Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0435690 | XP_003603827.1 | 96.429 | 280 | 4 | 1 | 1 | 274 | 1 | 280 | 0.0 | 552 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0435690 | sp|Q9LN20|P4H3_ARATH | 67.128 | 289 | 78 | 4 | 1 | 274 | 1 | 287 | 6.67e-141 | 400 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0435690 | G7J5W0 | 96.429 | 280 | 4 | 1 | 1 | 274 | 1 | 280 | 0.0 | 552 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003890 | Msa0435690 | 0.804274 | 2.337278e-49 | -8.615850e-47 |
| Msa0011660 | Msa0435690 | -0.826581 | 2.507973e-54 | -8.615850e-47 |
| Msa0011960 | Msa0435690 | 0.822640 | 2.126413e-53 | -8.615850e-47 |
| Msa0012080 | Msa0435690 | 0.802948 | 4.403504e-49 | -8.615850e-47 |
| Msa0015460 | Msa0435690 | 0.809375 | 1.951519e-50 | -8.615850e-47 |
| Msa0015480 | Msa0435690 | 0.802610 | 5.171259e-49 | -8.615850e-47 |
| Msa0032580 | Msa0435690 | 0.811224 | 7.792492e-51 | -8.615850e-47 |
| Msa0041720 | Msa0435690 | 0.825239 | 5.225106e-54 | -8.615850e-47 |
| Msa0044330 | Msa0435690 | 0.807806 | 4.221242e-50 | -8.615850e-47 |
| Msa0046760 | Msa0435690 | 0.811980 | 5.337180e-51 | -8.615850e-47 |
| Msa0054480 | Msa0435690 | 0.802386 | 5.750773e-49 | -8.615850e-47 |
| Msa0065950 | Msa0435690 | 0.813480 | 2.506085e-51 | -8.615850e-47 |
| Msa0075500 | Msa0435690 | 0.800241 | 1.580476e-48 | -8.615850e-47 |
| Msa0076320 | Msa0435690 | 0.801056 | 1.078074e-48 | -8.615850e-47 |
| Msa0078900 | Msa0435690 | 0.810297 | 1.236038e-50 | -8.615850e-47 |
| Msa0081360 | Msa0435690 | 0.809258 | 2.068575e-50 | -8.615850e-47 |
| Msa0081480 | Msa0435690 | 0.807011 | 6.226607e-50 | -8.615850e-47 |
| Msa0089820 | Msa0435690 | 0.829338 | 5.442820e-55 | -8.615850e-47 |
| Msa0090520 | Msa0435690 | 0.811973 | 5.354705e-51 | -8.615850e-47 |
| Msa0090570 | Msa0435690 | 0.828158 | 1.050197e-54 | -8.615850e-47 |
| Msa0091250 | Msa0435690 | -0.838753 | 2.385048e-57 | -8.615850e-47 |
| Msa0097590 | Msa0435690 | 0.804143 | 2.488567e-49 | -8.615850e-47 |
| Msa0100090 | Msa0435690 | 0.813245 | 2.822668e-51 | -8.615850e-47 |
| Msa0105620 | Msa0435690 | 0.813687 | 2.255866e-51 | -8.615850e-47 |
| Msa0109590 | Msa0435690 | 0.826571 | 2.522458e-54 | -8.615850e-47 |
| Msa0115270 | Msa0435690 | 0.822100 | 2.838157e-53 | -8.615850e-47 |
| Msa0115390 | Msa0435690 | 0.808148 | 3.570098e-50 | -8.615850e-47 |
| Msa0131330 | Msa0435690 | 0.808623 | 2.827351e-50 | -8.615850e-47 |
| Msa0136070 | Msa0435690 | 0.828722 | 7.677256e-55 | -8.615850e-47 |
| Msa0136100 | Msa0435690 | 0.810393 | 1.178460e-50 | -8.615850e-47 |
| Msa0137990 | Msa0435690 | 0.811638 | 6.333697e-51 | -8.615850e-47 |
| Msa0138020 | Msa0435690 | 0.812621 | 3.865650e-51 | -8.615850e-47 |
| Msa0140500 | Msa0435690 | -0.811018 | 8.634480e-51 | -8.615850e-47 |
| Msa0150820 | Msa0435690 | 0.807448 | 5.029581e-50 | -8.615850e-47 |
| Msa0150840 | Msa0435690 | 0.819230 | 1.295520e-52 | -8.615850e-47 |
| Msa0160550 | Msa0435690 | 0.809612 | 1.736142e-50 | -8.615850e-47 |
| Msa0165220 | Msa0435690 | 0.808262 | 3.375936e-50 | -8.615850e-47 |
| Msa0167980 | Msa0435690 | 0.810851 | 9.386593e-51 | -8.615850e-47 |
| Msa0168230 | Msa0435690 | 0.800851 | 1.187206e-48 | -8.615850e-47 |
| Msa0171540 | Msa0435690 | 0.838936 | 2.137956e-57 | -8.615850e-47 |
| Msa0172780 | Msa0435690 | 0.803319 | 3.690271e-49 | -8.615850e-47 |
| Msa0172970 | Msa0435690 | 0.809439 | 1.890959e-50 | -8.615850e-47 |
| Msa0174390 | Msa0435690 | 0.801543 | 8.570379e-49 | -8.615850e-47 |
| Msa0177700 | Msa0435690 | -0.801107 | 1.052187e-48 | -8.615850e-47 |
| Msa0180500 | Msa0435690 | 0.821196 | 4.590405e-53 | -8.615850e-47 |
| Msa0183850 | Msa0435690 | 0.838840 | 2.263926e-57 | -8.615850e-47 |
| Msa0183900 | Msa0435690 | 0.805798 | 1.121706e-49 | -8.615850e-47 |
| Msa0187120 | Msa0435690 | 0.820816 | 5.615202e-53 | -8.615850e-47 |
| Msa0187250 | Msa0435690 | 0.807123 | 5.895420e-50 | -8.615850e-47 |
| Msa0187830 | Msa0435690 | 0.811968 | 5.369314e-51 | -8.615850e-47 |
| Msa0189300 | Msa0435690 | 0.816127 | 6.488950e-52 | -8.615850e-47 |
| Msa0189520 | Msa0435690 | 0.818926 | 1.518573e-52 | -8.615850e-47 |
| Msa0193470 | Msa0435690 | 0.822504 | 2.286170e-53 | -8.615850e-47 |
| Msa0197660 | Msa0435690 | 0.843172 | 1.650022e-58 | -8.615850e-47 |
| Msa0217700 | Msa0435690 | 0.826002 | 3.444526e-54 | -8.615850e-47 |
| Msa0228070 | Msa0435690 | 0.804593 | 2.005346e-49 | -8.615850e-47 |
| Msa0229170 | Msa0435690 | 0.809653 | 1.701386e-50 | -8.615850e-47 |
| Msa0229380 | Msa0435690 | 0.825640 | 4.197366e-54 | -8.615850e-47 |
| Msa0230560 | Msa0435690 | 0.818791 | 1.630130e-52 | -8.615850e-47 |
| Msa0231660 | Msa0435690 | 0.822630 | 2.136986e-53 | -8.615850e-47 |
| Msa0367870 | Msa0435690 | 0.808061 | 3.726626e-50 | -8.615850e-47 |
| Msa0371250 | Msa0435690 | 0.810048 | 1.398770e-50 | -8.615850e-47 |
| Msa0372340 | Msa0435690 | 0.800742 | 1.249251e-48 | -8.615850e-47 |
| Msa0379570 | Msa0435690 | 0.816045 | 6.771378e-52 | -8.615850e-47 |
| Msa0381610 | Msa0435690 | -0.803822 | 2.901449e-49 | -8.615850e-47 |
| Msa0386040 | Msa0435690 | 0.815962 | 7.064703e-52 | -8.615850e-47 |
| Msa0388280 | Msa0435690 | 0.805564 | 1.256059e-49 | -8.615850e-47 |
| Msa0402790 | Msa0435690 | 0.828970 | 6.686225e-55 | -8.615850e-47 |
| Msa0412840 | Msa0435690 | 0.809140 | 2.192503e-50 | -8.615850e-47 |
| Msa0428050 | Msa0435690 | 0.813344 | 2.684314e-51 | -8.615850e-47 |
| Msa0428080 | Msa0435690 | 0.815044 | 1.130959e-51 | -8.615850e-47 |
| Msa0434180 | Msa0435690 | 0.819364 | 1.207691e-52 | -8.615850e-47 |
| Msa0435690 | Msa0450400 | -0.800893 | 1.164066e-48 | -8.615850e-47 |
| Msa0435690 | Msa0457510 | 0.821260 | 4.437968e-53 | -8.615850e-47 |
| Msa0435690 | Msa0460590 | 0.801632 | 8.215259e-49 | -8.615850e-47 |
| Msa0435690 | Msa0467220 | 0.804144 | 2.487236e-49 | -8.615850e-47 |
| Msa0435690 | Msa0468320 | 0.810555 | 1.087700e-50 | -8.615850e-47 |
| Msa0435690 | Msa0469620 | -0.806630 | 7.494935e-50 | -8.615850e-47 |
| Msa0435690 | Msa0479660 | 0.890160 | 1.266802e-73 | -8.615850e-47 |
| Msa0435690 | Msa0485490 | 0.807633 | 4.594452e-50 | -8.615850e-47 |
| Msa0435690 | Msa0493410 | 0.803135 | 4.027894e-49 | -8.615850e-47 |
| Msa0435690 | Msa0506670 | 0.803250 | 3.813350e-49 | -8.615850e-47 |
| Msa0435690 | Msa0510930 | 0.820838 | 5.551869e-53 | -8.615850e-47 |
| Msa0435690 | Msa0512750 | 0.807160 | 5.788151e-50 | -8.615850e-47 |
| Msa0435690 | Msa0517090 | 0.833805 | 4.318375e-56 | -8.615850e-47 |
| Msa0435690 | Msa0518380 | 0.815397 | 9.442613e-52 | -8.615850e-47 |
| Msa0435690 | Msa0521670 | 0.823225 | 1.552920e-53 | -8.615850e-47 |
| Msa0435690 | Msa0521740 | 0.811876 | 5.620926e-51 | -8.615850e-47 |
| Msa0435690 | Msa0526070 | -0.803567 | 3.278523e-49 | -8.615850e-47 |
| Msa0435690 | Msa0529890 | 0.808211 | 3.461501e-50 | -8.615850e-47 |
| Msa0435690 | Msa0530100 | 0.816876 | 4.410044e-52 | -8.615850e-47 |
| Msa0435690 | Msa0530400 | 0.829610 | 4.676189e-55 | -8.615850e-47 |
| Msa0435690 | Msa0532930 | 0.801788 | 7.630541e-49 | -8.615850e-47 |
| Msa0435690 | Msa0532980 | 0.817171 | 3.786492e-52 | -8.615850e-47 |
| Msa0435690 | Msa0532990 | 0.843956 | 1.018362e-58 | -8.615850e-47 |
| Msa0435690 | Msa0541040 | 0.800176 | 1.629463e-48 | -8.615850e-47 |
| Msa0435690 | Msa0542090 | 0.801352 | 9.374867e-49 | -8.615850e-47 |
| Msa0435690 | Msa0542130 | 0.800643 | 1.309188e-48 | -8.615850e-47 |
| Msa0435690 | Msa0542750 | 0.801442 | 8.985623e-49 | -8.615850e-47 |
| Msa0435690 | Msa0545080 | 0.810345 | 1.206903e-50 | -8.615850e-47 |
| Msa0435690 | Msa0545700 | 0.824541 | 7.633148e-54 | -8.615850e-47 |
| Msa0435690 | Msa0548920 | 0.814384 | 1.583845e-51 | -8.615850e-47 |
| Msa0435690 | Msa0555450 | 0.835069 | 2.079805e-56 | -8.615850e-47 |
| Msa0435690 | Msa0567340 | 0.806829 | 6.802676e-50 | -8.615850e-47 |
| Msa0435690 | Msa0572840 | 0.809098 | 2.237485e-50 | -8.615850e-47 |
| Msa0435690 | Msa0587030 | 0.801341 | 9.425105e-49 | -8.615850e-47 |
| Msa0435690 | Msa0588870 | 0.810200 | 1.297245e-50 | -8.615850e-47 |
| Msa0435690 | Msa0592440 | 0.817354 | 3.443598e-52 | -8.615850e-47 |
| Msa0435690 | Msa0610130 | 0.814336 | 1.623037e-51 | -8.615850e-47 |
| Msa0435690 | Msa0610180 | 0.804738 | 1.869855e-49 | -8.615850e-47 |
| Msa0435690 | Msa0618470 | 0.804664 | 1.938424e-49 | -8.615850e-47 |
| Msa0435690 | Msa0620620 | 0.846617 | 1.940502e-59 | -8.615850e-47 |
| Msa0435690 | Msa0623080 | 0.800487 | 1.408350e-48 | -8.615850e-47 |
| Msa0435690 | Msa0625720 | 0.801527 | 8.631735e-49 | -8.615850e-47 |
| Msa0435690 | Msa0626850 | 0.802631 | 5.119534e-49 | -8.615850e-47 |
| Msa0435690 | Msa0643320 | 0.830550 | 2.756544e-55 | -8.615850e-47 |
| Msa0435690 | Msa0654010 | 0.809746 | 1.624617e-50 | -8.615850e-47 |
| Msa0435690 | Msa0661710 | 0.813161 | 2.944329e-51 | -8.615850e-47 |
| Msa0435690 | Msa0664490 | 0.819047 | 1.426045e-52 | -8.615850e-47 |
| Msa0435690 | Msa0664970 | 0.800500 | 1.400052e-48 | -8.615850e-47 |
| Msa0435690 | Msa0672450 | 0.808539 | 2.946667e-50 | -8.615850e-47 |
| Msa0435690 | Msa0679290 | -0.843685 | 1.203388e-58 | -8.615850e-47 |
| Msa0435690 | Msa0682090 | 0.805597 | 1.235967e-49 | -8.615850e-47 |
| Msa0435690 | Msa0682140 | 0.803192 | 3.918971e-49 | -8.615850e-47 |
| Msa0435690 | Msa0683140 | 0.821507 | 3.892368e-53 | -8.615850e-47 |
| Msa0435690 | Msa0683600 | 0.839238 | 1.785564e-57 | -8.615850e-47 |
| Msa0435690 | Msa0703780 | 0.807100 | 5.962144e-50 | -8.615850e-47 |
| Msa0435690 | Msa0703910 | 0.806941 | 6.440178e-50 | -8.615850e-47 |
| Msa0435690 | Msa0705190 | 0.818338 | 2.065402e-52 | -8.615850e-47 |
| Msa0435690 | Msa0707250 | 0.820770 | 5.755438e-53 | -8.615850e-47 |
| Msa0435690 | Msa0711150 | 0.835888 | 1.290503e-56 | -8.615850e-47 |
| Msa0435690 | Msa0715410 | 0.835731 | 1.414487e-56 | -8.615850e-47 |
| Msa0435690 | Msa0738440 | 0.803954 | 2.723565e-49 | -8.615850e-47 |
| Msa0435690 | Msa0747270 | 0.813739 | 2.197762e-51 | -8.615850e-47 |
| Msa0435690 | Msa0755050 | 0.811585 | 6.502888e-51 | -8.615850e-47 |
| Msa0435690 | Msa0756460 | 0.807132 | 5.867388e-50 | -8.615850e-47 |
| Msa0435690 | Msa0760350 | 0.804620 | 1.979079e-49 | -8.615850e-47 |
| Msa0435690 | Msa0768230 | 0.801700 | 7.955285e-49 | -8.615850e-47 |
| Msa0435690 | Msa0784380 | 0.817135 | 3.857135e-52 | -8.615850e-47 |
| Msa0435690 | Msa0793800 | 0.805276 | 1.443234e-49 | -8.615850e-47 |
| Msa0435690 | Msa0794730 | 0.800046 | 1.732007e-48 | -8.615850e-47 |
| Msa0435690 | Msa0800370 | 0.816698 | 4.836833e-52 | -8.615850e-47 |
| Msa0435690 | Msa0801730 | 0.804228 | 2.389451e-49 | -8.615850e-47 |
| Msa0435690 | Msa0817460 | 0.810879 | 9.252711e-51 | -8.615850e-47 |
| Msa0435690 | Msa0820850 | 0.822320 | 2.522922e-53 | -8.615850e-47 |
| Msa0435690 | Msa0826760 | 0.850554 | 1.575586e-60 | -8.615850e-47 |
| Msa0435690 | Msa0830230 | 0.809369 | 1.957703e-50 | -8.615850e-47 |
| Msa0435690 | Msa0831530 | 0.814453 | 1.528839e-51 | -8.615850e-47 |
| Msa0435690 | Msa0833190 | -0.806473 | 8.088267e-50 | -8.615850e-47 |
| Msa0435690 | Msa0844390 | 0.806758 | 7.039336e-50 | -8.615850e-47 |
| Msa0435690 | Msa0844420 | 0.805444 | 1.330814e-49 | -8.615850e-47 |
| Msa0435690 | Msa0844450 | 0.821972 | 3.039075e-53 | -8.615850e-47 |
| Msa0435690 | Msa0844490 | 0.804782 | 1.831416e-49 | -8.615850e-47 |
| Msa0435690 | Msa0857640 | 0.826687 | 2.365526e-54 | -8.615850e-47 |
| Msa0435690 | Msa0861130 | 0.820559 | 6.434471e-53 | -8.615850e-47 |
| Msa0435690 | Msa0871270 | 0.801324 | 9.502678e-49 | -8.615850e-47 |
| Msa0435690 | Msa0879080 | 0.815948 | 7.117836e-52 | -8.615850e-47 |
| Msa0435690 | Msa0890550 | 0.821816 | 3.302326e-53 | -8.615850e-47 |
| Msa0435690 | Msa0897330 | 0.819276 | 1.264161e-52 | -8.615850e-47 |
| Msa0435690 | Msa0903620 | 0.823468 | 1.362568e-53 | -8.615850e-47 |
| Msa0435690 | Msa0936300 | 0.837602 | 4.717492e-57 | -8.615850e-47 |
| Msa0435690 | Msa0938220 | 0.807402 | 5.143685e-50 | -8.615850e-47 |
| Msa0435690 | Msa0942550 | -0.835737 | 1.409336e-56 | -8.615850e-47 |
| Msa0435690 | Msa0942560 | -0.804291 | 2.317615e-49 | -8.615850e-47 |
| Msa0435690 | Msa0951400 | 0.809866 | 1.530774e-50 | -8.615850e-47 |
| Msa0435690 | Msa0960740 | 0.862697 | 4.218448e-64 | -8.615850e-47 |
| Msa0435690 | Msa0966750 | 0.804242 | 2.373056e-49 | -8.615850e-47 |
| Msa0435690 | Msa0969810 | 0.805149 | 1.534797e-49 | -8.615850e-47 |
| Msa0435690 | Msa0973100 | 0.830699 | 2.535085e-55 | -8.615850e-47 |
| Msa0435690 | Msa0974080 | 0.816883 | 4.395528e-52 | -8.615850e-47 |
| Msa0435690 | Msa0980020 | 0.825142 | 5.506649e-54 | -8.615850e-47 |
| Msa0435690 | Msa0994370 | 0.822054 | 2.907977e-53 | -8.615850e-47 |
| Msa0435690 | Msa0994390 | 0.813487 | 2.497311e-51 | -8.615850e-47 |
| Msa0435690 | Msa0994850 | 0.800382 | 1.479384e-48 | -8.615850e-47 |
| Msa0435690 | Msa0999970 | 0.804567 | 2.030409e-49 | -8.615850e-47 |
| Msa0435690 | Msa1000930 | 0.814387 | 1.581209e-51 | -8.615850e-47 |
| Msa0435690 | Msa1001390 | 0.807120 | 5.904340e-50 | -8.615850e-47 |
| Msa0435690 | Msa1003030 | 0.802672 | 5.020692e-49 | -8.615850e-47 |
| Msa0435690 | Msa1003620 | 0.813796 | 2.134970e-51 | -8.615850e-47 |
| Msa0435690 | Msa1014540 | 0.803626 | 3.185980e-49 | -8.615850e-47 |
| Msa0435690 | Msa1025080 | 0.812731 | 3.657959e-51 | -8.615850e-47 |
| Msa0435690 | Msa1026940 | 0.818494 | 1.903434e-52 | -8.615850e-47 |
| Msa0435690 | Msa1036710 | -0.807404 | 5.138985e-50 | -8.615850e-47 |
| Msa0435690 | Msa1037420 | 0.812621 | 3.865650e-51 | -8.615850e-47 |
| Msa0435690 | Msa1039710 | -0.814947 | 1.188406e-51 | -8.615850e-47 |
| Msa0435690 | Msa1040840 | 0.833527 | 5.066784e-56 | -8.615850e-47 |
| Msa0435690 | Msa1046460 | 0.815262 | 1.011515e-51 | -8.615850e-47 |
| Msa0435690 | Msa1048160 | 0.801115 | 1.048450e-48 | -8.615850e-47 |
| Msa0435690 | Msa1052330 | 0.813800 | 2.130862e-51 | -8.615850e-47 |
| Msa0435690 | Msa1064250 | 0.862764 | 4.023268e-64 | -8.615850e-47 |
| Msa0435690 | Msa1075540 | 0.800524 | 1.384216e-48 | -8.615850e-47 |
| Msa0435690 | Msa1076960 | 0.813483 | 2.502076e-51 | -8.615850e-47 |
| Msa0435690 | Msa1077030 | 0.813103 | 3.032351e-51 | -8.615850e-47 |
| Msa0435690 | Msa1079590 | 0.804007 | 2.655350e-49 | -8.615850e-47 |
| Msa0435690 | Msa1080800 | 0.811007 | 8.683440e-51 | -8.615850e-47 |
| Msa0435690 | Msa1088290 | 0.803912 | 2.779953e-49 | -8.615850e-47 |
| Msa0435690 | Msa1089320 | 0.816266 | 6.043456e-52 | -8.615850e-47 |
| Msa0435690 | Msa1093260 | 0.821354 | 4.220800e-53 | -8.615850e-47 |
| Msa0435690 | Msa1095650 | 0.833056 | 6.640434e-56 | -8.615850e-47 |
| Msa0435690 | Msa1103980 | 0.812250 | 4.658992e-51 | -8.615850e-47 |
| Msa0435690 | Msa1107190 | 0.829414 | 5.217652e-55 | -8.615850e-47 |
| Msa0435690 | Msa1109090 | 0.821387 | 4.149382e-53 | -8.615850e-47 |
| Msa0435690 | Msa1111870 | 0.855578 | 5.744656e-62 | -8.615850e-47 |
| Msa0435690 | Msa1113170 | 0.817431 | 3.309326e-52 | -8.615850e-47 |
| Msa0435690 | Msa1121490 | 0.806686 | 7.292608e-50 | -8.615850e-47 |
| Msa0435690 | Msa1122860 | 0.813810 | 2.119588e-51 | -8.615850e-47 |
| Msa0435690 | Msa1124410 | 0.824871 | 6.382324e-54 | -8.615850e-47 |
| Msa0435690 | Msa1133230 | 0.811172 | 7.994585e-51 | -8.615850e-47 |
| Msa0435690 | Msa1133250 | 0.804551 | 2.046291e-49 | -8.615850e-47 |
| Msa0435690 | Msa1152920 | 0.826310 | 2.910706e-54 | -8.615850e-47 |
| Msa0435690 | Msa1154280 | 0.817322 | 3.501078e-52 | -8.615850e-47 |
| Msa0435690 | Msa1162780 | 0.825871 | 3.700862e-54 | -8.615850e-47 |
| Msa0435690 | Msa1173300 | 0.819666 | 1.030464e-52 | -8.615850e-47 |
| Msa0435690 | Msa1178180 | 0.816038 | 6.793338e-52 | -8.615850e-47 |
| Msa0435690 | Msa1181250 | 0.811469 | 6.893043e-51 | -8.615850e-47 |
| Msa0435690 | Msa1181330 | 0.807193 | 5.696931e-50 | -8.615850e-47 |
| Msa0435690 | Msa1206360 | 0.805874 | 1.081295e-49 | -8.615850e-47 |
| Msa0435690 | Msa1206850 | 0.802084 | 6.636468e-49 | -8.615850e-47 |
| Msa0435690 | Msa1207310 | 0.800465 | 1.422989e-48 | -8.615850e-47 |
| Msa0435690 | Msa1210020 | 0.831402 | 1.704141e-55 | -8.615850e-47 |
| Msa0435690 | Msa1210110 | 0.813666 | 2.280421e-51 | -8.615850e-47 |
| Msa0435690 | Msa1211140 | -0.838127 | 3.457844e-57 | -8.615850e-47 |
| Msa0435690 | Msa1225100 | 0.812147 | 4.906764e-51 | -8.615850e-47 |
| Msa0435690 | Msa1232740 | 0.811334 | 7.375979e-51 | -8.615850e-47 |
| Msa0435690 | Msa1238930 | 0.820460 | 6.778065e-53 | -8.615850e-47 |
| Msa0435690 | Msa1253800 | 0.838221 | 3.270732e-57 | -8.615850e-47 |
| Msa0435690 | Msa1254730 | 0.800780 | 1.227273e-48 | -8.615850e-47 |
| Msa0435690 | Msa1259590 | -0.816145 | 6.429402e-52 | -8.615850e-47 |
| Msa0435690 | Msa1262720 | 0.803255 | 3.803593e-49 | -8.615850e-47 |
| Msa0435690 | Msa1270660 | 0.803872 | 2.832696e-49 | -8.615850e-47 |
| Msa0435690 | Msa1274560 | 0.807033 | 6.158159e-50 | -8.615850e-47 |
| Msa0435690 | Msa1275110 | 0.806690 | 7.277587e-50 | -8.615850e-47 |
| Msa0435690 | Msa1275360 | 0.809171 | 2.159347e-50 | -8.615850e-47 |
| Msa0435690 | Msa1275590 | 0.806563 | 7.740686e-50 | -8.615850e-47 |
| Msa0435690 | Msa1277660 | 0.817735 | 2.826102e-52 | -8.615850e-47 |
| Msa0435690 | Msa1298510 | 0.836822 | 7.471513e-57 | -8.615850e-47 |
| Msa0435690 | Msa1299290 | -0.838865 | 2.230211e-57 | -8.615850e-47 |
| Msa0435690 | Msa1302850 | 0.813857 | 2.069569e-51 | -8.615850e-47 |
| Msa0435690 | Msa1305190 | 0.814146 | 1.786933e-51 | -8.615850e-47 |
| Msa0435690 | Msa1305200 | 0.800007 | 1.763944e-48 | -8.615850e-47 |
| Msa0435690 | Msa1305340 | 0.802229 | 6.193814e-49 | -8.615850e-47 |
| Msa0435690 | Msa1305810 | 0.803845 | 2.870160e-49 | -8.615850e-47 |
| Msa0435690 | Msa1306560 | 0.813832 | 2.096610e-51 | -8.615850e-47 |
| Msa0435690 | Msa1307600 | 0.809385 | 1.942176e-50 | -8.615850e-47 |
| Msa0435690 | Msa1313320 | 0.816850 | 4.471376e-52 | -8.615850e-47 |
| Msa0435690 | Msa1316360 | 0.801783 | 7.649840e-49 | -8.615850e-47 |
| Msa0435690 | Msa1329870 | 0.811395 | 7.151312e-51 | -8.615850e-47 |
| Msa0435690 | Msa1332040 | -0.820011 | 8.590888e-53 | -8.615850e-47 |
| Msa0435690 | Msa1336560 | 0.812031 | 5.200662e-51 | -8.615850e-47 |
| Msa0435690 | Msa1344340 | 0.822488 | 2.306288e-53 | -8.615850e-47 |
| Msa0435690 | Msa1345220 | 0.806442 | 8.208065e-50 | -8.615850e-47 |
| Msa0435690 | Msa1355890 | 0.826029 | 3.393585e-54 | -8.615850e-47 |
| Msa0435690 | Msa1358670 | 0.985932 | 3.940013e-165 | -8.615850e-47 |
| Msa0435690 | Msa1364210 | 0.818685 | 1.722897e-52 | -8.615850e-47 |
| Msa0435690 | Msa1365600 | 0.813983 | 1.941677e-51 | -8.615850e-47 |
| Msa0435690 | Msa1380220 | 0.808842 | 2.538593e-50 | -8.615850e-47 |
| Msa0435690 | Msa1381480 | 0.820919 | 5.318753e-53 | -8.615850e-47 |
| Msa0435690 | Msa1382790 | 0.824378 | 8.339033e-54 | -8.615850e-47 |
| Msa0435690 | Msa1384870 | 0.812586 | 3.934407e-51 | -8.615850e-47 |
| Msa0435690 | Msa1390690 | 0.801544 | 8.566575e-49 | -8.615850e-47 |
| Msa0435690 | Msa1390700 | 0.805899 | 1.068257e-49 | -8.615850e-47 |
| Msa0435690 | Msa1392910 | 0.810866 | 9.313732e-51 | -8.615850e-47 |
| Msa0435690 | Msa1403340 | 0.822947 | 1.803334e-53 | -8.615850e-47 |
| Msa0435690 | Msa1405220 | 0.809031 | 2.313127e-50 | -8.615850e-47 |
| Msa0435690 | Msa1408010 | 0.806251 | 9.006140e-50 | -8.615850e-47 |
| Msa0435690 | Msa1412530 | 0.800155 | 1.645744e-48 | -8.615850e-47 |
| Msa0435690 | Msa1416370 | 0.813274 | 2.780633e-51 | -8.615850e-47 |
| Msa0435690 | Msa1424750 | 0.818426 | 1.972791e-52 | -8.615850e-47 |
| Msa0435690 | Msa1445390 | -0.808718 | 2.698283e-50 | -8.615850e-47 |
| Msa0435690 | Msa1449340 | -0.815528 | 8.829707e-52 | -8.615850e-47 |
| Msa0435690 | Msa1454450 | 0.805257 | 1.456885e-49 | -8.615850e-47 |
| Msa0435690 | Msa1454570 | 0.803461 | 3.448360e-49 | -8.615850e-47 |
| Msa0435690 | Msa1454950 | 0.813566 | 2.398994e-51 | -8.615850e-47 |
| Msa0435690 | Msa1457160 | 0.833943 | 3.989281e-56 | -8.615850e-47 |
| Msa0435690 | Msa1457920 | 0.801595 | 8.359818e-49 | -8.615850e-47 |
| Msa0435690 | Msa1460320 | -0.812863 | 3.422089e-51 | -8.615850e-47 |
| Msa0435690 | Msa1466540 | 0.808794 | 2.599149e-50 | -8.615850e-47 |
| Msa0239800 | Msa0435690 | 0.844944 | 5.523958e-59 | -8.615850e-47 |
| Msa0241470 | Msa0435690 | 0.820523 | 6.559190e-53 | -8.615850e-47 |
| Msa0257520 | Msa0435690 | 0.809081 | 2.256648e-50 | -8.615850e-47 |
| Msa0259210 | Msa0435690 | 0.812590 | 3.927998e-51 | -8.615850e-47 |
| Msa0259220 | Msa0435690 | 0.811198 | 7.892105e-51 | -8.615850e-47 |
| Msa0267370 | Msa0435690 | 0.811895 | 5.567930e-51 | -8.615850e-47 |
| Msa0268090 | Msa0435690 | 0.807141 | 5.843281e-50 | -8.615850e-47 |
| Msa0271360 | Msa0435690 | 0.829002 | 6.567596e-55 | -8.615850e-47 |
| Msa0271530 | Msa0435690 | 0.804805 | 1.810882e-49 | -8.615850e-47 |
| Msa0275010 | Msa0435690 | 0.801799 | 7.591086e-49 | -8.615850e-47 |
| Msa0277820 | Msa0435690 | 0.815038 | 1.134169e-51 | -8.615850e-47 |
| Msa0279220 | Msa0435690 | 0.813495 | 2.486875e-51 | -8.615850e-47 |
| Msa0279240 | Msa0435690 | 0.801635 | 8.205322e-49 | -8.615850e-47 |
| Msa0288100 | Msa0435690 | 0.801483 | 8.814604e-49 | -8.615850e-47 |
| Msa0296820 | Msa0435690 | 0.851309 | 9.653635e-61 | -8.615850e-47 |
| Msa0299870 | Msa0435690 | 0.808477 | 3.038084e-50 | -8.615850e-47 |
| Msa0309750 | Msa0435690 | 0.804228 | 2.389131e-49 | -8.615850e-47 |
| Msa0317510 | Msa0435690 | 0.834656 | 2.642271e-56 | -8.615850e-47 |
| Msa0317720 | Msa0435690 | 0.830735 | 2.483403e-55 | -8.615850e-47 |
| Msa0317750 | Msa0435690 | 0.815965 | 7.054835e-52 | -8.615850e-47 |
| Msa0317970 | Msa0435690 | 0.814325 | 1.631985e-51 | -8.615850e-47 |
| Msa0330500 | Msa0435690 | 0.802028 | 6.811811e-49 | -8.615850e-47 |
| Msa0336310 | Msa0435690 | 0.817642 | 2.965922e-52 | -8.615850e-47 |
| Msa0336320 | Msa0435690 | 0.813196 | 2.893097e-51 | -8.615850e-47 |
| Msa0339250 | Msa0435690 | 0.802022 | 6.833216e-49 | -8.615850e-47 |
| Msa0340450 | Msa0435690 | 0.833974 | 3.917841e-56 | -8.615850e-47 |
| Msa0340690 | Msa0435690 | 0.825617 | 4.252436e-54 | -8.615850e-47 |
| Msa0340710 | Msa0435690 | 0.823017 | 1.736860e-53 | -8.615850e-47 |
| Msa0357900 | Msa0435690 | 0.804928 | 1.706888e-49 | -8.615850e-47 |
| Msa0363790 | Msa0435690 | 0.801156 | 1.028433e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0435690 | MtrunA17_Chr3g0143381 | 96.429 | 280 | 4 | 1 | 1 | 274 | 1 | 280 | 0.0 | 552 |
| Msa0435690 | MtrunA17_Chr5g0406051 | 63.918 | 291 | 86 | 4 | 1 | 274 | 1 | 289 | 2.09e-135 | 384 |
| Msa0435690 | MtrunA17_Chr8g0371221 | 59.929 | 282 | 101 | 4 | 1 | 274 | 1 | 278 | 1.73e-117 | 338 |
| Msa0435690 | MtrunA17_Chr8g0371251 | 59.712 | 278 | 103 | 3 | 5 | 274 | 3 | 279 | 1.40e-116 | 335 |
| Msa0435690 | MtrunA17_Chr8g0371281 | 69.444 | 216 | 60 | 1 | 63 | 272 | 60 | 275 | 2.26e-115 | 332 |
| Msa0435690 | MtrunA17_Chr8g0371231 | 68.912 | 193 | 60 | 0 | 80 | 272 | 9 | 201 | 3.09e-102 | 296 |
| Msa0435690 | MtrunA17_Chr3g0143361 | 71.111 | 180 | 46 | 1 | 95 | 274 | 1 | 174 | 4.05e-90 | 265 |
| Msa0435690 | MtrunA17_Chr6g0452281 | 53.333 | 240 | 104 | 3 | 40 | 273 | 23 | 260 | 4.74e-83 | 251 |
| Msa0435690 | MtrunA17_Chr8g0371241 | 64.912 | 171 | 44 | 1 | 99 | 269 | 4 | 158 | 1.91e-80 | 240 |
| Msa0435690 | MtrunA17_Chr2g0286811 | 47.471 | 257 | 112 | 4 | 27 | 272 | 9 | 253 | 7.14e-76 | 233 |
| Msa0435690 | MtrunA17_Chr4g0066531 | 53.589 | 209 | 89 | 2 | 72 | 272 | 40 | 248 | 2.11e-74 | 229 |
| Msa0435690 | MtrunA17_Chr3g0143371 | 65.605 | 157 | 49 | 1 | 95 | 251 | 1 | 152 | 1.59e-69 | 211 |
| Msa0435690 | MtrunA17_Chr3g0143351 | 61.202 | 183 | 58 | 3 | 95 | 274 | 1 | 173 | 2.56e-66 | 204 |
| Msa0435690 | MtrunA17_Chr1g0213811 | 51.185 | 211 | 79 | 4 | 70 | 267 | 76 | 275 | 3.14e-64 | 202 |
| Msa0435690 | MtrunA17_Chr4g0053801 | 45.498 | 211 | 96 | 9 | 70 | 268 | 86 | 289 | 1.85e-51 | 170 |
| Msa0435690 | MtrunA17_Chr5g0401481 | 39.286 | 224 | 105 | 7 | 70 | 267 | 84 | 302 | 5.80e-42 | 146 |
| Msa0435690 | MtrunA17_Chr6g0470551 | 33.716 | 261 | 145 | 9 | 16 | 270 | 3 | 241 | 4.97e-33 | 122 |
| Msa0435690 | MtrunA17_Chr3g0098671 | 70.588 | 68 | 18 | 2 | 145 | 211 | 31 | 97 | 5.68e-24 | 93.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0435690 | AT1G20270.1 | 67.128 | 289 | 78 | 4 | 1 | 274 | 1 | 287 | 6.78e-142 | 400 |
| Msa0435690 | AT5G66060.1 | 64.583 | 288 | 88 | 3 | 1 | 274 | 2 | 289 | 5.97e-136 | 385 |
| Msa0435690 | AT2G17720.1 | 65.992 | 247 | 70 | 3 | 42 | 274 | 45 | 291 | 8.15e-121 | 347 |
| Msa0435690 | AT4G35810.1 | 58.824 | 289 | 102 | 2 | 1 | 272 | 1 | 289 | 7.55e-118 | 340 |
| Msa0435690 | AT4G35810.2 | 58.824 | 289 | 102 | 2 | 1 | 272 | 1 | 289 | 7.55e-118 | 340 |
| Msa0435690 | AT5G66060.2 | 61.111 | 234 | 79 | 3 | 1 | 222 | 2 | 235 | 1.83e-99 | 291 |
| Msa0435690 | AT1G20270.2 | 60.591 | 203 | 63 | 4 | 1 | 188 | 1 | 201 | 5.29e-81 | 243 |
| Msa0435690 | AT1G20270.3 | 60.591 | 203 | 63 | 4 | 1 | 188 | 1 | 201 | 5.29e-81 | 243 |
| Msa0435690 | AT3G28480.1 | 46.743 | 261 | 131 | 3 | 19 | 273 | 7 | 265 | 7.35e-79 | 241 |
| Msa0435690 | AT5G18900.1 | 50.000 | 224 | 99 | 3 | 57 | 272 | 30 | 248 | 1.01e-73 | 228 |
| Msa0435690 | AT3G06300.1 | 53.110 | 209 | 90 | 2 | 72 | 272 | 41 | 249 | 6.54e-73 | 226 |
| Msa0435690 | AT3G28490.1 | 53.810 | 210 | 85 | 4 | 72 | 272 | 35 | 241 | 6.53e-72 | 223 |
| Msa0435690 | AT3G28480.2 | 43.123 | 269 | 137 | 5 | 19 | 273 | 7 | 273 | 4.62e-67 | 211 |
| Msa0435690 | AT2G43080.1 | 53.140 | 207 | 83 | 3 | 70 | 268 | 78 | 278 | 1.24e-64 | 204 |
| Msa0435690 | AT4G35820.1 | 52.000 | 200 | 60 | 3 | 66 | 251 | 85 | 262 | 3.10e-64 | 202 |
| Msa0435690 | AT4G33910.1 | 42.105 | 209 | 106 | 6 | 70 | 268 | 79 | 282 | 8.76e-47 | 158 |
| Msa0435690 | AT2G23096.1 | 38.164 | 207 | 118 | 3 | 72 | 272 | 71 | 273 | 8.17e-41 | 142 |
| Msa0435690 | AT4G25600.1 | 33.005 | 203 | 104 | 5 | 72 | 268 | 62 | 238 | 3.42e-23 | 96.3 |
| Msa0435690 | AT4G25600.3 | 32.990 | 194 | 101 | 5 | 77 | 268 | 11 | 177 | 6.12e-21 | 89.0 |
| Msa0435690 | AT2G43080.2 | 53.261 | 92 | 35 | 2 | 70 | 153 | 78 | 169 | 6.82e-21 | 87.8 |
| Msa0435690 | AT4G25600.4 | 32.990 | 194 | 101 | 5 | 77 | 268 | 8 | 174 | 6.87e-21 | 89.0 |
| Msa0435690 | AT4G25600.2 | 32.990 | 194 | 101 | 5 | 77 | 268 | 20 | 186 | 7.28e-21 | 89.0 |
Find 71 sgRNAs with CRISPR-Local
Find 280 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATTCTCCTTTCAATATTC+TGG | 0.147205 | 3_2:-89023182 | None:intergenic |
| TAATCTACTGTTTAGGGTTT+TGG | 0.162740 | 3_2:+89020458 | Msa0435690:five_prime_UTR |
| CTTGAGGAGTACAAAGTTTA+AGG | 0.187091 | 3_2:+89024417 | Msa0435690:CDS |
| CAAATGCTCACATTCTTCTT+TGG | 0.212251 | 3_2:-89022896 | None:intergenic |
| AAACTATTAATCTACTGTTT+AGG | 0.223344 | 3_2:+89020451 | Msa0435690:five_prime_UTR |
| AAAGAATCATCGGTTGTATT+AGG | 0.249163 | 3_2:-89020649 | None:intergenic |
| AACTATTAATCTACTGTTTA+GGG | 0.254382 | 3_2:+89020452 | Msa0435690:five_prime_UTR |
| CATTTATTTCCTACAATTAC+TGG | 0.270348 | 3_2:-89024372 | None:intergenic |
| CAATCTGGCCAAGCCTTTCT+TGG | 0.284247 | 3_2:+89022921 | Msa0435690:CDS |
| CGATTAATCACAGAATTATC+TGG | 0.285404 | 3_2:+89020412 | Msa0435690:five_prime_UTR |
| TGGGTGATGCTCTGCTGTTT+TGG | 0.327708 | 3_2:+89024037 | Msa0435690:CDS |
| AGGTTCTTCACTATGGAGTT+GGG | 0.328228 | 3_2:+89023704 | Msa0435690:CDS |
| CAGTAATTGTAGGAAATAAA+TGG | 0.333015 | 3_2:+89024373 | Msa0435690:CDS |
| GATTGAGCAGGAGGATATAT+TGG | 0.375242 | 3_2:+89024592 | Msa0435690:intron |
| TGTAGGGTTCGAACTAGTTC+AGG | 0.378613 | 3_2:+89023126 | Msa0435690:intron |
| TAGTCCCTAACCGTGTAAAC+TGG | 0.387706 | 3_2:-89024091 | None:intergenic |
| GGACTTCAGGTTCTTCACTA+TGG | 0.397926 | 3_2:+89023697 | Msa0435690:CDS |
| CAGGTTCTTCACTATGGAGT+TGG | 0.417299 | 3_2:+89023703 | Msa0435690:CDS |
| ATCATCCTTCTTCTTGCGCT+CGG | 0.436354 | 3_2:+89020613 | Msa0435690:CDS |
| AGAGAATGGGGAGGGACTTC+AGG | 0.439161 | 3_2:+89023684 | Msa0435690:intron |
| AGTGGACTGAAATTCTTTCA+TGG | 0.440521 | 3_2:+89020811 | Msa0435690:CDS |
| ATGTGAGCATTTGATCAATC+TGG | 0.447007 | 3_2:+89022906 | Msa0435690:CDS |
| TTTATCTGAATGTGCTAGAA+AGG | 0.451929 | 3_2:+89023993 | Msa0435690:CDS |
| AGGCGGGGAAATAAGTATCT+AGG | 0.457148 | 3_2:+89020361 | None:intergenic |
| GGCGGTTGCCCAGTAATTGT+AGG | 0.473809 | 3_2:+89024363 | Msa0435690:intron |
| CTAAAGTTGGCCTTAGCAGC+AGG | 0.483611 | 3_2:-89023949 | None:intergenic |
| GATGAGTTCAACACTAAGAA+TGG | 0.491873 | 3_2:+89023760 | Msa0435690:CDS |
| GGCCTTAGCAGCAGGAAATA+CGG | 0.495247 | 3_2:-89023941 | None:intergenic |
| AGTGTCGTCGATAGCAAGAC+TGG | 0.497602 | 3_2:+89022952 | Msa0435690:CDS |
| GTATTCCGAGCGCAAGAAGA+AGG | 0.498036 | 3_2:-89020618 | None:intergenic |
| TTTCAGTCCGGCGGAAAAGA+AGG | 0.501427 | 3_2:+89020785 | Msa0435690:intron |
| CGTAGGTCTGACGTTGAAGA+AGG | 0.509166 | 3_2:+89023910 | Msa0435690:intron |
| GACCGTATTTCCTGCTGCTA+AGG | 0.509841 | 3_2:+89023939 | Msa0435690:CDS |
| ACTCATACCTACTGGTATGA+AGG | 0.511725 | 3_2:-89023214 | None:intergenic |
| CGTATGCTTTCCTTTCGCCA+TGG | 0.513545 | 3_2:-89020521 | None:intergenic |
| GATGCATCTAGTGTGGCATC+TGG | 0.515596 | 3_2:-89024069 | None:intergenic |
| ATTTATTTCCTACAATTACT+GGG | 0.516066 | 3_2:-89024371 | None:intergenic |
| GCAAGTACTTCTAGAGACTA+AGG | 0.516340 | 3_2:+89024450 | Msa0435690:three_prime_UTR |
| TCTTAGTGTTGAACTCATCA+AGG | 0.522896 | 3_2:-89023756 | None:intergenic |
| CTGGAAAGAGTACAGAAAGC+AGG | 0.529807 | 3_2:+89022971 | Msa0435690:CDS |
| TTGTGATAGACGAAAGCTCT+AGG | 0.531458 | 3_2:-89020837 | None:intergenic |
| GTGGACTGAAATTCTTTCAT+GGG | 0.532971 | 3_2:+89020812 | Msa0435690:CDS |
| AATTTCTTCACCGGTGAACG+TGG | 0.534743 | 3_2:-89020547 | None:intergenic |
| ATCTGTGATTAAAGAATCAT+CGG | 0.538500 | 3_2:-89020659 | None:intergenic |
| TTATCTGAATGTGCTAGAAA+GGG | 0.543737 | 3_2:+89023994 | Msa0435690:CDS |
| AACGTCGATAATTTCTTCAC+CGG | 0.549802 | 3_2:-89020556 | None:intergenic |
| GTCTCTAGAAGTACTTGCAC+AGG | 0.553082 | 3_2:-89024445 | None:intergenic |
| GGTTCTTCACTATGGAGTTG+GGG | 0.555410 | 3_2:+89023705 | Msa0435690:CDS |
| CCATGGCACAGAACTAAAGT+TGG | 0.560278 | 3_2:-89023962 | None:intergenic |
| GCATACGCATCCACGTTCAC+CGG | 0.560833 | 3_2:+89020537 | Msa0435690:CDS |
| CTAGATGCATCCAGTTTACA+CGG | 0.571154 | 3_2:+89024081 | Msa0435690:CDS |
| TCAGGAATGTTTCTGAAGAG+AGG | 0.571415 | 3_2:+89023144 | Msa0435690:CDS |
| TCAAGGAAGTAATCATAATG+AGG | 0.573011 | 3_2:-89023739 | None:intergenic |
| AATTTCAAAACCATGGCGAA+AGG | 0.592392 | 3_2:+89020511 | Msa0435690:exon |
| TAAGAACTGTTGCAACTCGT+TGG | 0.593280 | 3_2:-89023786 | None:intergenic |
| AAATATGCAGAGAATGGGGA+GGG | 0.595346 | 3_2:+89023676 | Msa0435690:intron |
| CCAACTTTAGTTCTGTGCCA+TGG | 0.601374 | 3_2:+89023962 | Msa0435690:CDS |
| TCAACGCAATTTCAAAACCA+TGG | 0.602891 | 3_2:+89020504 | Msa0435690:exon |
| TAAATATGCAGAGAATGGGG+AGG | 0.604063 | 3_2:+89023675 | Msa0435690:intron |
| AACAAAGTGGATGCATCTTG+AGG | 0.607113 | 3_2:+89024401 | Msa0435690:CDS |
| ATCGACGCAAAATCTATGAA+AGG | 0.610874 | 3_2:+89020680 | Msa0435690:CDS |
| AATGTTTCTGAAGAGAGGAA+AGG | 0.618883 | 3_2:+89023149 | Msa0435690:CDS |
| TGGAATTGGTTTCAGTCCGG+CGG | 0.622476 | 3_2:+89020776 | Msa0435690:intron |
| AAATTATCCAGAATATTGAA+AGG | 0.636890 | 3_2:+89023175 | Msa0435690:CDS |
| ATAAATGGTCTGCAACAAAG+TGG | 0.639282 | 3_2:+89024388 | Msa0435690:CDS |
| GAGTTCAACACTAAGAATGG+AGG | 0.669587 | 3_2:+89023763 | Msa0435690:CDS |
| ACTTTAGTTCTGTGCCATGG+TGG | 0.671859 | 3_2:+89023965 | Msa0435690:CDS |
| CGGCGGAAAAGAAGGAACAG+TGG | 0.698387 | 3_2:+89020793 | Msa0435690:CDS |
| AGGTCTGACGTTGAAGAAGG+CGG | 0.698975 | 3_2:+89023913 | Msa0435690:intron |
| TAAACTGGATGCATCTAGTG+TGG | 0.703325 | 3_2:-89024076 | None:intergenic |
| TCAGATAAATCATTCCACCA+TGG | 0.719207 | 3_2:-89023979 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATACTAATAAAATTGA+AGG | + | chr3_2:89022050-89022069 | Msa0435690:intron | 10.0% |
| !!! | AATTTGTTAATTTGTTAATT+GGG | - | chr3_2:89022149-89022168 | None:intergenic | 10.0% |
| !! | ATATTCTAAATTCACAATTT+AGG | - | chr3_2:89021096-89021115 | None:intergenic | 15.0% |
| !! | AAATACTTATATGAATGATT+AGG | + | chr3_2:89021126-89021145 | Msa0435690:intron | 15.0% |
| !!! | GAATTTGTTAATTTGTTAAT+TGG | - | chr3_2:89022150-89022169 | None:intergenic | 15.0% |
| !! | AAAAAATGATCTACAATTAT+TGG | - | chr3_2:89023031-89023050 | None:intergenic | 15.0% |
| !! | AAACTATTAATCTACTGTTT+AGG | + | chr3_2:89020451-89020470 | Msa0435690:five_prime_UTR | 20.0% |
| !! | AACTATTAATCTACTGTTTA+GGG | + | chr3_2:89020452-89020471 | Msa0435690:five_prime_UTR | 20.0% |
| !!! | TAGTTTTTGTTATCTTTTCA+TGG | + | chr3_2:89020869-89020888 | Msa0435690:intron | 20.0% |
| !! | ATTCATTAAATCAGAAAGAA+AGG | + | chr3_2:89021667-89021686 | Msa0435690:intron | 20.0% |
| !!! | TGAATTTTGAGTAATGTTAA+AGG | - | chr3_2:89021967-89021986 | None:intergenic | 20.0% |
| !!! | AGTGACTTTTATTTCAAATT+AGG | - | chr3_2:89021999-89022018 | None:intergenic | 20.0% |
| !! | CAAAACATTAACAATTAACA+AGG | + | chr3_2:89022116-89022135 | Msa0435690:intron | 20.0% |
| !! | AAATTATCCAGAATATTGAA+AGG | + | chr3_2:89023175-89023194 | Msa0435690:CDS | 20.0% |
| !!! | TTTATTTTTGACAAACACAT+AGG | - | chr3_2:89023580-89023599 | None:intergenic | 20.0% |
| !! | AATTTATGGAAAGAGAATAA+GGG | - | chr3_2:89023824-89023843 | None:intergenic | 20.0% |
| !! | ATTAATTTATCTTTGCTTTC+AGG | + | chr3_2:89024342-89024361 | Msa0435690:intron | 20.0% |
| !! | ATTTATTTCCTACAATTACT+GGG | - | chr3_2:89024374-89024393 | None:intergenic | 20.0% |
| !! | TTATGTTTGACTAGATATAT+AGG | + | chr3_2:89024570-89024589 | Msa0435690:intron | 20.0% |
| ! | ATCTGTGATTAAAGAATCAT+CGG | - | chr3_2:89020662-89020681 | None:intergenic | 25.0% |
| !!! | TTTCGTCTATCACAATTTTT+TGG | + | chr3_2:89020845-89020864 | Msa0435690:intron | 25.0% |
| ! | TTCTTATTGGTCAAAAACAA+TGG | + | chr3_2:89020952-89020971 | Msa0435690:intron | 25.0% |
| ! | ATAATATCAATCAATCGCAA+TGG | + | chr3_2:89021164-89021183 | Msa0435690:intron | 25.0% |
| ! | TAATATCAATCAATCGCAAT+GGG | + | chr3_2:89021165-89021184 | Msa0435690:intron | 25.0% |
| ! | AGAAAACAGAAAACTAACTA+TGG | - | chr3_2:89021358-89021377 | None:intergenic | 25.0% |
| ! | ATGACTCAAATTCAAACAAT+CGG | - | chr3_2:89021455-89021474 | None:intergenic | 25.0% |
| !!! | GCAATAATTAGTTTTCTGTT+TGG | - | chr3_2:89021781-89021800 | None:intergenic | 25.0% |
| !!! | TTTGTTACTTTAAGCTTTAG+AGG | - | chr3_2:89022092-89022111 | None:intergenic | 25.0% |
| !!! | TTGTTAATTTGTTAATTGGG+AGG | - | chr3_2:89022146-89022165 | None:intergenic | 25.0% |
| !! | TGTAATTAAAACCGTTTTCA+GGG | - | chr3_2:89022336-89022355 | None:intergenic | 25.0% |
| !! | TTGTAATTAAAACCGTTTTC+AGG | - | chr3_2:89022337-89022356 | None:intergenic | 25.0% |
| ! | ACTAAATTGTATGAAGATAG+AGG | + | chr3_2:89022649-89022668 | Msa0435690:intron | 25.0% |
| ! | TTCGTGATAAAAGAAAATCT+AGG | + | chr3_2:89022685-89022704 | Msa0435690:intron | 25.0% |
| ! | TAAAAGAAAATCTAGGTACA+TGG | + | chr3_2:89022692-89022711 | Msa0435690:intron | 25.0% |
| ! | TACATGGAATATTCAGATTA+TGG | + | chr3_2:89022708-89022727 | Msa0435690:intron | 25.0% |
| ! | ACAAAAAAAAACTCAAGCAA+AGG | - | chr3_2:89023001-89023020 | None:intergenic | 25.0% |
| !!! | GCTTGAGTTTTTTTTTGTAT+CGG | + | chr3_2:89023003-89023022 | Msa0435690:intron | 25.0% |
| ! | TATATGCAGCAACAAAAAAA+AGG | - | chr3_2:89023291-89023310 | None:intergenic | 25.0% |
| ! | TAAATTTACTGTTTCATGAG+AGG | - | chr3_2:89023455-89023474 | None:intergenic | 25.0% |
| ! | CTCATGAAACAGTAAATTTA+AGG | + | chr3_2:89023455-89023474 | Msa0435690:intron | 25.0% |
| ! | AGTTTCATGAGTTTAGATTT+GGG | - | chr3_2:89023531-89023550 | None:intergenic | 25.0% |
| !! | ACTTTTAAATATGCAGAGAA+TGG | + | chr3_2:89023670-89023689 | Msa0435690:intron | 25.0% |
| !! | CTTTTAAATATGCAGAGAAT+GGG | + | chr3_2:89023671-89023690 | Msa0435690:intron | 25.0% |
| !! | TTTTAAATATGCAGAGAATG+GGG | + | chr3_2:89023672-89023691 | Msa0435690:intron | 25.0% |
| ! | CAATTTATGGAAAGAGAATA+AGG | - | chr3_2:89023825-89023844 | None:intergenic | 25.0% |
| ! | CTTATTCTCTTTCCATAAAT+TGG | + | chr3_2:89023823-89023842 | Msa0435690:intron | 25.0% |
| ! | GGACTATTAAATACTTTAAC+TGG | + | chr3_2:89024108-89024127 | Msa0435690:intron | 25.0% |
| ! | GCTATAATATGTTCAACATA+AGG | - | chr3_2:89024259-89024278 | None:intergenic | 25.0% |
| ! | CATTTATTTCCTACAATTAC+TGG | - | chr3_2:89024375-89024394 | None:intergenic | 25.0% |
| ! | CAGTAATTGTAGGAAATAAA+TGG | + | chr3_2:89024373-89024392 | Msa0435690:CDS | 25.0% |
| !!! | AAATTTTGACCCCTATTTTT+AGG | - | chr3_2:89024492-89024511 | None:intergenic | 25.0% |
| CGATTAATCACAGAATTATC+TGG | + | chr3_2:89020412-89020431 | Msa0435690:five_prime_UTR | 30.0% | |
| !! | TAATCTACTGTTTAGGGTTT+TGG | + | chr3_2:89020458-89020477 | Msa0435690:five_prime_UTR | 30.0% |
| ! | AAAGAATCATCGGTTGTATT+AGG | - | chr3_2:89020652-89020671 | None:intergenic | 30.0% |
| !!! | GTTTGATTTTGATTCTGCTT+TGG | + | chr3_2:89020715-89020734 | Msa0435690:intron | 30.0% |
| !!! | TGTTTTGTTATTGTTGCTTC+TGG | + | chr3_2:89020756-89020775 | Msa0435690:intron | 30.0% |
| AATAAGAAGTGAGAAAACCA+AGG | - | chr3_2:89020940-89020959 | None:intergenic | 30.0% | |
| !! | TTGGTTTTCTCACTTCTTAT+TGG | + | chr3_2:89020939-89020958 | Msa0435690:intron | 30.0% |
| !!! | AACCACTTTTTGACAACTTT+TGG | - | chr3_2:89021032-89021051 | None:intergenic | 30.0% |
| ! | ATTCTATTGTGTTTGGGATT+TGG | - | chr3_2:89021308-89021327 | None:intergenic | 30.0% |
| ! | CAATCGATTCTATTGTGTTT+GGG | - | chr3_2:89021314-89021333 | None:intergenic | 30.0% |
| ! | ACAATCGATTCTATTGTGTT+TGG | - | chr3_2:89021315-89021334 | None:intergenic | 30.0% |
| ATCGATTGTAACTACTAACT+AGG | + | chr3_2:89021326-89021345 | Msa0435690:intron | 30.0% | |
| TCGATTGTAACTACTAACTA+GGG | + | chr3_2:89021327-89021346 | Msa0435690:intron | 30.0% | |
| ! | TTTCTGTTTTCTCTTAGCAT+TGG | + | chr3_2:89021366-89021385 | Msa0435690:intron | 30.0% |
| TGACTCAAATTCAAACAATC+GGG | - | chr3_2:89021454-89021473 | None:intergenic | 30.0% | |
| !!! | TAAACGGTTTTGGAATGAAT+AGG | + | chr3_2:89021635-89021654 | Msa0435690:intron | 30.0% |
| AAAGGAAGATACAACTTCTA+TGG | + | chr3_2:89021685-89021704 | Msa0435690:intron | 30.0% | |
| TACAAAAATGACCCTGAAAA+CGG | + | chr3_2:89022352-89022371 | Msa0435690:intron | 30.0% | |
| ATGATATTGCATATTCGTCA+AGG | + | chr3_2:89022571-89022590 | Msa0435690:intron | 30.0% | |
| !! | TATTTCTTTGAAGTCTTGTG+TGG | + | chr3_2:89022811-89022830 | Msa0435690:intron | 30.0% |
| TCAAGAAAAGGTTTATGGAA+AGG | - | chr3_2:89023058-89023077 | None:intergenic | 30.0% | |
| CAATTCTCCTTTCAATATTC+TGG | - | chr3_2:89023185-89023204 | None:intergenic | 30.0% | |
| AAGAACTTAGTCAGAAACAT+TGG | + | chr3_2:89023374-89023393 | Msa0435690:intron | 30.0% | |
| CAGTTTCATGAGTTTAGATT+TGG | - | chr3_2:89023532-89023551 | None:intergenic | 30.0% | |
| !!! | ACATAGGTTTTAGAACTACT+TGG | - | chr3_2:89023564-89023583 | None:intergenic | 30.0% |
| TCAAGGAAGTAATCATAATG+AGG | - | chr3_2:89023742-89023761 | None:intergenic | 30.0% | |
| TCTCTTTCCATAAATTGGTT+TGG | + | chr3_2:89023828-89023847 | Msa0435690:intron | 30.0% | |
| TTTATCTGAATGTGCTAGAA+AGG | + | chr3_2:89023993-89024012 | Msa0435690:CDS | 30.0% | |
| TTATCTGAATGTGCTAGAAA+GGG | + | chr3_2:89023994-89024013 | Msa0435690:CDS | 30.0% | |
| TCTATCACTGAAACCAAAAA+TGG | + | chr3_2:89024017-89024036 | Msa0435690:CDS | 30.0% | |
| CTATCACTGAAACCAAAAAT+GGG | + | chr3_2:89024018-89024037 | Msa0435690:CDS | 30.0% | |
| ATTCAAGGAGGTCAAAAAAT+AGG | - | chr3_2:89024193-89024212 | None:intergenic | 30.0% | |
| CAAACATATCTCATGATTCA+AGG | - | chr3_2:89024208-89024227 | None:intergenic | 30.0% | |
| ! | TGTTTGACGTTTGTACATTT+TGG | + | chr3_2:89024222-89024241 | Msa0435690:intron | 30.0% |
| AATGTAATGAGTTAGTGACA+TGG | - | chr3_2:89024281-89024300 | None:intergenic | 30.0% | |
| TCATTACATTCCAATTCCAT+TGG | + | chr3_2:89024291-89024310 | Msa0435690:intron | 30.0% | |
| CTTCTAATTTCCAATGGAAT+TGG | - | chr3_2:89024304-89024323 | None:intergenic | 30.0% | |
| TCAAAGCTTCTAATTTCCAA+TGG | - | chr3_2:89024310-89024329 | None:intergenic | 30.0% | |
| AATTTATCTTTGCTTTCAGG+CGG | + | chr3_2:89024345-89024364 | Msa0435690:intron | 30.0% | |
| TCGATTGTTCTCCTAAAAAT+AGG | + | chr3_2:89024478-89024497 | Msa0435690:three_prime_UTR | 30.0% | |
| CGATTGTTCTCCTAAAAATA+GGG | + | chr3_2:89024479-89024498 | Msa0435690:three_prime_UTR | 30.0% | |
| GATTGTTCTCCTAAAAATAG+GGG | + | chr3_2:89024480-89024499 | Msa0435690:three_prime_UTR | 30.0% | |
| ! | TAACTGAGAACTGAGATTTT+AGG | - | chr3_2:89024553-89024572 | None:intergenic | 30.0% |
| TCAACGCAATTTCAAAACCA+TGG | + | chr3_2:89020504-89020523 | Msa0435690:exon | 35.0% | |
| AATTTCAAAACCATGGCGAA+AGG | + | chr3_2:89020511-89020530 | Msa0435690:exon | 35.0% | |
| AACGTCGATAATTTCTTCAC+CGG | - | chr3_2:89020559-89020578 | None:intergenic | 35.0% | |
| ATCGACGCAAAATCTATGAA+AGG | + | chr3_2:89020680-89020699 | Msa0435690:CDS | 35.0% | |
| !! | GTTATTGTTGCTTCTGGAAT+TGG | + | chr3_2:89020762-89020781 | Msa0435690:intron | 35.0% |
| !! | AGTGGACTGAAATTCTTTCA+TGG | + | chr3_2:89020811-89020830 | Msa0435690:CDS | 35.0% |
| ! | GTGGACTGAAATTCTTTCAT+GGG | + | chr3_2:89020812-89020831 | Msa0435690:CDS | 35.0% |
| !! | CATCAATTTGTTGACAACCT+TGG | + | chr3_2:89020920-89020939 | Msa0435690:intron | 35.0% |
| GTCCAAAAGTTGTCAAAAAG+TGG | + | chr3_2:89021027-89021046 | Msa0435690:intron | 35.0% | |
| AGCATAAAGTGGGAAAATGA+GGG | - | chr3_2:89021267-89021286 | None:intergenic | 35.0% | |
| ACTCAAATTCAAACAATCGG+GGG | - | chr3_2:89021452-89021471 | None:intergenic | 35.0% | |
| GACTCAAATTCAAACAATCG+GGG | - | chr3_2:89021453-89021472 | None:intergenic | 35.0% | |
| GTTGTTCAAATTTCTCACCA+TGG | + | chr3_2:89021479-89021498 | Msa0435690:intron | 35.0% | |
| AAGATGAAAGCAAGATTCTC+AGG | + | chr3_2:89021529-89021548 | Msa0435690:intron | 35.0% | |
| AGATGAAAGCAAGATTCTCA+GGG | + | chr3_2:89021530-89021549 | Msa0435690:intron | 35.0% | |
| ! | GTGTGAGAAATTTTCTCTGA+AGG | - | chr3_2:89021608-89021627 | None:intergenic | 35.0% |
| AGTTTGAGAGTTAGATTAGC+TGG | - | chr3_2:89021726-89021745 | None:intergenic | 35.0% | |
| ! | GTTTGGTTGTTACTTCAGTA+AGG | - | chr3_2:89021764-89021783 | None:intergenic | 35.0% |
| TACAATCAAGAGATGAAGAG+AGG | + | chr3_2:89022206-89022225 | Msa0435690:intron | 35.0% | |
| ! | GTCACTTAAAACCGTTTTCA+GGG | - | chr3_2:89022314-89022333 | None:intergenic | 35.0% |
| !! | GTTTTAAGTGACCCTGAAAA+CGG | + | chr3_2:89022322-89022341 | Msa0435690:intron | 35.0% |
| ! | TTCCCTTAAAACCGTTTTCA+GGG | - | chr3_2:89022366-89022385 | None:intergenic | 35.0% |
| ! | TTTCCCTTAAAACCGTTTTC+AGG | - | chr3_2:89022367-89022386 | None:intergenic | 35.0% |
| CTTGTAAAGTCTGTAAGCAT+AGG | + | chr3_2:89022611-89022630 | Msa0435690:intron | 35.0% | |
| ATGAAGATAGAGGTTGTTCT+AGG | + | chr3_2:89022659-89022678 | Msa0435690:intron | 35.0% | |
| TTTGGACTGTTCACAATGAT+AGG | - | chr3_2:89022881-89022900 | None:intergenic | 35.0% | |
| CAAATGCTCACATTCTTCTT+TGG | - | chr3_2:89022899-89022918 | None:intergenic | 35.0% | |
| ATGTGAGCATTTGATCAATC+TGG | + | chr3_2:89022906-89022925 | Msa0435690:CDS | 35.0% | |
| ! | ACACTTGATTTTGCCAAGAA+AGG | - | chr3_2:89022937-89022956 | None:intergenic | 35.0% |
| GTCTCTCAAGAAAAGGTTTA+TGG | - | chr3_2:89023063-89023082 | None:intergenic | 35.0% | |
| ! | AATGTTTCTGAAGAGAGGAA+AGG | + | chr3_2:89023149-89023168 | Msa0435690:CDS | 35.0% |
| ! | GATTTTACCTTCATACCAGT+AGG | + | chr3_2:89023207-89023226 | Msa0435690:CDS | 35.0% |
| AAAAAAGGCTACGAGACAAA+GGG | - | chr3_2:89023276-89023295 | None:intergenic | 35.0% | |
| AAAAAAAGGCTACGAGACAA+AGG | - | chr3_2:89023277-89023296 | None:intergenic | 35.0% | |
| TTTCTGACTAAGTTCTTGAG+AGG | - | chr3_2:89023371-89023390 | None:intergenic | 35.0% | |
| ! | TATCTCAATGTGTCGGTAAT+TGG | + | chr3_2:89023428-89023447 | Msa0435690:intron | 35.0% |
| ! | TCTTAGTGTTGAACTCATCA+AGG | - | chr3_2:89023759-89023778 | None:intergenic | 35.0% |
| GATGAGTTCAACACTAAGAA+TGG | + | chr3_2:89023760-89023779 | Msa0435690:CDS | 35.0% | |
| TCAGATAAATCATTCCACCA+TGG | - | chr3_2:89023982-89024001 | None:intergenic | 35.0% | |
| ACATATCTCATGATTCAAGG+AGG | - | chr3_2:89024205-89024224 | None:intergenic | 35.0% | |
| !!! | TTGTACATTTTGGTACTGAC+TGG | + | chr3_2:89024232-89024251 | Msa0435690:intron | 35.0% |
| ATAAATGGTCTGCAACAAAG+TGG | + | chr3_2:89024388-89024407 | Msa0435690:CDS | 35.0% | |
| ! | CTTGAGGAGTACAAAGTTTA+AGG | + | chr3_2:89024417-89024436 | Msa0435690:CDS | 35.0% |
| CTAGATATATAGGATTGAGC+AGG | + | chr3_2:89024580-89024599 | Msa0435690:intron | 35.0% | |
| !! | TTCTGGAATTGGTTTCAGTC+CGG | + | chr3_2:89020773-89020792 | Msa0435690:intron | 40.0% |
| TTGTGATAGACGAAAGCTCT+AGG | - | chr3_2:89020840-89020859 | None:intergenic | 40.0% | |
| ! | AATCGCAATGGGTTCACTAA+TGG | + | chr3_2:89021176-89021195 | Msa0435690:intron | 40.0% |
| GAGCATAAAGTGGGAAAATG+AGG | - | chr3_2:89021268-89021287 | None:intergenic | 40.0% | |
| AGGTGAGTAGAGCATAAAGT+GGG | - | chr3_2:89021277-89021296 | None:intergenic | 40.0% | |
| AAGGTGAGTAGAGCATAAAG+TGG | - | chr3_2:89021278-89021297 | None:intergenic | 40.0% | |
| !! | GAAGAACTGGTTTGAGTTTG+TGG | - | chr3_2:89021403-89021422 | None:intergenic | 40.0% |
| ATGGATGAGGAATGAAGAAC+TGG | - | chr3_2:89021416-89021435 | None:intergenic | 40.0% | |
| GAAACTATCATGGATGGATG+AGG | - | chr3_2:89021429-89021448 | None:intergenic | 40.0% | |
| CTCAAATTCAAACAATCGGG+GGG | - | chr3_2:89021451-89021470 | None:intergenic | 40.0% | |
| TTTACTTTGATCGAGCTCCA+TGG | - | chr3_2:89021499-89021518 | None:intergenic | 40.0% | |
| !! | TTTCTCTGAAGGTATCAGAG+CGG | - | chr3_2:89021597-89021616 | None:intergenic | 40.0% |
| CAGAGAAAATTTCTCACACC+TGG | + | chr3_2:89021609-89021628 | Msa0435690:intron | 40.0% | |
| ! | GGTTGTTACTTCAGTAAGGT+TGG | - | chr3_2:89021760-89021779 | None:intergenic | 40.0% |
| !! | GCTTTAGAGGCTTAAAGTGT+TGG | - | chr3_2:89022079-89022098 | None:intergenic | 40.0% |
| TGAAGAGAGGAGAACAAAGA+TGG | + | chr3_2:89022219-89022238 | Msa0435690:intron | 40.0% | |
| GAAGAGAGGAGAACAAAGAT+GGG | + | chr3_2:89022220-89022239 | Msa0435690:intron | 40.0% | |
| AGAGATGATGAGATGAGAAG+AGG | + | chr3_2:89022287-89022306 | Msa0435690:intron | 40.0% | |
| ! | GGTCACTTAAAACCGTTTTC+AGG | - | chr3_2:89022315-89022334 | None:intergenic | 40.0% |
| ! | TGACCCTGAAAACGGTTTTA+AGG | + | chr3_2:89022330-89022349 | Msa0435690:intron | 40.0% |
| !! | GACCCTGAAAACGGTTTTAA+GGG | + | chr3_2:89022309-89022328 | Msa0435690:intron | 40.0% |
| ! | AGTAGCTCTGTTGTCAATAG+AGG | - | chr3_2:89022501-89022520 | None:intergenic | 40.0% |
| AAAGTCTGTAAGCATAGGCT+AGG | + | chr3_2:89022616-89022635 | Msa0435690:intron | 40.0% | |
| ! | AAGATAGAGGTTGTTCTAGG+TGG | + | chr3_2:89022662-89022681 | Msa0435690:intron | 40.0% |
| TAAGACTCCAGAGTTTGAGT+AGG | + | chr3_2:89022748-89022767 | Msa0435690:intron | 40.0% | |
| AAGATCTCCTACTCAAACTC+TGG | - | chr3_2:89022758-89022777 | None:intergenic | 40.0% | |
| CTTGTGTGGTAGTAAACTGT+TGG | + | chr3_2:89022825-89022844 | Msa0435690:intron | 40.0% | |
| ! | TGATTTTGCCAAGAAAGGCT+TGG | - | chr3_2:89022932-89022951 | None:intergenic | 40.0% |
| ! | GACACTAGTCTCTCAAGAAA+AGG | - | chr3_2:89023070-89023089 | None:intergenic | 40.0% |
| TAGATATATCCCCTTCCTGT+AGG | + | chr3_2:89023109-89023128 | Msa0435690:intron | 40.0% | |
| AGATATATCCCCTTCCTGTA+GGG | + | chr3_2:89023110-89023129 | Msa0435690:intron | 40.0% | |
| ! | TCAGGAATGTTTCTGAAGAG+AGG | + | chr3_2:89023144-89023163 | Msa0435690:CDS | 40.0% |
| ACTCATACCTACTGGTATGA+AGG | - | chr3_2:89023217-89023236 | None:intergenic | 40.0% | |
| GCACAAAAACTCATACCTAC+TGG | - | chr3_2:89023225-89023244 | None:intergenic | 40.0% | |
| GACAGTCTATCTCAATGTGT+CGG | + | chr3_2:89023421-89023440 | Msa0435690:intron | 40.0% | |
| TCTGTATCCAGCTACATGAT+TGG | + | chr3_2:89023616-89023635 | Msa0435690:intron | 40.0% | |
| CAAACAACCAATCATGTAGC+TGG | - | chr3_2:89023626-89023645 | None:intergenic | 40.0% | |
| TAAATATGCAGAGAATGGGG+AGG | + | chr3_2:89023675-89023694 | Msa0435690:intron | 40.0% | |
| AAATATGCAGAGAATGGGGA+GGG | + | chr3_2:89023676-89023695 | Msa0435690:intron | 40.0% | |
| AGGTTCTTCACTATGGAGTT+GGG | + | chr3_2:89023704-89023723 | Msa0435690:CDS | 40.0% | |
| GAGTTCAACACTAAGAATGG+AGG | + | chr3_2:89023763-89023782 | Msa0435690:CDS | 40.0% | |
| TAAGAACTGTTGCAACTCGT+TGG | - | chr3_2:89023789-89023808 | None:intergenic | 40.0% | |
| CACACTGCCAAACCAATTTA+TGG | - | chr3_2:89023838-89023857 | None:intergenic | 40.0% | |
| CTACGTAAGGAGCAAAAAGA+GGG | - | chr3_2:89023895-89023914 | None:intergenic | 40.0% | |
| TAAACTGGATGCATCTAGTG+TGG | - | chr3_2:89024079-89024098 | None:intergenic | 40.0% | |
| CTAGATGCATCCAGTTTACA+CGG | + | chr3_2:89024081-89024100 | Msa0435690:CDS | 40.0% | |
| AACAAAGTGGATGCATCTTG+AGG | + | chr3_2:89024401-89024420 | Msa0435690:CDS | 40.0% | |
| ! | GCAAGTACTTCTAGAGACTA+AGG | + | chr3_2:89024450-89024469 | Msa0435690:three_prime_UTR | 40.0% |
| GATATATAGGATTGAGCAGG+AGG | + | chr3_2:89024583-89024602 | Msa0435690:intron | 40.0% | |
| GATTGAGCAGGAGGATATAT+TGG | + | chr3_2:89024592-89024611 | Msa0435690:intron | 40.0% | |
| AATTTCTTCACCGGTGAACG+TGG | - | chr3_2:89020550-89020569 | None:intergenic | 45.0% | |
| ATCATCCTTCTTCTTGCGCT+CGG | + | chr3_2:89020613-89020632 | Msa0435690:CDS | 45.0% | |
| TTATGCTCTACTCACCTTCG+AGG | + | chr3_2:89021280-89021299 | Msa0435690:intron | 45.0% | |
| ! | TTTGGGATTTGGATCCTCGA+AGG | - | chr3_2:89021297-89021316 | None:intergenic | 45.0% |
| !! | TTCTCTGAAGGTATCAGAGC+GGG | - | chr3_2:89021596-89021615 | None:intergenic | 45.0% |
| ! | TTCTCACACCTGGTGCTAAA+CGG | + | chr3_2:89021619-89021638 | Msa0435690:intron | 45.0% |
| TTCCAAAACCGTTTAGCACC+AGG | - | chr3_2:89021630-89021649 | None:intergenic | 45.0% | |
| GTTACTTCAGTAAGGTTGGC+TGG | - | chr3_2:89021756-89021775 | None:intergenic | 45.0% | |
| TCACACCTCTGTTGTCAAAG+CGG | + | chr3_2:89021804-89021823 | Msa0435690:intron | 45.0% | |
| CATTTCCGCTTTGACAACAG+AGG | - | chr3_2:89021812-89021831 | None:intergenic | 45.0% | |
| CTGTTGTCAAAGCGGAAATG+CGG | + | chr3_2:89021812-89021831 | Msa0435690:intron | 45.0% | |
| TCTGCAGATGAGATGAGAAG+AGG | + | chr3_2:89022244-89022263 | Msa0435690:intron | 45.0% | |
| TGAGATGAGAAGAGGAGAGA+TGG | + | chr3_2:89022252-89022271 | Msa0435690:intron | 45.0% | |
| GAGATGAGAAGAGGAGAGAT+GGG | + | chr3_2:89022253-89022272 | Msa0435690:intron | 45.0% | |
| TGAGAAGAGGACCCTGAAAA+CGG | + | chr3_2:89022300-89022319 | Msa0435690:intron | 45.0% | |
| !!! | GCGTCGCGTTTTACTGATTT+TGG | + | chr3_2:89022455-89022474 | Msa0435690:intron | 45.0% |
| TTGTCAATAGAGGCCACTAC+TGG | - | chr3_2:89022491-89022510 | None:intergenic | 45.0% | |
| ! | CTGGAAAGAGTACAGAAAGC+AGG | + | chr3_2:89022971-89022990 | Msa0435690:CDS | 45.0% |
| CTTGAGAGACTAGTGTCTAG+TGG | + | chr3_2:89023073-89023092 | Msa0435690:intron | 45.0% | |
| TAGTTCGAACCCTACAGGAA+GGG | - | chr3_2:89023122-89023141 | None:intergenic | 45.0% | |
| TGAACTAGTTCGAACCCTAC+AGG | - | chr3_2:89023127-89023146 | None:intergenic | 45.0% | |
| TGTAGGGTTCGAACTAGTTC+AGG | + | chr3_2:89023126-89023145 | Msa0435690:intron | 45.0% | |
| GTAGCTGGATACAGAGTGAT+TGG | - | chr3_2:89023611-89023630 | None:intergenic | 45.0% | |
| ! | GGACTTCAGGTTCTTCACTA+TGG | + | chr3_2:89023697-89023716 | Msa0435690:CDS | 45.0% |
| CAGGTTCTTCACTATGGAGT+TGG | + | chr3_2:89023703-89023722 | Msa0435690:CDS | 45.0% | |
| GGTTCTTCACTATGGAGTTG+GGG | + | chr3_2:89023705-89023724 | Msa0435690:CDS | 45.0% | |
| TTTGGCAGTGTGCTTTGTGA+TGG | + | chr3_2:89023846-89023865 | Msa0435690:intron | 45.0% | |
| AAAAGAGGGAGCTGTCAAGT+TGG | - | chr3_2:89023881-89023900 | None:intergenic | 45.0% | |
| CCTACGTAAGGAGCAAAAAG+AGG | - | chr3_2:89023896-89023915 | None:intergenic | 45.0% | |
| ! | CCTCTTTTTGCTCCTTACGT+AGG | + | chr3_2:89023893-89023912 | Msa0435690:intron | 45.0% |
| TTCAACGTCAGACCTACGTA+AGG | - | chr3_2:89023908-89023927 | None:intergenic | 45.0% | |
| CCATGGCACAGAACTAAAGT+TGG | - | chr3_2:89023965-89023984 | None:intergenic | 45.0% | |
| !! | CCAACTTTAGTTCTGTGCCA+TGG | + | chr3_2:89023962-89023981 | Msa0435690:CDS | 45.0% |
| !! | ACTTTAGTTCTGTGCCATGG+TGG | + | chr3_2:89023965-89023984 | Msa0435690:CDS | 45.0% |
| !! | AGCAGAGCATCACCCATTTT+TGG | - | chr3_2:89024033-89024052 | None:intergenic | 45.0% |
| TGCATCCAGTTTACACGGTT+AGG | + | chr3_2:89024086-89024105 | Msa0435690:intron | 45.0% | |
| GCATCCAGTTTACACGGTTA+GGG | + | chr3_2:89024087-89024106 | Msa0435690:intron | 45.0% | |
| TAGTCCCTAACCGTGTAAAC+TGG | - | chr3_2:89024094-89024113 | None:intergenic | 45.0% | |
| !! | GTCTCTAGAAGTACTTGCAC+AGG | - | chr3_2:89024448-89024467 | None:intergenic | 45.0% |
| CGTATGCTTTCCTTTCGCCA+TGG | - | chr3_2:89020524-89020543 | None:intergenic | 50.0% | |
| GTATTCCGAGCGCAAGAAGA+AGG | - | chr3_2:89020621-89020640 | None:intergenic | 50.0% | |
| ! | TGGAATTGGTTTCAGTCCGG+CGG | + | chr3_2:89020776-89020795 | Msa0435690:intron | 50.0% |
| TTTCAGTCCGGCGGAAAAGA+AGG | + | chr3_2:89020785-89020804 | Msa0435690:intron | 50.0% | |
| ! | CACTGTTCCTTCTTTTCCGC+CGG | - | chr3_2:89020795-89020814 | None:intergenic | 50.0% |
| CAATCGGGGGGAAACTATCA+TGG | - | chr3_2:89021439-89021458 | None:intergenic | 50.0% | |
| TGTGCTTCAGCAACGCTGTT+AGG | - | chr3_2:89021563-89021582 | None:intergenic | 50.0% | |
| !! | CACCTGGTGCTAAACGGTTT+TGG | + | chr3_2:89021625-89021644 | Msa0435690:intron | 50.0% |
| TTTGGAGAAAGCGGCTGAAG+CGG | - | chr3_2:89022416-89022435 | None:intergenic | 50.0% | |
| TTTCTCCAAATGCTCCGCCT+TGG | + | chr3_2:89022426-89022445 | Msa0435690:intron | 50.0% | |
| GTAAGCATAGGCTAGGCTCA+TGG | + | chr3_2:89022623-89022642 | Msa0435690:intron | 50.0% | |
| CAATCTGGCCAAGCCTTTCT+TGG | + | chr3_2:89022921-89022940 | Msa0435690:CDS | 50.0% | |
| AGTGTCGTCGATAGCAAGAC+TGG | + | chr3_2:89022952-89022971 | Msa0435690:CDS | 50.0% | |
| AGTTCGAACCCTACAGGAAG+GGG | - | chr3_2:89023121-89023140 | None:intergenic | 50.0% | |
| CTAGTTCGAACCCTACAGGA+AGG | - | chr3_2:89023123-89023142 | None:intergenic | 50.0% | |
| ACAAAGGGAAAGAGGCAAGC+AGG | - | chr3_2:89023261-89023280 | None:intergenic | 50.0% | |
| GCTACGAGACAAAGGGAAAG+AGG | - | chr3_2:89023269-89023288 | None:intergenic | 50.0% | |
| CGTAGGTCTGACGTTGAAGA+AGG | + | chr3_2:89023910-89023929 | Msa0435690:intron | 50.0% | |
| AGGTCTGACGTTGAAGAAGG+CGG | + | chr3_2:89023913-89023932 | Msa0435690:intron | 50.0% | |
| GACCGTATTTCCTGCTGCTA+AGG | + | chr3_2:89023939-89023958 | Msa0435690:CDS | 50.0% | |
| GGCCTTAGCAGCAGGAAATA+CGG | - | chr3_2:89023944-89023963 | None:intergenic | 50.0% | |
| !! | CTAAAGTTGGCCTTAGCAGC+AGG | - | chr3_2:89023952-89023971 | None:intergenic | 50.0% |
| !! | TGGGTGATGCTCTGCTGTTT+TGG | + | chr3_2:89024037-89024056 | Msa0435690:CDS | 50.0% |
| !!! | CTCTGCTGTTTTGGAGCATG+AGG | + | chr3_2:89024046-89024065 | Msa0435690:CDS | 50.0% |
| GATGCATCTAGTGTGGCATC+TGG | - | chr3_2:89024072-89024091 | None:intergenic | 50.0% | |
| GCATACGCATCCACGTTCAC+CGG | + | chr3_2:89020537-89020556 | Msa0435690:CDS | 55.0% | |
| CGGCGGAAAAGAAGGAACAG+TGG | + | chr3_2:89020793-89020812 | Msa0435690:CDS | 55.0% | |
| CGGGGGGAAACTATCATGGA+TGG | - | chr3_2:89021435-89021454 | None:intergenic | 55.0% | |
| CAGCGTTGCTGAAGCACAAC+AGG | + | chr3_2:89021565-89021584 | Msa0435690:intron | 55.0% | |
| GTCAAAGCGGAAATGCGGTG+TGG | + | chr3_2:89021817-89021836 | Msa0435690:intron | 55.0% | |
| GGCCACCCCAAAAATTGACG+TGG | + | chr3_2:89021843-89021862 | Msa0435690:intron | 55.0% | |
| !! | CGCCACGTCAATTTTTGGGG+TGG | - | chr3_2:89021848-89021867 | None:intergenic | 55.0% |
| ! | CCGCGCCACGTCAATTTTTG+GGG | - | chr3_2:89021851-89021870 | None:intergenic | 55.0% |
| CCCCAAAAATTGACGTGGCG+CGG | + | chr3_2:89021848-89021867 | Msa0435690:intron | 55.0% | |
| ! | CCCGCGCCACGTCAATTTTT+GGG | - | chr3_2:89021852-89021871 | None:intergenic | 55.0% |
| CCCAAAAATTGACGTGGCGC+GGG | + | chr3_2:89021849-89021868 | Msa0435690:intron | 55.0% | |
| ! | TCCCGCGCCACGTCAATTTT+TGG | - | chr3_2:89021853-89021872 | None:intergenic | 55.0% |
| ACGCGTAGCAGGCGCTATTT+CGG | + | chr3_2:89021878-89021897 | Msa0435690:intron | 55.0% | |
| TTGGAGAAAGCGGCTGAAGC+GGG | - | chr3_2:89022415-89022434 | None:intergenic | 55.0% | |
| ! | GGCGGAGCATTTGGAGAAAG+CGG | - | chr3_2:89022425-89022444 | None:intergenic | 55.0% |
| AGAGAATGGGGAGGGACTTC+AGG | + | chr3_2:89023684-89023703 | Msa0435690:intron | 55.0% | |
| GGCGGTTGCCCAGTAATTGT+AGG | + | chr3_2:89024363-89024382 | Msa0435690:intron | 55.0% | |
| AGCGGAAATGCGGTGTGGCA+CGG | + | chr3_2:89021822-89021841 | Msa0435690:intron | 60.0% | |
| AATTGACGTGGCGCGGGATG+CGG | + | chr3_2:89021855-89021874 | Msa0435690:intron | 60.0% | |
| ! | CGTAGCAGGCGCTATTTCGG+TGG | + | chr3_2:89021881-89021900 | Msa0435690:intron | 60.0% |
| GGGCGCGATGCAGGTAAAAG+CGG | - | chr3_2:89022395-89022414 | None:intergenic | 60.0% | |
| ! | GCGCTCCAAGGCGGAGCATT+TGG | - | chr3_2:89022434-89022453 | None:intergenic | 65.0% |
| AAACGCGACGCAGCGCTCCA+AGG | - | chr3_2:89022446-89022465 | None:intergenic | 65.0% | |
| AGGCCACTACTGGCGCAGAG+CGG | - | chr3_2:89022481-89022500 | None:intergenic | 65.0% | |
| TGGCCGCTCTGCGCCAGTAG+TGG | + | chr3_2:89022475-89022494 | Msa0435690:intron | 70.0% | |
| GCGGGATGCGGACGCGTAGC+AGG | + | chr3_2:89021867-89021886 | Msa0435690:intron | 75.0% | |
| GGCTGAAGCGGGCGCGATGC+AGG | - | chr3_2:89022404-89022423 | None:intergenic | 75.0% | |
| CGCGACGCAGCGCTCCAAGG+CGG | - | chr3_2:89022443-89022462 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 89020364 | 89024657 | 89020364 | ID=Msa0435690;Name=Msa0435690 |
| chr3_2 | mRNA | 89020364 | 89024657 | 89020364 | ID=Msa0435690-mRNA-1;Parent=Msa0435690;Name=Msa0435690-mRNA-1;_AED=0.19;_eAED=0.19;_QI=159|0.85|0.87|1|0.85|0.75|8|185|274 |
| chr3_2 | exon | 89020364 | 89020701 | 89020364 | ID=Msa0435690-mRNA-1:exon:26279;Parent=Msa0435690-mRNA-1 |
| chr3_2 | exon | 89020791 | 89020848 | 89020791 | ID=Msa0435690-mRNA-1:exon:26280;Parent=Msa0435690-mRNA-1 |
| chr3_2 | exon | 89022895 | 89022992 | 89022895 | ID=Msa0435690-mRNA-1:exon:26281;Parent=Msa0435690-mRNA-1 |
| chr3_2 | exon | 89023131 | 89023228 | 89023131 | ID=Msa0435690-mRNA-1:exon:26282;Parent=Msa0435690-mRNA-1 |
| chr3_2 | exon | 89023686 | 89023815 | 89023686 | ID=Msa0435690-mRNA-1:exon:26283;Parent=Msa0435690-mRNA-1 |
| chr3_2 | exon | 89023915 | 89024102 | 89023915 | ID=Msa0435690-mRNA-1:exon:26284;Parent=Msa0435690-mRNA-1 |
| chr3_2 | exon | 89024364 | 89024569 | 89024364 | ID=Msa0435690-mRNA-1:exon:26285;Parent=Msa0435690-mRNA-1 |
| chr3_2 | exon | 89024605 | 89024657 | 89024605 | ID=Msa0435690-mRNA-1:exon:26286;Parent=Msa0435690-mRNA-1 |
| chr3_2 | five_prime_UTR | 89020364 | 89020522 | 89020364 | ID=Msa0435690-mRNA-1:five_prime_utr;Parent=Msa0435690-mRNA-1 |
| chr3_2 | CDS | 89020523 | 89020701 | 89020523 | ID=Msa0435690-mRNA-1:cds;Parent=Msa0435690-mRNA-1 |
| chr3_2 | CDS | 89020791 | 89020848 | 89020791 | ID=Msa0435690-mRNA-1:cds;Parent=Msa0435690-mRNA-1 |
| chr3_2 | CDS | 89022895 | 89022992 | 89022895 | ID=Msa0435690-mRNA-1:cds;Parent=Msa0435690-mRNA-1 |
| chr3_2 | CDS | 89023131 | 89023228 | 89023131 | ID=Msa0435690-mRNA-1:cds;Parent=Msa0435690-mRNA-1 |
| chr3_2 | CDS | 89023686 | 89023815 | 89023686 | ID=Msa0435690-mRNA-1:cds;Parent=Msa0435690-mRNA-1 |
| chr3_2 | CDS | 89023915 | 89024102 | 89023915 | ID=Msa0435690-mRNA-1:cds;Parent=Msa0435690-mRNA-1 |
| chr3_2 | CDS | 89024364 | 89024437 | 89024364 | ID=Msa0435690-mRNA-1:cds;Parent=Msa0435690-mRNA-1 |
| chr3_2 | three_prime_UTR | 89024438 | 89024569 | 89024438 | ID=Msa0435690-mRNA-1:three_prime_utr;Parent=Msa0435690-mRNA-1 |
| chr3_2 | three_prime_UTR | 89024605 | 89024657 | 89024605 | ID=Msa0435690-mRNA-1:three_prime_utr;Parent=Msa0435690-mRNA-1 |
| Gene Sequence |
| Protein sequence |
