AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1358670


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1358670 MtrunA17_Chr3g0143381 96.429 280 4 1 1 274 1 280 0.0 552
Msa1358670 MtrunA17_Chr5g0406051 63.918 291 86 4 1 274 1 289 2.09e-135 384
Msa1358670 MtrunA17_Chr8g0371221 59.929 282 101 4 1 274 1 278 1.73e-117 338
Msa1358670 MtrunA17_Chr8g0371251 59.712 278 103 3 5 274 3 279 1.40e-116 335
Msa1358670 MtrunA17_Chr8g0371281 69.444 216 60 1 63 272 60 275 2.26e-115 332
Msa1358670 MtrunA17_Chr8g0371231 68.912 193 60 0 80 272 9 201 3.09e-102 296
Msa1358670 MtrunA17_Chr3g0143361 71.111 180 46 1 95 274 1 174 4.05e-90 265
Msa1358670 MtrunA17_Chr6g0452281 53.333 240 104 3 40 273 23 260 4.74e-83 251
Msa1358670 MtrunA17_Chr8g0371241 64.912 171 44 1 99 269 4 158 1.91e-80 240
Msa1358670 MtrunA17_Chr2g0286811 47.471 257 112 4 27 272 9 253 7.14e-76 233
Msa1358670 MtrunA17_Chr4g0066531 53.589 209 89 2 72 272 40 248 2.11e-74 229
Msa1358670 MtrunA17_Chr3g0143371 65.605 157 49 1 95 251 1 152 1.59e-69 211
Msa1358670 MtrunA17_Chr3g0143351 61.202 183 58 3 95 274 1 173 2.56e-66 204
Msa1358670 MtrunA17_Chr1g0213811 51.185 211 79 4 70 267 76 275 3.14e-64 202
Msa1358670 MtrunA17_Chr4g0053801 45.498 211 96 9 70 268 86 289 1.85e-51 170
Msa1358670 MtrunA17_Chr5g0401481 39.286 224 105 7 70 267 84 302 5.80e-42 146
Msa1358670 MtrunA17_Chr6g0470551 33.716 261 145 9 16 270 3 241 4.97e-33 122
Msa1358670 MtrunA17_Chr3g0098671 70.588 68 18 2 145 211 31 97 5.68e-24 93.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1358670 AT1G20270.1 67.128 289 78 4 1 274 1 287 6.78e-142 400
Msa1358670 AT5G66060.1 64.583 288 88 3 1 274 2 289 5.97e-136 385
Msa1358670 AT2G17720.1 65.992 247 70 3 42 274 45 291 8.15e-121 347
Msa1358670 AT4G35810.1 58.824 289 102 2 1 272 1 289 7.55e-118 340
Msa1358670 AT4G35810.2 58.824 289 102 2 1 272 1 289 7.55e-118 340
Msa1358670 AT5G66060.2 61.111 234 79 3 1 222 2 235 1.83e-99 291
Msa1358670 AT1G20270.2 60.591 203 63 4 1 188 1 201 5.29e-81 243
Msa1358670 AT1G20270.3 60.591 203 63 4 1 188 1 201 5.29e-81 243
Msa1358670 AT3G28480.1 46.743 261 131 3 19 273 7 265 7.35e-79 241
Msa1358670 AT5G18900.1 50.000 224 99 3 57 272 30 248 1.01e-73 228
Msa1358670 AT3G06300.1 53.110 209 90 2 72 272 41 249 6.54e-73 226
Msa1358670 AT3G28490.1 53.810 210 85 4 72 272 35 241 6.53e-72 223
Msa1358670 AT3G28480.2 43.123 269 137 5 19 273 7 273 4.62e-67 211
Msa1358670 AT2G43080.1 53.140 207 83 3 70 268 78 278 1.24e-64 204
Msa1358670 AT4G35820.1 52.000 200 60 3 66 251 85 262 3.10e-64 202
Msa1358670 AT4G33910.1 42.105 209 106 6 70 268 79 282 8.76e-47 158
Msa1358670 AT2G23096.1 38.164 207 118 3 72 272 71 273 8.17e-41 142
Msa1358670 AT4G25600.1 33.005 203 104 5 72 268 62 238 3.42e-23 96.3
Msa1358670 AT4G25600.3 32.990 194 101 5 77 268 11 177 6.12e-21 89.0
Msa1358670 AT2G43080.2 53.261 92 35 2 70 153 78 169 6.82e-21 87.8
Msa1358670 AT4G25600.4 32.990 194 101 5 77 268 8 174 6.87e-21 89.0
Msa1358670 AT4G25600.2 32.990 194 101 5 77 268 20 186 7.28e-21 89.0

Find 71 sgRNAs with CRISPR-Local

Find 280 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAATTCTCCTTTCAATATTC+TGG 0.147205 tig0016357:-10187 Msa1358670:intergenic
TAATCTACTGTTTAGGGTTT+TGG 0.162740 tig0016357:+7473 Msa1358670:five_prime_UTR
CTTGAGGAGTACAAAGTTTA+AGG 0.187091 tig0016357:+11418 Msa1358670:CDS
CAAATGCTCACATTCTTCTT+TGG 0.212251 tig0016357:-9901 Msa1358670:intergenic
AAACTATTAATCTACTGTTT+AGG 0.223344 tig0016357:+7466 Msa1358670:five_prime_UTR
AAAGAATCATCGGTTGTATT+AGG 0.249163 tig0016357:-7664 Msa1358670:intergenic
AACTATTAATCTACTGTTTA+GGG 0.254382 tig0016357:+7467 Msa1358670:five_prime_UTR
CATTTATTTCCTACAATTAC+TGG 0.270348 tig0016357:-11373 Msa1358670:intergenic
CAATCTGGCCAAGCCTTTCT+TGG 0.284247 tig0016357:+9926 Msa1358670:CDS
CGATTAATCACAGAATTATC+TGG 0.285404 tig0016357:+7427 Msa1358670:five_prime_UTR
TGGGTGATGCTCTGCTGTTT+TGG 0.327708 tig0016357:+11042 Msa1358670:CDS
AGGTTCTTCACTATGGAGTT+GGG 0.328228 tig0016357:+10709 Msa1358670:CDS
CAGTAATTGTAGGAAATAAA+TGG 0.333015 tig0016357:+11374 Msa1358670:CDS
GATTGAGCAGGAGGATATAT+TGG 0.375242 tig0016357:+11593 Msa1358670:intron
TGTAGGGTTCGAACTAGTTC+AGG 0.378613 tig0016357:+10131 Msa1358670:intron
TAGTCCCTAACCGTGTAAAC+TGG 0.387706 tig0016357:-11096 Msa1358670:intergenic
GGACTTCAGGTTCTTCACTA+TGG 0.397926 tig0016357:+10702 Msa1358670:CDS
CAGGTTCTTCACTATGGAGT+TGG 0.417299 tig0016357:+10708 Msa1358670:CDS
ATCATCCTTCTTCTTGCGCT+CGG 0.436354 tig0016357:+7628 Msa1358670:CDS
AGAGAATGGGGAGGGACTTC+AGG 0.439161 tig0016357:+10689 Msa1358670:intron
AGTGGACTGAAATTCTTTCA+TGG 0.440521 tig0016357:+7826 Msa1358670:CDS
ATGTGAGCATTTGATCAATC+TGG 0.447007 tig0016357:+9911 Msa1358670:CDS
TTTATCTGAATGTGCTAGAA+AGG 0.451929 tig0016357:+10998 Msa1358670:CDS
AGGCGGGGAAATAAGTATCT+AGG 0.457148 tig0016357:+7376 None:intergenic
GGCGGTTGCCCAGTAATTGT+AGG 0.473809 tig0016357:+11364 Msa1358670:intron
CTAAAGTTGGCCTTAGCAGC+AGG 0.483611 tig0016357:-10954 Msa1358670:intergenic
GATGAGTTCAACACTAAGAA+TGG 0.491873 tig0016357:+10765 Msa1358670:CDS
GGCCTTAGCAGCAGGAAATA+CGG 0.495247 tig0016357:-10946 Msa1358670:intergenic
AGTGTCGTCGATAGCAAGAC+TGG 0.497602 tig0016357:+9957 Msa1358670:CDS
GTATTCCGAGCGCAAGAAGA+AGG 0.498036 tig0016357:-7633 Msa1358670:intergenic
TTTCAGTCCGGCGGAAAAGA+AGG 0.501427 tig0016357:+7800 Msa1358670:intron
CGTAGGTCTGACGTTGAAGA+AGG 0.509166 tig0016357:+10915 Msa1358670:intron
GACCGTATTTCCTGCTGCTA+AGG 0.509841 tig0016357:+10944 Msa1358670:CDS
ACTCATACCTACTGGTATGA+AGG 0.511725 tig0016357:-10219 Msa1358670:intergenic
CGTATGCTTTCCTTTCGCCA+TGG 0.513545 tig0016357:-7536 Msa1358670:intergenic
GATGCATCTAGTGTGGCATC+TGG 0.515596 tig0016357:-11074 Msa1358670:intergenic
ATTTATTTCCTACAATTACT+GGG 0.516066 tig0016357:-11372 Msa1358670:intergenic
GCAAGTACTTCTAGAGACTA+AGG 0.516340 tig0016357:+11451 Msa1358670:three_prime_UTR
TCTTAGTGTTGAACTCATCA+AGG 0.522896 tig0016357:-10761 Msa1358670:intergenic
CTGGAAAGAGTACAGAAAGC+AGG 0.529807 tig0016357:+9976 Msa1358670:CDS
TTGTGATAGACGAAAGCTCT+AGG 0.531458 tig0016357:-7852 Msa1358670:intergenic
GTGGACTGAAATTCTTTCAT+GGG 0.532971 tig0016357:+7827 Msa1358670:CDS
AATTTCTTCACCGGTGAACG+TGG 0.534743 tig0016357:-7562 Msa1358670:intergenic
ATCTGTGATTAAAGAATCAT+CGG 0.538500 tig0016357:-7674 Msa1358670:intergenic
TTATCTGAATGTGCTAGAAA+GGG 0.543737 tig0016357:+10999 Msa1358670:CDS
AACGTCGATAATTTCTTCAC+CGG 0.549802 tig0016357:-7571 Msa1358670:intergenic
GTCTCTAGAAGTACTTGCAC+AGG 0.553082 tig0016357:-11446 Msa1358670:intergenic
GGTTCTTCACTATGGAGTTG+GGG 0.555410 tig0016357:+10710 Msa1358670:CDS
CCATGGCACAGAACTAAAGT+TGG 0.560278 tig0016357:-10967 Msa1358670:intergenic
GCATACGCATCCACGTTCAC+CGG 0.560833 tig0016357:+7552 Msa1358670:CDS
CTAGATGCATCCAGTTTACA+CGG 0.571154 tig0016357:+11086 Msa1358670:CDS
TCAGGAATGTTTCTGAAGAG+AGG 0.571415 tig0016357:+10149 Msa1358670:CDS
TCAAGGAAGTAATCATAATG+AGG 0.573011 tig0016357:-10744 Msa1358670:intergenic
AATTTCAAAACCATGGCGAA+AGG 0.592392 tig0016357:+7526 Msa1358670:exon
TAAGAACTGTTGCAACTCGT+TGG 0.593280 tig0016357:-10791 Msa1358670:intergenic
AAATATGCAGAGAATGGGGA+GGG 0.595346 tig0016357:+10681 Msa1358670:intron
CCAACTTTAGTTCTGTGCCA+TGG 0.601374 tig0016357:+10967 Msa1358670:CDS
TCAACGCAATTTCAAAACCA+TGG 0.602891 tig0016357:+7519 Msa1358670:exon
TAAATATGCAGAGAATGGGG+AGG 0.604063 tig0016357:+10680 Msa1358670:intron
AACAAAGTGGATGCATCTTG+AGG 0.607113 tig0016357:+11402 Msa1358670:CDS
ATCGACGCAAAATCTATGAA+AGG 0.610874 tig0016357:+7695 Msa1358670:CDS
AATGTTTCTGAAGAGAGGAA+AGG 0.618883 tig0016357:+10154 Msa1358670:CDS
TGGAATTGGTTTCAGTCCGG+CGG 0.622476 tig0016357:+7791 Msa1358670:intron
AAATTATCCAGAATATTGAA+AGG 0.636890 tig0016357:+10180 Msa1358670:CDS
ATAAATGGTCTGCAACAAAG+TGG 0.639282 tig0016357:+11389 Msa1358670:CDS
GAGTTCAACACTAAGAATGG+AGG 0.669587 tig0016357:+10768 Msa1358670:CDS
ACTTTAGTTCTGTGCCATGG+TGG 0.671859 tig0016357:+10970 Msa1358670:CDS
CGGCGGAAAAGAAGGAACAG+TGG 0.698387 tig0016357:+7808 Msa1358670:CDS
AGGTCTGACGTTGAAGAAGG+CGG 0.698975 tig0016357:+10918 Msa1358670:intron
TAAACTGGATGCATCTAGTG+TGG 0.703325 tig0016357:-11081 None:intergenic
TCAGATAAATCATTCCACCA+TGG 0.719207 tig0016357:-10984 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATACTAATAAAATTGA+AGG + tig0016357:9064-9083 Msa1358670:intron 10.0%
!! ATATTCTAAATTCACAATTT+AGG - tig0016357:8110-8129 Msa1358670:intergenic 15.0%
!! AAAAAATGATCTACAATTAT+TGG - tig0016357:10036-10055 Msa1358670:intergenic 15.0%
!! AAACTATTAATCTACTGTTT+AGG + tig0016357:7466-7485 Msa1358670:five_prime_UTR 20.0%
!! AACTATTAATCTACTGTTTA+GGG + tig0016357:7467-7486 Msa1358670:five_prime_UTR 20.0%
!!! TAGTTTTTGTTATCTTTTCA+TGG + tig0016357:7884-7903 Msa1358670:intron 20.0%
!! AAATGCTTATATGAATGATT+AGG + tig0016357:8140-8159 Msa1358670:intron 20.0%
!! ATTCATTAAATCAGAAAGAA+AGG + tig0016357:8681-8700 Msa1358670:intron 20.0%
!!! TGAATTTTGAGTAATGTTAA+AGG - tig0016357:8981-9000 Msa1358670:intergenic 20.0%
!!! AGTGACTTTTATTTCAAATT+AGG - tig0016357:9013-9032 Msa1358670:intergenic 20.0%
!! CAAAACATTAACAATTAACA+AGG + tig0016357:9130-9149 Msa1358670:intron 20.0%
!!! GATTGTAGAATTTGTTAATT+GGG - tig0016357:9163-9182 Msa1358670:intergenic 20.0%
!!! TGATTGTAGAATTTGTTAAT+TGG - tig0016357:9164-9183 Msa1358670:intergenic 20.0%
!! TTTGTGATAAAAGAAAATCT+AGG + tig0016357:9689-9708 Msa1358670:intron 20.0%
!! AAATTATCCAGAATATTGAA+AGG + tig0016357:10180-10199 Msa1358670:CDS 20.0%
!!! TTTATTTTTGACAAACACAT+AGG - tig0016357:10585-10604 Msa1358670:intergenic 20.0%
!! AATTTATGGAAAGAGAATAA+GGG - tig0016357:10829-10848 Msa1358670:intergenic 20.0%
!! ATTTATTTCCTACAATTACT+GGG - tig0016357:11375-11394 Msa1358670:intergenic 20.0%
!! TTATGTTTGACTAGATATAT+AGG + tig0016357:11571-11590 Msa1358670:intron 20.0%
! ATCTGTGATTAAAGAATCAT+CGG - tig0016357:7677-7696 Msa1358670:intergenic 25.0%
!!! TTTCGTCTATCACAATTTTT+TGG + tig0016357:7860-7879 Msa1358670:intron 25.0%
! TTCTTATTGGTCAAAAACAA+TGG + tig0016357:7967-7986 Msa1358670:intron 25.0%
! ATAATATCAATCAATCGCAA+TGG + tig0016357:8178-8197 Msa1358670:intron 25.0%
! TAATATCAATCAATCGCAAT+GGG + tig0016357:8179-8198 Msa1358670:intron 25.0%
! AGAAAACAGAAAACTAACTA+TGG - tig0016357:8372-8391 Msa1358670:intergenic 25.0%
! ATGACTCAAATTCAAACAAT+CGG - tig0016357:8469-8488 Msa1358670:intergenic 25.0%
!!! GCAATAATTAGTTTTCTGTT+TGG - tig0016357:8795-8814 Msa1358670:intergenic 25.0%
!!! TTTGTTACTTTAAGCTTTAG+AGG - tig0016357:9106-9125 Msa1358670:intergenic 25.0%
!! TGTAATTAAAACCGTTTTCA+GGG - tig0016357:9340-9359 Msa1358670:intergenic 25.0%
!! TTGTAATTAAAACCGTTTTC+AGG - tig0016357:9341-9360 Msa1358670:intergenic 25.0%
! ACTAAATTGTATGAAGATAG+AGG + tig0016357:9653-9672 Msa1358670:intron 25.0%
! TAAAAGAAAATCTAGGTACA+TGG + tig0016357:9696-9715 Msa1358670:intron 25.0%
! TACATGGAATATTCAGATTA+TGG + tig0016357:9712-9731 Msa1358670:intron 25.0%
! ACAAAAAAAAACTCAAGCAA+AGG - tig0016357:10006-10025 Msa1358670:intergenic 25.0%
!!! GCTTGAGTTTTTTTTTGTAT+CGG + tig0016357:10008-10027 Msa1358670:intron 25.0%
! TATATGCAGCAACAAAAAAA+AGG - tig0016357:10296-10315 Msa1358670:intergenic 25.0%
! TAAATTTACTGTTTCATGAG+AGG - tig0016357:10460-10479 Msa1358670:intergenic 25.0%
! CTCATGAAACAGTAAATTTA+AGG + tig0016357:10460-10479 Msa1358670:intron 25.0%
! AGTTTCATGAGTTTAGATTT+GGG - tig0016357:10536-10555 Msa1358670:intergenic 25.0%
!! ACTTTTAAATATGCAGAGAA+TGG + tig0016357:10675-10694 Msa1358670:intron 25.0%
!! CTTTTAAATATGCAGAGAAT+GGG + tig0016357:10676-10695 Msa1358670:intron 25.0%
!! TTTTAAATATGCAGAGAATG+GGG + tig0016357:10677-10696 Msa1358670:intron 25.0%
! CAATTTATGGAAAGAGAATA+AGG - tig0016357:10830-10849 Msa1358670:intergenic 25.0%
! CTTATTCTCTTTCCATAAAT+TGG + tig0016357:10828-10847 Msa1358670:intron 25.0%
! GGACTATTAAATACTTTAAC+TGG + tig0016357:11113-11132 Msa1358670:intron 25.0%
! GCAATAATATGTTCAACATA+AGG - tig0016357:11264-11283 Msa1358670:intergenic 25.0%
! GTTAATTTATCTTTGCTTTC+AGG + tig0016357:11343-11362 Msa1358670:intron 25.0%
! CATTTATTTCCTACAATTAC+TGG - tig0016357:11376-11395 Msa1358670:intergenic 25.0%
! CAGTAATTGTAGGAAATAAA+TGG + tig0016357:11374-11393 Msa1358670:CDS 25.0%
!!! AAATTTTGACCCCTATTTTT+AGG - tig0016357:11493-11512 Msa1358670:intergenic 25.0%
CGATTAATCACAGAATTATC+TGG + tig0016357:7427-7446 Msa1358670:five_prime_UTR 30.0%
!! TAATCTACTGTTTAGGGTTT+TGG + tig0016357:7473-7492 Msa1358670:five_prime_UTR 30.0%
! AAAGAATCATCGGTTGTATT+AGG - tig0016357:7667-7686 Msa1358670:intergenic 30.0%
!!! GTTTGATTTTGATTCTGCTT+TGG + tig0016357:7730-7749 Msa1358670:intron 30.0%
!!! TGTTTTGTTATTGTTGCTTC+TGG + tig0016357:7771-7790 Msa1358670:intron 30.0%
AATAAGAAGTGAGAAAACCA+AGG - tig0016357:7955-7974 Msa1358670:intergenic 30.0%
!! TTGGTTTTCTCACTTCTTAT+TGG + tig0016357:7954-7973 Msa1358670:intron 30.0%
! ATTCTATTGTGTTTGGGATT+TGG - tig0016357:8322-8341 Msa1358670:intergenic 30.0%
! CAATCGATTCTATTGTGTTT+GGG - tig0016357:8328-8347 Msa1358670:intergenic 30.0%
! ACAATCGATTCTATTGTGTT+TGG - tig0016357:8329-8348 Msa1358670:intergenic 30.0%
ATCGATTGTAACTACTAACT+AGG + tig0016357:8340-8359 Msa1358670:intron 30.0%
TCGATTGTAACTACTAACTA+GGG + tig0016357:8341-8360 Msa1358670:intron 30.0%
! TTTCTGTTTTCTCTTAGCAT+TGG + tig0016357:8380-8399 Msa1358670:intron 30.0%
TGACTCAAATTCAAACAATC+GGG - tig0016357:8468-8487 Msa1358670:intergenic 30.0%
!!! TAAACGGTTTTGGAATGAAT+AGG + tig0016357:8649-8668 Msa1358670:intron 30.0%
AAAGGAAGATACAACTTCTA+TGG + tig0016357:8699-8718 Msa1358670:intron 30.0%
!! TGTAGAATTTGTTAATTGGG+AGG - tig0016357:9160-9179 Msa1358670:intergenic 30.0%
TACAAAAATGACCCTGAAAA+CGG + tig0016357:9356-9375 Msa1358670:intron 30.0%
ATGATATTGCATATTCGTCA+AGG + tig0016357:9575-9594 Msa1358670:intron 30.0%
!! TATTTCTTTGAAGTCTTGTG+TGG + tig0016357:9816-9835 Msa1358670:intron 30.0%
TCAAGAAAAGGTTTATGGAA+AGG - tig0016357:10063-10082 Msa1358670:intergenic 30.0%
CAATTCTCCTTTCAATATTC+TGG - tig0016357:10190-10209 Msa1358670:intergenic 30.0%
AAGAACTTAGTCAGAAACAT+TGG + tig0016357:10379-10398 Msa1358670:intron 30.0%
CAGTTTCATGAGTTTAGATT+TGG - tig0016357:10537-10556 Msa1358670:intergenic 30.0%
!!! ACATAGGTTTTAGAACTACT+TGG - tig0016357:10569-10588 Msa1358670:intergenic 30.0%
TCAAGGAAGTAATCATAATG+AGG - tig0016357:10747-10766 Msa1358670:intergenic 30.0%
TCTCTTTCCATAAATTGGTT+TGG + tig0016357:10833-10852 Msa1358670:intron 30.0%
TTTATCTGAATGTGCTAGAA+AGG + tig0016357:10998-11017 Msa1358670:CDS 30.0%
TTATCTGAATGTGCTAGAAA+GGG + tig0016357:10999-11018 Msa1358670:CDS 30.0%
TCTATCACTGAAACCAAAAA+TGG + tig0016357:11022-11041 Msa1358670:CDS 30.0%
CTATCACTGAAACCAAAAAT+GGG + tig0016357:11023-11042 Msa1358670:CDS 30.0%
ATTCAAGGAGGTCAAAAAAT+AGG - tig0016357:11198-11217 Msa1358670:intergenic 30.0%
CAAACATATCTCATGATTCA+AGG - tig0016357:11213-11232 Msa1358670:intergenic 30.0%
! TGTTTGACGTTTGTACATTT+TGG + tig0016357:11227-11246 Msa1358670:intron 30.0%
AATGTAATGAGTTAGTGACA+TGG - tig0016357:11286-11305 Msa1358670:intergenic 30.0%
TCATTACATTCCAATTCCAT+TGG + tig0016357:11296-11315 Msa1358670:intron 30.0%
CTTCTAATTTCCAATGGAAT+TGG - tig0016357:11309-11328 Msa1358670:intergenic 30.0%
TCAAAGCTTCTAATTTCCAA+TGG - tig0016357:11315-11334 Msa1358670:intergenic 30.0%
AATTTATCTTTGCTTTCAGG+CGG + tig0016357:11346-11365 Msa1358670:intron 30.0%
TCGATTGTTCTCCTAAAAAT+AGG + tig0016357:11479-11498 Msa1358670:three_prime_UTR 30.0%
CGATTGTTCTCCTAAAAATA+GGG + tig0016357:11480-11499 Msa1358670:three_prime_UTR 30.0%
GATTGTTCTCCTAAAAATAG+GGG + tig0016357:11481-11500 Msa1358670:three_prime_UTR 30.0%
! TAACTGAGAACTGAGATTTT+AGG - tig0016357:11554-11573 Msa1358670:intergenic 30.0%
TCAACGCAATTTCAAAACCA+TGG + tig0016357:7519-7538 Msa1358670:exon 35.0%
AATTTCAAAACCATGGCGAA+AGG + tig0016357:7526-7545 Msa1358670:exon 35.0%
AACGTCGATAATTTCTTCAC+CGG - tig0016357:7574-7593 Msa1358670:intergenic 35.0%
ATCGACGCAAAATCTATGAA+AGG + tig0016357:7695-7714 Msa1358670:CDS 35.0%
!! GTTATTGTTGCTTCTGGAAT+TGG + tig0016357:7777-7796 Msa1358670:intron 35.0%
!! AGTGGACTGAAATTCTTTCA+TGG + tig0016357:7826-7845 Msa1358670:CDS 35.0%
! GTGGACTGAAATTCTTTCAT+GGG + tig0016357:7827-7846 Msa1358670:CDS 35.0%
!! CATCAATTTGTTGACAACCT+TGG + tig0016357:7935-7954 Msa1358670:intron 35.0%
TGTCCAAAGTTGTCAAAAAG+TGG + tig0016357:8041-8060 Msa1358670:intron 35.0%
!!! CAACCACTTTTTGACAACTT+TGG - tig0016357:8047-8066 Msa1358670:intergenic 35.0%
AGCATAAAGTGGGAAAATGA+GGG - tig0016357:8281-8300 Msa1358670:intergenic 35.0%
ACTCAAATTCAAACAATCGG+GGG - tig0016357:8466-8485 Msa1358670:intergenic 35.0%
GACTCAAATTCAAACAATCG+GGG - tig0016357:8467-8486 Msa1358670:intergenic 35.0%
GTTGTTCAAATTTCTCACCA+TGG + tig0016357:8493-8512 Msa1358670:intron 35.0%
AAGATGAAAGCAAGATTCTC+AGG + tig0016357:8543-8562 Msa1358670:intron 35.0%
AGATGAAAGCAAGATTCTCA+GGG + tig0016357:8544-8563 Msa1358670:intron 35.0%
! GTGTGAGAAATTTTCTCTGA+AGG - tig0016357:8622-8641 Msa1358670:intergenic 35.0%
AGTTTGAGAGTTAGATTAGC+TGG - tig0016357:8740-8759 Msa1358670:intergenic 35.0%
! GTTTGGTTGTTACTTCAGTA+AGG - tig0016357:8778-8797 Msa1358670:intergenic 35.0%
TACAATCAAGAGATGAAGAG+AGG + tig0016357:9210-9229 Msa1358670:intron 35.0%
! GTCACTTAAAACCGTTTTCA+GGG - tig0016357:9318-9337 Msa1358670:intergenic 35.0%
!! GTTTTAAGTGACCCTGAAAA+CGG + tig0016357:9326-9345 Msa1358670:intron 35.0%
! TTCCCTTAAAACCGTTTTCA+GGG - tig0016357:9370-9389 Msa1358670:intergenic 35.0%
! TTTCCCTTAAAACCGTTTTC+AGG - tig0016357:9371-9390 Msa1358670:intergenic 35.0%
CTTGTAAAGTCTGTAAGCAT+AGG + tig0016357:9615-9634 Msa1358670:intron 35.0%
ATGAAGATAGAGGTTGTTCT+AGG + tig0016357:9663-9682 Msa1358670:intron 35.0%
TTTGGACTGTTCACAATGAT+AGG - tig0016357:9886-9905 Msa1358670:intergenic 35.0%
CAAATGCTCACATTCTTCTT+TGG - tig0016357:9904-9923 Msa1358670:intergenic 35.0%
ATGTGAGCATTTGATCAATC+TGG + tig0016357:9911-9930 Msa1358670:CDS 35.0%
! ACACTTGATTTTGCCAAGAA+AGG - tig0016357:9942-9961 Msa1358670:intergenic 35.0%
GTCTCTCAAGAAAAGGTTTA+TGG - tig0016357:10068-10087 Msa1358670:intergenic 35.0%
! AATGTTTCTGAAGAGAGGAA+AGG + tig0016357:10154-10173 Msa1358670:CDS 35.0%
! GATTTTACCTTCATACCAGT+AGG + tig0016357:10212-10231 Msa1358670:CDS 35.0%
AAAAAAGGCTACGAGACAAA+GGG - tig0016357:10281-10300 Msa1358670:intergenic 35.0%
AAAAAAAGGCTACGAGACAA+AGG - tig0016357:10282-10301 Msa1358670:intergenic 35.0%
TTTCTGACTAAGTTCTTGAG+AGG - tig0016357:10376-10395 Msa1358670:intergenic 35.0%
! TATCTCAATGTGTCGGTAAT+TGG + tig0016357:10433-10452 Msa1358670:intron 35.0%
! TCTTAGTGTTGAACTCATCA+AGG - tig0016357:10764-10783 Msa1358670:intergenic 35.0%
GATGAGTTCAACACTAAGAA+TGG + tig0016357:10765-10784 Msa1358670:CDS 35.0%
TCAGATAAATCATTCCACCA+TGG - tig0016357:10987-11006 Msa1358670:intergenic 35.0%
ACATATCTCATGATTCAAGG+AGG - tig0016357:11210-11229 Msa1358670:intergenic 35.0%
!!! TTGTACATTTTGGTACTGAC+TGG + tig0016357:11237-11256 Msa1358670:intron 35.0%
ATAAATGGTCTGCAACAAAG+TGG + tig0016357:11389-11408 Msa1358670:CDS 35.0%
! CTTGAGGAGTACAAAGTTTA+AGG + tig0016357:11418-11437 Msa1358670:CDS 35.0%
CTAGATATATAGGATTGAGC+AGG + tig0016357:11581-11600 Msa1358670:intron 35.0%
!! TTCTGGAATTGGTTTCAGTC+CGG + tig0016357:7788-7807 Msa1358670:intron 40.0%
TTGTGATAGACGAAAGCTCT+AGG - tig0016357:7855-7874 Msa1358670:intergenic 40.0%
! AATCGCAATGGGTTCACTAA+TGG + tig0016357:8190-8209 Msa1358670:intron 40.0%
GAGCATAAAGTGGGAAAATG+AGG - tig0016357:8282-8301 Msa1358670:intergenic 40.0%
AGGTGAGTAGAGCATAAAGT+GGG - tig0016357:8291-8310 Msa1358670:intergenic 40.0%
AAGGTGAGTAGAGCATAAAG+TGG - tig0016357:8292-8311 Msa1358670:intergenic 40.0%
!! GAAGAACTGGTTTGAGTTTG+TGG - tig0016357:8417-8436 Msa1358670:intergenic 40.0%
ATGGATGAGGAATGAAGAAC+TGG - tig0016357:8430-8449 Msa1358670:intergenic 40.0%
GAAACTATCATGGATGGATG+AGG - tig0016357:8443-8462 Msa1358670:intergenic 40.0%
CTCAAATTCAAACAATCGGG+GGG - tig0016357:8465-8484 Msa1358670:intergenic 40.0%
TTTACTTTGATCGAGCTCCA+TGG - tig0016357:8513-8532 Msa1358670:intergenic 40.0%
!! TTTCTCTGAAGGTATCAGAG+CGG - tig0016357:8611-8630 Msa1358670:intergenic 40.0%
CAGAGAAAATTTCTCACACC+TGG + tig0016357:8623-8642 Msa1358670:intron 40.0%
! GGTTGTTACTTCAGTAAGGT+TGG - tig0016357:8774-8793 Msa1358670:intergenic 40.0%
!! GCTTTAGAGGCTTAAAGTGT+TGG - tig0016357:9093-9112 Msa1358670:intergenic 40.0%
TGAAGAGAGGAGAACAAAGA+TGG + tig0016357:9223-9242 Msa1358670:intron 40.0%
GAAGAGAGGAGAACAAAGAT+GGG + tig0016357:9224-9243 Msa1358670:intron 40.0%
AGAGATGATGAGATGAGAAG+AGG + tig0016357:9291-9310 Msa1358670:intron 40.0%
! GGTCACTTAAAACCGTTTTC+AGG - tig0016357:9319-9338 Msa1358670:intergenic 40.0%
! TGACCCTGAAAACGGTTTTA+AGG + tig0016357:9334-9353 Msa1358670:intron 40.0%
!! GACCCTGAAAACGGTTTTAA+GGG + tig0016357:9313-9332 Msa1358670:intron 40.0%
! AGTAGCTCTGTTGTCAATAG+AGG - tig0016357:9505-9524 Msa1358670:intergenic 40.0%
AAAGTCTGTAAGCATAGGCT+AGG + tig0016357:9620-9639 Msa1358670:intron 40.0%
! AAGATAGAGGTTGTTCTAGG+TGG + tig0016357:9666-9685 Msa1358670:intron 40.0%
TAAGACTCCAGAGTTTGAGT+AGG + tig0016357:9752-9771 Msa1358670:intron 40.0%
AAGATCTCCTACTCAAACTC+TGG - tig0016357:9762-9781 Msa1358670:intergenic 40.0%
CTTGTGTGGTAGTAAACTGT+TGG + tig0016357:9830-9849 Msa1358670:intron 40.0%
! TGATTTTGCCAAGAAAGGCT+TGG - tig0016357:9937-9956 Msa1358670:intergenic 40.0%
! GACACTAGTCTCTCAAGAAA+AGG - tig0016357:10075-10094 Msa1358670:intergenic 40.0%
TAGATATATCCCCTTCCTGT+AGG + tig0016357:10114-10133 Msa1358670:intron 40.0%
AGATATATCCCCTTCCTGTA+GGG + tig0016357:10115-10134 Msa1358670:intron 40.0%
! TCAGGAATGTTTCTGAAGAG+AGG + tig0016357:10149-10168 Msa1358670:CDS 40.0%
ACTCATACCTACTGGTATGA+AGG - tig0016357:10222-10241 Msa1358670:intergenic 40.0%
GCACAAAAACTCATACCTAC+TGG - tig0016357:10230-10249 Msa1358670:intergenic 40.0%
GACAGTCTATCTCAATGTGT+CGG + tig0016357:10426-10445 Msa1358670:intron 40.0%
TCTGTATCCAGCTACATGAT+TGG + tig0016357:10621-10640 Msa1358670:intron 40.0%
CAAACAACCAATCATGTAGC+TGG - tig0016357:10631-10650 Msa1358670:intergenic 40.0%
TAAATATGCAGAGAATGGGG+AGG + tig0016357:10680-10699 Msa1358670:intron 40.0%
AAATATGCAGAGAATGGGGA+GGG + tig0016357:10681-10700 Msa1358670:intron 40.0%
AGGTTCTTCACTATGGAGTT+GGG + tig0016357:10709-10728 Msa1358670:CDS 40.0%
GAGTTCAACACTAAGAATGG+AGG + tig0016357:10768-10787 Msa1358670:CDS 40.0%
TAAGAACTGTTGCAACTCGT+TGG - tig0016357:10794-10813 Msa1358670:intergenic 40.0%
CACACTGCCAAACCAATTTA+TGG - tig0016357:10843-10862 Msa1358670:intergenic 40.0%
CTACGTAAGGAGCAAAAAGA+GGG - tig0016357:10900-10919 Msa1358670:intergenic 40.0%
TAAACTGGATGCATCTAGTG+TGG - tig0016357:11084-11103 Msa1358670:intergenic 40.0%
CTAGATGCATCCAGTTTACA+CGG + tig0016357:11086-11105 Msa1358670:CDS 40.0%
AACAAAGTGGATGCATCTTG+AGG + tig0016357:11402-11421 Msa1358670:CDS 40.0%
! GCAAGTACTTCTAGAGACTA+AGG + tig0016357:11451-11470 Msa1358670:three_prime_UTR 40.0%
GATATATAGGATTGAGCAGG+AGG + tig0016357:11584-11603 Msa1358670:intron 40.0%
GATTGAGCAGGAGGATATAT+TGG + tig0016357:11593-11612 Msa1358670:intron 40.0%
AATTTCTTCACCGGTGAACG+TGG - tig0016357:7565-7584 Msa1358670:intergenic 45.0%
ATCATCCTTCTTCTTGCGCT+CGG + tig0016357:7628-7647 Msa1358670:CDS 45.0%
TTATGCTCTACTCACCTTCG+AGG + tig0016357:8294-8313 Msa1358670:intron 45.0%
! TTTGGGATTTGGATCCTCGA+AGG - tig0016357:8311-8330 Msa1358670:intergenic 45.0%
TGTGCTTCAGCAACACTGTT+AGG - tig0016357:8577-8596 Msa1358670:intergenic 45.0%
!! TTCTCTGAAGGTATCAGAGC+GGG - tig0016357:8610-8629 Msa1358670:intergenic 45.0%
! TTCTCACACCTGGTGCTAAA+CGG + tig0016357:8633-8652 Msa1358670:intron 45.0%
TTCCAAAACCGTTTAGCACC+AGG - tig0016357:8644-8663 Msa1358670:intergenic 45.0%
GTTACTTCAGTAAGGTTGGC+TGG - tig0016357:8770-8789 Msa1358670:intergenic 45.0%
TCACACCTCTGTTGTCAAAG+CGG + tig0016357:8818-8837 Msa1358670:intron 45.0%
CATTTCCGCTTTGACAACAG+AGG - tig0016357:8826-8845 Msa1358670:intergenic 45.0%
CTGTTGTCAAAGCGGAAATG+CGG + tig0016357:8826-8845 Msa1358670:intron 45.0%
TCTGCAGATGAGATGAGAAG+AGG + tig0016357:9248-9267 Msa1358670:intron 45.0%
TGAGATGAGAAGAGGAGAGA+TGG + tig0016357:9256-9275 Msa1358670:intron 45.0%
GAGATGAGAAGAGGAGAGAT+GGG + tig0016357:9257-9276 Msa1358670:intron 45.0%
TGAGAAGAGGACCCTGAAAA+CGG + tig0016357:9304-9323 Msa1358670:intron 45.0%
!!! GCGTCGCGTTTTACTGATTT+TGG + tig0016357:9459-9478 Msa1358670:intron 45.0%
TTGTCAATAGAGGCCACTAC+TGG - tig0016357:9495-9514 Msa1358670:intergenic 45.0%
! CTGGAAAGAGTACAGAAAGC+AGG + tig0016357:9976-9995 Msa1358670:CDS 45.0%
CTTGAGAGACTAGTGTCTAG+TGG + tig0016357:10078-10097 Msa1358670:intron 45.0%
TAGTTCGAACCCTACAGGAA+GGG - tig0016357:10127-10146 Msa1358670:intergenic 45.0%
TGAACTAGTTCGAACCCTAC+AGG - tig0016357:10132-10151 Msa1358670:intergenic 45.0%
TGTAGGGTTCGAACTAGTTC+AGG + tig0016357:10131-10150 Msa1358670:intron 45.0%
GTAGCTGGATACAGAGTGAT+TGG - tig0016357:10616-10635 Msa1358670:intergenic 45.0%
! GGACTTCAGGTTCTTCACTA+TGG + tig0016357:10702-10721 Msa1358670:CDS 45.0%
CAGGTTCTTCACTATGGAGT+TGG + tig0016357:10708-10727 Msa1358670:CDS 45.0%
GGTTCTTCACTATGGAGTTG+GGG + tig0016357:10710-10729 Msa1358670:CDS 45.0%
TTTGGCAGTGTGCTTTGTGA+TGG + tig0016357:10851-10870 Msa1358670:intron 45.0%
AAAAGAGGGAGCTGTCAAGT+TGG - tig0016357:10886-10905 Msa1358670:intergenic 45.0%
CCTACGTAAGGAGCAAAAAG+AGG - tig0016357:10901-10920 Msa1358670:intergenic 45.0%
! CCTCTTTTTGCTCCTTACGT+AGG + tig0016357:10898-10917 Msa1358670:intron 45.0%
TTCAACGTCAGACCTACGTA+AGG - tig0016357:10913-10932 Msa1358670:intergenic 45.0%
CCATGGCACAGAACTAAAGT+TGG - tig0016357:10970-10989 Msa1358670:intergenic 45.0%
!! CCAACTTTAGTTCTGTGCCA+TGG + tig0016357:10967-10986 Msa1358670:CDS 45.0%
!! ACTTTAGTTCTGTGCCATGG+TGG + tig0016357:10970-10989 Msa1358670:CDS 45.0%
!! AGCAGAGCATCACCCATTTT+TGG - tig0016357:11038-11057 Msa1358670:intergenic 45.0%
TGCATCCAGTTTACACGGTT+AGG + tig0016357:11091-11110 Msa1358670:intron 45.0%
GCATCCAGTTTACACGGTTA+GGG + tig0016357:11092-11111 Msa1358670:intron 45.0%
TAGTCCCTAACCGTGTAAAC+TGG - tig0016357:11099-11118 Msa1358670:intergenic 45.0%
!! GTCTCTAGAAGTACTTGCAC+AGG - tig0016357:11449-11468 Msa1358670:intergenic 45.0%
CGTATGCTTTCCTTTCGCCA+TGG - tig0016357:7539-7558 Msa1358670:intergenic 50.0%
GTATTCCGAGCGCAAGAAGA+AGG - tig0016357:7636-7655 Msa1358670:intergenic 50.0%
! TGGAATTGGTTTCAGTCCGG+CGG + tig0016357:7791-7810 Msa1358670:intron 50.0%
TTTCAGTCCGGCGGAAAAGA+AGG + tig0016357:7800-7819 Msa1358670:intron 50.0%
! CACTGTTCCTTCTTTTCCGC+CGG - tig0016357:7810-7829 Msa1358670:intergenic 50.0%
CAATCGGGGGGAAACTATCA+TGG - tig0016357:8453-8472 Msa1358670:intergenic 50.0%
! CAGTGTTGCTGAAGCACAAC+AGG + tig0016357:8579-8598 Msa1358670:intron 50.0%
!! CACCTGGTGCTAAACGGTTT+TGG + tig0016357:8639-8658 Msa1358670:intron 50.0%
TTTGGAGAAAGCGGCTGAAG+CGG - tig0016357:9420-9439 Msa1358670:intergenic 50.0%
TTTCTCCAAATGCTCCGCCT+TGG + tig0016357:9430-9449 Msa1358670:intron 50.0%
GTAAGCATAGGCTAGGCTCA+TGG + tig0016357:9627-9646 Msa1358670:intron 50.0%
CAATCTGGCCAAGCCTTTCT+TGG + tig0016357:9926-9945 Msa1358670:CDS 50.0%
AGTGTCGTCGATAGCAAGAC+TGG + tig0016357:9957-9976 Msa1358670:CDS 50.0%
AGTTCGAACCCTACAGGAAG+GGG - tig0016357:10126-10145 Msa1358670:intergenic 50.0%
CTAGTTCGAACCCTACAGGA+AGG - tig0016357:10128-10147 Msa1358670:intergenic 50.0%
ACAAAGGGAAAGAGGCAAGC+AGG - tig0016357:10266-10285 Msa1358670:intergenic 50.0%
GCTACGAGACAAAGGGAAAG+AGG - tig0016357:10274-10293 Msa1358670:intergenic 50.0%
CGTAGGTCTGACGTTGAAGA+AGG + tig0016357:10915-10934 Msa1358670:intron 50.0%
AGGTCTGACGTTGAAGAAGG+CGG + tig0016357:10918-10937 Msa1358670:intron 50.0%
GACCGTATTTCCTGCTGCTA+AGG + tig0016357:10944-10963 Msa1358670:CDS 50.0%
GGCCTTAGCAGCAGGAAATA+CGG - tig0016357:10949-10968 Msa1358670:intergenic 50.0%
!! CTAAAGTTGGCCTTAGCAGC+AGG - tig0016357:10957-10976 Msa1358670:intergenic 50.0%
!! TGGGTGATGCTCTGCTGTTT+TGG + tig0016357:11042-11061 Msa1358670:CDS 50.0%
!!! CTCTGCTGTTTTGGAGCATG+AGG + tig0016357:11051-11070 Msa1358670:CDS 50.0%
GATGCATCTAGTGTGGCATC+TGG - tig0016357:11077-11096 Msa1358670:intergenic 50.0%
GCATACGCATCCACGTTCAC+CGG + tig0016357:7552-7571 Msa1358670:CDS 55.0%
CGGCGGAAAAGAAGGAACAG+TGG + tig0016357:7808-7827 Msa1358670:CDS 55.0%
CGGGGGGAAACTATCATGGA+TGG - tig0016357:8449-8468 Msa1358670:intergenic 55.0%
GTCAAAGCGGAAATGCGGTG+TGG + tig0016357:8831-8850 Msa1358670:intron 55.0%
GGCCACCCCAAAAATTGACG+TGG + tig0016357:8857-8876 Msa1358670:intron 55.0%
!! CGCCACGTCAATTTTTGGGG+TGG - tig0016357:8862-8881 Msa1358670:intergenic 55.0%
! CCGCGCCACGTCAATTTTTG+GGG - tig0016357:8865-8884 Msa1358670:intergenic 55.0%
CCCCAAAAATTGACGTGGCG+CGG + tig0016357:8862-8881 Msa1358670:intron 55.0%
! CCCGCGCCACGTCAATTTTT+GGG - tig0016357:8866-8885 Msa1358670:intergenic 55.0%
CCCAAAAATTGACGTGGCGC+GGG + tig0016357:8863-8882 Msa1358670:intron 55.0%
! TCCCGCGCCACGTCAATTTT+TGG - tig0016357:8867-8886 Msa1358670:intergenic 55.0%
ACGCGTAGCAGGCGCTATTT+CGG + tig0016357:8892-8911 Msa1358670:intron 55.0%
TTGGAGAAAGCGGCTGAAGC+GGG - tig0016357:9419-9438 Msa1358670:intergenic 55.0%
! GGCGGAGCATTTGGAGAAAG+CGG - tig0016357:9429-9448 Msa1358670:intergenic 55.0%
AGAGAATGGGGAGGGACTTC+AGG + tig0016357:10689-10708 Msa1358670:intron 55.0%
GGCGGTTGCCCAGTAATTGT+AGG + tig0016357:11364-11383 Msa1358670:intron 55.0%
AGCGGAAATGCGGTGTGGCA+CGG + tig0016357:8836-8855 Msa1358670:intron 60.0%
AATTGACGTGGCGCGGGATG+CGG + tig0016357:8869-8888 Msa1358670:intron 60.0%
! CGTAGCAGGCGCTATTTCGG+TGG + tig0016357:8895-8914 Msa1358670:intron 60.0%
GGGCGCGATGCAGGTAAAAG+CGG - tig0016357:9399-9418 Msa1358670:intergenic 60.0%
! GCGCTCCAAGGCGGAGCATT+TGG - tig0016357:9438-9457 Msa1358670:intergenic 65.0%
AAACGCGACGCAGCGCTCCA+AGG - tig0016357:9450-9469 Msa1358670:intergenic 65.0%
AGGCCACTACTGGCGCAGAG+CGG - tig0016357:9485-9504 Msa1358670:intergenic 65.0%
TGGCCGCTCTGCGCCAGTAG+TGG + tig0016357:9479-9498 Msa1358670:intron 70.0%
GCGGGATGCGGACGCGTAGC+AGG + tig0016357:8881-8900 Msa1358670:intron 75.0%
GGCTGAAGCGGGCGCGATGC+AGG - tig0016357:9408-9427 Msa1358670:intergenic 75.0%
CGCGACGCAGCGCTCCAAGG+CGG - tig0016357:9447-9466 Msa1358670:intergenic 75.0%
Chromosome Type Strat End Strand Name
tig0016357 gene 7379 11658 7379 ID=Msa1358670;Name=Msa1358670
tig0016357 mRNA 7379 11658 7379 ID=Msa1358670-mRNA-1;Parent=Msa1358670;Name=Msa1358670-mRNA-1;_AED=0.19;_eAED=0.19;_QI=159|0.85|0.87|1|0.85|0.75|8|185|274
tig0016357 exon 7379 7716 7379 ID=Msa1358670-mRNA-1:exon:10951;Parent=Msa1358670-mRNA-1
tig0016357 exon 7806 7863 7806 ID=Msa1358670-mRNA-1:exon:10952;Parent=Msa1358670-mRNA-1
tig0016357 exon 9900 9997 9900 ID=Msa1358670-mRNA-1:exon:10953;Parent=Msa1358670-mRNA-1
tig0016357 exon 10136 10233 10136 ID=Msa1358670-mRNA-1:exon:10954;Parent=Msa1358670-mRNA-1
tig0016357 exon 10691 10820 10691 ID=Msa1358670-mRNA-1:exon:10955;Parent=Msa1358670-mRNA-1
tig0016357 exon 10920 11107 10920 ID=Msa1358670-mRNA-1:exon:10956;Parent=Msa1358670-mRNA-1
tig0016357 exon 11365 11570 11365 ID=Msa1358670-mRNA-1:exon:10957;Parent=Msa1358670-mRNA-1
tig0016357 exon 11606 11658 11606 ID=Msa1358670-mRNA-1:exon:10958;Parent=Msa1358670-mRNA-1
tig0016357 five_prime_UTR 7379 7537 7379 ID=Msa1358670-mRNA-1:five_prime_utr;Parent=Msa1358670-mRNA-1
tig0016357 CDS 7538 7716 7538 ID=Msa1358670-mRNA-1:cds;Parent=Msa1358670-mRNA-1
tig0016357 CDS 7806 7863 7806 ID=Msa1358670-mRNA-1:cds;Parent=Msa1358670-mRNA-1
tig0016357 CDS 9900 9997 9900 ID=Msa1358670-mRNA-1:cds;Parent=Msa1358670-mRNA-1
tig0016357 CDS 10136 10233 10136 ID=Msa1358670-mRNA-1:cds;Parent=Msa1358670-mRNA-1
tig0016357 CDS 10691 10820 10691 ID=Msa1358670-mRNA-1:cds;Parent=Msa1358670-mRNA-1
tig0016357 CDS 10920 11107 10920 ID=Msa1358670-mRNA-1:cds;Parent=Msa1358670-mRNA-1
tig0016357 CDS 11365 11438 11365 ID=Msa1358670-mRNA-1:cds;Parent=Msa1358670-mRNA-1
tig0016357 three_prime_UTR 11439 11570 11439 ID=Msa1358670-mRNA-1:three_prime_utr;Parent=Msa1358670-mRNA-1
tig0016357 three_prime_UTR 11606 11658 11606 ID=Msa1358670-mRNA-1:three_prime_utr;Parent=Msa1358670-mRNA-1
Gene Sequence

>Msa1358670

ATGGCGAAAGGAAAGCATACGCATCCACGTTCACCGGTGAAGAAATTATCGACGTTGATTTTGTTGACTTTGTTCATGCTCACACTTGTCATCATCCTTCTTCTTGCGCTCGGAATACTTTATCTTCCTAATACAACCGATGATTCTTTAATCACAGATCGACGCAAAATCTATGAAAGTCCGGCGGAAAAGAAGGAACAGTGGACTGAAATTCTTTCATGGGAGCCTAGAGCTTTCTCCAAAGAAGAATGTGAGCATTTGATCAATCTGGCCAAGCCTTTCTTGGCAAAATCAAGTGTCGTCGATAGCAAGACTGGAAAGAGTACAGAAAGCAGGGTTCGAACTAGTTCAGGAATGTTTCTGAAGAGAGGAAAGGACAAAATTATCCAGAATATTGAAAGGAGAATTGCTGATTTTACCTTCATACCAGTAGAGAATGGGGAGGGACTTCAGGTTCTTCACTATGGAGTTGGGGAGAAATATGAGCCTCATTATGATTACTTCCTTGATGAGTTCAACACTAAGAATGGAGGCCAACGAGTTGCAACAGTTCTTATGTATCTGTCTGACGTTGAAGAAGGCGGTGAGACCGTATTTCCTGCTGCTAAGGCCAACTTTAGTTCTGTGCCATGGTGGAATGATTTATCTGAATGTGCTAGAAAGGGTCTATCACTGAAACCAAAAATGGGTGATGCTCTGCTGTTTTGGAGCATGAGGCCAGATGCCACACTAGATGCATCCAGTTTACACGGCGGTTGCCCAGTAATTGTAGGAAATAAATGGTCTGCAACAAAGTGGATGCATCTTGAGGAGTACAAAGTTTAA

Protein sequence

>Msa1358670

MAKGKHTHPRSPVKKLSTLILLTLFMLTLVIILLLALGILYLPNTTDDSLITDRRKIYESPAEKKEQWTEILSWEPRAFSKEECEHLINLAKPFLAKSSVVDSKTGKSTESRVRTSSGMFLKRGKDKIIQNIERRIADFTFIPVENGEGLQVLHYGVGEKYEPHYDYFLDEFNTKNGGQRVATVLMYLSDVEEGGETVFPAAKANFSSVPWWNDLSECARKGLSLKPKMGDALLFWSMRPDATLDASSLHGGCPVIVGNKWSATKWMHLEEYKV*