Msa0520710:CDS | 35.0% | |
| !!! | AAGAGATTTTGGTTTGCCAA+TGG | + | chr3_4:73237922-73237941 | Msa0520710:CDS | 35.0% |
| ! | TCTTGACGATGTTGAGTTTT+TGG | + | chr3_4:73238003-73238022 | Msa0520710:CDS | 35.0% |
| !!! | AGTTTTTGGAGCTTGTTTCT+TGG | + | chr3_4:73238017-73238036 | Msa0520710:CDS | 35.0% |
| GAAGAAGAATAAGACGATTG+TGG | + | chr3_4:73238069-73238088 | Msa0520710:CDS | 35.0% | |
| AAGAATAAGACGATTGTGGA+AGG | + | chr3_4:73238073-73238092 | Msa0520710:CDS | 35.0% | |
| AGAATAAGACGATTGTGGAA+GGG | + | chr3_4:73238074-73238093 | Msa0520710:CDS | 35.0% | |
| ! | TTTTACAGTTGAGAAGAGGT+TGG | + | chr3_4:73238312-73238331 | Msa0520710:CDS | 35.0% |
| ! | AGGCTTTTGCTTAAACATTG+TGG | + | chr3_4:73238391-73238410 | Msa0520710:CDS | 35.0% |
| AACAGAAGCTTATGATGGTT+CGG | + | chr3_4:73238459-73238478 | Msa0520710:CDS | 35.0% | |
| TTCTCCCTCCATAAAAACAA+AGG | - | chr3_4:73238502-73238521 | None:intergenic | 35.0% | |
| !! | ATTCTGAGATGGATGTTAGA+GGG | + | chr3_4:73238701-73238720 | Msa0520710:CDS | 35.0% |
| ! | GATTCATAGCAATCGATTCA+TGG | + | chr3_4:73237447-73237466 | Msa0520710:CDS | 35.0% |
| AAGATCGAAGCAAGAAGAAA+AGG | + | chr3_4:73237528-73237547 | Msa0520710:CDS | 35.0% | |
| AGATCGAAGCAAGAAGAAAA+GGG | + | chr3_4:73237529-73237548 | Msa0520710:CDS | 35.0% | |
| TAATGTGAAAGAGATCGAAC+TGG | - | chr3_4:73237650-73237669 | None:intergenic | 35.0% | |
| AGAAAATCAGAGATTCTGTG+AGG | - | chr3_4:73237698-73237717 | None:intergenic | 35.0% | |
| !! | GCAAAAAGCTGAAGTTTTGA+TGG | + | chr3_4:73237784-73237803 | Msa0520710:CDS | 35.0% |
| AAGCTGCTGAATATGTTACT+AGG | + | chr3_4:73237843-73237862 | Msa0520710:CDS | 35.0% | |
| TACTAGGTTGCTTATGATGT+CGG | + | chr3_4:73237859-73237878 | Msa0520710:CDS | 35.0% | |
| !!! | AAGAGATTTTGGTTTGCCAA+TGG | + | chr3_4:73237922-73237941 | Msa0520710:CDS | 35.0% |
| ! | TCTTGACGATGTTGAGTTTT+TGG | + | chr3_4:73238003-73238022 | Msa0520710:CDS | 35.0% |
| !!! | AGTTTTTGGAGCTTGTTTCT+TGG | + | chr3_4:73238017-73238036 | Msa0520710:CDS | 35.0% |
| GAAGAAGAATAAGACGATTG+TGG | + | chr3_4:73238069-73238088 | Msa0520710:CDS | 35.0% | |
| AAGAATAAGACGATTGTGGA+AGG | + | chr3_4:73238073-73238092 | Msa0520710:CDS | 35.0% | |
| AGAATAAGACGATTGTGGAA+GGG | + | chr3_4:73238074-73238093 | Msa0520710:CDS | 35.0% | |
| ! | TTTTACAGTTGAGAAGAGGT+TGG | + | chr3_4:73238312-73238331 | Msa0520710:CDS | 35.0% |
| ! | AGGCTTTTGCTTAAACATTG+TGG | + | chr3_4:73238391-73238410 | Msa0520710:CDS | 35.0% |
| AACAGAAGCTTATGATGGTT+CGG | + | chr3_4:73238459-73238478 | Msa0520710:CDS | 35.0% | |
| TTCTCCCTCCATAAAAACAA+AGG | - | chr3_4:73238502-73238521 | None:intergenic | 35.0% | |
| !! | ATTCTGAGATGGATGTTAGA+GGG | + | chr3_4:73238701-73238720 | Msa0520710:CDS | 35.0% |
| TCTCGAACAAGAACCAGAAA+TGG | + | chr3_4:73237619-73237638 | Msa0520710:CDS | 40.0% | |
| CGAACTGGAATAACCATTTC+TGG | - | chr3_4:73237635-73237654 | None:intergenic | 40.0% | |
| !!! | AGATTCTGTGAGGTTTTGGA+AGG | - | chr3_4:73237688-73237707 | None:intergenic | 40.0% |
| ! | TCAGAGATTCTGTGAGGTTT+TGG | - | chr3_4:73237692-73237711 | None:intergenic | 40.0% |
| GAGCTCTATAAGGATCGTAA+CGG | + | chr3_4:73237740-73237759 | Msa0520710:CDS | 40.0% | |
| AGCTCTATAAGGATCGTAAC+GGG | + | chr3_4:73237741-73237760 | Msa0520710:CDS | 40.0% | |
| !! | GGTTGATAAACGTGTTCAGT+TGG | + | chr3_4:73237880-73237899 | Msa0520710:CDS | 40.0% |
| ! | GCGCATTTTCGAAGAGATTT+TGG | + | chr3_4:73237911-73237930 | Msa0520710:CDS | 40.0% |
| !!! | GTATCCTCAACTTTTTCGTG+TGG | + | chr3_4:73237970-73237989 | Msa0520710:CDS | 40.0% |
| TTCACCACACGAAAAAGTTG+AGG | - | chr3_4:73237977-73237996 | None:intergenic | 40.0% | |
| AACTCAACATCGTCAAGAGA+AGG | - | chr3_4:73238001-73238020 | None:intergenic | 40.0% | |
| CTTCTTCTCAATCTCTGTGA+TGG | - | chr3_4:73238056-73238075 | None:intergenic | 40.0% | |
| GAATAAGACGATTGTGGAAG+GGG | + | chr3_4:73238075-73238094 | Msa0520710:CDS | 40.0% | |
| TCTCCTTATGCTGATGCAAA+GGG | + | chr3_4:73238226-73238245 | Msa0520710:CDS | 40.0% | |
| AAACCCTTTGCATCAGCATA+AGG | - | chr3_4:73238232-73238251 | None:intergenic | 40.0% | |
| !! | TTATGCCTCAGAAGTTGATG+AGG | + | chr3_4:73238371-73238390 | Msa0520710:CDS | 40.0% |
| AAAAGCCTCATCAACTTCTG+AGG | - | chr3_4:73238379-73238398 | None:intergenic | 40.0% | |
| !! | GAGAAGCTTCTTAGTCTTGT+TGG | + | chr3_4:73238517-73238536 | Msa0520710:CDS | 40.0% |
| !! | CTTAGTCTTGTTGGCTATAG+AGG | + | chr3_4:73238526-73238545 | Msa0520710:CDS | 40.0% |
| AGGAAGGAAGAAGAAGTTTG+AGG | + | chr3_4:73238546-73238565 | Msa0520710:CDS | 40.0% | |
| AAGGAAGAAGAAGTTTGAGG+CGG | + | chr3_4:73238549-73238568 | Msa0520710:CDS | 40.0% | |
| ! | GATAGTGATAGTGATGAGGA+AGG | + | chr3_4:73238571-73238590 | Msa0520710:CDS | 40.0% |
| TAAAGGATCCTTGTACTCCA+AGG | - | chr3_4:73238671-73238690 | None:intergenic | 40.0% | |
| !! | GATTCTGAGATGGATGTTAG+AGG | + | chr3_4:73238700-73238719 | Msa0520710:CDS | 40.0% |
| TCTCGAACAAGAACCAGAAA+TGG | + | chr3_4:73237619-73237638 | Msa0520710:CDS | 40.0% | |
| CGAACTGGAATAACCATTTC+TGG | - | chr3_4:73237635-73237654 | None:intergenic | 40.0% | |
| !!! | AGATTCTGTGAGGTTTTGGA+AGG | - | chr3_4:73237688-73237707 | None:intergenic | 40.0% |
| ! | TCAGAGATTCTGTGAGGTTT+TGG | - | chr3_4:73237692-73237711 | None:intergenic | 40.0% |
| GAGCTCTATAAGGATCGTAA+CGG | + | chr3_4:73237740-73237759 | Msa0520710:CDS | 40.0% | |
| AGCTCTATAAGGATCGTAAC+GGG | + | chr3_4:73237741-73237760 | Msa0520710:CDS | 40.0% | |
| !! | GGTTGATAAACGTGTTCAGT+TGG | + | chr3_4:73237880-73237899 | Msa0520710:CDS | 40.0% |
| ! | GCGCATTTTCGAAGAGATTT+TGG | + | chr3_4:73237911-73237930 | Msa0520710:CDS | 40.0% |
| !!! | GTATCCTCAACTTTTTCGTG+TGG | + | chr3_4:73237970-73237989 | Msa0520710:CDS | 40.0% |
| TTCACCACACGAAAAAGTTG+AGG | - | chr3_4:73237977-73237996 | None:intergenic | 40.0% | |
| AACTCAACATCGTCAAGAGA+AGG | - | chr3_4:73238001-73238020 | None:intergenic | 40.0% | |
| CTTCTTCTCAATCTCTGTGA+TGG | - | chr3_4:73238056-73238075 | None:intergenic | 40.0% | |
| GAATAAGACGATTGTGGAAG+GGG | + | chr3_4:73238075-73238094 | Msa0520710:CDS | 40.0% | |
| TCTCCTTATGCTGATGCAAA+GGG | + | chr3_4:73238226-73238245 | Msa0520710:CDS | 40.0% | |
| AAACCCTTTGCATCAGCATA+AGG | - | chr3_4:73238232-73238251 | None:intergenic | 40.0% | |
| !! | TTATGCCTCAGAAGTTGATG+AGG | + | chr3_4:73238371-73238390 | Msa0520710:CDS | 40.0% |
| AAAAGCCTCATCAACTTCTG+AGG | - | chr3_4:73238379-73238398 | None:intergenic | 40.0% | |
| !! | GAGAAGCTTCTTAGTCTTGT+TGG | + | chr3_4:73238517-73238536 | Msa0520710:CDS | 40.0% |
| !! | CTTAGTCTTGTTGGCTATAG+AGG | + | chr3_4:73238526-73238545 | Msa0520710:CDS | 40.0% |
| AGGAAGGAAGAAGAAGTTTG+AGG | + | chr3_4:73238546-73238565 | Msa0520710:CDS | 40.0% | |
| AAGGAAGAAGAAGTTTGAGG+CGG | + | chr3_4:73238549-73238568 | Msa0520710:CDS | 40.0% | |
| ! | GATAGTGATAGTGATGAGGA+AGG | + | chr3_4:73238571-73238590 | Msa0520710:CDS | 40.0% |
| TAAAGGATCCTTGTACTCCA+AGG | - | chr3_4:73238671-73238690 | None:intergenic | 40.0% | |
| !! | GATTCTGAGATGGATGTTAG+AGG | + | chr3_4:73238700-73238719 | Msa0520710:CDS | 40.0% |
| GTTATTCGCATTGGGAACGA+TGG | + | chr3_4:73237483-73237502 | Msa0520710:CDS | 45.0% | |
| TCGAAGCAGCAACAGAGAAA+TGG | + | chr3_4:73237561-73237580 | Msa0520710:CDS | 45.0% | |
| GCTCTATAAGGATCGTAACG+GGG | + | chr3_4:73237742-73237761 | Msa0520710:CDS | 45.0% | |
| ! | AATGGTAGCGAAAGCAAACC+CGG | - | chr3_4:73238121-73238140 | None:intergenic | 45.0% |
| GTCTCCTTATGCTGATGCAA+AGG | + | chr3_4:73238225-73238244 | Msa0520710:CDS | 45.0% | |
| ! | GATGCAAAGGGTTTGAAACC+TGG | + | chr3_4:73238238-73238257 | Msa0520710:CDS | 45.0% |
| ATCACCTAACTCACTTCCGT+TGG | + | chr3_4:73238341-73238360 | Msa0520710:CDS | 45.0% | |
| TCACCTAACTCACTTCCGTT+GGG | + | chr3_4:73238342-73238361 | Msa0520710:CDS | 45.0% | |
| GAGGCATAACTAACTCCCAA+CGG | - | chr3_4:73238360-73238379 | None:intergenic | 45.0% | |
| ! | ATGTTTCTGAGAGGGGTAAG+AGG | + | chr3_4:73238422-73238441 | Msa0520710:CDS | 45.0% |
| ! | GTCTTGTTGGCTATAGAGGA+AGG | + | chr3_4:73238530-73238549 | Msa0520710:CDS | 45.0% |
| ! | AGTGATAGTGATGAGGAAGG+CGG | + | chr3_4:73238574-73238593 | Msa0520710:CDS | 45.0% |
| GCTTCAGAGTGATTCTGATG+TGG | + | chr3_4:73238612-73238631 | Msa0520710:CDS | 45.0% | |
| TCAGAGTGATTCTGATGTGG+AGG | + | chr3_4:73238615-73238634 | Msa0520710:CDS | 45.0% | |
| TGATTCTGATGTGGAGGACT+TGG | + | chr3_4:73238621-73238640 | Msa0520710:CDS | 45.0% | |
| ACAGGATACCTTGGAGTACA+AGG | + | chr3_4:73238660-73238679 | Msa0520710:CDS | 45.0% | |
| GTACAAGGATCCTTTACTCG+AGG | + | chr3_4:73238675-73238694 | Msa0520710:CDS | 45.0% | |
| TCAGAATCGTCCTCGAGTAA+AGG | - | chr3_4:73238688-73238707 | None:intergenic | 45.0% | |
| GTTATTCGCATTGGGAACGA+TGG | + | chr3_4:73237483-73237502 | Msa0520710:CDS | 45.0% | |
| TCGAAGCAGCAACAGAGAAA+TGG | + | chr3_4:73237561-73237580 | Msa0520710:CDS | 45.0% | |
| GCTCTATAAGGATCGTAACG+GGG | + | chr3_4:73237742-73237761 | Msa0520710:CDS | 45.0% | |
| ! | AATGGTAGCGAAAGCAAACC+CGG | - | chr3_4:73238121-73238140 | None:intergenic | 45.0% |
| GTCTCCTTATGCTGATGCAA+AGG | + | chr3_4:73238225-73238244 | Msa0520710:CDS | 45.0% | |
| ! | GATGCAAAGGGTTTGAAACC+TGG | + | chr3_4:73238238-73238257 | Msa0520710:CDS | 45.0% |
| ATCACCTAACTCACTTCCGT+TGG | + | chr3_4:73238341-73238360 | Msa0520710:CDS | 45.0% | |
| TCACCTAACTCACTTCCGTT+GGG | + | chr3_4:73238342-73238361 | Msa0520710:CDS | 45.0% | |
| GAGGCATAACTAACTCCCAA+CGG | - | chr3_4:73238360-73238379 | None:intergenic | 45.0% | |
| ! | ATGTTTCTGAGAGGGGTAAG+AGG | + | chr3_4:73238422-73238441 | Msa0520710:CDS | 45.0% |
| ! | GTCTTGTTGGCTATAGAGGA+AGG | + | chr3_4:73238530-73238549 | Msa0520710:CDS | 45.0% |
| ! | AGTGATAGTGATGAGGAAGG+CGG | + | chr3_4:73238574-73238593 | Msa0520710:CDS | 45.0% |
| GCTTCAGAGTGATTCTGATG+TGG | + | chr3_4:73238612-73238631 | Msa0520710:CDS | 45.0% | |
| TCAGAGTGATTCTGATGTGG+AGG | + | chr3_4:73238615-73238634 | Msa0520710:CDS | 45.0% | |
| TGATTCTGATGTGGAGGACT+TGG | + | chr3_4:73238621-73238640 | Msa0520710:CDS | 45.0% | |
| ACAGGATACCTTGGAGTACA+AGG | + | chr3_4:73238660-73238679 | Msa0520710:CDS | 45.0% | |
| GTACAAGGATCCTTTACTCG+AGG | + | chr3_4:73238675-73238694 | Msa0520710:CDS | 45.0% | |
| TCAGAATCGTCCTCGAGTAA+AGG | - | chr3_4:73238688-73238707 | None:intergenic | 45.0% | |
| ! | AGGATCGTAACGGGGTGTTA+TGG | + | chr3_4:73237750-73237769 | Msa0520710:CDS | 50.0% |
| AACTGAAACCGAACACACCC+CGG | + | chr3_4:73238099-73238118 | Msa0520710:CDS | 50.0% | |
| ! | ATGGTAGCGAAAGCAAACCC+GGG | - | chr3_4:73238120-73238139 | None:intergenic | 50.0% |
| ACTCCCAACGGAAGTGAGTT+AGG | - | chr3_4:73238348-73238367 | None:intergenic | 50.0% | |
| ! | GGCGGATAGTGATAGTGATG+AGG | + | chr3_4:73238567-73238586 | Msa0520710:CDS | 50.0% |
| TGATGTGGAGGACTTGGATG+TGG | + | chr3_4:73238627-73238646 | Msa0520710:CDS | 50.0% | |
| GCTTGAGCAACAGGATACCT+TGG | + | chr3_4:73238651-73238670 | Msa0520710:CDS | 50.0% | |
| ! | ACTCGAGGACGATTCTGAGA+TGG | + | chr3_4:73238690-73238709 | Msa0520710:CDS | 50.0% |
| ! | AGGATCGTAACGGGGTGTTA+TGG | + | chr3_4:73237750-73237769 | Msa0520710:CDS | 50.0% |
| AACTGAAACCGAACACACCC+CGG | + | chr3_4:73238099-73238118 | Msa0520710:CDS | 50.0% | |
| ! | ATGGTAGCGAAAGCAAACCC+GGG | - | chr3_4:73238120-73238139 | None:intergenic | 50.0% |
| ACTCCCAACGGAAGTGAGTT+AGG | - | chr3_4:73238348-73238367 | None:intergenic | 50.0% | |
| ! | GGCGGATAGTGATAGTGATG+AGG | + | chr3_4:73238567-73238586 | Msa0520710:CDS | 50.0% |
| TGATGTGGAGGACTTGGATG+TGG | + | chr3_4:73238627-73238646 | Msa0520710:CDS | 50.0% | |
| GCTTGAGCAACAGGATACCT+TGG | + | chr3_4:73238651-73238670 | Msa0520710:CDS | 50.0% | |
| ! | ACTCGAGGACGATTCTGAGA+TGG | + | chr3_4:73238690-73238709 | Msa0520710:CDS | 50.0% |
| ! | CGTAACGGGGTGTTATGGTG+TGG | + | chr3_4:73237755-73237774 | Msa0520710:CDS | 55.0% |
| ACTGAAACCGAACACACCCC+GGG | + | chr3_4:73238100-73238119 | Msa0520710:CDS | 55.0% | |
| AAGCAAACCCGGGGTGTGTT+CGG | - | chr3_4:73238110-73238129 | None:intergenic | 55.0% | |
| ! | TGGTAGCGAAAGCAAACCCG+GGG | - | chr3_4:73238119-73238138 | None:intergenic | 55.0% |
| AGTGATGAGGAAGGCGGTGA+TGG | + | chr3_4:73238580-73238599 | Msa0520710:CDS | 55.0% | |
| GGATGTGGAGCTTGAGCAAC+AGG | + | chr3_4:73238642-73238661 | Msa0520710:CDS | 55.0% | |
| ! | CGTAACGGGGTGTTATGGTG+TGG | + | chr3_4:73237755-73237774 | Msa0520710:CDS | 55.0% |
| ACTGAAACCGAACACACCCC+GGG | + | chr3_4:73238100-73238119 | Msa0520710:CDS | 55.0% | |
| AAGCAAACCCGGGGTGTGTT+CGG | - | chr3_4:73238110-73238129 | None:intergenic | 55.0% | |
| ! | TGGTAGCGAAAGCAAACCCG+GGG | - | chr3_4:73238119-73238138 | None:intergenic | 55.0% |
| AGTGATGAGGAAGGCGGTGA+TGG | + | chr3_4:73238580-73238599 | Msa0520710:CDS | 55.0% | |
| GGATGTGGAGCTTGAGCAAC+AGG | + | chr3_4:73238642-73238661 | Msa0520710:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 73237437 | 73238732 | 73237437 | ID=Msa0520710;Name=Msa0520710 |
| chr3_4 | mRNA | 73237437 | 73238732 | 73237437 | ID=Msa0520710-mRNA-1;Parent=Msa0520710;Name=Msa0520710-mRNA-1;_AED=0.22;_eAED=0.22;_QI=0|-1|0|1|-1|1|1|0|431 |
| chr3_4 | exon | 73237437 | 73238732 | 73237437 | ID=Msa0520710-mRNA-1:exon:20451;Parent=Msa0520710-mRNA-1 |
| chr3_4 | CDS | 73237437 | 73238732 | 73237437 | ID=Msa0520710-mRNA-1:cds;Parent=Msa0520710-mRNA-1 |
| Gene Sequence |
| Protein sequence |
