Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1435160 | XP_003604140.1 | 97.319 | 634 | 12 | 3 | 1 | 633 | 1 | 630 | 0.0 | 1236 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1435160 | sp|O04130|SERA2_ARATH | 76.442 | 624 | 139 | 3 | 16 | 633 | 3 | 624 | 0.0 | 964 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1435160 | G7JVK0 | 97.319 | 634 | 12 | 3 | 1 | 633 | 1 | 630 | 0.0 | 1236 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0010890 | Msa1435160 | 0.991370 | 2.733661e-187 | -8.615850e-47 |
| Msa0012080 | Msa1435160 | 0.800384 | 1.478253e-48 | -8.615850e-47 |
| Msa0029240 | Msa1435160 | 0.801628 | 8.231703e-49 | -8.615850e-47 |
| Msa0034270 | Msa1435160 | 0.818105 | 2.331406e-52 | -8.615850e-47 |
| Msa0054480 | Msa1435160 | 0.834986 | 2.182146e-56 | -8.615850e-47 |
| Msa0063890 | Msa1435160 | 0.817720 | 2.848509e-52 | -8.615850e-47 |
| Msa0070700 | Msa1435160 | 0.817210 | 3.710814e-52 | -8.615850e-47 |
| Msa0100090 | Msa1435160 | 0.804402 | 2.197987e-49 | -8.615850e-47 |
| Msa0101440 | Msa1435160 | 0.818922 | 1.522446e-52 | -8.615850e-47 |
| Msa0108410 | Msa1435160 | 0.807037 | 6.145707e-50 | -8.615850e-47 |
| Msa0116770 | Msa1435160 | 0.803095 | 4.104763e-49 | -8.615850e-47 |
| Msa0118590 | Msa1435160 | 0.803046 | 4.201291e-49 | -8.615850e-47 |
| Msa1353890 | Msa1435160 | 0.802692 | 4.971963e-49 | -8.615850e-47 |
| Msa1387870 | Msa1435160 | 0.815103 | 1.097395e-51 | -8.615850e-47 |
| Msa1392240 | Msa1435160 | 0.828513 | 8.622660e-55 | -8.615850e-47 |
| Msa1393410 | Msa1435160 | 0.802981 | 4.334963e-49 | -8.615850e-47 |
| Msa1412540 | Msa1435160 | 0.811905 | 5.541804e-51 | -8.615850e-47 |
| Msa1414520 | Msa1435160 | 0.993228 | 2.659485e-198 | -8.615850e-47 |
| Msa1419370 | Msa1435160 | 0.818569 | 1.830650e-52 | -8.615850e-47 |
| Msa1424750 | Msa1435160 | 0.806274 | 8.906751e-50 | -8.615850e-47 |
| Msa1425090 | Msa1435160 | 0.854261 | 1.385027e-61 | -8.615850e-47 |
| Msa1435160 | Msa1435420 | 0.803095 | 4.105500e-49 | -8.615850e-47 |
| Msa1435160 | Msa1440560 | 0.850874 | 1.280087e-60 | -8.615850e-47 |
| Msa1435160 | Msa1446950 | 0.817196 | 3.738752e-52 | -8.615850e-47 |
| Msa1435160 | Msa1453320 | 0.829019 | 6.506468e-55 | -8.615850e-47 |
| Msa1435160 | Msa1453360 | 0.818352 | 2.049750e-52 | -8.615850e-47 |
| Msa1435160 | Msa1459100 | 0.853302 | 2.613803e-61 | -8.615850e-47 |
| Msa0622170 | Msa1435160 | -0.802812 | 4.697338e-49 | -8.615850e-47 |
| Msa0625190 | Msa1435160 | 0.952124 | 4.751959e-110 | -8.615850e-47 |
| Msa0625720 | Msa1435160 | 0.819044 | 1.428121e-52 | -8.615850e-47 |
| Msa0626510 | Msa1435160 | 0.800762 | 1.237866e-48 | -8.615850e-47 |
| Msa0629510 | Msa1435160 | 0.805251 | 1.460583e-49 | -8.615850e-47 |
| Msa0633700 | Msa1435160 | 0.822482 | 2.313293e-53 | -8.615850e-47 |
| Msa0643570 | Msa1435160 | 0.806661 | 7.381083e-50 | -8.615850e-47 |
| Msa0648860 | Msa1435160 | 0.804764 | 1.847162e-49 | -8.615850e-47 |
| Msa0661650 | Msa1435160 | 0.850024 | 2.218516e-60 | -8.615850e-47 |
| Msa0666650 | Msa1435160 | 0.833757 | 4.439537e-56 | -8.615850e-47 |
| Msa0667270 | Msa1435160 | 0.803245 | 3.821609e-49 | -8.615850e-47 |
| Msa0686560 | Msa1435160 | 0.804521 | 2.075835e-49 | -8.615850e-47 |
| Msa0708310 | Msa1435160 | 0.817434 | 3.304687e-52 | -8.615850e-47 |
| Msa0725050 | Msa1435160 | 0.806836 | 6.779380e-50 | -8.615850e-47 |
| Msa0817460 | Msa1435160 | 0.803937 | 2.746665e-49 | -8.615850e-47 |
| Msa0831530 | Msa1435160 | 0.812125 | 4.962821e-51 | -8.615850e-47 |
| Msa0127800 | Msa1435160 | 0.800267 | 1.561227e-48 | -8.615850e-47 |
| Msa0136070 | Msa1435160 | 0.807909 | 4.014792e-50 | -8.615850e-47 |
| Msa0144370 | Msa1435160 | 0.805019 | 1.634023e-49 | -8.615850e-47 |
| Msa0168500 | Msa1435160 | 0.801136 | 1.038240e-48 | -8.615850e-47 |
| Msa0173660 | Msa1435160 | 0.806722 | 7.164468e-50 | -8.615850e-47 |
| Msa0187120 | Msa1435160 | 0.820172 | 7.890961e-53 | -8.615850e-47 |
| Msa0197660 | Msa1435160 | 0.837957 | 3.825526e-57 | -8.615850e-47 |
| Msa0212310 | Msa1435160 | 0.803752 | 3.000963e-49 | -8.615850e-47 |
| Msa0217700 | Msa1435160 | 0.802807 | 4.708037e-49 | -8.615850e-47 |
| Msa0225100 | Msa1435160 | 0.805529 | 1.277579e-49 | -8.615850e-47 |
| Msa0225680 | Msa1435160 | 0.804566 | 2.031124e-49 | -8.615850e-47 |
| Msa1225700 | Msa1435160 | 0.812354 | 4.423557e-51 | -8.615850e-47 |
| Msa1229600 | Msa1435160 | 0.806773 | 6.990333e-50 | -8.615850e-47 |
| Msa1235380 | Msa1435160 | 0.800730 | 1.256822e-48 | -8.615850e-47 |
| Msa1249490 | Msa1435160 | 0.804850 | 1.772204e-49 | -8.615850e-47 |
| Msa1276530 | Msa1435160 | 0.841643 | 4.194834e-58 | -8.615850e-47 |
| Msa1277150 | Msa1435160 | 0.820682 | 6.027968e-53 | -8.615850e-47 |
| Msa1287460 | Msa1435160 | 0.808296 | 3.320057e-50 | -8.615850e-47 |
| Msa1304890 | Msa1435160 | -0.809037 | 2.305922e-50 | -8.615850e-47 |
| Msa1310210 | Msa1435160 | 0.801821 | 7.515313e-49 | -8.615850e-47 |
| Msa1323710 | Msa1435160 | 0.805946 | 1.044056e-49 | -8.615850e-47 |
| Msa1331000 | Msa1435160 | 0.800928 | 1.145054e-48 | -8.615850e-47 |
| Msa1332000 | Msa1435160 | 0.805479 | 1.308467e-49 | -8.615850e-47 |
| Msa1332070 | Msa1435160 | 0.818622 | 1.780766e-52 | -8.615850e-47 |
| Msa0365780 | Msa1435160 | 0.820667 | 6.076265e-53 | -8.615850e-47 |
| Msa0367870 | Msa1435160 | 0.826359 | 2.833667e-54 | -8.615850e-47 |
| Msa0372340 | Msa1435160 | 0.805666 | 1.195582e-49 | -8.615850e-47 |
| Msa0386090 | Msa1435160 | 0.827471 | 1.536032e-54 | -8.615850e-47 |
| Msa0391320 | Msa1435160 | 0.823438 | 1.385050e-53 | -8.615850e-47 |
| Msa0395860 | Msa1435160 | 0.811787 | 5.877403e-51 | -8.615850e-47 |
| Msa0403640 | Msa1435160 | 0.808482 | 3.030545e-50 | -8.615850e-47 |
| Msa0404190 | Msa1435160 | 0.813293 | 2.753975e-51 | -8.615850e-47 |
| Msa0416650 | Msa1435160 | 0.809841 | 1.550194e-50 | -8.615850e-47 |
| Msa0428080 | Msa1435160 | 0.837753 | 4.315566e-57 | -8.615850e-47 |
| Msa0440400 | Msa1435160 | 0.801123 | 1.044540e-48 | -8.615850e-47 |
| Msa0465410 | Msa1435160 | 0.847565 | 1.066825e-59 | -8.615850e-47 |
| Msa1019000 | Msa1435160 | 0.820335 | 7.243656e-53 | -8.615850e-47 |
| Msa1019150 | Msa1435160 | 0.827739 | 1.324790e-54 | -8.615850e-47 |
| Msa1037780 | Msa1435160 | 0.839031 | 2.020376e-57 | -8.615850e-47 |
| Msa1039710 | Msa1435160 | -0.800153 | 1.647050e-48 | -8.615850e-47 |
| Msa1054990 | Msa1435160 | 0.808498 | 3.006634e-50 | -8.615850e-47 |
| Msa1066670 | Msa1435160 | 0.802125 | 6.505967e-49 | -8.615850e-47 |
| Msa1083840 | Msa1435160 | 0.800178 | 1.627733e-48 | -8.615850e-47 |
| Msa1084960 | Msa1435160 | 0.800930 | 1.143698e-48 | -8.615850e-47 |
| Msa1089940 | Msa1435160 | 0.992381 | 5.965326e-193 | -8.615850e-47 |
| Msa1100050 | Msa1435160 | 0.817905 | 2.587170e-52 | -8.615850e-47 |
| Msa1104090 | Msa1435160 | 0.821378 | 4.168046e-53 | -8.615850e-47 |
| Msa0239800 | Msa1435160 | 0.831460 | 1.648790e-55 | -8.615850e-47 |
| Msa0264830 | Msa1435160 | 0.810061 | 1.389752e-50 | -8.615850e-47 |
| Msa0266180 | Msa1435160 | 0.805839 | 1.099511e-49 | -8.615850e-47 |
| Msa0269810 | Msa1435160 | 0.811509 | 6.757285e-51 | -8.615850e-47 |
| Msa0277820 | Msa1435160 | 0.815701 | 8.079633e-52 | -8.615850e-47 |
| Msa0279700 | Msa1435160 | 0.826486 | 2.642920e-54 | -8.615850e-47 |
| Msa0283910 | Msa1435160 | 0.803699 | 3.077831e-49 | -8.615850e-47 |
| Msa0287740 | Msa1435160 | 0.804195 | 2.427131e-49 | -8.615850e-47 |
| Msa0317510 | Msa1435160 | 0.830727 | 2.495816e-55 | -8.615850e-47 |
| Msa0337620 | Msa1435160 | 0.801974 | 6.988505e-49 | -8.615850e-47 |
| Msa0340340 | Msa1435160 | 0.808961 | 2.394919e-50 | -8.615850e-47 |
| Msa1121490 | Msa1435160 | 0.803332 | 3.666532e-49 | -8.615850e-47 |
| Msa1129550 | Msa1435160 | 0.822820 | 1.930951e-53 | -8.615850e-47 |
| Msa1129730 | Msa1435160 | 0.823696 | 1.205239e-53 | -8.615850e-47 |
| Msa1131050 | Msa1435160 | 0.851713 | 7.419326e-61 | -8.615850e-47 |
| Msa1147740 | Msa1435160 | 0.834680 | 2.605742e-56 | -8.615850e-47 |
| Msa1162780 | Msa1435160 | 0.802981 | 4.334963e-49 | -8.615850e-47 |
| Msa1171710 | Msa1435160 | 0.831022 | 2.111890e-55 | -8.615850e-47 |
| Msa1175180 | Msa1435160 | 0.818204 | 2.214853e-52 | -8.615850e-47 |
| Msa1178180 | Msa1435160 | 0.810924 | 9.049271e-51 | -8.615850e-47 |
| Msa1186950 | Msa1435160 | -0.823769 | 1.158681e-53 | -8.615850e-47 |
| Msa0511270 | Msa1435160 | 0.844384 | 7.816908e-59 | -8.615850e-47 |
| Msa0511370 | Msa1435160 | 0.814312 | 1.642653e-51 | -8.615850e-47 |
| Msa0512750 | Msa1435160 | 0.803898 | 2.798187e-49 | -8.615850e-47 |
| Msa0526070 | Msa1435160 | -0.803522 | 3.348665e-49 | -8.615850e-47 |
| Msa0529890 | Msa1435160 | 0.818700 | 1.709573e-52 | -8.615850e-47 |
| Msa0585560 | Msa1435160 | 0.814199 | 1.740181e-51 | -8.615850e-47 |
| Msa0588870 | Msa1435160 | 0.837399 | 5.318254e-57 | -8.615850e-47 |
| Msa0589280 | Msa1435160 | 0.815774 | 7.781530e-52 | -8.615850e-47 |
| Msa0602690 | Msa1435160 | 0.811806 | 5.821949e-51 | -8.615850e-47 |
| Msa0842650 | Msa1435160 | 0.802480 | 5.500052e-49 | -8.615850e-47 |
| Msa0870380 | Msa1435160 | 0.800472 | 1.418127e-48 | -8.615850e-47 |
| Msa0915770 | Msa1435160 | 0.815044 | 1.131107e-51 | -8.615850e-47 |
| Msa0915800 | Msa1435160 | 0.811398 | 7.143850e-51 | -8.615850e-47 |
| Msa0915830 | Msa1435160 | 0.809075 | 2.263360e-50 | -8.615850e-47 |
| Msa0936060 | Msa1435160 | 0.806481 | 8.056229e-50 | -8.615850e-47 |
| Msa0938480 | Msa1435160 | 0.818254 | 2.157464e-52 | -8.615850e-47 |
| Msa0939250 | Msa1435160 | 0.808268 | 3.366215e-50 | -8.615850e-47 |
| Msa0972960 | Msa1435160 | 0.802670 | 5.024919e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1435160 | MtrunA17_Chr4g0000511 | 97.319 | 634 | 12 | 3 | 1 | 633 | 1 | 630 | 0.0 | 1236 |
| Msa1435160 | MtrunA17_Chr1g0208141 | 77.939 | 553 | 122 | 0 | 81 | 633 | 45 | 597 | 0.0 | 903 |
| Msa1435160 | MtrunA17_Chr1g0210971 | 34.564 | 298 | 172 | 7 | 120 | 395 | 50 | 346 | 2.08e-32 | 129 |
| Msa1435160 | MtrunA17_Chr3g0077771 | 31.890 | 254 | 153 | 5 | 154 | 390 | 117 | 367 | 2.52e-30 | 123 |
| Msa1435160 | MtrunA17_Chr4g0004721 | 29.412 | 255 | 171 | 4 | 154 | 407 | 68 | 314 | 4.49e-29 | 117 |
| Msa1435160 | MtrunA17_Chr4g0004711 | 29.183 | 257 | 167 | 5 | 155 | 407 | 68 | 313 | 5.67e-28 | 114 |
| Msa1435160 | MtrunA17_Chr4g0004681 | 27.907 | 258 | 172 | 4 | 154 | 411 | 67 | 310 | 1.05e-26 | 110 |
| Msa1435160 | MtrunA17_Chr6g0450811 | 30.120 | 249 | 164 | 4 | 155 | 396 | 122 | 367 | 3.99e-26 | 110 |
| Msa1435160 | MtrunA17_Chr8g0351111 | 29.811 | 265 | 167 | 6 | 155 | 414 | 76 | 326 | 2.79e-23 | 101 |
| Msa1435160 | MtrunA17_Chr4g0004741 | 31.154 | 260 | 164 | 6 | 154 | 411 | 67 | 313 | 3.93e-22 | 97.8 |
| Msa1435160 | MtrunA17_Chr2g0331641 | 29.885 | 261 | 161 | 7 | 155 | 407 | 68 | 314 | 4.88e-20 | 91.7 |
| Msa1435160 | MtrunA17_Chr6g0450821 | 27.347 | 245 | 157 | 4 | 155 | 396 | 92 | 318 | 9.45e-20 | 90.9 |
| Msa1435160 | MtrunA17_Chr8g0351121 | 29.070 | 258 | 168 | 7 | 130 | 381 | 89 | 337 | 3.87e-19 | 89.7 |
| Msa1435160 | MtrunA17_Chr8g0351141 | 25.670 | 261 | 173 | 6 | 155 | 409 | 79 | 324 | 9.86e-18 | 84.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1435160 | AT1G17745.1 | 76.442 | 624 | 139 | 3 | 16 | 633 | 3 | 624 | 0.0 | 964 |
| Msa1435160 | AT1G17745.2 | 73.118 | 651 | 140 | 5 | 16 | 633 | 3 | 651 | 0.0 | 945 |
| Msa1435160 | AT4G34200.1 | 77.034 | 553 | 127 | 0 | 81 | 633 | 51 | 603 | 0.0 | 893 |
| Msa1435160 | AT3G19480.1 | 76.427 | 543 | 128 | 0 | 91 | 633 | 46 | 588 | 0.0 | 870 |
| Msa1435160 | AT1G68010.1 | 34.564 | 298 | 172 | 7 | 120 | 395 | 50 | 346 | 1.11e-31 | 127 |
| Msa1435160 | AT1G68010.3 | 34.386 | 285 | 164 | 7 | 120 | 382 | 50 | 333 | 8.31e-31 | 124 |
| Msa1435160 | AT1G68010.2 | 34.783 | 299 | 171 | 8 | 120 | 395 | 50 | 347 | 3.82e-30 | 123 |
| Msa1435160 | AT1G79870.1 | 30.980 | 255 | 165 | 6 | 155 | 407 | 68 | 313 | 1.76e-27 | 113 |
| Msa1435160 | AT5G14780.2 | 31.532 | 222 | 148 | 3 | 161 | 378 | 112 | 333 | 4.18e-27 | 114 |
| Msa1435160 | AT5G14780.3 | 31.532 | 222 | 148 | 3 | 161 | 378 | 100 | 321 | 4.20e-27 | 113 |
| Msa1435160 | AT5G14780.1 | 31.532 | 222 | 148 | 3 | 161 | 378 | 126 | 347 | 9.18e-27 | 113 |
| Msa1435160 | AT1G12550.1 | 29.352 | 293 | 186 | 8 | 122 | 409 | 43 | 319 | 9.77e-27 | 111 |
| Msa1435160 | AT1G72190.1 | 30.380 | 237 | 154 | 4 | 155 | 382 | 116 | 350 | 2.79e-26 | 111 |
| Msa1435160 | AT2G45630.2 | 28.179 | 291 | 193 | 8 | 122 | 409 | 59 | 336 | 2.06e-22 | 99.4 |
| Msa1435160 | AT1G79870.2 | 29.528 | 254 | 151 | 6 | 155 | 407 | 68 | 294 | 5.62e-22 | 97.1 |
Find 163 sgRNAs with CRISPR-Local
Find 230 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCAACTCCTTAATTATTAT+TGG | 0.149075 | tig0027616:+39412 | Msa1435160:five_prime_UTR |
| TTCTCAAGAGCTTCCTTATT+TGG | 0.155413 | tig0027616:-42668 | None:intergenic |
| TGATACAGCACTTGCGAATT+TGG | 0.169233 | tig0027616:-42396 | None:intergenic |
| CTACAAGCTGCTACTGAATT+TGG | 0.182846 | tig0027616:+40106 | Msa1435160:CDS |
| AAAACAAACCTGTGCTTCTT+TGG | 0.221839 | tig0027616:-41599 | None:intergenic |
| TTCCTTAACTCCAACACTTT+TGG | 0.245786 | tig0027616:+39701 | Msa1435160:CDS |
| TGGGAAAACATTAGCAATAA+TGG | 0.251279 | tig0027616:+40813 | Msa1435160:CDS |
| CATTAAACATAGTAGATTAT+AGG | 0.252693 | tig0027616:-43204 | None:intergenic |
| CTTACATGTGTGGGATCTTT+TGG | 0.261096 | tig0027616:+42470 | Msa1435160:CDS |
| CCACATTGGATATTTGTATC+TGG | 0.271958 | tig0027616:-42370 | None:intergenic |
| CATGTACCATACCGGCTTTA+AGG | 0.285448 | tig0027616:-40234 | None:intergenic |
| ATCTTCTTGCATAGGTCTTC+TGG | 0.285848 | tig0027616:-39962 | None:intergenic |
| TTGCACTAACTTACTGTCTT+TGG | 0.289295 | tig0027616:-41536 | None:intergenic |
| TATTGGTTTCTGTTATATAT+AGG | 0.300629 | tig0027616:+39429 | Msa1435160:five_prime_UTR |
| ACATTAGCAATAATGGGATT+TGG | 0.308937 | tig0027616:+40820 | Msa1435160:CDS |
| ACAGAAACCAATAATAATTA+AGG | 0.311830 | tig0027616:-39419 | None:intergenic |
| ATGAGAGAGTTTAATGTTGT+TGG | 0.329026 | tig0027616:-39732 | None:intergenic |
| CATTTGTATTCATCCTTTGA+TGG | 0.330887 | tig0027616:+43173 | Msa1435160:three_prime_UTR |
| AAGGAAGCTCTTGAGAATAT+TGG | 0.341193 | tig0027616:+42674 | Msa1435160:CDS |
| GGTAAAGTCGGAAACATATT+AGG | 0.343317 | tig0027616:+42557 | Msa1435160:CDS |
| TCACCAGGTATTATCAGAAT+TGG | 0.344756 | tig0027616:+42061 | Msa1435160:intron |
| GGGAAAACATTAGCAATAAT+GGG | 0.345954 | tig0027616:+40814 | Msa1435160:CDS |
| TTGACAATTGTGTTTGATAT+TGG | 0.351660 | tig0027616:-42248 | None:intergenic |
| TTCCAAAAGTGTTGGAGTTA+AGG | 0.352126 | tig0027616:-39703 | None:intergenic |
| GCGTAGGAAGAAAGCGCTTA+TGG | 0.355828 | tig0027616:+42625 | Msa1435160:CDS |
| GTTAAGGAATGAGAGATTAG+AGG | 0.361871 | tig0027616:-39687 | None:intergenic |
| TTGAAAACTTTGTTAGTAGT+TGG | 0.364330 | tig0027616:-41012 | None:intergenic |
| GCCTGCTTCTCCGAGTTTCT+CGG | 0.380012 | tig0027616:-39888 | None:intergenic |
| CGTCGATGAAGAGCCAAATA+AGG | 0.383184 | tig0027616:+42655 | Msa1435160:CDS |
| AGATAGAAGAAAAGGTTTAG+AGG | 0.383296 | tig0027616:-39515 | None:intergenic |
| GCTCTATCAGCTGGAGCATA+AGG | 0.392374 | tig0027616:-40907 | None:intergenic |
| TGAGGTTTGGTGGTTGGTGG+AGG | 0.397943 | tig0027616:-39359 | None:intergenic |
| ATGTACCATACCGGCTTTAA+GGG | 0.400835 | tig0027616:-40233 | None:intergenic |
| TTCTTCAACTTGAGGTTTGG+TGG | 0.402779 | tig0027616:-39369 | None:intergenic |
| GGTGTGGATGTGAGCTTAGA+AGG | 0.404203 | tig0027616:+42491 | Msa1435160:CDS |
| AAAGGAAAGTTGAAAGTTGT+TGG | 0.405100 | tig0027616:+40052 | Msa1435160:CDS |
| GTCTAGGTCATCGGGACCCC+TGG | 0.409158 | tig0027616:-42183 | None:intergenic |
| GATTACATCGCAAAGCAAAA+AGG | 0.410558 | tig0027616:+42284 | Msa1435160:CDS |
| CAAGTATGTTGGAGTGTCTA+TGG | 0.411120 | tig0027616:+40789 | Msa1435160:CDS |
| AAGTAATACTATATATATAT+AGG | 0.415410 | tig0027616:+42785 | Msa1435160:three_prime_UTR |
| ATAATGGGATTTGGAAAAGT+TGG | 0.416575 | tig0027616:+40829 | Msa1435160:CDS |
| ACTGATCAGCCTGGGATGAT+TGG | 0.420709 | tig0027616:+42536 | Msa1435160:CDS |
| GATGATGAAGAAGAGAAGAT+AGG | 0.425266 | tig0027616:-39638 | None:intergenic |
| TTAGTCAAAGCTCTTGATAG+TGG | 0.425387 | tig0027616:+41114 | Msa1435160:CDS |
| GATAGAAGAAAAGGTTTAGA+GGG | 0.425599 | tig0027616:-39514 | None:intergenic |
| ACTTGAGGTTTGGTGGTTGG+TGG | 0.427268 | tig0027616:-39362 | None:intergenic |
| AACCTGTGCTTCTTTGGTGC+TGG | 0.432833 | tig0027616:-41593 | None:intergenic |
| GCAAGGCGTGCAAAAGGATT+AGG | 0.435231 | tig0027616:+40862 | Msa1435160:CDS |
| GTGATTGCCACTCCTCATCT+TGG | 0.435884 | tig0027616:+41568 | Msa1435160:CDS |
| TTCAATATAGATAGAAGAAA+AGG | 0.437478 | tig0027616:-39523 | None:intergenic |
| GATTGCTCTTCTTGCTGCTA+TGG | 0.439120 | tig0027616:+40183 | Msa1435160:CDS |
| CGATGTAATCAGCATTTACA+AGG | 0.440577 | tig0027616:-42271 | None:intergenic |
| ATTGACGGAAAAGTGAAGTA+TGG | 0.441680 | tig0027616:+42437 | Msa1435160:CDS |
| AACAACAGAAACAACGTTGT+TGG | 0.441735 | tig0027616:-39831 | None:intergenic |
| AAGAAAGCGCTTATGGCTAT+TGG | 0.442305 | tig0027616:+42632 | Msa1435160:CDS |
| GCAATTATTTGAAAGGGAAA+AGG | 0.449772 | tig0027616:+43077 | Msa1435160:three_prime_UTR |
| TCCGAGAAACTCGGAGAAGC+AGG | 0.463753 | tig0027616:+39887 | Msa1435160:CDS |
| TTCTCAGCCAGCACAACATA+TGG | 0.465579 | tig0027616:-42086 | None:intergenic |
| TCAACTTGAGGTTTGGTGGT+TGG | 0.467039 | tig0027616:-39365 | None:intergenic |
| ACTAGTGCAATTATTTGAAA+GGG | 0.469056 | tig0027616:+43071 | Msa1435160:three_prime_UTR |
| ATATATATATAGGTATTGAT+TGG | 0.470124 | tig0027616:+42795 | Msa1435160:three_prime_UTR |
| CATCAAAGGATGAATACAAA+TGG | 0.471148 | tig0027616:-43172 | None:intergenic |
| TGGAGCTGTGCCTGCTATTG+AGG | 0.472247 | tig0027616:+42694 | Msa1435160:CDS |
| TATGGCTCGTAATGTTTCTC+AGG | 0.473207 | tig0027616:+40201 | Msa1435160:CDS |
| GAAGAAAAGGTTTAGAGGGA+AGG | 0.473708 | tig0027616:-39510 | None:intergenic |
| AACTAGTGCAATTATTTGAA+AGG | 0.474444 | tig0027616:+43070 | Msa1435160:three_prime_UTR |
| GCTTGAGAAAAGTGATAGCT+TGG | 0.477598 | tig0027616:+42855 | Msa1435160:three_prime_UTR |
| TGTATCTGGATTGACTCAAC+AGG | 0.483012 | tig0027616:-42356 | None:intergenic |
| TTAGCTGTGCAGTTGGTATC+CGG | 0.483277 | tig0027616:+42119 | Msa1435160:CDS |
| AGATTGGATTCCACTTCCTC+CGG | 0.486443 | tig0027616:-42138 | None:intergenic |
| GAAGTGGCAAGGCGTGCAAA+AGG | 0.492552 | tig0027616:+40856 | Msa1435160:CDS |
| AACTGCTGTCAATGCTCCTA+TGG | 0.495186 | tig0027616:+41780 | Msa1435160:CDS |
| AGTGGTTTACCGATCGGCCA+GGG | 0.499241 | tig0027616:+42166 | Msa1435160:CDS |
| AAGAAAAGGTTTAGAGGGAA+GGG | 0.500168 | tig0027616:-39509 | None:intergenic |
| ATGAGCTAGTTCCACTTGGT+TGG | 0.500510 | tig0027616:-43125 | None:intergenic |
| ACTAACTTACTGTCTTTGGC+TGG | 0.501929 | tig0027616:-41532 | None:intergenic |
| TTGAAAGTTGTTGGTAGAGC+TGG | 0.503758 | tig0027616:+40061 | Msa1435160:CDS |
| GCTGTTGTTGGTGCATTGAA+TGG | 0.504053 | tig0027616:+41745 | Msa1435160:CDS |
| GAAATAGCAGAGGCTGTTGT+TGG | 0.504211 | tig0027616:+41733 | Msa1435160:CDS |
| ACAAGACAAGTGTTTGAAGC+AGG | 0.504544 | tig0027616:+40028 | Msa1435160:CDS |
| TGATAGTGGAATTGTTGCTC+AGG | 0.505410 | tig0027616:+41128 | Msa1435160:CDS |
| TGCTCCTATGGTTGCTCCTG+AGG | 0.505857 | tig0027616:+41792 | Msa1435160:CDS |
| ATTGGCTCCATATGTTGTGC+TGG | 0.505952 | tig0027616:+42079 | Msa1435160:CDS |
| AATTGAGTTGGTACAAGAAG+AGG | 0.507359 | tig0027616:-39606 | None:intergenic |
| ACTATTGCTGCTGCTGAACA+TGG | 0.507722 | tig0027616:+40160 | Msa1435160:CDS |
| CAAAAGATCCCACACATGTA+AGG | 0.508676 | tig0027616:-42469 | None:intergenic |
| AAGTCTGGTGTCTAGGTCAT+CGG | 0.511273 | tig0027616:-42192 | None:intergenic |
| AAGTGGTTTACCGATCGGCC+AGG | 0.511493 | tig0027616:+42165 | Msa1435160:CDS |
| CTTCGAGCCATGATCACAAA+AGG | 0.512301 | tig0027616:+42215 | Msa1435160:CDS |
| CAGTTGGTATCCGGAGGAAG+TGG | 0.513484 | tig0027616:+42128 | Msa1435160:CDS |
| CTCGAAGAAGTCTGGTGTCT+AGG | 0.515153 | tig0027616:-42199 | None:intergenic |
| GATCATGGCTCGAAGAAGTC+TGG | 0.515479 | tig0027616:-42207 | None:intergenic |
| AGTCTGGTGTCTAGGTCATC+GGG | 0.515480 | tig0027616:-42191 | None:intergenic |
| TTTAAGACAATTAGGACATG+TGG | 0.518255 | tig0027616:+39919 | Msa1435160:CDS |
| TGCGAATTTGGACTCCACAT+TGG | 0.521056 | tig0027616:-42384 | None:intergenic |
| CTCTATCAGCTGGAGCATAA+GGG | 0.521140 | tig0027616:-40906 | None:intergenic |
| CTCTTTCCTCGCTTATGCGA+AGG | 0.522585 | tig0027616:-42307 | None:intergenic |
| ATTGACTCAACAGGTAGCTC+AGG | 0.525036 | tig0027616:-42347 | None:intergenic |
| TGCAGACAGACTGATCAGCC+TGG | 0.528856 | tig0027616:+42527 | Msa1435160:CDS |
| AACACAAACTCCTCAATAGC+AGG | 0.528948 | tig0027616:-42704 | None:intergenic |
| TTGGTGCTGGCTCCAAGATG+AGG | 0.530869 | tig0027616:-41580 | None:intergenic |
| TGGAATCCAATCTGTAAAAG+TGG | 0.532831 | tig0027616:+42148 | Msa1435160:CDS |
| TTGTTGGTAGAGCTGGTGTT+GGG | 0.537332 | tig0027616:+40068 | Msa1435160:CDS |
| TTTGACTCAATAGGAGGGTG+TGG | 0.537514 | tig0027616:+41705 | Msa1435160:intron |
| AACTTACTGTCTTTGGCTGG+AGG | 0.538388 | tig0027616:-41529 | None:intergenic |
| TTGTTAGTAGTTGGAGTGAG+AGG | 0.541743 | tig0027616:-41003 | None:intergenic |
| ACAGCACGTGCTCTATCAGC+TGG | 0.543522 | tig0027616:-40916 | None:intergenic |
| TGGAAAAGTTGGATCTGAAG+TGG | 0.544222 | tig0027616:+40840 | Msa1435160:CDS |
| AGCCAGCACCAAAGAAGCAC+AGG | 0.545917 | tig0027616:+41591 | Msa1435160:CDS |
| TTTACCTCAGGAGCAACCAT+AGG | 0.548169 | tig0027616:-41796 | None:intergenic |
| GCAAGTGCTGTATCAGAGAC+TGG | 0.549715 | tig0027616:+42404 | Msa1435160:CDS |
| TTCTCGGAGACCAAGATCGT+TGG | 0.552120 | tig0027616:-39872 | None:intergenic |
| ATAGGTAAATAAACCATCAA+AGG | 0.554944 | tig0027616:-43186 | None:intergenic |
| TTATATGAGCTAGTTCCACT+TGG | 0.556440 | tig0027616:-43129 | None:intergenic |
| GAAGAAGAGAAGATAGGTGA+AGG | 0.557348 | tig0027616:-39632 | None:intergenic |
| CATCGGGACCCCTGGCCGAT+CGG | 0.557463 | tig0027616:-42175 | None:intergenic |
| GTTGTTGGTAGAGCTGGTGT+TGG | 0.558071 | tig0027616:+40067 | Msa1435160:CDS |
| GTGTGGATGTGAGCTTAGAA+GGG | 0.562427 | tig0027616:+42492 | Msa1435160:CDS |
| CCGACTTTACCAATCATCCC+AGG | 0.564497 | tig0027616:-42545 | None:intergenic |
| TGCTGGCTGAGAAGCTAGGA+AGG | 0.566544 | tig0027616:+42096 | Msa1435160:CDS |
| GCTGATAGAGCACGTGCTGT+TGG | 0.568204 | tig0027616:+40919 | Msa1435160:CDS |
| ATCTTGGTCTCCGAGAAACT+CGG | 0.570682 | tig0027616:+39878 | Msa1435160:CDS |
| ATGTTGGAGTGTCTATGGTT+GGG | 0.571426 | tig0027616:+40794 | Msa1435160:CDS |
| GGTAATGATTCCAAAAGTGT+TGG | 0.574616 | tig0027616:-39711 | None:intergenic |
| AGGAAGGTTAGCTGTGCAGT+TGG | 0.575316 | tig0027616:+42112 | Msa1435160:CDS |
| CATGATACAAAACTTAGTAC+AGG | 0.575904 | tig0027616:-42946 | None:intergenic |
| TGGCTGAGGAACAAGTATGT+TGG | 0.577015 | tig0027616:+40778 | Msa1435160:CDS |
| AGCTTGAGATCTTCTTGCAT+AGG | 0.577862 | tig0027616:-39970 | None:intergenic |
| ACTGGTCAGATAAGCATTGA+CGG | 0.579892 | tig0027616:+42422 | Msa1435160:CDS |
| CAAGTGTTTGAAGCAGGGAA+AGG | 0.581477 | tig0027616:+40034 | Msa1435160:CDS |
| ATCATCAATGTTGCTAGAGG+TGG | 0.581813 | tig0027616:+41072 | Msa1435160:CDS |
| AGGTGAAGGAAGAATTGAGT+TGG | 0.583715 | tig0027616:-39618 | None:intergenic |
| TATGTTGGAGTGTCTATGGT+TGG | 0.584348 | tig0027616:+40793 | Msa1435160:CDS |
| TGTAAAAGTGGTTTACCGAT+CGG | 0.589128 | tig0027616:+42160 | Msa1435160:CDS |
| GCTGATGCTTCCCTTAAAGC+CGG | 0.593057 | tig0027616:+40223 | Msa1435160:CDS |
| CCTGGGATGATTGGTAAAGT+CGG | 0.595667 | tig0027616:+42545 | Msa1435160:CDS |
| ATAGCTTGGTTATGAAGTAA+TGG | 0.595931 | tig0027616:+42869 | Msa1435160:three_prime_UTR |
| GCAGCAATAGTATTAGCAGT+AGG | 0.600020 | tig0027616:-40148 | None:intergenic |
| ACACCACACCTTACATGTGT+GGG | 0.601870 | tig0027616:+42461 | Msa1435160:CDS |
| TTATTTGAAAGGGAAAAGGT+AGG | 0.602025 | tig0027616:+43081 | Msa1435160:three_prime_UTR |
| TACACCACACCTTACATGTG+TGG | 0.602905 | tig0027616:+42460 | Msa1435160:CDS |
| CTATTGCTGCTGCTGAACAT+GGG | 0.618691 | tig0027616:+40161 | Msa1435160:CDS |
| CAAGACAAGTGTTTGAAGCA+GGG | 0.623927 | tig0027616:+40029 | Msa1435160:CDS |
| TGGTGTTGGGATTGATAATG+TGG | 0.634025 | tig0027616:+40081 | Msa1435160:CDS |
| GTTGTGCTGGCTGAGAAGCT+AGG | 0.640220 | tig0027616:+42092 | Msa1435160:CDS |
| AATGTGATGCACCAACCAAG+TGG | 0.640895 | tig0027616:+43114 | Msa1435160:three_prime_UTR |
| CATAAGCGAGGAAAGAGTAG+TGG | 0.646950 | tig0027616:+42313 | Msa1435160:CDS |
| AAGTTGGATCTGAAGTGGCA+AGG | 0.647081 | tig0027616:+40845 | Msa1435160:CDS |
| CCAGATACAAATATCCAATG+TGG | 0.650082 | tig0027616:+42370 | Msa1435160:CDS |
| GCAGACAGACTGATCAGCCT+GGG | 0.652171 | tig0027616:+42528 | Msa1435160:CDS |
| GTGGTTTACCGATCGGCCAG+GGG | 0.652751 | tig0027616:+42167 | Msa1435160:CDS |
| AAAAGGCCTTCGCATAAGCG+AGG | 0.668434 | tig0027616:+42301 | Msa1435160:CDS |
| GATCCCACACATGTAAGGTG+TGG | 0.673309 | tig0027616:-42464 | None:intergenic |
| ATAATTAAGGAGTTGATGTG+CGG | 0.675532 | tig0027616:-39406 | None:intergenic |
| GCGTCGGAAGAACATCGCGT+AGG | 0.678508 | tig0027616:+42609 | Msa1435160:CDS |
| AATGTGAGCTTTATGAGCGT+CGG | 0.682198 | tig0027616:+42593 | Msa1435160:CDS |
| GCTGTGCAGTTGGTATCCGG+AGG | 0.685286 | tig0027616:+42122 | Msa1435160:CDS |
| TGTGGCTATTGAAATAGCAG+AGG | 0.685958 | tig0027616:+41723 | Msa1435160:CDS |
| AGAATCATCAATGTTGCTAG+AGG | 0.702837 | tig0027616:+41069 | Msa1435160:CDS |
| GATGCTTTGATTGTGAGAAG+CGG | 0.715751 | tig0027616:+39995 | Msa1435160:CDS |
| GCTGGCTCCAAGATGAGGAG+TGG | 0.717165 | tig0027616:-41575 | None:intergenic |
| AGCTCTTGATGTGTTCACTG+AGG | 0.735803 | tig0027616:+41504 | Msa1435160:CDS |
| GTGAAGTGAGATGAAATCAG+CGG | 0.758782 | tig0027616:-40977 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGTAATACTATATATATAT+AGG | + | tig0027616:42785-42804 | Msa1435160:three_prime_UTR | 10.0% |
| !! | ATATAGTTTAATAGTATTAG+TGG | + | tig0027616:40317-40336 | Msa1435160:intron | 15.0% |
| !!! | AGGTTAGTTTTTAATTTATA+CGG | + | tig0027616:40389-40408 | Msa1435160:intron | 15.0% |
| !!! | TCTTGTTTGAAATATATTTA+AGG | + | tig0027616:40555-40574 | Msa1435160:intron | 15.0% |
| !!! | ATATATATATAGGTATTGAT+TGG | + | tig0027616:42795-42814 | Msa1435160:three_prime_UTR | 15.0% |
| !! | ATCAACTCCTTAATTATTAT+TGG | + | tig0027616:39412-39431 | Msa1435160:five_prime_UTR | 20.0% |
| !! | ACAGAAACCAATAATAATTA+AGG | - | tig0027616:39422-39441 | None:intergenic | 20.0% |
| !!! | TATTGGTTTCTGTTATATAT+AGG | + | tig0027616:39429-39448 | Msa1435160:five_prime_UTR | 20.0% |
| !!! | AAATTTTGAATTGTGATTTG+AGG | - | tig0027616:39475-39494 | None:intergenic | 20.0% |
| !! | TTCAATATAGATAGAAGAAA+AGG | - | tig0027616:39526-39545 | None:intergenic | 20.0% |
| !!! | TTACAAGTTTTAAGACAATT+AGG | + | tig0027616:39911-39930 | Msa1435160:CDS | 20.0% |
| !!! | TACACAAAAAGTACATTTTT+AGG | + | tig0027616:40639-40658 | Msa1435160:intron | 20.0% |
| !! | TGTAAAAACACACATATTAT+AGG | - | tig0027616:40704-40723 | None:intergenic | 20.0% |
| !! | AAAATAGTAATGGTAATTCA+AGG | - | tig0027616:41272-41291 | None:intergenic | 20.0% |
| !!! | TTGAATTACCATTACTATTT+TGG | + | tig0027616:41271-41290 | Msa1435160:intron | 20.0% |
| !!! | AAATAGAAATGTCATTTGAA+TGG | - | tig0027616:41464-41483 | None:intergenic | 20.0% |
| !!! | ATTTCTATTTTGTTTGAATG+TGG | + | tig0027616:41474-41493 | Msa1435160:intron | 20.0% |
| !! | AATTGATGAGAAAAAAAACT+TGG | - | tig0027616:41686-41705 | None:intergenic | 20.0% |
| !! | CATTAAACATAGTAGATTAT+AGG | - | tig0027616:43207-43226 | None:intergenic | 20.0% |
| !!! | ATTAGAGGATTTTGAAGATT+TGG | - | tig0027616:39675-39694 | None:intergenic | 25.0% |
| !!! | TTTGAGTTGTTTGTTTTGTT+TGG | - | tig0027616:39811-39830 | None:intergenic | 25.0% |
| ! | TAACGACAAATGTTAGTAAT+TGG | + | tig0027616:40361-40380 | Msa1435160:intron | 25.0% |
| ! | AATGTTAGTAATTGGTTGTT+AGG | + | tig0027616:40369-40388 | Msa1435160:intron | 25.0% |
| !!! | CAAAGTTTTAAATTGCAGTT+GGG | + | tig0027616:40502-40521 | Msa1435160:intron | 25.0% |
| !! | TGATAATTTTTGCAGGAAAA+TGG | + | tig0027616:40758-40777 | Msa1435160:intron | 25.0% |
| ! | TTGAAAACTTTGTTAGTAGT+TGG | - | tig0027616:41015-41034 | None:intergenic | 25.0% |
| ! | AACATGTTAATTGAAGTAAG+AGG | - | tig0027616:41159-41178 | None:intergenic | 25.0% |
| ! | GATAGTATAATAGCAATTCA+AGG | - | tig0027616:41182-41201 | None:intergenic | 25.0% |
| ! | GAAAATTATGTGAGCTAAAA+GGG | - | tig0027616:41660-41679 | None:intergenic | 25.0% |
| ! | AGAAAATTATGTGAGCTAAA+AGG | - | tig0027616:41661-41680 | None:intergenic | 25.0% |
| !! | AAAGCATAGTTTAATTTCCA+TGG | - | tig0027616:41880-41899 | None:intergenic | 25.0% |
| ! | ATGGAAATTAAACTATGCTT+TGG | + | tig0027616:41879-41898 | Msa1435160:intron | 25.0% |
| ! | TGGAAATTAAACTATGCTTT+GGG | + | tig0027616:41880-41899 | Msa1435160:intron | 25.0% |
| !! | ATTAGAACTAGTTTAGACAT+AGG | + | tig0027616:41947-41966 | Msa1435160:intron | 25.0% |
| ! | TTGACAATTGTGTTTGATAT+TGG | - | tig0027616:42251-42270 | None:intergenic | 25.0% |
| ! | AACTAGTGCAATTATTTGAA+AGG | + | tig0027616:43070-43089 | Msa1435160:three_prime_UTR | 25.0% |
| ! | ACTAGTGCAATTATTTGAAA+GGG | + | tig0027616:43071-43090 | Msa1435160:three_prime_UTR | 25.0% |
| ! | ATAGGTAAATAAACCATCAA+AGG | - | tig0027616:43189-43208 | None:intergenic | 25.0% |
| ! | TTTTTCTTCAACTTGAGGTT+TGG | - | tig0027616:39375-39394 | None:intergenic | 30.0% |
| ! | AGAGATTTTTCTTCAACTTG+AGG | - | tig0027616:39380-39399 | None:intergenic | 30.0% |
| !! | ATAATTAAGGAGTTGATGTG+CGG | - | tig0027616:39409-39428 | None:intergenic | 30.0% |
| GATAGAAGAAAAGGTTTAGA+GGG | - | tig0027616:39517-39536 | None:intergenic | 30.0% | |
| AGATAGAAGAAAAGGTTTAG+AGG | - | tig0027616:39518-39537 | None:intergenic | 30.0% | |
| ATGAGAGAGTTTAATGTTGT+TGG | - | tig0027616:39735-39754 | None:intergenic | 30.0% | |
| !!! | TGTTTGTTTTGTTTGGTCAA+CGG | - | tig0027616:39804-39823 | None:intergenic | 30.0% |
| AAATGAAAAACCAACGATCT+TGG | + | tig0027616:39862-39881 | Msa1435160:CDS | 30.0% | |
| ! | TTTAAGACAATTAGGACATG+TGG | + | tig0027616:39919-39938 | Msa1435160:CDS | 30.0% |
| AAAGGAAAGTTGAAAGTTGT+TGG | + | tig0027616:40052-40071 | Msa1435160:CDS | 30.0% | |
| ! | CCAACTGCAATTTAAAACTT+TGG | - | tig0027616:40504-40523 | None:intergenic | 30.0% |
| !!! | CCAAAGTTTTAAATTGCAGT+TGG | + | tig0027616:40501-40520 | Msa1435160:intron | 30.0% |
| ! | ACTACTATGAGTATTTGTTG+AGG | + | tig0027616:40723-40742 | Msa1435160:intron | 30.0% |
| !!! | GAGATGTTGATAATTTTTGC+AGG | + | tig0027616:40751-40770 | Msa1435160:intron | 30.0% |
| TGGGAAAACATTAGCAATAA+TGG | + | tig0027616:40813-40832 | Msa1435160:CDS | 30.0% | |
| GGGAAAACATTAGCAATAAT+GGG | + | tig0027616:40814-40833 | Msa1435160:CDS | 30.0% | |
| ! | ACATTAGCAATAATGGGATT+TGG | + | tig0027616:40820-40839 | Msa1435160:CDS | 30.0% |
| ! | ATAATGGGATTTGGAAAAGT+TGG | + | tig0027616:40829-40848 | Msa1435160:CDS | 30.0% |
| ! | TACTTTTGCTAAGATGAAGA+AGG | + | tig0027616:41041-41060 | Msa1435160:CDS | 30.0% |
| ! | ACTTTTGCTAAGATGAAGAA+GGG | + | tig0027616:41042-41061 | Msa1435160:CDS | 30.0% |
| TCAAGGAACATGTAAACTAT+AGG | - | tig0027616:41255-41274 | None:intergenic | 30.0% | |
| TGCGATTTCCAAAATAGTAA+TGG | - | tig0027616:41282-41301 | None:intergenic | 30.0% | |
| GAAGAAGAAAAAATGCAAGT+AGG | - | tig0027616:41635-41654 | None:intergenic | 30.0% | |
| !!! | CTCATCAATTTTGACTCAAT+AGG | + | tig0027616:41696-41715 | Msa1435160:intron | 30.0% |
| !!! | ATCAATTTTGACTCAATAGG+AGG | + | tig0027616:41699-41718 | Msa1435160:intron | 30.0% |
| !!! | TCAATTTTGACTCAATAGGA+GGG | + | tig0027616:41700-41719 | Msa1435160:intron | 30.0% |
| AGCATACTAATGTTACAATG+TGG | - | tig0027616:41829-41848 | None:intergenic | 30.0% | |
| AAGCAAAAAAAGAACAATGC+AGG | - | tig0027616:42009-42028 | None:intergenic | 30.0% | |
| TAATTGTTTGCAATTTCACC+AGG | + | tig0027616:42046-42065 | Msa1435160:intron | 30.0% | |
| ! | AATAATGCCTTTTGTGATCA+TGG | - | tig0027616:42225-42244 | None:intergenic | 30.0% |
| ATAGCTTGGTTATGAAGTAA+TGG | + | tig0027616:42869-42888 | Msa1435160:three_prime_UTR | 30.0% | |
| CATGATACAAAACTTAGTAC+AGG | - | tig0027616:42949-42968 | None:intergenic | 30.0% | |
| !! | CTGTACTAAGTTTTGTATCA+TGG | + | tig0027616:42947-42966 | Msa1435160:three_prime_UTR | 30.0% |
| GCAATTATTTGAAAGGGAAA+AGG | + | tig0027616:43077-43096 | Msa1435160:three_prime_UTR | 30.0% | |
| TTATTTGAAAGGGAAAAGGT+AGG | + | tig0027616:43081-43100 | Msa1435160:three_prime_UTR | 30.0% | |
| CATCAAAGGATGAATACAAA+TGG | - | tig0027616:43175-43194 | None:intergenic | 30.0% | |
| CATTTGTATTCATCCTTTGA+TGG | + | tig0027616:43173-43192 | Msa1435160:three_prime_UTR | 30.0% | |
| AAGAAAAGGTTTAGAGGGAA+GGG | - | tig0027616:39512-39531 | None:intergenic | 35.0% | |
| !! | AATTGAGTTGGTACAAGAAG+AGG | - | tig0027616:39609-39628 | None:intergenic | 35.0% |
| GATGATGAAGAAGAGAAGAT+AGG | - | tig0027616:39641-39660 | None:intergenic | 35.0% | |
| GTTAAGGAATGAGAGATTAG+AGG | - | tig0027616:39690-39709 | None:intergenic | 35.0% | |
| ! | TTCCTTAACTCCAACACTTT+TGG | + | tig0027616:39701-39720 | Msa1435160:CDS | 35.0% |
| !! | TTCCAAAAGTGTTGGAGTTA+AGG | - | tig0027616:39706-39725 | None:intergenic | 35.0% |
| ! | GGTAATGATTCCAAAAGTGT+TGG | - | tig0027616:39714-39733 | None:intergenic | 35.0% |
| AACAACAGAAACAACGTTGT+TGG | - | tig0027616:39834-39853 | None:intergenic | 35.0% | |
| ATCATGAACATGTACCATAC+CGG | - | tig0027616:40245-40264 | None:intergenic | 35.0% | |
| GATTGACGTATATTCAACGT+TGG | + | tig0027616:40433-40452 | Msa1435160:intron | 35.0% | |
| TTCAAACAAGAGATCTAGCA+AGG | - | tig0027616:40546-40565 | None:intergenic | 35.0% | |
| AGAATCATCAATGTTGCTAG+AGG | + | tig0027616:41069-41088 | Msa1435160:CDS | 35.0% | |
| TTAGTCAAAGCTCTTGATAG+TGG | + | tig0027616:41114-41133 | Msa1435160:CDS | 35.0% | |
| GATCAACACAATTCAGTGAA+TGG | - | tig0027616:41421-41440 | None:intergenic | 35.0% | |
| !! | ATTTTGTTTGAATGTGGAGC+AGG | + | tig0027616:41480-41499 | Msa1435160:intron | 35.0% |
| TTGCACTAACTTACTGTCTT+TGG | - | tig0027616:41539-41558 | None:intergenic | 35.0% | |
| AAAACAAACCTGTGCTTCTT+TGG | - | tig0027616:41602-41621 | None:intergenic | 35.0% | |
| !!! | TGTGGTTGTTTTTTTACCTC+AGG | - | tig0027616:41811-41830 | None:intergenic | 35.0% |
| ! | GCATAGTTTAATTTCCATGG+AGG | - | tig0027616:41877-41896 | None:intergenic | 35.0% |
| AGTTTAGACATAGGTCACAT+TGG | + | tig0027616:41956-41975 | Msa1435160:intron | 35.0% | |
| TCACCAGGTATTATCAGAAT+TGG | + | tig0027616:42061-42080 | Msa1435160:intron | 35.0% | |
| TGGAATCCAATCTGTAAAAG+TGG | + | tig0027616:42148-42167 | Msa1435160:CDS | 35.0% | |
| !! | GGTAAACCACTTTTACAGAT+TGG | - | tig0027616:42157-42176 | None:intergenic | 35.0% |
| TGTAAAAGTGGTTTACCGAT+CGG | + | tig0027616:42160-42179 | Msa1435160:CDS | 35.0% | |
| CGATGTAATCAGCATTTACA+AGG | - | tig0027616:42274-42293 | None:intergenic | 35.0% | |
| GATTACATCGCAAAGCAAAA+AGG | + | tig0027616:42284-42303 | Msa1435160:CDS | 35.0% | |
| CCACATTGGATATTTGTATC+TGG | - | tig0027616:42373-42392 | None:intergenic | 35.0% | |
| CCAGATACAAATATCCAATG+TGG | + | tig0027616:42370-42389 | Msa1435160:CDS | 35.0% | |
| ATTGACGGAAAAGTGAAGTA+TGG | + | tig0027616:42437-42456 | Msa1435160:CDS | 35.0% | |
| GGTAAAGTCGGAAACATATT+AGG | + | tig0027616:42557-42576 | Msa1435160:CDS | 35.0% | |
| TTCTCAAGAGCTTCCTTATT+TGG | - | tig0027616:42671-42690 | None:intergenic | 35.0% | |
| AAGGAAGCTCTTGAGAATAT+TGG | + | tig0027616:42674-42693 | Msa1435160:CDS | 35.0% | |
| TTATATGAGCTAGTTCCACT+TGG | - | tig0027616:43132-43151 | None:intergenic | 35.0% | |
| TTCTTCAACTTGAGGTTTGG+TGG | - | tig0027616:39372-39391 | None:intergenic | 40.0% | |
| GAAGAAAAGGTTTAGAGGGA+AGG | - | tig0027616:39513-39532 | None:intergenic | 40.0% | |
| AGGTGAAGGAAGAATTGAGT+TGG | - | tig0027616:39621-39640 | None:intergenic | 40.0% | |
| GAAGAAGAGAAGATAGGTGA+AGG | - | tig0027616:39635-39654 | None:intergenic | 40.0% | |
| !! | CTCTCAACAACGTTGTTTTG+TGG | + | tig0027616:39760-39779 | Msa1435160:CDS | 40.0% |
| ATCTTCTTGCATAGGTCTTC+TGG | - | tig0027616:39965-39984 | None:intergenic | 40.0% | |
| AGCTTGAGATCTTCTTGCAT+AGG | - | tig0027616:39973-39992 | None:intergenic | 40.0% | |
| GATGCTTTGATTGTGAGAAG+CGG | + | tig0027616:39995-40014 | Msa1435160:CDS | 40.0% | |
| ! | ACAAGACAAGTGTTTGAAGC+AGG | + | tig0027616:40028-40047 | Msa1435160:CDS | 40.0% |
| ! | CAAGACAAGTGTTTGAAGCA+GGG | + | tig0027616:40029-40048 | Msa1435160:CDS | 40.0% |
| ! | TTGAAAGTTGTTGGTAGAGC+TGG | + | tig0027616:40061-40080 | Msa1435160:CDS | 40.0% |
| !! | TGGTGTTGGGATTGATAATG+TGG | + | tig0027616:40081-40100 | Msa1435160:CDS | 40.0% |
| CTACAAGCTGCTACTGAATT+TGG | + | tig0027616:40106-40125 | Msa1435160:CDS | 40.0% | |
| GCAGCAATAGTATTAGCAGT+AGG | - | tig0027616:40151-40170 | None:intergenic | 40.0% | |
| TATGGCTCGTAATGTTTCTC+AGG | + | tig0027616:40201-40220 | Msa1435160:CDS | 40.0% | |
| !! | ATGTACCATACCGGCTTTAA+GGG | - | tig0027616:40236-40255 | None:intergenic | 40.0% |
| ! | TTTTTGCAGGAAAATGGCTG+AGG | + | tig0027616:40764-40783 | Msa1435160:intron | 40.0% |
| ! | CAAGTATGTTGGAGTGTCTA+TGG | + | tig0027616:40789-40808 | Msa1435160:CDS | 40.0% |
| ! | TATGTTGGAGTGTCTATGGT+TGG | + | tig0027616:40793-40812 | Msa1435160:CDS | 40.0% |
| ! | ATGTTGGAGTGTCTATGGTT+GGG | + | tig0027616:40794-40813 | Msa1435160:CDS | 40.0% |
| TGGAAAAGTTGGATCTGAAG+TGG | + | tig0027616:40840-40859 | Msa1435160:CDS | 40.0% | |
| GTGAAGTGAGATGAAATCAG+CGG | - | tig0027616:40980-40999 | None:intergenic | 40.0% | |
| TTGTTAGTAGTTGGAGTGAG+AGG | - | tig0027616:41006-41025 | None:intergenic | 40.0% | |
| ATCATCAATGTTGCTAGAGG+TGG | + | tig0027616:41072-41091 | Msa1435160:CDS | 40.0% | |
| !! | TGATAGTGGAATTGTTGCTC+AGG | + | tig0027616:41128-41147 | Msa1435160:CDS | 40.0% |
| CTAGCAATGTTCAACTCGTT+TGG | + | tig0027616:41208-41227 | Msa1435160:intron | 40.0% | |
| TTCAACTCGTTTGGAAATCG+TGG | + | tig0027616:41217-41236 | Msa1435160:intron | 40.0% | |
| TGGAAATCGCAATTGCATAG+TGG | + | tig0027616:41291-41310 | Msa1435160:intron | 40.0% | |
| ACTAACTTACTGTCTTTGGC+TGG | - | tig0027616:41535-41554 | None:intergenic | 40.0% | |
| TGTGGCTATTGAAATAGCAG+AGG | + | tig0027616:41723-41742 | Msa1435160:CDS | 40.0% | |
| GAGCCAATTCTGATAATACC+TGG | - | tig0027616:42067-42086 | None:intergenic | 40.0% | |
| ! | TGTATCTGGATTGACTCAAC+AGG | - | tig0027616:42359-42378 | None:intergenic | 40.0% |
| TGATACAGCACTTGCGAATT+TGG | - | tig0027616:42399-42418 | None:intergenic | 40.0% | |
| !! | ACTGGTCAGATAAGCATTGA+CGG | + | tig0027616:42422-42441 | Msa1435160:CDS | 40.0% |
| CAAAAGATCCCACACATGTA+AGG | - | tig0027616:42472-42491 | None:intergenic | 40.0% | |
| ! | CTTACATGTGTGGGATCTTT+TGG | + | tig0027616:42470-42489 | Msa1435160:CDS | 40.0% |
| ! | AATGTGAGCTTTATGAGCGT+CGG | + | tig0027616:42593-42612 | Msa1435160:CDS | 40.0% |
| !! | AAGAAAGCGCTTATGGCTAT+TGG | + | tig0027616:42632-42651 | Msa1435160:CDS | 40.0% |
| AACACAAACTCCTCAATAGC+AGG | - | tig0027616:42707-42726 | None:intergenic | 40.0% | |
| GCTTGAGAAAAGTGATAGCT+TGG | + | tig0027616:42855-42874 | Msa1435160:three_prime_UTR | 40.0% | |
| !! | TCAACTTGAGGTTTGGTGGT+TGG | - | tig0027616:39368-39387 | None:intergenic | 45.0% |
| ATCTTGGTCTCCGAGAAACT+CGG | + | tig0027616:39878-39897 | Msa1435160:CDS | 45.0% | |
| ! | CAAGTGTTTGAAGCAGGGAA+AGG | + | tig0027616:40034-40053 | Msa1435160:CDS | 45.0% |
| ! | TTGTTGGTAGAGCTGGTGTT+GGG | + | tig0027616:40068-40087 | Msa1435160:CDS | 45.0% |
| ACTATTGCTGCTGCTGAACA+TGG | + | tig0027616:40160-40179 | Msa1435160:CDS | 45.0% | |
| CTATTGCTGCTGCTGAACAT+GGG | + | tig0027616:40161-40180 | Msa1435160:CDS | 45.0% | |
| GATTGCTCTTCTTGCTGCTA+TGG | + | tig0027616:40183-40202 | Msa1435160:CDS | 45.0% | |
| !! | CATGTACCATACCGGCTTTA+AGG | - | tig0027616:40237-40256 | None:intergenic | 45.0% |
| TGGCTGAGGAACAAGTATGT+TGG | + | tig0027616:40778-40797 | Msa1435160:CDS | 45.0% | |
| ! | AAGTTGGATCTGAAGTGGCA+AGG | + | tig0027616:40845-40864 | Msa1435160:CDS | 45.0% |
| CTCTATCAGCTGGAGCATAA+GGG | - | tig0027616:40909-40928 | None:intergenic | 45.0% | |
| CACGAAGTCGCGATTAACAA+TGG | + | tig0027616:41349-41368 | Msa1435160:intron | 45.0% | |
| AGCTCTTGATGTGTTCACTG+AGG | + | tig0027616:41504-41523 | Msa1435160:CDS | 45.0% | |
| AACTTACTGTCTTTGGCTGG+AGG | - | tig0027616:41532-41551 | None:intergenic | 45.0% | |
| TTTGACTCAATAGGAGGGTG+TGG | + | tig0027616:41705-41724 | Msa1435160:intron | 45.0% | |
| GAAATAGCAGAGGCTGTTGT+TGG | + | tig0027616:41733-41752 | Msa1435160:CDS | 45.0% | |
| GCTGTTGTTGGTGCATTGAA+TGG | + | tig0027616:41745-41764 | Msa1435160:CDS | 45.0% | |
| AACTGCTGTCAATGCTCCTA+TGG | + | tig0027616:41780-41799 | Msa1435160:CDS | 45.0% | |
| TTTACCTCAGGAGCAACCAT+AGG | - | tig0027616:41799-41818 | None:intergenic | 45.0% | |
| ATTTCCATGGAGGCTGACTA+TGG | - | tig0027616:41867-41886 | None:intergenic | 45.0% | |
| ! | ATTGGCTCCATATGTTGTGC+TGG | + | tig0027616:42079-42098 | Msa1435160:CDS | 45.0% |
| TTCTCAGCCAGCACAACATA+TGG | - | tig0027616:42089-42108 | None:intergenic | 45.0% | |
| ! | TTAGCTGTGCAGTTGGTATC+CGG | + | tig0027616:42119-42138 | Msa1435160:CDS | 45.0% |
| AGATTGGATTCCACTTCCTC+CGG | - | tig0027616:42141-42160 | None:intergenic | 45.0% | |
| AAGTCTGGTGTCTAGGTCAT+CGG | - | tig0027616:42195-42214 | None:intergenic | 45.0% | |
| CTTCGAGCCATGATCACAAA+AGG | + | tig0027616:42215-42234 | Msa1435160:CDS | 45.0% | |
| CATAAGCGAGGAAAGAGTAG+TGG | + | tig0027616:42313-42332 | Msa1435160:CDS | 45.0% | |
| ! | ATTGACTCAACAGGTAGCTC+AGG | - | tig0027616:42350-42369 | None:intergenic | 45.0% |
| TGCGAATTTGGACTCCACAT+TGG | - | tig0027616:42387-42406 | None:intergenic | 45.0% | |
| TACACCACACCTTACATGTG+TGG | + | tig0027616:42460-42479 | Msa1435160:CDS | 45.0% | |
| ACACCACACCTTACATGTGT+GGG | + | tig0027616:42461-42480 | Msa1435160:CDS | 45.0% | |
| ! | ATGTGTGGGATCTTTTGGTG+TGG | + | tig0027616:42475-42494 | Msa1435160:CDS | 45.0% |
| GTGTGGATGTGAGCTTAGAA+GGG | + | tig0027616:42492-42511 | Msa1435160:CDS | 45.0% | |
| CCTGGGATGATTGGTAAAGT+CGG | + | tig0027616:42545-42564 | Msa1435160:CDS | 45.0% | |
| CGTCGATGAAGAGCCAAATA+AGG | + | tig0027616:42655-42674 | Msa1435160:CDS | 45.0% | |
| AATGTGATGCACCAACCAAG+TGG | + | tig0027616:43114-43133 | Msa1435160:three_prime_UTR | 45.0% | |
| ATGAGCTAGTTCCACTTGGT+TGG | - | tig0027616:43128-43147 | None:intergenic | 45.0% | |
| !! | ACTTGAGGTTTGGTGGTTGG+TGG | - | tig0027616:39365-39384 | None:intergenic | 50.0% |
| TTCTCGGAGACCAAGATCGT+TGG | - | tig0027616:39875-39894 | None:intergenic | 50.0% | |
| ! | GTTGTTGGTAGAGCTGGTGT+TGG | + | tig0027616:40067-40086 | Msa1435160:CDS | 50.0% |
| GCTGATGCTTCCCTTAAAGC+CGG | + | tig0027616:40223-40242 | Msa1435160:CDS | 50.0% | |
| TGCTTCCCTTAAAGCCGGTA+TGG | + | tig0027616:40228-40247 | Msa1435160:intron | 50.0% | |
| GCAAGGCGTGCAAAAGGATT+AGG | + | tig0027616:40862-40881 | Msa1435160:CDS | 50.0% | |
| GCTCTATCAGCTGGAGCATA+AGG | - | tig0027616:40910-40929 | None:intergenic | 50.0% | |
| GTGATTGCCACTCCTCATCT+TGG | + | tig0027616:41568-41587 | Msa1435160:CDS | 50.0% | |
| ! | AACCTGTGCTTCTTTGGTGC+TGG | - | tig0027616:41596-41615 | None:intergenic | 50.0% |
| AAGACCATAGTCAGCCTCCA+TGG | + | tig0027616:41860-41879 | Msa1435160:intron | 50.0% | |
| ! | AGGAAGGTTAGCTGTGCAGT+TGG | + | tig0027616:42112-42131 | Msa1435160:CDS | 50.0% |
| AGTCTGGTGTCTAGGTCATC+GGG | - | tig0027616:42194-42213 | None:intergenic | 50.0% | |
| CTCGAAGAAGTCTGGTGTCT+AGG | - | tig0027616:42202-42221 | None:intergenic | 50.0% | |
| GATCATGGCTCGAAGAAGTC+TGG | - | tig0027616:42210-42229 | None:intergenic | 50.0% | |
| AAAAGGCCTTCGCATAAGCG+AGG | + | tig0027616:42301-42320 | Msa1435160:CDS | 50.0% | |
| CTCTTTCCTCGCTTATGCGA+AGG | - | tig0027616:42310-42329 | None:intergenic | 50.0% | |
| ! | GCAAGTGCTGTATCAGAGAC+TGG | + | tig0027616:42404-42423 | Msa1435160:CDS | 50.0% |
| GATCCCACACATGTAAGGTG+TGG | - | tig0027616:42467-42486 | None:intergenic | 50.0% | |
| GGTGTGGATGTGAGCTTAGA+AGG | + | tig0027616:42491-42510 | Msa1435160:CDS | 50.0% | |
| ACTGATCAGCCTGGGATGAT+TGG | + | tig0027616:42536-42555 | Msa1435160:CDS | 50.0% | |
| CCGACTTTACCAATCATCCC+AGG | - | tig0027616:42548-42567 | None:intergenic | 50.0% | |
| !! | GCGTAGGAAGAAAGCGCTTA+TGG | + | tig0027616:42625-42644 | Msa1435160:CDS | 50.0% |
| !! | TGAGGTTTGGTGGTTGGTGG+AGG | - | tig0027616:39362-39381 | None:intergenic | 55.0% |
| TCCGAGAAACTCGGAGAAGC+AGG | + | tig0027616:39887-39906 | Msa1435160:CDS | 55.0% | |
| GCCTGCTTCTCCGAGTTTCT+CGG | - | tig0027616:39891-39910 | None:intergenic | 55.0% | |
| GAAGTGGCAAGGCGTGCAAA+AGG | + | tig0027616:40856-40875 | Msa1435160:CDS | 55.0% | |
| ACAGCACGTGCTCTATCAGC+TGG | - | tig0027616:40919-40938 | None:intergenic | 55.0% | |
| GCTGATAGAGCACGTGCTGT+TGG | + | tig0027616:40919-40938 | Msa1435160:CDS | 55.0% | |
| !! | TTGGTGCTGGCTCCAAGATG+AGG | - | tig0027616:41583-41602 | None:intergenic | 55.0% |
| ! | AGCCAGCACCAAAGAAGCAC+AGG | + | tig0027616:41591-41610 | Msa1435160:CDS | 55.0% |
| TGCTCCTATGGTTGCTCCTG+AGG | + | tig0027616:41792-41811 | Msa1435160:CDS | 55.0% | |
| !! | GTTGTGCTGGCTGAGAAGCT+AGG | + | tig0027616:42092-42111 | Msa1435160:CDS | 55.0% |
| ! | TGCTGGCTGAGAAGCTAGGA+AGG | + | tig0027616:42096-42115 | Msa1435160:CDS | 55.0% |
| ! | CAGTTGGTATCCGGAGGAAG+TGG | + | tig0027616:42128-42147 | Msa1435160:CDS | 55.0% |
| AAGTGGTTTACCGATCGGCC+AGG | + | tig0027616:42165-42184 | Msa1435160:CDS | 55.0% | |
| AGTGGTTTACCGATCGGCCA+GGG | + | tig0027616:42166-42185 | Msa1435160:CDS | 55.0% | |
| TGCAGACAGACTGATCAGCC+TGG | + | tig0027616:42527-42546 | Msa1435160:CDS | 55.0% | |
| GCAGACAGACTGATCAGCCT+GGG | + | tig0027616:42528-42547 | Msa1435160:CDS | 55.0% | |
| TGGAGCTGTGCCTGCTATTG+AGG | + | tig0027616:42694-42713 | Msa1435160:CDS | 55.0% | |
| ! | GCTGGCTCCAAGATGAGGAG+TGG | - | tig0027616:41578-41597 | None:intergenic | 60.0% |
| ! | GCTGTGCAGTTGGTATCCGG+AGG | + | tig0027616:42122-42141 | Msa1435160:CDS | 60.0% |
| GTGGTTTACCGATCGGCCAG+GGG | + | tig0027616:42167-42186 | Msa1435160:CDS | 60.0% | |
| GCGTCGGAAGAACATCGCGT+AGG | + | tig0027616:42609-42628 | Msa1435160:CDS | 60.0% | |
| GTCTAGGTCATCGGGACCCC+TGG | - | tig0027616:42186-42205 | None:intergenic | 65.0% | |
| CATCGGGACCCCTGGCCGAT+CGG | - | tig0027616:42178-42197 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0027616 | gene | 39352 | 43250 | 39352 | ID=Msa1435160;Name=Msa1435160 |
| tig0027616 | mRNA | 39352 | 43250 | 39352 | ID=Msa1435160-mRNA-1;Parent=Msa1435160;Name=Msa1435160-mRNA-1;_AED=0.03;_eAED=0.03;_QI=247|1|1|1|1|1|5|511|633 |
| tig0027616 | exon | 39352 | 40244 | 39352 | ID=Msa1435160-mRNA-1:exon:9515;Parent=Msa1435160-mRNA-1 |
| tig0027616 | exon | 40773 | 41149 | 40773 | ID=Msa1435160-mRNA-1:exon:9516;Parent=Msa1435160-mRNA-1 |
| tig0027616 | exon | 41502 | 41612 | 41502 | ID=Msa1435160-mRNA-1:exon:9517;Parent=Msa1435160-mRNA-1 |
| tig0027616 | exon | 41718 | 41813 | 41718 | ID=Msa1435160-mRNA-1:exon:9518;Parent=Msa1435160-mRNA-1 |
| tig0027616 | exon | 42068 | 43250 | 42068 | ID=Msa1435160-mRNA-1:exon:9519;Parent=Msa1435160-mRNA-1 |
| tig0027616 | five_prime_UTR | 39352 | 39598 | 39352 | ID=Msa1435160-mRNA-1:five_prime_utr;Parent=Msa1435160-mRNA-1 |
| tig0027616 | CDS | 39599 | 40244 | 39599 | ID=Msa1435160-mRNA-1:cds;Parent=Msa1435160-mRNA-1 |
| tig0027616 | CDS | 40773 | 41149 | 40773 | ID=Msa1435160-mRNA-1:cds;Parent=Msa1435160-mRNA-1 |
| tig0027616 | CDS | 41502 | 41612 | 41502 | ID=Msa1435160-mRNA-1:cds;Parent=Msa1435160-mRNA-1 |
| tig0027616 | CDS | 41718 | 41813 | 41718 | ID=Msa1435160-mRNA-1:cds;Parent=Msa1435160-mRNA-1 |
| tig0027616 | CDS | 42068 | 42739 | 42068 | ID=Msa1435160-mRNA-1:cds;Parent=Msa1435160-mRNA-1 |
| tig0027616 | three_prime_UTR | 42740 | 43250 | 42740 | ID=Msa1435160-mRNA-1:three_prime_utr;Parent=Msa1435160-mRNA-1 |
| Gene Sequence |
| Protein sequence |
