Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0626360 | XP_013454577.1 | 98.960 | 577 | 6 | 0 | 1 | 577 | 1 | 577 | 0.0 | 1184 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0626360 | sp|Q9C512|MNS1_ARATH | 79.167 | 552 | 103 | 5 | 1 | 551 | 1 | 541 | 0.0 | 884 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003890 | Msa0626360 | 0.843484 | 1.362085e-58 | -8.615850e-47 |
| Msa0006110 | Msa0626360 | 0.834637 | 2.671078e-56 | -8.615850e-47 |
| Msa0006390 | Msa0626360 | 0.822441 | 2.364562e-53 | -8.615850e-47 |
| Msa0026910 | Msa0626360 | 0.808341 | 3.247877e-50 | -8.615850e-47 |
| Msa0040620 | Msa0626360 | 0.802639 | 5.099423e-49 | -8.615850e-47 |
| Msa0043560 | Msa0626360 | 0.811263 | 7.639938e-51 | -8.615850e-47 |
| Msa0045790 | Msa0626360 | 0.803003 | 4.288206e-49 | -8.615850e-47 |
| Msa0046160 | Msa0626360 | 0.802600 | 5.193939e-49 | -8.615850e-47 |
| Msa0068740 | Msa0626360 | -0.838262 | 3.192421e-57 | -8.615850e-47 |
| Msa0075880 | Msa0626360 | 0.802882 | 4.542695e-49 | -8.615850e-47 |
| Msa0084380 | Msa0626360 | 0.822935 | 1.815373e-53 | -8.615850e-47 |
| Msa0604510 | Msa0626360 | 0.802274 | 6.063286e-49 | -8.615850e-47 |
| Msa0610840 | Msa0626360 | -0.800182 | 1.624850e-48 | -8.615850e-47 |
| Msa0610880 | Msa0626360 | 0.803146 | 4.007210e-49 | -8.615850e-47 |
| Msa0626090 | Msa0626360 | 0.806902 | 6.565826e-50 | -8.615850e-47 |
| Msa0626360 | Msa0626410 | 0.805147 | 1.535960e-49 | -8.615850e-47 |
| Msa0626360 | Msa0629450 | 0.800660 | 1.298525e-48 | -8.615850e-47 |
| Msa0626360 | Msa0632410 | 0.806585 | 7.660060e-50 | -8.615850e-47 |
| Msa0626360 | Msa0667050 | 0.810977 | 8.811874e-51 | -8.615850e-47 |
| Msa0626360 | Msa0669410 | 0.827534 | 1.483658e-54 | -8.615850e-47 |
| Msa0626360 | Msa0673460 | 0.826397 | 2.775121e-54 | -8.615850e-47 |
| Msa0626360 | Msa0679290 | -0.814689 | 1.355581e-51 | -8.615850e-47 |
| Msa0626360 | Msa0693380 | 0.803537 | 3.325045e-49 | -8.615850e-47 |
| Msa0626360 | Msa0697030 | 0.807261 | 5.510981e-50 | -8.615850e-47 |
| Msa0626360 | Msa0697040 | 0.808144 | 3.578044e-50 | -8.615850e-47 |
| Msa0626360 | Msa0723990 | 0.824239 | 8.991343e-54 | -8.615850e-47 |
| Msa0626360 | Msa0731940 | 0.800746 | 1.247430e-48 | -8.615850e-47 |
| Msa0626360 | Msa0732840 | 0.802810 | 4.702431e-49 | -8.615850e-47 |
| Msa0626360 | Msa0744170 | -0.824831 | 6.523314e-54 | -8.615850e-47 |
| Msa0626360 | Msa0745260 | -0.805986 | 1.024204e-49 | -8.615850e-47 |
| Msa0626360 | Msa0756460 | 0.808344 | 3.243173e-50 | -8.615850e-47 |
| Msa0626360 | Msa0764570 | 0.822129 | 2.794130e-53 | -8.615850e-47 |
| Msa0626360 | Msa0766630 | 0.800726 | 1.258872e-48 | -8.615850e-47 |
| Msa0626360 | Msa0800210 | 0.824466 | 7.950029e-54 | -8.615850e-47 |
| Msa0626360 | Msa0810220 | 0.801226 | 9.949980e-49 | -8.615850e-47 |
| Msa0626360 | Msa0820850 | 0.810312 | 1.227006e-50 | -8.615850e-47 |
| Msa0626360 | Msa0835530 | 0.809252 | 2.073782e-50 | -8.615850e-47 |
| Msa0626360 | Msa0842650 | 0.807307 | 5.387190e-50 | -8.615850e-47 |
| Msa0626360 | Msa0842710 | 0.805978 | 1.027930e-49 | -8.615850e-47 |
| Msa0626360 | Msa0849030 | 0.801650 | 8.145125e-49 | -8.615850e-47 |
| Msa0626360 | Msa0857640 | 0.828361 | 9.384888e-55 | -8.615850e-47 |
| Msa0626360 | Msa0861130 | 0.802464 | 5.541701e-49 | -8.615850e-47 |
| Msa0626360 | Msa0868700 | 0.804673 | 1.929999e-49 | -8.615850e-47 |
| Msa0626360 | Msa0876580 | 0.823014 | 1.740037e-53 | -8.615850e-47 |
| Msa0626360 | Msa0907070 | 0.807605 | 4.659212e-50 | -8.615850e-47 |
| Msa0626360 | Msa0924310 | 0.810511 | 1.111385e-50 | -8.615850e-47 |
| Msa0626360 | Msa0925290 | 0.825060 | 5.759223e-54 | -8.615850e-47 |
| Msa0626360 | Msa0936390 | 0.808883 | 2.488440e-50 | -8.615850e-47 |
| Msa0626360 | Msa0960530 | 0.809067 | 2.272837e-50 | -8.615850e-47 |
| Msa0626360 | Msa0966750 | 0.805741 | 1.153292e-49 | -8.615850e-47 |
| Msa0626360 | Msa0969520 | 0.824392 | 8.274941e-54 | -8.615850e-47 |
| Msa0626360 | Msa0974080 | 0.803411 | 3.531228e-49 | -8.615850e-47 |
| Msa0626360 | Msa0975220 | 0.804948 | 1.690946e-49 | -8.615850e-47 |
| Msa0626360 | Msa0977180 | -0.808907 | 2.459277e-50 | -8.615850e-47 |
| Msa0626360 | Msa1002000 | 0.803768 | 2.977113e-49 | -8.615850e-47 |
| Msa0626360 | Msa1002360 | 0.828006 | 1.142480e-54 | -8.615850e-47 |
| Msa0626360 | Msa1002850 | 0.810063 | 1.388258e-50 | -8.615850e-47 |
| Msa0626360 | Msa1003620 | 0.802389 | 5.742812e-49 | -8.615850e-47 |
| Msa0626360 | Msa1014540 | 0.818188 | 2.232608e-52 | -8.615850e-47 |
| Msa0626360 | Msa1026940 | 0.801802 | 7.582488e-49 | -8.615850e-47 |
| Msa0626360 | Msa1028590 | 0.814203 | 1.736573e-51 | -8.615850e-47 |
| Msa0626360 | Msa1030970 | 0.805454 | 1.324910e-49 | -8.615850e-47 |
| Msa0626360 | Msa1045200 | 0.812486 | 4.139107e-51 | -8.615850e-47 |
| Msa0626360 | Msa1075220 | -0.801963 | 7.025840e-49 | -8.615850e-47 |
| Msa0626360 | Msa1075650 | 0.806693 | 7.268943e-50 | -8.615850e-47 |
| Msa0626360 | Msa1082500 | 0.824808 | 6.605682e-54 | -8.615850e-47 |
| Msa0626360 | Msa1121490 | 0.812392 | 4.339201e-51 | -8.615850e-47 |
| Msa0626360 | Msa1123380 | 0.800288 | 1.546229e-48 | -8.615850e-47 |
| Msa0626360 | Msa1135470 | 0.808370 | 3.202004e-50 | -8.615850e-47 |
| Msa0626360 | Msa1137570 | 0.836419 | 9.460369e-57 | -8.615850e-47 |
| Msa0626360 | Msa1186950 | -0.801838 | 7.452675e-49 | -8.615850e-47 |
| Msa0626360 | Msa1192990 | 0.805544 | 1.268217e-49 | -8.615850e-47 |
| Msa0626360 | Msa1193290 | 0.818391 | 2.008887e-52 | -8.615850e-47 |
| Msa0626360 | Msa1244250 | 0.813466 | 2.523001e-51 | -8.615850e-47 |
| Msa0626360 | Msa1270730 | 0.804136 | 2.496374e-49 | -8.615850e-47 |
| Msa0626360 | Msa1277660 | 0.801065 | 1.073195e-48 | -8.615850e-47 |
| Msa0626360 | Msa1284680 | 0.820167 | 7.915233e-53 | -8.615850e-47 |
| Msa0626360 | Msa1345220 | 0.821957 | 3.063458e-53 | -8.615850e-47 |
| Msa0626360 | Msa1348890 | 0.807672 | 4.507545e-50 | -8.615850e-47 |
| Msa0626360 | Msa1353470 | 0.813858 | 2.068355e-51 | -8.615850e-47 |
| Msa0626360 | Msa1359040 | 0.800188 | 1.620375e-48 | -8.615850e-47 |
| Msa0626360 | Msa1408620 | -0.840020 | 1.117820e-57 | -8.615850e-47 |
| Msa0626360 | Msa1411020 | 0.808563 | 2.912723e-50 | -8.615850e-47 |
| Msa0626360 | Msa1412640 | 0.816278 | 6.004560e-52 | -8.615850e-47 |
| Msa0626360 | Msa1424680 | 0.802517 | 5.402628e-49 | -8.615850e-47 |
| Msa0626360 | Msa1434350 | 0.803078 | 4.139145e-49 | -8.615850e-47 |
| Msa0626360 | Msa1439320 | 0.806049 | 9.934339e-50 | -8.615850e-47 |
| Msa0626360 | Msa1466540 | 0.825191 | 5.362536e-54 | -8.615850e-47 |
| Msa0131330 | Msa0626360 | 0.803889 | 2.810149e-49 | -8.615850e-47 |
| Msa0131770 | Msa0626360 | 0.823346 | 1.455300e-53 | -8.615850e-47 |
| Msa0138500 | Msa0626360 | 0.801007 | 1.103273e-48 | -8.615850e-47 |
| Msa0173990 | Msa0626360 | 0.811120 | 8.207891e-51 | -8.615850e-47 |
| Msa0178930 | Msa0626360 | 0.803797 | 2.936563e-49 | -8.615850e-47 |
| Msa0197660 | Msa0626360 | 0.823836 | 1.117866e-53 | -8.615850e-47 |
| Msa0213040 | Msa0626360 | 0.804265 | 2.347455e-49 | -8.615850e-47 |
| Msa0220740 | Msa0626360 | 0.831577 | 1.543111e-55 | -8.615850e-47 |
| Msa0223410 | Msa0626360 | -0.805776 | 1.133960e-49 | -8.615850e-47 |
| Msa0376590 | Msa0626360 | 0.801910 | 7.203645e-49 | -8.615850e-47 |
| Msa0381610 | Msa0626360 | -0.802789 | 4.748002e-49 | -8.615850e-47 |
| Msa0390400 | Msa0626360 | -0.807601 | 4.668525e-50 | -8.615850e-47 |
| Msa0416300 | Msa0626360 | 0.810554 | 1.087984e-50 | -8.615850e-47 |
| Msa0417330 | Msa0626360 | 0.812894 | 3.368843e-51 | -8.615850e-47 |
| Msa0425790 | Msa0626360 | 0.807162 | 5.782775e-50 | -8.615850e-47 |
| Msa0433410 | Msa0626360 | -0.804998 | 1.649957e-49 | -8.615850e-47 |
| Msa0440750 | Msa0626360 | 0.809569 | 1.773267e-50 | -8.615850e-47 |
| Msa0452710 | Msa0626360 | 0.809620 | 1.729673e-50 | -8.615850e-47 |
| Msa0453350 | Msa0626360 | 0.824698 | 7.008846e-54 | -8.615850e-47 |
| Msa0455760 | Msa0626360 | 0.811066 | 8.432712e-51 | -8.615850e-47 |
| Msa0458440 | Msa0626360 | 0.811806 | 5.821536e-51 | -8.615850e-47 |
| Msa0466390 | Msa0626360 | 0.807301 | 5.404651e-50 | -8.615850e-47 |
| Msa0469940 | Msa0626360 | -0.801168 | 1.022450e-48 | -8.615850e-47 |
| Msa0239800 | Msa0626360 | 0.825669 | 4.132281e-54 | -8.615850e-47 |
| Msa0306210 | Msa0626360 | -0.839108 | 1.929386e-57 | -8.615850e-47 |
| Msa0317510 | Msa0626360 | 0.829513 | 4.936508e-55 | -8.615850e-47 |
| Msa0317730 | Msa0626360 | 0.802012 | 6.864406e-49 | -8.615850e-47 |
| Msa0319170 | Msa0626360 | 0.821653 | 3.601274e-53 | -8.615850e-47 |
| Msa0321080 | Msa0626360 | 0.802862 | 4.585904e-49 | -8.615850e-47 |
| Msa0340450 | Msa0626360 | 0.800005 | 1.765711e-48 | -8.615850e-47 |
| Msa0345970 | Msa0626360 | 0.804521 | 2.075664e-49 | -8.615850e-47 |
| Msa0484780 | Msa0626360 | 0.813013 | 3.173280e-51 | -8.615850e-47 |
| Msa0490730 | Msa0626360 | -0.803779 | 2.961629e-49 | -8.615850e-47 |
| Msa0523940 | Msa0626360 | 0.804217 | 2.402027e-49 | -8.615850e-47 |
| Msa0532350 | Msa0626360 | 0.824263 | 8.874030e-54 | -8.615850e-47 |
| Msa0536130 | Msa0626360 | 0.808801 | 2.590858e-50 | -8.615850e-47 |
| Msa0541040 | Msa0626360 | 0.800661 | 1.298145e-48 | -8.615850e-47 |
| Msa0558690 | Msa0626360 | 0.812643 | 3.823948e-51 | -8.615850e-47 |
| Msa0559500 | Msa0626360 | 0.810978 | 8.807985e-51 | -8.615850e-47 |
| Msa0564390 | Msa0626360 | 0.806240 | 9.053928e-50 | -8.615850e-47 |
| Msa0565450 | Msa0626360 | 0.804746 | 1.863360e-49 | -8.615850e-47 |
| Msa0588870 | Msa0626360 | 0.811652 | 6.288406e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0626360 | MtrunA17_Chr4g0002301 | 98.960 | 577 | 6 | 0 | 1 | 577 | 1 | 577 | 0.0 | 1184 |
| Msa0626360 | MtrunA17_Chr0c31g0494131 | 75.792 | 442 | 107 | 0 | 134 | 575 | 5 | 446 | 0.0 | 699 |
| Msa0626360 | MtrunA17_Chr4g0071731 | 63.972 | 433 | 147 | 2 | 1 | 426 | 1 | 431 | 0.0 | 564 |
| Msa0626360 | MtrunA17_Chr2g0286021 | 41.811 | 519 | 238 | 16 | 87 | 546 | 114 | 627 | 1.30e-110 | 344 |
| Msa0626360 | MtrunA17_Chr4g0071721 | 64.975 | 197 | 39 | 1 | 409 | 575 | 2 | 198 | 5.69e-82 | 255 |
| Msa0626360 | MtrunA17_Chr1g0187981 | 32.026 | 459 | 266 | 12 | 107 | 544 | 46 | 479 | 6.58e-55 | 196 |
| Msa0626360 | MtrunA17_Chr4g0059431 | 29.400 | 483 | 270 | 12 | 110 | 548 | 39 | 494 | 1.07e-48 | 178 |
| Msa0626360 | MtrunA17_Chr0c31g0494141 | 45.390 | 141 | 68 | 2 | 1 | 134 | 1 | 139 | 1.20e-31 | 120 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0626360 | AT1G51590.1 | 79.167 | 552 | 103 | 5 | 1 | 551 | 1 | 541 | 0.0 | 884 |
| Msa0626360 | AT3G21160.1 | 75.779 | 578 | 127 | 4 | 1 | 575 | 1 | 568 | 0.0 | 878 |
| Msa0626360 | AT1G51590.2 | 85.812 | 437 | 61 | 1 | 116 | 551 | 1 | 437 | 0.0 | 793 |
| Msa0626360 | AT3G21160.2 | 72.837 | 416 | 102 | 3 | 1 | 415 | 1 | 406 | 0.0 | 602 |
| Msa0626360 | AT1G30000.1 | 42.248 | 516 | 238 | 16 | 88 | 546 | 108 | 620 | 4.67e-113 | 350 |
| Msa0626360 | AT1G30000.2 | 42.248 | 516 | 238 | 16 | 88 | 546 | 128 | 640 | 9.57e-113 | 350 |
| Msa0626360 | AT5G43710.3 | 31.602 | 462 | 267 | 9 | 107 | 546 | 39 | 473 | 2.90e-55 | 196 |
| Msa0626360 | AT5G43710.2 | 32.096 | 458 | 270 | 9 | 107 | 546 | 39 | 473 | 3.95e-55 | 196 |
| Msa0626360 | AT5G43710.1 | 31.398 | 465 | 270 | 9 | 107 | 549 | 39 | 476 | 9.17e-55 | 196 |
| Msa0626360 | AT1G27520.1 | 30.064 | 469 | 277 | 9 | 107 | 548 | 36 | 480 | 8.06e-53 | 190 |
Find 162 sgRNAs with CRISPR-Local
Find 421 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAATTTCCCTTGTCTTTA+AGG | -0.031519 | 4_3:+5809509 | Msa0626360:five_prime_UTR |
| TAAAATTTGTTGAATATTCT+TGG | 0.162503 | 4_3:+5809216 | Msa0626360:five_prime_UTR |
| TATGAAATGCACTCAAAATT+TGG | 0.175445 | 4_3:-5816177 | None:intergenic |
| AATAACTGACTTGCAAAATT+TGG | 0.179095 | 4_3:+5811125 | Msa0626360:CDS |
| CTTAGTACATACGATCTTTC+AGG | 0.182763 | 4_3:+5812642 | Msa0626360:CDS |
| TTTGGAATTATGACTAAAAT+AGG | 0.185525 | 4_3:+5816125 | Msa0626360:intron |
| TCTTGATACACTATACATTA+TGG | 0.190941 | 4_3:+5811960 | Msa0626360:CDS |
| GAGAACTATTTCTTTCATTC+TGG | 0.205349 | 4_3:+5815145 | Msa0626360:CDS |
| ATGAATACTTGCTTAAAGTT+TGG | 0.236436 | 4_3:+5814044 | Msa0626360:CDS |
| CCAATCAACTCCAACAAAAT+TGG | 0.258347 | 4_3:+5815117 | Msa0626360:CDS |
| TCCTTTCTGCCACCTATTCT+AGG | 0.259317 | 4_3:-5815831 | None:intergenic |
| ACGAGGAATTTGTTCCATTA+TGG | 0.262527 | 4_3:+5815931 | Msa0626360:three_prime_UTR |
| TGCTCCAGGGATGATTGCTT+TGG | 0.263542 | 4_3:+5814584 | Msa0626360:CDS |
| TTTCAAGGGTGAGAGTATTT+TGG | 0.274453 | 4_3:+5813568 | Msa0626360:intron |
| AATTCCTCGTCTTTGAATCT+TGG | 0.293136 | 4_3:-5815918 | None:intergenic |
| CTCCAGCTGTAAAACTTTAT+AGG | 0.296089 | 4_3:+5814083 | Msa0626360:CDS |
| TCCCTTCAAGTCAAGCTTCC+TGG | 0.299552 | 4_3:-5811542 | None:intergenic |
| CCCTTGTCTTTAAGGTTGTT+TGG | 0.307762 | 4_3:+5809517 | Msa0626360:five_prime_UTR |
| AAACCTTCTGCTGGTACTTC+GGG | 0.317139 | 4_3:-5813646 | None:intergenic |
| TGAATACTTGCTTAAAGTTT+GGG | 0.318324 | 4_3:+5814045 | Msa0626360:CDS |
| GTCAATAGCTTTGGAGGTCT+TGG | 0.324765 | 4_3:+5811919 | Msa0626360:CDS |
| GCTTTGGGATCGTCTGGTTA+TGG | 0.325389 | 4_3:+5814600 | Msa0626360:CDS |
| TTCTCATTTGAGTTCTTAAC+AGG | 0.325798 | 4_3:-5815795 | None:intergenic |
| CTTATAGTATCTGTATTCTA+TGG | 0.326061 | 4_3:-5816238 | None:intergenic |
| GACAAGTTGATTATGTTATA+AGG | 0.331862 | 4_3:-5812741 | None:intergenic |
| GTCTTGGTATGTCTTGTTGC+CGG | 0.332446 | 4_3:-5815321 | None:intergenic |
| TGAGTAGTAGTAGCAGTAAA+TGG | 0.341072 | 4_3:+5809616 | Msa0626360:CDS |
| GCTCCAGGGATGATTGCTTT+GGG | 0.342865 | 4_3:+5814585 | Msa0626360:CDS |
| CTTGATACACTATACATTAT+GGG | 0.345860 | 4_3:+5811961 | Msa0626360:CDS |
| TTGGGAAGCAATTGTGAAAC+AGG | 0.354810 | 4_3:+5815981 | Msa0626360:three_prime_UTR |
| TTGAATACCCATTCATCTAA+TGG | 0.357605 | 4_3:-5815726 | None:intergenic |
| AATAAAACATTTCCTGATGA+TGG | 0.361053 | 4_3:+5813790 | Msa0626360:CDS |
| AAAACCTTCTGCTGGTACTT+CGG | 0.372457 | 4_3:-5813647 | None:intergenic |
| AGAACTATTTCTTTCATTCT+GGG | 0.375064 | 4_3:+5815146 | Msa0626360:CDS |
| CGAATTTGTTTGTCTGATGA+AGG | 0.380422 | 4_3:-5809456 | None:intergenic |
| TTCCCTTCTCTGGATATCAA+TGG | 0.381049 | 4_3:-5811602 | None:intergenic |
| CGGTCATTCCATTAGATGAA+TGG | 0.381669 | 4_3:+5815718 | Msa0626360:CDS |
| TATGGAATGCGCAGATATAT+AGG | 0.384369 | 4_3:-5816220 | None:intergenic |
| TCCCTTCTCTGGATATCAAT+GGG | 0.384629 | 4_3:-5811601 | None:intergenic |
| GACTTTAATTGCAGCTTGCT+TGG | 0.386052 | 4_3:+5815077 | Msa0626360:intron |
| CGCATAGAGTCTGGCTATGT+TGG | 0.393126 | 4_3:+5815383 | Msa0626360:CDS |
| CATTTGGCGCCATGGGTGAT+AGG | 0.398474 | 4_3:+5813869 | Msa0626360:CDS |
| AGATGTCAGAATTCCTTCAT+TGG | 0.401087 | 4_3:+5815962 | Msa0626360:three_prime_UTR |
| TCCTATCACATTTGGCGCCA+TGG | 0.401558 | 4_3:+5813861 | Msa0626360:CDS |
| CTTCAAATGATGAGTAATAT+AGG | 0.402362 | 4_3:+5816025 | Msa0626360:three_prime_UTR |
| GTAATATAGGAAATAGAAAT+AGG | 0.404305 | 4_3:+5816038 | Msa0626360:three_prime_UTR |
| ACATCTTACAAGCTCCATAA+TGG | 0.405543 | 4_3:-5815945 | None:intergenic |
| TGCCAGGAAGCTTGACTTGA+AGG | 0.415453 | 4_3:+5811540 | Msa0626360:CDS |
| CAGCTGGGTCGCAAACTCTC+TGG | 0.420510 | 4_3:+5812425 | Msa0626360:intron |
| TCACCACAATCCAGAGTAGT+AGG | 0.425238 | 4_3:+5812612 | Msa0626360:intron |
| ATGATTGCTTTGGGATCGTC+TGG | 0.428595 | 4_3:+5814594 | Msa0626360:CDS |
| ACACAGAAGCACACCCTTTG+AGG | 0.428655 | 4_3:+5815748 | Msa0626360:CDS |
| AAAAGTGGTGTCAATAGCTT+TGG | 0.429770 | 4_3:+5811910 | Msa0626360:CDS |
| GATGTCAGAATTCCTTCATT+GGG | 0.432081 | 4_3:+5815963 | Msa0626360:three_prime_UTR |
| CAAGTCCACTAAAGAAGTCT+TGG | 0.432620 | 4_3:+5811573 | Msa0626360:CDS |
| AGCAATGAATTCTAGTTGTT+CGG | 0.434522 | 4_3:-5813603 | None:intergenic |
| GGCTACTCTCCTATCACATT+TGG | 0.436591 | 4_3:+5813853 | Msa0626360:CDS |
| TCACAATTGCTTCCCAATGA+AGG | 0.437677 | 4_3:-5815975 | None:intergenic |
| ATCATCCAAGACTTCTTTAG+TGG | 0.438383 | 4_3:-5811578 | None:intergenic |
| CGAAGAAGAAGACTTGACTT+TGG | 0.442376 | 4_3:-5809299 | None:intergenic |
| GAACTAGCGTGCTTTGCTCC+AGG | 0.446640 | 4_3:+5814570 | Msa0626360:CDS |
| ACTCAACTGTCTCTGGCCTT+AGG | 0.449895 | 4_3:-5815274 | None:intergenic |
| CTTGCTTAAAGTTTGGGTAC+AGG | 0.450625 | 4_3:+5814051 | Msa0626360:CDS |
| GCAACAAGACATACCAAGAC+TGG | 0.452423 | 4_3:+5815324 | Msa0626360:CDS |
| AAAAGCATAGCAAGACGCTT+TGG | 0.461517 | 4_3:-5809672 | None:intergenic |
| AAGAGTGACTCAACTGTCTC+TGG | 0.462962 | 4_3:-5815281 | None:intergenic |
| GGTCATTCCATTAGATGAAT+GGG | 0.464425 | 4_3:+5815719 | Msa0626360:CDS |
| ATAGGAAGTAATCCATCATC+AGG | 0.465898 | 4_3:-5813802 | None:intergenic |
| GCACACAATCCTGGATGGAC+TGG | 0.466253 | 4_3:+5812774 | Msa0626360:CDS |
| AATCCTCATAGCGGAACAAC+AGG | 0.470428 | 4_3:+5813832 | Msa0626360:CDS |
| AAGGTCTGCTAAGTTTGATT+CGG | 0.470541 | 4_3:+5814378 | Msa0626360:CDS |
| AAGTGCACGGTGGCACTGCC+AGG | 0.472635 | 4_3:+5811524 | Msa0626360:CDS |
| AAGAACTCTCGCATAGAGTC+TGG | 0.473159 | 4_3:+5815374 | Msa0626360:CDS |
| GTTTATGTCACTTGCTGAAG+AGG | 0.473483 | 4_3:+5814641 | Msa0626360:CDS |
| CAGGGACGTGCACACAATCC+TGG | 0.473872 | 4_3:+5812765 | Msa0626360:CDS |
| GTCTGGCTATGTTGGACTAA+AGG | 0.473990 | 4_3:+5815391 | Msa0626360:CDS |
| GGTATGTCTTGTTGCCGGTT+AGG | 0.474868 | 4_3:-5815316 | None:intergenic |
| GGACGCTTCAAGTAATAAGC+TGG | 0.475500 | 4_3:-5809651 | None:intergenic |
| GGCAGAAAGGAAGGTCGGTC+GGG | 0.477322 | 4_3:+5815843 | Msa0626360:CDS |
| TAGCCTGTTGTTCCGCTATG+AGG | 0.478900 | 4_3:-5813835 | None:intergenic |
| CCTATCACATTTGGCGCCAT+GGG | 0.481889 | 4_3:+5813862 | Msa0626360:CDS |
| AGTGGTGTCAATAGCTTTGG+AGG | 0.491088 | 4_3:+5811913 | Msa0626360:CDS |
| CCCATGGCGCCAAATGTGAT+AGG | 0.494378 | 4_3:-5813862 | None:intergenic |
| CACACAATCCTGGATGGACT+GGG | 0.495719 | 4_3:+5812775 | Msa0626360:CDS |
| ATAAACTTCTGTGAATCATC+AGG | 0.496945 | 4_3:-5814624 | None:intergenic |
| CAGATAGATTACTGCCTGCA+TGG | 0.503951 | 4_3:+5812700 | Msa0626360:CDS |
| CCTGCATGGAACACACCTAC+AGG | 0.506080 | 4_3:+5812714 | Msa0626360:CDS |
| CTATGAGGATTAATATAGAT+AGG | 0.506140 | 4_3:-5813820 | None:intergenic |
| TTGCTTAAAGTTTGGGTACA+GGG | 0.506391 | 4_3:+5814052 | Msa0626360:CDS |
| CCTGTAGGTGTGTTCCATGC+AGG | 0.506768 | 4_3:-5812714 | None:intergenic |
| ATCTCTAAAACAGAGATATG+TGG | 0.508836 | 4_3:+5814342 | Msa0626360:intron |
| TCTAATGGAATGACCGAAGA+AGG | 0.512329 | 4_3:-5815711 | None:intergenic |
| AAAGATCGTATGTACTAAGA+AGG | 0.512574 | 4_3:-5812638 | None:intergenic |
| TCCTAGAATAGGTGGCAGAA+AGG | 0.513208 | 4_3:+5815830 | Msa0626360:CDS |
| AATGCAATATCATACTTTGT+CGG | 0.513942 | 4_3:-5814456 | None:intergenic |
| TCTTTGAATCTTGGTTGAAG+TGG | 0.515985 | 4_3:-5815909 | None:intergenic |
| CTTCTCACATATATAAGTAA+AGG | 0.516300 | 4_3:-5814417 | None:intergenic |
| TCAACTCCAACAAAATTGGC+TGG | 0.521796 | 4_3:+5815121 | Msa0626360:CDS |
| TGGCAGAAAGGAAGGTCGGT+CGG | 0.523530 | 4_3:+5815842 | Msa0626360:CDS |
| TCTCTAAAACAGAGATATGT+GGG | 0.524260 | 4_3:+5814343 | Msa0626360:intron |
| TAACATAATCAACTTGTCAC+AGG | 0.524401 | 4_3:+5812746 | Msa0626360:CDS |
| CTCACTTTCCAGGTTAACAC+TGG | 0.531665 | 4_3:+5815618 | Msa0626360:intron |
| TTCCTTGTCACAATCCTCAA+AGG | 0.532807 | 4_3:-5815762 | None:intergenic |
| ATATATTCCAACCCCAGTCT+TGG | 0.533450 | 4_3:-5815337 | None:intergenic |
| CAACGTTGTTGTAAATTCGA+AGG | 0.536984 | 4_3:+5809551 | Msa0626360:five_prime_UTR |
| AAGATGCAATGCTTCATGCT+TGG | 0.537436 | 4_3:+5811632 | Msa0626360:CDS |
| ATGCGCAGATATATAGGCCT+CGG | 0.537706 | 4_3:-5816214 | None:intergenic |
| TTCTTATGAGAAATATGCAT+GGG | 0.539737 | 4_3:+5811657 | Msa0626360:CDS |
| AGACATACCAAGACTGGGGT+TGG | 0.541682 | 4_3:+5815330 | Msa0626360:CDS |
| GAATTTGTTTGTCTGATGAA+GGG | 0.542271 | 4_3:-5809455 | None:intergenic |
| AAACTTACCCCAGTCCATCC+AGG | 0.543349 | 4_3:-5812783 | None:intergenic |
| GAACTATTTCTTTCATTCTG+GGG | 0.545923 | 4_3:+5815147 | Msa0626360:CDS |
| ATTATGACTAAAATAGGTTG+TGG | 0.546171 | 4_3:+5816131 | Msa0626360:intron |
| GACAACGAAGCCAATCCAAA+AGG | 0.546838 | 4_3:-5809378 | None:intergenic |
| TCCTTGTCACAATCCTCAAA+GGG | 0.549191 | 4_3:-5815761 | None:intergenic |
| CAACAAGACATACCAAGACT+GGG | 0.552744 | 4_3:+5815325 | Msa0626360:CDS |
| GCCAGGAAGCTTGACTTGAA+GGG | 0.557872 | 4_3:+5811541 | Msa0626360:CDS |
| AACTAGCGTGCTTTGCTCCA+GGG | 0.559285 | 4_3:+5814571 | Msa0626360:CDS |
| CTATTTCTTTCATTCTGGGG+AGG | 0.561509 | 4_3:+5815150 | Msa0626360:CDS |
| AACTTTAGTCAGAGAATACC+AGG | 0.562310 | 4_3:+5809737 | Msa0626360:CDS |
| AGAATAGGTGGCAGAAAGGA+AGG | 0.566046 | 4_3:+5815834 | Msa0626360:CDS |
| GATCCCAAAGCAATCATCCC+TGG | 0.568620 | 4_3:-5814588 | None:intergenic |
| ACATGAGTGTGGGTACATCA+TGG | 0.569922 | 4_3:+5815246 | Msa0626360:CDS |
| ATTGCTCTATCTCAAAGGAC+AGG | 0.571429 | 4_3:+5813620 | Msa0626360:CDS |
| TGTTGCCGGTTAGGCGCCAA+AGG | 0.581339 | 4_3:-5815307 | None:intergenic |
| TGCTTAAAGTTTGGGTACAG+GGG | 0.583168 | 4_3:+5814053 | Msa0626360:CDS |
| AAACAAATTCGTAGATTACA+AGG | 0.583330 | 4_3:+5809468 | Msa0626360:five_prime_UTR |
| ATGTTATAAGGAATTCCTGT+AGG | 0.583861 | 4_3:-5812729 | None:intergenic |
| ATGGGGACAAGATGAACTAC+AGG | 0.593624 | 4_3:+5811675 | Msa0626360:CDS |
| TCCCATTGATATCCAGAGAA+GGG | 0.595354 | 4_3:+5811600 | Msa0626360:CDS |
| CATATATAAGTAAAGGAAGA+CGG | 0.597688 | 4_3:-5814410 | None:intergenic |
| TCATGGTAGACAAGCATGAA+CGG | 0.602371 | 4_3:-5815874 | None:intergenic |
| ATCTTTGTAAAATGGCGAGA+GGG | 0.606061 | 4_3:+5809583 | Msa0626360:exon |
| AGTGGTTCATCAACTAGTCA+TGG | 0.606457 | 4_3:-5815891 | None:intergenic |
| AATTCATTGCTCTATCTCAA+AGG | 0.611990 | 4_3:+5813615 | Msa0626360:CDS |
| ACTTATATATGTGAGAAGAG+TGG | 0.613725 | 4_3:+5814422 | Msa0626360:CDS |
| GACGTGCACACAATCCTGGA+TGG | 0.614534 | 4_3:+5812769 | Msa0626360:CDS |
| ATCCCATTGATATCCAGAGA+AGG | 0.615122 | 4_3:+5811599 | Msa0626360:CDS |
| ACCAAACAACCTTAAAGACA+AGG | 0.617047 | 4_3:-5809518 | None:intergenic |
| GTTCTTATGAGAAATATGCA+TGG | 0.626930 | 4_3:+5811656 | Msa0626360:CDS |
| GTACATCATGGAACATCCTA+AGG | 0.630696 | 4_3:+5815258 | Msa0626360:CDS |
| ATACATGATTTATGTAACCG+AGG | 0.633864 | 4_3:+5816197 | Msa0626360:three_prime_UTR |
| AGACCCGAAGTACCAGCAGA+AGG | 0.635999 | 4_3:+5813643 | Msa0626360:CDS |
| CGAAGCCAATCCAAAAGGAG+TGG | 0.636885 | 4_3:-5809373 | None:intergenic |
| CAATATCTCTAGCTTTGTCG+AGG | 0.637059 | 4_3:-5812677 | None:intergenic |
| ACCCTTTGAGGATTGTGACA+AGG | 0.641871 | 4_3:+5815760 | Msa0626360:CDS |
| GATGCAAAGTTTCTTTCTCG+CGG | 0.643973 | 4_3:+5815656 | Msa0626360:CDS |
| GTGTTAATACCTATCACCCA+TGG | 0.646060 | 4_3:-5813878 | None:intergenic |
| AACATAATCAACTTGTCACA+GGG | 0.646456 | 4_3:+5812747 | Msa0626360:CDS |
| TAGGTGGCAGAAAGGAAGGT+CGG | 0.649075 | 4_3:+5815838 | Msa0626360:CDS |
| CCAAACAACCTTAAAGACAA+GGG | 0.653395 | 4_3:-5809517 | None:intergenic |
| GAAGAGTCAAATAAAGTGCA+CGG | 0.653458 | 4_3:+5811511 | Msa0626360:CDS |
| TATATATGTGAGAAGAGTGG+AGG | 0.655638 | 4_3:+5814425 | Msa0626360:CDS |
| GATCTTTGTAAAATGGCGAG+AGG | 0.659557 | 4_3:+5809582 | Msa0626360:exon |
| ATCTATATTAATCCTCATAG+CGG | 0.683086 | 4_3:+5813823 | Msa0626360:CDS |
| GATTGTGACAAGGAACGAAG+CGG | 0.686601 | 4_3:+5815770 | Msa0626360:CDS |
| ACACAATCCTGGATGGACTG+GGG | 0.692267 | 4_3:+5812776 | Msa0626360:CDS |
| CCACAATCCAGAGTAGTAGG+TGG | 0.698751 | 4_3:+5812615 | Msa0626360:intron |
| TCTTATGAGAAATATGCATG+GGG | 0.709749 | 4_3:+5811658 | Msa0626360:CDS |
| TCAACCAAGATTCAAAGACG+AGG | 0.715134 | 4_3:+5815914 | Msa0626360:three_prime_UTR |
| AACAAGACATACCAAGACTG+GGG | 0.729451 | 4_3:+5815326 | Msa0626360:CDS |
| GAGTCAAATAAAGTGCACGG+TGG | 0.808220 | 4_3:+5811514 | Msa0626360:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GAAATTATTTATGATTTTTT+TGG | + | chr4_3:5811019-5811038 | Msa0626360:intron | 10.0% |
| !!! | TTTTTATTATTTTTTCTTTG+GGG | + | chr4_3:5811461-5811480 | Msa0626360:intron | 10.0% |
| !!! | ATTATACTTTTTTAATTGAA+GGG | - | chr4_3:5812531-5812550 | None:intergenic | 10.0% |
| !!! | TATTATACTTTTTTAATTGA+AGG | - | chr4_3:5812532-5812551 | None:intergenic | 10.0% |
| !!! | TAAAATTTGTTGAATATTCT+TGG | + | chr4_3:5809216-5809235 | Msa0626360:five_prime_UTR | 15.0% |
| !!! | TGATTTCTAGAATAAAAAAT+TGG | - | chr4_3:5809419-5809438 | None:intergenic | 15.0% |
| !!! | TTTTATAGATCTTTGTAAAA+TGG | + | chr4_3:5809575-5809594 | Msa0626360:exon | 15.0% |
| !!! | ATAACTGTTTTTTTAAATAC+AGG | + | chr4_3:5811077-5811096 | Msa0626360:intron | 15.0% |
| !!! | TTCTTTTCATTGTTAATTAT+TGG | - | chr4_3:5811239-5811258 | None:intergenic | 15.0% |
| !! | AATAATTAACAATGAAAAGA+AGG | + | chr4_3:5811238-5811257 | Msa0626360:intron | 15.0% |
| !!! | TTTTATTATTTTTTCTTTGG+GGG | + | chr4_3:5811462-5811481 | Msa0626360:intron | 15.0% |
| !! | AAAAAAAAACAATAACAATC+AGG | - | chr4_3:5812049-5812068 | None:intergenic | 15.0% |
| !!! | GTTGTTTCTAATATTATATT+TGG | + | chr4_3:5812113-5812132 | Msa0626360:intron | 15.0% |
| !!! | GTAACTTTTATATATGAATT+AGG | - | chr4_3:5812315-5812334 | None:intergenic | 15.0% |
| !!! | TTTTTCTTTTTCTTTTTTGT+TGG | + | chr4_3:5812582-5812601 | Msa0626360:intron | 15.0% |
| !! | ACTAGTATAAAAGTTAAAAT+TGG | - | chr4_3:5813466-5813485 | None:intergenic | 15.0% |
| !!! | TTTTTGTCTTAATTTTTCAA+GGG | + | chr4_3:5813554-5813573 | Msa0626360:intron | 15.0% |
| !!! | TTTTTGTATTTCAATTATCA+TGG | + | chr4_3:5814213-5814232 | Msa0626360:intron | 15.0% |
| !!! | TTTTCAAATAAATGTAGAAT+AGG | + | chr4_3:5814258-5814277 | Msa0626360:intron | 15.0% |
| !!! | TTTTAGAGATTAAAAAGAAA+TGG | - | chr4_3:5814332-5814351 | None:intergenic | 15.0% |
| !!! | TAAAAAAGCATTTATATGAT+TGG | - | chr4_3:5814800-5814819 | None:intergenic | 15.0% |
| !! | CATTTAGAAAAGATAAAATA+AGG | + | chr4_3:5814830-5814849 | Msa0626360:intron | 15.0% |
| !! | TTCCACAAAAATAAAATTAA+GGG | - | chr4_3:5816157-5816176 | None:intergenic | 15.0% |
| !!! | TTCTAGAATAAAAAATTGGT+AGG | - | chr4_3:5809415-5809434 | None:intergenic | 20.0% |
| !! | TTCATCTTCTGATATATTAT+CGG | + | chr4_3:5809935-5809954 | Msa0626360:intron | 20.0% |
| !! | TAGTAATATCAAATCAGTAT+AGG | - | chr4_3:5810096-5810115 | None:intergenic | 20.0% |
| !!! | ATACTGATTTGATATTACTA+AGG | + | chr4_3:5810096-5810115 | Msa0626360:intron | 20.0% |
| !!! | ATTGTAGATATTTTATGAAC+CGG | + | chr4_3:5810407-5810426 | Msa0626360:intron | 20.0% |
| !!! | TAATTTTAACTTAGTAGAGA+AGG | + | chr4_3:5810469-5810488 | Msa0626360:intron | 20.0% |
| !!! | TAATATAGCTATCATACTTT+TGG | + | chr4_3:5810719-5810738 | Msa0626360:intron | 20.0% |
| !!! | AAGTGTAACTTTATTTTTAG+AGG | + | chr4_3:5810990-5811009 | Msa0626360:intron | 20.0% |
| !!! | AGTGTAACTTTATTTTTAGA+GGG | + | chr4_3:5810991-5811010 | Msa0626360:intron | 20.0% |
| !! | TTAAAAAAACAGTTATCTAC+TGG | - | chr4_3:5811073-5811092 | None:intergenic | 20.0% |
| !! | TAATTATTGGCAAAATGAAA+TGG | - | chr4_3:5811226-5811245 | None:intergenic | 20.0% |
| !! | TTTATTGCATAATGATCTAA+TGG | + | chr4_3:5811710-5811729 | Msa0626360:intron | 20.0% |
| !! | ATGATTCTAAACAAATATAG+AGG | - | chr4_3:5812084-5812103 | None:intergenic | 20.0% |
| !! | ACAATTGAACATTAGATATA+CGG | - | chr4_3:5812366-5812385 | None:intergenic | 20.0% |
| !! | GATACAAAATTTGTAAACAA+TGG | - | chr4_3:5812905-5812924 | None:intergenic | 20.0% |
| !!! | AGTACAATATTTTGTTCAAA+AGG | - | chr4_3:5813021-5813040 | None:intergenic | 20.0% |
| !! | AAGTTTCAAACACAAAAAAA+AGG | - | chr4_3:5813186-5813205 | None:intergenic | 20.0% |
| !! | AAAAGATAATCATGAAAACA+TGG | - | chr4_3:5813211-5813230 | None:intergenic | 20.0% |
| !!! | TACTGATTTCTAATTTTATC+CGG | + | chr4_3:5813311-5813330 | Msa0626360:intron | 20.0% |
| !! | CTTGAAAAATTAAGACAAAA+AGG | - | chr4_3:5813555-5813574 | None:intergenic | 20.0% |
| !!! | CTTTTTGTCTTAATTTTTCA+AGG | + | chr4_3:5813553-5813572 | Msa0626360:intron | 20.0% |
| !!! | CATATATTCAGTTTTTTACA+GGG | + | chr4_3:5813682-5813701 | Msa0626360:intron | 20.0% |
| !!! | ACTTTTATCATGTAAAAAGA+TGG | - | chr4_3:5813914-5813933 | None:intergenic | 20.0% |
| !!! | CTTTTTACATGATAAAAGTA+TGG | + | chr4_3:5813915-5813934 | Msa0626360:intron | 20.0% |
| !! | TATTTCAATTATCATGGTTA+AGG | + | chr4_3:5814219-5814238 | Msa0626360:intron | 20.0% |
| !! | TCAATGGTAAATATTAAATG+CGG | - | chr4_3:5814497-5814516 | None:intergenic | 20.0% |
| !! | AATATTTACCATTGATGTAT+TGG | + | chr4_3:5814502-5814521 | Msa0626360:intron | 20.0% |
| !!! | AAATTGTTTTCACTTATAAG+CGG | + | chr4_3:5814855-5814874 | Msa0626360:intron | 20.0% |
| !!! | AATTCAATTCTGAATTTTCA+AGG | + | chr4_3:5815223-5815242 | Msa0626360:intron | 20.0% |
| !! | CATTATTAAATGTGAAATTG+AGG | - | chr4_3:5815428-5815447 | None:intergenic | 20.0% |
| !! | GTAATATAGGAAATAGAAAT+AGG | + | chr4_3:5816038-5816057 | Msa0626360:three_prime_UTR | 20.0% |
| !!! | TTTTAGTCATAATTCCAAAA+GGG | - | chr4_3:5816124-5816143 | None:intergenic | 20.0% |
| !!! | ATTTTAGTCATAATTCCAAA+AGG | - | chr4_3:5816125-5816144 | None:intergenic | 20.0% |
| !!! | TTTGGAATTATGACTAAAAT+AGG | + | chr4_3:5816125-5816144 | Msa0626360:intron | 20.0% |
| !! | GTTCCACAAAAATAAAATTA+AGG | - | chr4_3:5816158-5816177 | None:intergenic | 20.0% |
| !!! | CTTTGATTGTTATTTTAAAG+TGG | + | chr4_3:5816295-5816314 | Msa0626360:three_prime_UTR | 20.0% |
| ! | AAAAATTGGTAGGAAATGAA+TGG | - | chr4_3:5809405-5809424 | None:intergenic | 25.0% |
| ! | AAACAAATTCGTAGATTACA+AGG | + | chr4_3:5809468-5809487 | Msa0626360:five_prime_UTR | 25.0% |
| !!! | TTTCTGTTTCTTTTGTTGTT+TGG | + | chr4_3:5809706-5809725 | Msa0626360:CDS | 25.0% |
| !!! | TTCTGTTTCTTTTGTTGTTT+GGG | + | chr4_3:5809707-5809726 | Msa0626360:CDS | 25.0% |
| ! | TGTATTTCTTCATTTGTTTG+TGG | + | chr4_3:5809762-5809781 | Msa0626360:intron | 25.0% |
| !!! | TTTTGTTTCAATTCTGTGTT+TGG | + | chr4_3:5809804-5809823 | Msa0626360:intron | 25.0% |
| ! | TTTGATATTACTAAGGAGTA+AGG | + | chr4_3:5810103-5810122 | Msa0626360:intron | 25.0% |
| ! | ATTAAAATGTTGTCGAATAG+TGG | + | chr4_3:5810291-5810310 | Msa0626360:intron | 25.0% |
| ! | CTTGTACAATAGACTAAAAA+TGG | - | chr4_3:5810817-5810836 | None:intergenic | 25.0% |
| ! | GTATTCTATAACTACCAATT+TGG | - | chr4_3:5810886-5810905 | None:intergenic | 25.0% |
| ! | GTAGTTATAGAATACTACAA+CGG | + | chr4_3:5810891-5810910 | Msa0626360:intron | 25.0% |
| ! | ATTATTTGGCAAAACTTTGT+AGG | + | chr4_3:5810923-5810942 | Msa0626360:intron | 25.0% |
| ! | AAACTTTGTAGGATATATTG+TGG | + | chr4_3:5810934-5810953 | Msa0626360:intron | 25.0% |
| ! | AACTTTGTAGGATATATTGT+GGG | + | chr4_3:5810935-5810954 | Msa0626360:intron | 25.0% |
| !!! | AATAACTGACTTGCAAAATT+TGG | + | chr4_3:5811125-5811144 | Msa0626360:CDS | 25.0% |
| !!! | AATGGAATGGAATGTTTTTA+AGG | - | chr4_3:5811208-5811227 | None:intergenic | 25.0% |
| ! | TTCTTATGAGAAATATGCAT+GGG | + | chr4_3:5811657-5811676 | Msa0626360:CDS | 25.0% |
| ! | GAATGGTACATGATATAAAT+TGG | + | chr4_3:5811793-5811812 | Msa0626360:intron | 25.0% |
| ! | TCTTGATACACTATACATTA+TGG | + | chr4_3:5811960-5811979 | Msa0626360:CDS | 25.0% |
| ! | CTTGATACACTATACATTAT+GGG | + | chr4_3:5811961-5811980 | Msa0626360:CDS | 25.0% |
| ! | GTATTACTATAAGCATAACT+AGG | - | chr4_3:5812395-5812414 | None:intergenic | 25.0% |
| !! | AACCATAAGGTTACTTTATA+AGG | + | chr4_3:5812485-5812504 | Msa0626360:intron | 25.0% |
| ! | AACCTTATAAAGTAACCTTA+TGG | - | chr4_3:5812490-5812509 | None:intergenic | 25.0% |
| !!! | GACAAGTTGATTATGTTATA+AGG | - | chr4_3:5812744-5812763 | None:intergenic | 25.0% |
| ! | TTGTAGTTAACTTAACATTG+AGG | - | chr4_3:5812881-5812900 | None:intergenic | 25.0% |
| !!! | AAGCTTTAAAGTTAAGATCA+AGG | - | chr4_3:5812957-5812976 | None:intergenic | 25.0% |
| !!! | TTGATCTTAACTTTAAAGCT+TGG | + | chr4_3:5812956-5812975 | Msa0626360:intron | 25.0% |
| !! | TTGGATGAGTTTTTAATAGA+AGG | + | chr4_3:5813078-5813097 | Msa0626360:intron | 25.0% |
| !! | TTTCATGATTATCTTTTGCT+TGG | + | chr4_3:5813214-5813233 | Msa0626360:intron | 25.0% |
| !!! | ACTGATTTCTAATTTTATCC+GGG | + | chr4_3:5813312-5813331 | Msa0626360:intron | 25.0% |
| ! | CCTGTAAAAAACTGAATATA+TGG | - | chr4_3:5813684-5813703 | None:intergenic | 25.0% |
| !!! | CCATATATTCAGTTTTTTAC+AGG | + | chr4_3:5813681-5813700 | Msa0626360:intron | 25.0% |
| ! | AATAAAACATTTCCTGATGA+TGG | + | chr4_3:5813790-5813809 | Msa0626360:CDS | 25.0% |
| ! | CTATGAGGATTAATATAGAT+AGG | - | chr4_3:5813823-5813842 | None:intergenic | 25.0% |
| ! | ATCTATATTAATCCTCATAG+CGG | + | chr4_3:5813823-5813842 | Msa0626360:CDS | 25.0% |
| ! | TCTTATTCTGTGTGTTAATT+TGG | + | chr4_3:5813988-5814007 | Msa0626360:intron | 25.0% |
| ! | GTATTCATAAAAACTGCAAT+TGG | - | chr4_3:5814032-5814051 | None:intergenic | 25.0% |
| ! | ATGAATACTTGCTTAAAGTT+TGG | + | chr4_3:5814044-5814063 | Msa0626360:CDS | 25.0% |
| ! | TGAATACTTGCTTAAAGTTT+GGG | + | chr4_3:5814045-5814064 | Msa0626360:CDS | 25.0% |
| ! | TGTATAAAACATGATGAAGT+AGG | - | chr4_3:5814125-5814144 | None:intergenic | 25.0% |
| ! | CTATCATTCAAATGACAATT+TGG | - | chr4_3:5814165-5814184 | None:intergenic | 25.0% |
| ! | TCATTTGAATGATAGTTCAT+TGG | + | chr4_3:5814170-5814189 | Msa0626360:intron | 25.0% |
| ! | CATATATAAGTAAAGGAAGA+CGG | - | chr4_3:5814413-5814432 | None:intergenic | 25.0% |
| ! | CTTCTCACATATATAAGTAA+AGG | - | chr4_3:5814420-5814439 | None:intergenic | 25.0% |
| ! | AATGCAATATCATACTTTGT+CGG | - | chr4_3:5814459-5814478 | None:intergenic | 25.0% |
| ! | TATCATAAACACTTATGAGA+TGG | - | chr4_3:5814972-5814991 | None:intergenic | 25.0% |
| !! | AGAACTATTTCTTTCATTCT+GGG | + | chr4_3:5815146-5815165 | Msa0626360:CDS | 25.0% |
| !! | CAAAAATCTTTTCCTAGAAT+AGG | + | chr4_3:5815819-5815838 | Msa0626360:CDS | 25.0% |
| ! | CTTCAAATGATGAGTAATAT+AGG | + | chr4_3:5816025-5816044 | Msa0626360:three_prime_UTR | 25.0% |
| ! | ATTATGACTAAAATAGGTTG+TGG | + | chr4_3:5816131-5816150 | Msa0626360:intron | 25.0% |
| ! | TATGAAATGCACTCAAAATT+TGG | - | chr4_3:5816180-5816199 | None:intergenic | 25.0% |
| ! | CTTATAGTATCTGTATTCTA+TGG | - | chr4_3:5816241-5816260 | None:intergenic | 25.0% |
| ! | GAATTTGTTTGTCTGATGAA+GGG | - | chr4_3:5809458-5809477 | None:intergenic | 30.0% |
| TTCAATTTCCCTTGTCTTTA+AGG | + | chr4_3:5809509-5809528 | Msa0626360:five_prime_UTR | 30.0% | |
| CAAATGAAGAAATACATACC+TGG | - | chr4_3:5809758-5809777 | None:intergenic | 30.0% | |
| AAACTAAGAGCTAATCCAAA+TGG | - | chr4_3:5810130-5810149 | None:intergenic | 30.0% | |
| !! | TTGGATTAGCTCTTAGTTTA+TGG | + | chr4_3:5810131-5810150 | Msa0626360:intron | 30.0% |
| !! | TGGATTAGCTCTTAGTTTAT+GGG | + | chr4_3:5810132-5810151 | Msa0626360:intron | 30.0% |
| !! | AGAAGAGTGTTGTTAAATAG+AGG | + | chr4_3:5810193-5810212 | Msa0626360:intron | 30.0% |
| TTGTTAAATAGAGGCTATGA+TGG | + | chr4_3:5810202-5810221 | Msa0626360:intron | 30.0% | |
| TTCATAAGTACTTCTTGAGA+AGG | + | chr4_3:5810695-5810714 | Msa0626360:intron | 30.0% | |
| ! | TATAGCTATCATACTTTTGG+AGG | + | chr4_3:5810722-5810741 | Msa0626360:intron | 30.0% |
| CGTATATGCAAAATTGAGTA+TGG | + | chr4_3:5810750-5810769 | Msa0626360:intron | 30.0% | |
| TACAAGATAATGAGTAGTTG+TGG | + | chr4_3:5810831-5810850 | Msa0626360:intron | 30.0% | |
| TAACTACCAATTTGGTTGTT+TGG | - | chr4_3:5810878-5810897 | None:intergenic | 30.0% | |
| TTATAGAATACTACAACGGT+GGG | + | chr4_3:5810895-5810914 | Msa0626360:intron | 30.0% | |
| !! | TTTTTGGCACTTGAATAACT+AGG | + | chr4_3:5811035-5811054 | Msa0626360:intron | 30.0% |
| ATTGGCAAAATGAAATGGAA+TGG | - | chr4_3:5811221-5811240 | None:intergenic | 30.0% | |
| AATGAAAAGAAGGAATGAGA+TGG | + | chr4_3:5811248-5811267 | Msa0626360:intron | 30.0% | |
| ! | GTTTTCAATCAGTACAAAGT+AGG | - | chr4_3:5811305-5811324 | None:intergenic | 30.0% |
| GTTCTTATGAGAAATATGCA+TGG | + | chr4_3:5811656-5811675 | Msa0626360:CDS | 30.0% | |
| TCTTATGAGAAATATGCATG+GGG | + | chr4_3:5811658-5811677 | Msa0626360:CDS | 30.0% | |
| ACTGATTGTATCTTCTTGAA+TGG | + | chr4_3:5811776-5811795 | Msa0626360:intron | 30.0% | |
| ! | AAACAAATATAGAGGTGTGA+CGG | - | chr4_3:5812076-5812095 | None:intergenic | 30.0% |
| ! | TGTTTAGAATCATAGTGATC+AGG | + | chr4_3:5812091-5812110 | Msa0626360:intron | 30.0% |
| !! | GTTATGGTGTTTAACTTGTA+TGG | + | chr4_3:5812231-5812250 | Msa0626360:intron | 30.0% |
| GCAGCAATAAAGAGTTAAAT+AGG | - | chr4_3:5812285-5812304 | None:intergenic | 30.0% | |
| TAATACATTATCCTTACAGC+TGG | + | chr4_3:5812409-5812428 | Msa0626360:intron | 30.0% | |
| AATACATTATCCTTACAGCT+GGG | + | chr4_3:5812410-5812429 | Msa0626360:intron | 30.0% | |
| !! | AAACTCTCTGGATTTTAACA+AGG | + | chr4_3:5812437-5812456 | Msa0626360:CDS | 30.0% |
| AAAGATCGTATGTACTAAGA+AGG | - | chr4_3:5812641-5812660 | None:intergenic | 30.0% | |
| ATGTTATAAGGAATTCCTGT+AGG | - | chr4_3:5812732-5812751 | None:intergenic | 30.0% | |
| TAACATAATCAACTTGTCAC+AGG | + | chr4_3:5812746-5812765 | Msa0626360:CDS | 30.0% | |
| AACATAATCAACTTGTCACA+GGG | + | chr4_3:5812747-5812766 | Msa0626360:CDS | 30.0% | |
| ACAGTGAACACTTAAGATTT+AGG | + | chr4_3:5812832-5812851 | Msa0626360:intron | 30.0% | |
| ! | ATTTTGTATCCAAAGAGATG+TGG | + | chr4_3:5812915-5812934 | Msa0626360:intron | 30.0% |
| !! | ACTTTAAAGCTTGGATATTG+TGG | + | chr4_3:5812965-5812984 | Msa0626360:intron | 30.0% |
| !! | CTTCTATTTTGTGCTTTGTT+TGG | + | chr4_3:5813059-5813078 | Msa0626360:intron | 30.0% |
| TGATCAATACTTAGCAAGAA+AGG | - | chr4_3:5813284-5813303 | None:intergenic | 30.0% | |
| ! | CTGATTTCTAATTTTATCCG+GGG | + | chr4_3:5813313-5813332 | Msa0626360:intron | 30.0% |
| CATCTCCATATTTGTATTAG+AGG | + | chr4_3:5813347-5813366 | Msa0626360:intron | 30.0% | |
| !! | TAGTTTTTGATTCTTGACTC+TGG | + | chr4_3:5813482-5813501 | Msa0626360:intron | 30.0% |
| ! | AGCAATGAATTCTAGTTGTT+CGG | - | chr4_3:5813606-5813625 | None:intergenic | 30.0% |
| AATTCATTGCTCTATCTCAA+AGG | + | chr4_3:5813615-5813634 | Msa0626360:CDS | 30.0% | |
| AGAATTTAAAAACCTTCTGC+TGG | - | chr4_3:5813658-5813677 | None:intergenic | 30.0% | |
| !! | TTTTCTAGCAATGCATCAAT+TGG | + | chr4_3:5813723-5813742 | Msa0626360:intron | 30.0% |
| TGCATTAGTTAGTACTATCT+GGG | + | chr4_3:5813946-5813965 | Msa0626360:intron | 30.0% | |
| ATAAAACATGATGAAGTAGG+TGG | - | chr4_3:5814122-5814141 | None:intergenic | 30.0% | |
| !! | ATCTCTAAAACAGAGATATG+TGG | + | chr4_3:5814342-5814361 | Msa0626360:intron | 30.0% |
| !! | TCTCTAAAACAGAGATATGT+GGG | + | chr4_3:5814343-5814362 | Msa0626360:intron | 30.0% |
| ATGTGGGAAAAATCAATGAA+AGG | + | chr4_3:5814359-5814378 | Msa0626360:CDS | 30.0% | |
| ACTTATATATGTGAGAAGAG+TGG | + | chr4_3:5814422-5814441 | Msa0626360:CDS | 30.0% | |
| ATGATATTGCATTGCAATAC+TGG | + | chr4_3:5814466-5814485 | Msa0626360:intron | 30.0% | |
| ACTTTCATCCAATACATCAA+TGG | - | chr4_3:5814513-5814532 | None:intergenic | 30.0% | |
| ATAAACTTCTGTGAATCATC+AGG | - | chr4_3:5814627-5814646 | None:intergenic | 30.0% | |
| TCAACAGAATAAGCACATTA+AGG | - | chr4_3:5814694-5814713 | None:intergenic | 30.0% | |
| !! | CATGGCTTTAGTATATTGAT+AGG | - | chr4_3:5814737-5814756 | None:intergenic | 30.0% |
| CAATATACTAAAGCCATGTT+TGG | + | chr4_3:5814739-5814758 | Msa0626360:intron | 30.0% | |
| ! | TTATGCTGTTTATCCAAACA+TGG | - | chr4_3:5814755-5814774 | None:intergenic | 30.0% |
| ! | GGTTTTCATAAACTATCACA+CGG | + | chr4_3:5814876-5814895 | Msa0626360:intron | 30.0% |
| TGAGTACAACTTCTTAAAGA+TGG | - | chr4_3:5815054-5815073 | None:intergenic | 30.0% | |
| ! | GAGAACTATTTCTTTCATTC+TGG | + | chr4_3:5815145-5815164 | Msa0626360:CDS | 30.0% |
| ! | GAACTATTTCTTTCATTCTG+GGG | + | chr4_3:5815147-5815166 | Msa0626360:CDS | 30.0% |
| GACGCACATAGTATTAATTT+GGG | - | chr4_3:5815565-5815584 | None:intergenic | 30.0% | |
| TGACGCACATAGTATTAATT+TGG | - | chr4_3:5815566-5815585 | None:intergenic | 30.0% | |
| TTGAATACCCATTCATCTAA+TGG | - | chr4_3:5815729-5815748 | None:intergenic | 30.0% | |
| ! | TTCTCATTTGAGTTCTTAAC+AGG | - | chr4_3:5815798-5815817 | None:intergenic | 30.0% |
| ! | AAATCTTTTCCTAGAATAGG+TGG | + | chr4_3:5815822-5815841 | Msa0626360:CDS | 30.0% |
| GTCTTCATATCTTGCAAAAT+GGG | + | chr4_3:5816060-5816079 | Msa0626360:intron | 30.0% | |
| ! | TTGCAAAATGGGTTTATTCA+AGG | + | chr4_3:5816071-5816090 | Msa0626360:intron | 30.0% |
| !!! | GGCCCTTAATTTTATTTTTG+TGG | + | chr4_3:5816152-5816171 | Msa0626360:three_prime_UTR | 30.0% |
| ATACATGATTTATGTAACCG+AGG | + | chr4_3:5816197-5816216 | Msa0626360:three_prime_UTR | 30.0% | |
| !!! | GACTTGACTTTGGTTTTCTA+CGG | - | chr4_3:5809292-5809311 | None:intergenic | 35.0% |
| ! | CGAATTTGTTTGTCTGATGA+AGG | - | chr4_3:5809459-5809478 | None:intergenic | 35.0% |
| CCAAACAACCTTAAAGACAA+GGG | - | chr4_3:5809520-5809539 | None:intergenic | 35.0% | |
| ACCAAACAACCTTAAAGACA+AGG | - | chr4_3:5809521-5809540 | None:intergenic | 35.0% | |
| CAACGTTGTTGTAAATTCGA+AGG | + | chr4_3:5809551-5809570 | Msa0626360:five_prime_UTR | 35.0% | |
| ATCTTTGTAAAATGGCGAGA+GGG | + | chr4_3:5809583-5809602 | Msa0626360:exon | 35.0% | |
| TGAGTAGTAGTAGCAGTAAA+TGG | + | chr4_3:5809616-5809635 | Msa0626360:CDS | 35.0% | |
| AACTTTAGTCAGAGAATACC+AGG | + | chr4_3:5809737-5809756 | Msa0626360:CDS | 35.0% | |
| CTTCTGATATATTATCGGTG+TGG | + | chr4_3:5809940-5809959 | Msa0626360:intron | 35.0% | |
| ATTGCTTACGAAGATCATGT+AGG | + | chr4_3:5810008-5810027 | Msa0626360:intron | 35.0% | |
| GTAGGATTTGTAAGAAGCAA+AGG | + | chr4_3:5810026-5810045 | Msa0626360:intron | 35.0% | |
| GGGTGCTTCTTAGATAAAAT+AGG | + | chr4_3:5810152-5810171 | Msa0626360:intron | 35.0% | |
| CTAAGCAGTATTATCATTCG+CGG | - | chr4_3:5810370-5810389 | None:intergenic | 35.0% | |
| TGATACTGACATGTGAACAT+CGG | + | chr4_3:5810550-5810569 | Msa0626360:intron | 35.0% | |
| AATTGAATCCACATGTGCAT+TGG | + | chr4_3:5810595-5810614 | Msa0626360:intron | 35.0% | |
| ! | TCAGACTATAGGTTGAGAAT+AGG | + | chr4_3:5810784-5810803 | Msa0626360:intron | 35.0% |
| ! | CAGACTATAGGTTGAGAATA+GGG | + | chr4_3:5810785-5810804 | Msa0626360:intron | 35.0% |
| GTTATAGAATACTACAACGG+TGG | + | chr4_3:5810894-5810913 | Msa0626360:intron | 35.0% | |
| CAATCAGTACAAAGTAGGAA+TGG | - | chr4_3:5811300-5811319 | None:intergenic | 35.0% | |
| GCAATTGGAATTGTTTCAGT+TGG | + | chr4_3:5811489-5811508 | Msa0626360:intron | 35.0% | |
| GAAGAGTCAAATAAAGTGCA+CGG | + | chr4_3:5811511-5811530 | Msa0626360:CDS | 35.0% | |
| ATCATCCAAGACTTCTTTAG+TGG | - | chr4_3:5811581-5811600 | None:intergenic | 35.0% | |
| !!! | CTTTTACTTTTTCCCTTCTC+TGG | - | chr4_3:5811615-5811634 | None:intergenic | 35.0% |
| AATGATCTAATGGAGTGATG+TGG | + | chr4_3:5811720-5811739 | Msa0626360:intron | 35.0% | |
| AATGGAGTGATGTGGTTATT+TGG | + | chr4_3:5811728-5811747 | Msa0626360:intron | 35.0% | |
| ! | AAAAGTGGTGTCAATAGCTT+TGG | + | chr4_3:5811910-5811929 | Msa0626360:CDS | 35.0% |
| AAAAGGTTACACTTACTCTC+GGG | - | chr4_3:5812010-5812029 | None:intergenic | 35.0% | |
| GAAAAGGTTACACTTACTCT+CGG | - | chr4_3:5812011-5812030 | None:intergenic | 35.0% | |
| ! | TGTTCTAGACGAACATTTCA+TGG | + | chr4_3:5812209-5812228 | Msa0626360:intron | 35.0% |
| AGACGAACATTTCATGGTTA+TGG | + | chr4_3:5812215-5812234 | Msa0626360:intron | 35.0% | |
| CTTAGTACATACGATCTTTC+AGG | + | chr4_3:5812642-5812661 | Msa0626360:CDS | 35.0% | |
| ! | ATACTGTTTTCATGCTCCAT+AGG | + | chr4_3:5812855-5812874 | Msa0626360:intron | 35.0% |
| TAACTTAACATTGAGGCCTA+TGG | - | chr4_3:5812874-5812893 | None:intergenic | 35.0% | |
| ! | CAAAGAGATGTGGCTTTTAT+GGG | + | chr4_3:5812925-5812944 | Msa0626360:intron | 35.0% |
| ! | TTGTACTAGCTTGATGACAT+TGG | + | chr4_3:5813034-5813053 | Msa0626360:intron | 35.0% |
| !!! | GAGATGAAATACTTTTTCCC+CGG | - | chr4_3:5813333-5813352 | None:intergenic | 35.0% |
| CCATGCCTCTAATACAAATA+TGG | - | chr4_3:5813355-5813374 | None:intergenic | 35.0% | |
| CCATATTTGTATTAGAGGCA+TGG | + | chr4_3:5813352-5813371 | Msa0626360:intron | 35.0% | |
| !! | TGTATTAGAGGCATGGATTT+TGG | + | chr4_3:5813359-5813378 | Msa0626360:intron | 35.0% |
| ! | TCATTCACATGCCTGATTTT+AGG | + | chr4_3:5813401-5813420 | Msa0626360:intron | 35.0% |
| ! | GAAAGCTTTGTCCTAAAATC+AGG | - | chr4_3:5813415-5813434 | None:intergenic | 35.0% |
| !! | GCTTTCTATGTTAGTTCTAC+TGG | + | chr4_3:5813429-5813448 | Msa0626360:intron | 35.0% |
| !!! | TTTCAAGGGTGAGAGTATTT+TGG | + | chr4_3:5813568-5813587 | Msa0626360:intron | 35.0% |
| !!! | TTCAGTTTTTTACAGGGAAG+CGG | + | chr4_3:5813688-5813707 | Msa0626360:intron | 35.0% |
| ATTCTCGACCTGAAAAAGTA+GGG | - | chr4_3:5813755-5813774 | None:intergenic | 35.0% | |
| ATAGGAAGTAATCCATCATC+AGG | - | chr4_3:5813805-5813824 | None:intergenic | 35.0% | |
| CTGCATTAGTTAGTACTATC+TGG | + | chr4_3:5813945-5813964 | Msa0626360:intron | 35.0% | |
| TTGCTTAAAGTTTGGGTACA+GGG | + | chr4_3:5814052-5814071 | Msa0626360:CDS | 35.0% | |
| CTCCAGCTGTAAAACTTTAT+AGG | + | chr4_3:5814083-5814102 | Msa0626360:CDS | 35.0% | |
| ! | CACCTATAAAGTTTTACAGC+TGG | - | chr4_3:5814088-5814107 | None:intergenic | 35.0% |
| AAGGTCTGCTAAGTTTGATT+CGG | + | chr4_3:5814378-5814397 | Msa0626360:CDS | 35.0% | |
| TATATATGTGAGAAGAGTGG+AGG | + | chr4_3:5814425-5814444 | Msa0626360:CDS | 35.0% | |
| ! | GCACATTAAGGCTTTTCAAA+TGG | - | chr4_3:5814682-5814701 | None:intergenic | 35.0% |
| AGTAAGCTGAAAACAGCTTA+TGG | + | chr4_3:5814911-5814930 | Msa0626360:intron | 35.0% | |
| AGATGGTTTAGAAGAGGTTA+TGG | - | chr4_3:5814955-5814974 | None:intergenic | 35.0% | |
| CTTATGAGATGGTTTAGAAG+AGG | - | chr4_3:5814961-5814980 | None:intergenic | 35.0% | |
| !! | CCAATTTTGTTGGAGTTGAT+TGG | - | chr4_3:5815120-5815139 | None:intergenic | 35.0% |
| CCAATCAACTCCAACAAAAT+TGG | + | chr4_3:5815117-5815136 | Msa0626360:CDS | 35.0% | |
| !! | AATTTTCAAGGACATGAGTG+TGG | + | chr4_3:5815235-5815254 | Msa0626360:intron | 35.0% |
| !! | ATTTTCAAGGACATGAGTGT+GGG | + | chr4_3:5815236-5815255 | Msa0626360:intron | 35.0% |
| ! | TTGAGTCACTCTTTTACCTT+TGG | + | chr4_3:5815291-5815310 | Msa0626360:CDS | 35.0% |
| GGTCATTCCATTAGATGAAT+GGG | + | chr4_3:5815719-5815738 | Msa0626360:CDS | 35.0% | |
| TCTTTGAATCTTGGTTGAAG+TGG | - | chr4_3:5815912-5815931 | None:intergenic | 35.0% | |
| AATTCCTCGTCTTTGAATCT+TGG | - | chr4_3:5815921-5815940 | None:intergenic | 35.0% | |
| ! | ACGAGGAATTTGTTCCATTA+TGG | + | chr4_3:5815931-5815950 | Msa0626360:three_prime_UTR | 35.0% |
| ACATCTTACAAGCTCCATAA+TGG | - | chr4_3:5815948-5815967 | None:intergenic | 35.0% | |
| AGATGTCAGAATTCCTTCAT+TGG | + | chr4_3:5815962-5815981 | Msa0626360:three_prime_UTR | 35.0% | |
| GATGTCAGAATTCCTTCATT+GGG | + | chr4_3:5815963-5815982 | Msa0626360:three_prime_UTR | 35.0% | |
| GGTCTTCATATCTTGCAAAA+TGG | + | chr4_3:5816059-5816078 | Msa0626360:intron | 35.0% | |
| TATGGAATGCGCAGATATAT+AGG | - | chr4_3:5816223-5816242 | None:intergenic | 35.0% | |
| !!! | GACTTTGGTTTTCTACGGAA+TGG | - | chr4_3:5809287-5809306 | None:intergenic | 40.0% |
| CGAAGAAGAAGACTTGACTT+TGG | - | chr4_3:5809302-5809321 | None:intergenic | 40.0% | |
| ! | ATTTTCGAAGCCACTCCTTT+TGG | + | chr4_3:5809363-5809382 | Msa0626360:five_prime_UTR | 40.0% |
| !! | CCCTTGTCTTTAAGGTTGTT+TGG | + | chr4_3:5809517-5809536 | Msa0626360:five_prime_UTR | 40.0% |
| GATCTTTGTAAAATGGCGAG+AGG | + | chr4_3:5809582-5809601 | Msa0626360:exon | 40.0% | |
| ! | AAAAGCATAGCAAGACGCTT+TGG | - | chr4_3:5809675-5809694 | None:intergenic | 40.0% |
| ACTAAGGAGTAAGGACCATT+TGG | + | chr4_3:5810112-5810131 | Msa0626360:intron | 40.0% | |
| !!! | TGTGTAGCTTTTTTGCGTAG+CGG | + | chr4_3:5810315-5810334 | Msa0626360:intron | 40.0% |
| CGCGAATGATAATACTGCTT+AGG | + | chr4_3:5810368-5810387 | Msa0626360:intron | 40.0% | |
| TTCGAAGTTCTCTCATTCAC+CGG | - | chr4_3:5810429-5810448 | None:intergenic | 40.0% | |
| ! | CTTCAAATTGAAGGTGTGTC+TGG | - | chr4_3:5810634-5810653 | None:intergenic | 40.0% |
| TGCTGCTGAAATCAGACTAT+AGG | + | chr4_3:5810773-5810792 | Msa0626360:intron | 40.0% | |
| TACCAATTTGGTTGTTTGGC+AGG | - | chr4_3:5810874-5810893 | None:intergenic | 40.0% | |
| TGAGATGGTCTGCATACATT+TGG | + | chr4_3:5811263-5811282 | Msa0626360:intron | 40.0% | |
| TACAAAGTAGGAATGGTGTC+AGG | - | chr4_3:5811293-5811312 | None:intergenic | 40.0% | |
| TTGTCGTCTGTCAAACAATC+TGG | + | chr4_3:5811337-5811356 | Msa0626360:intron | 40.0% | |
| !! | GGAAAGTGTTCACTTGCTAA+TGG | - | chr4_3:5811386-5811405 | None:intergenic | 40.0% |
| CAAGTCCACTAAAGAAGTCT+TGG | + | chr4_3:5811573-5811592 | Msa0626360:CDS | 40.0% | |
| ATCCCATTGATATCCAGAGA+AGG | + | chr4_3:5811599-5811618 | Msa0626360:CDS | 40.0% | |
| TCCCATTGATATCCAGAGAA+GGG | + | chr4_3:5811600-5811619 | Msa0626360:CDS | 40.0% | |
| TCCCTTCTCTGGATATCAAT+GGG | - | chr4_3:5811604-5811623 | None:intergenic | 40.0% | |
| TTCCCTTCTCTGGATATCAA+TGG | - | chr4_3:5811605-5811624 | None:intergenic | 40.0% | |
| AAGATGCAATGCTTCATGCT+TGG | + | chr4_3:5811632-5811651 | Msa0626360:CDS | 40.0% | |
| GACAAGATGAACTACAGGTA+TGG | + | chr4_3:5811680-5811699 | Msa0626360:intron | 40.0% | |
| !!! | TTGACACCACTTTTTGACTG+TGG | - | chr4_3:5811904-5811923 | None:intergenic | 40.0% |
| AATCAGGTCTTCATATGCAG+GGG | - | chr4_3:5812033-5812052 | None:intergenic | 40.0% | |
| CAATCAGGTCTTCATATGCA+GGG | - | chr4_3:5812034-5812053 | None:intergenic | 40.0% | |
| ACAATCAGGTCTTCATATGC+AGG | - | chr4_3:5812035-5812054 | None:intergenic | 40.0% | |
| !! | GTGTTTTCGAGACAACCATA+AGG | + | chr4_3:5812472-5812491 | Msa0626360:CDS | 40.0% |
| !! | CAATATCTCTAGCTTTGTCG+AGG | - | chr4_3:5812680-5812699 | None:intergenic | 40.0% |
| CCATAAAAGCCACATCTCTT+TGG | - | chr4_3:5812927-5812946 | None:intergenic | 40.0% | |
| ! | CCAAAGAGATGTGGCTTTTA+TGG | + | chr4_3:5812924-5812943 | Msa0626360:intron | 40.0% |
| !!! | GAGAGTATTTTGGCAGATTC+TGG | + | chr4_3:5813578-5813597 | Msa0626360:CDS | 40.0% |
| ATTGCTCTATCTCAAAGGAC+AGG | + | chr4_3:5813620-5813639 | Msa0626360:CDS | 40.0% | |
| AAAACCTTCTGCTGGTACTT+CGG | - | chr4_3:5813650-5813669 | None:intergenic | 40.0% | |
| !!! | TCAGTTTTTTACAGGGAAGC+GGG | + | chr4_3:5813689-5813708 | Msa0626360:intron | 40.0% |
| CATTCTCGACCTGAAAAAGT+AGG | - | chr4_3:5813756-5813775 | None:intergenic | 40.0% | |
| GTGTTAATACCTATCACCCA+TGG | - | chr4_3:5813881-5813900 | None:intergenic | 40.0% | |
| CTTGCTTAAAGTTTGGGTAC+AGG | + | chr4_3:5814051-5814070 | Msa0626360:CDS | 40.0% | |
| TGCTTAAAGTTTGGGTACAG+GGG | + | chr4_3:5814053-5814072 | Msa0626360:CDS | 40.0% | |
| ! | GTTTATGTCACTTGCTGAAG+AGG | + | chr4_3:5814641-5814660 | Msa0626360:CDS | 40.0% |
| ! | GACTTTAATTGCAGCTTGCT+TGG | + | chr4_3:5815077-5815096 | Msa0626360:intron | 40.0% |
| TCAACTCCAACAAAATTGGC+TGG | + | chr4_3:5815121-5815140 | Msa0626360:CDS | 40.0% | |
| ! | TTCTCTCCAGCCAATTTTGT+TGG | - | chr4_3:5815130-5815149 | None:intergenic | 40.0% |
| ! | CTATTTCTTTCATTCTGGGG+AGG | + | chr4_3:5815150-5815169 | Msa0626360:CDS | 40.0% |
| GTACATCATGGAACATCCTA+AGG | + | chr4_3:5815258-5815277 | Msa0626360:CDS | 40.0% | |
| CAACAAGACATACCAAGACT+GGG | + | chr4_3:5815325-5815344 | Msa0626360:CDS | 40.0% | |
| AACAAGACATACCAAGACTG+GGG | + | chr4_3:5815326-5815345 | Msa0626360:CDS | 40.0% | |
| ATATATTCCAACCCCAGTCT+TGG | - | chr4_3:5815340-5815359 | None:intergenic | 40.0% | |
| !!! | GAGACGTTTTTTTTGCCAAG+TGG | - | chr4_3:5815502-5815521 | None:intergenic | 40.0% |
| AGTGTTAACCTGGAAAGTGA+GGG | - | chr4_3:5815619-5815638 | None:intergenic | 40.0% | |
| CTTTAACACCAGTGTTAACC+TGG | - | chr4_3:5815629-5815648 | None:intergenic | 40.0% | |
| GATGCAAAGTTTCTTTCTCG+CGG | + | chr4_3:5815656-5815675 | Msa0626360:CDS | 40.0% | |
| ! | TCTTCTCTTTTCGCCTTCTT+CGG | + | chr4_3:5815698-5815717 | Msa0626360:CDS | 40.0% |
| TCTAATGGAATGACCGAAGA+AGG | - | chr4_3:5815714-5815733 | None:intergenic | 40.0% | |
| CGGTCATTCCATTAGATGAA+TGG | + | chr4_3:5815718-5815737 | Msa0626360:CDS | 40.0% | |
| TCCTTGTCACAATCCTCAAA+GGG | - | chr4_3:5815764-5815783 | None:intergenic | 40.0% | |
| TTCCTTGTCACAATCCTCAA+AGG | - | chr4_3:5815765-5815784 | None:intergenic | 40.0% | |
| TCATGGTAGACAAGCATGAA+CGG | - | chr4_3:5815877-5815896 | None:intergenic | 40.0% | |
| AGTGGTTCATCAACTAGTCA+TGG | - | chr4_3:5815894-5815913 | None:intergenic | 40.0% | |
| TCAACCAAGATTCAAAGACG+AGG | + | chr4_3:5815914-5815933 | Msa0626360:three_prime_UTR | 40.0% | |
| TCACAATTGCTTCCCAATGA+AGG | - | chr4_3:5815978-5815997 | None:intergenic | 40.0% | |
| TTGGGAAGCAATTGTGAAAC+AGG | + | chr4_3:5815981-5816000 | Msa0626360:three_prime_UTR | 40.0% | |
| TGGGTTTATTCAAGGTGACT+TGG | + | chr4_3:5816079-5816098 | Msa0626360:intron | 40.0% | |
| AGGGTCAGTCATCAACAAAA+AGG | - | chr4_3:5816105-5816124 | None:intergenic | 40.0% | |
| !!! | TTGTTGATGACTGACCCTTT+TGG | + | chr4_3:5816107-5816126 | Msa0626360:intron | 40.0% |
| GACAACGAAGCCAATCCAAA+AGG | - | chr4_3:5809381-5809400 | None:intergenic | 45.0% | |
| GGACGCTTCAAGTAATAAGC+TGG | - | chr4_3:5809654-5809673 | None:intergenic | 45.0% | |
| ACACCGACACTTCTGATTGA+AGG | + | chr4_3:5809853-5809872 | Msa0626360:intron | 45.0% | |
| ! | ACGCCTTCAATCAGAAGTGT+CGG | - | chr4_3:5809859-5809878 | None:intergenic | 45.0% |
| !!! | GTGTAGCTTTTTTGCGTAGC+GGG | + | chr4_3:5810316-5810335 | Msa0626360:intron | 45.0% |
| GTCAGTATCACTGTCATGTC+CGG | - | chr4_3:5810540-5810559 | None:intergenic | 45.0% | |
| GCAACGACGCTTCAAATTGA+AGG | - | chr4_3:5810643-5810662 | None:intergenic | 45.0% | |
| CTCCTGCCAAACAACCAAAT+TGG | + | chr4_3:5810869-5810888 | Msa0626360:intron | 45.0% | |
| !! | AACGGTGGGTGCTGATTATT+TGG | + | chr4_3:5810909-5810928 | Msa0626360:intron | 45.0% |
| TGACAGACGACAATTCACGT+CGG | - | chr4_3:5811330-5811349 | None:intergenic | 45.0% | |
| GCAAGTGAACACTTTCCTTG+TGG | + | chr4_3:5811389-5811408 | Msa0626360:intron | 45.0% | |
| TTTCCTTGTGGCTGTGTTAC+AGG | + | chr4_3:5811401-5811420 | Msa0626360:intron | 45.0% | |
| TTCCTTGTGGCTGTGTTACA+GGG | + | chr4_3:5811402-5811421 | Msa0626360:intron | 45.0% | |
| ! | TTCTTTGGGGGCTAAGCAAT+TGG | + | chr4_3:5811474-5811493 | Msa0626360:intron | 45.0% |
| GAGTCAAATAAAGTGCACGG+TGG | + | chr4_3:5811514-5811533 | Msa0626360:CDS | 45.0% | |
| ATGGGGACAAGATGAACTAC+AGG | + | chr4_3:5811675-5811694 | Msa0626360:CDS | 45.0% | |
| TACCAGCCACAGTCAAAAAG+TGG | + | chr4_3:5811895-5811914 | Msa0626360:intron | 45.0% | |
| !! | AGTGGTGTCAATAGCTTTGG+AGG | + | chr4_3:5811913-5811932 | Msa0626360:CDS | 45.0% |
| !! | GTCAATAGCTTTGGAGGTCT+TGG | + | chr4_3:5811919-5811938 | Msa0626360:CDS | 45.0% |
| GTCTTCATATGCAGGGGAAA+AGG | - | chr4_3:5812027-5812046 | None:intergenic | 45.0% | |
| TCACCACAATCCAGAGTAGT+AGG | + | chr4_3:5812612-5812631 | Msa0626360:intron | 45.0% | |
| CAGATAGATTACTGCCTGCA+TGG | + | chr4_3:5812700-5812719 | Msa0626360:CDS | 45.0% | |
| ATTCTTGACTCTGGCTGTGT+TGG | + | chr4_3:5813491-5813510 | Msa0626360:intron | 45.0% | |
| AAACCTTCTGCTGGTACTTC+GGG | - | chr4_3:5813649-5813668 | None:intergenic | 45.0% | |
| !!! | GGTTTGCTCCCTACTTTTTC+AGG | + | chr4_3:5813744-5813763 | Msa0626360:intron | 45.0% |
| ! | AATCCTCATAGCGGAACAAC+AGG | + | chr4_3:5813832-5813851 | Msa0626360:CDS | 45.0% |
| GGCTACTCTCCTATCACATT+TGG | + | chr4_3:5813853-5813872 | Msa0626360:CDS | 45.0% | |
| TTCATCCATCTGCAGGTACT+CGG | - | chr4_3:5814553-5814572 | None:intergenic | 45.0% | |
| !! | ATGATTGCTTTGGGATCGTC+TGG | + | chr4_3:5814594-5814613 | Msa0626360:CDS | 45.0% |
| ACATGAGTGTGGGTACATCA+TGG | + | chr4_3:5815246-5815265 | Msa0626360:CDS | 45.0% | |
| AAGAGTGACTCAACTGTCTC+TGG | - | chr4_3:5815284-5815303 | None:intergenic | 45.0% | |
| ! | TTTTACCTTTGGCGCCTAAC+CGG | + | chr4_3:5815302-5815321 | Msa0626360:CDS | 45.0% |
| ! | GTCTTGGTATGTCTTGTTGC+CGG | - | chr4_3:5815324-5815343 | None:intergenic | 45.0% |
| GCAACAAGACATACCAAGAC+TGG | + | chr4_3:5815324-5815343 | Msa0626360:CDS | 45.0% | |
| AAGAACTCTCGCATAGAGTC+TGG | + | chr4_3:5815374-5815393 | Msa0626360:CDS | 45.0% | |
| GTCTGGCTATGTTGGACTAA+AGG | + | chr4_3:5815391-5815410 | Msa0626360:CDS | 45.0% | |
| TTGCCAAGTGGCACTCAATA+CGG | - | chr4_3:5815490-5815509 | None:intergenic | 45.0% | |
| ATGTTGTTCCCTCACTTTCC+AGG | + | chr4_3:5815608-5815627 | Msa0626360:intron | 45.0% | |
| CAGTGTTAACCTGGAAAGTG+AGG | - | chr4_3:5815620-5815639 | None:intergenic | 45.0% | |
| CTCACTTTCCAGGTTAACAC+TGG | + | chr4_3:5815618-5815637 | Msa0626360:intron | 45.0% | |
| ! | ACCCTTTGAGGATTGTGACA+AGG | + | chr4_3:5815760-5815779 | Msa0626360:CDS | 45.0% |
| GATTGTGACAAGGAACGAAG+CGG | + | chr4_3:5815770-5815789 | Msa0626360:CDS | 45.0% | |
| TCCTAGAATAGGTGGCAGAA+AGG | + | chr4_3:5815830-5815849 | Msa0626360:CDS | 45.0% | |
| TCCTTTCTGCCACCTATTCT+AGG | - | chr4_3:5815834-5815853 | None:intergenic | 45.0% | |
| AGAATAGGTGGCAGAAAGGA+AGG | + | chr4_3:5815834-5815853 | Msa0626360:CDS | 45.0% | |
| ATGCGCAGATATATAGGCCT+CGG | - | chr4_3:5816217-5816236 | None:intergenic | 45.0% | |
| !!! | TATTTTTATTATTTTTTCTT+TGG | + | chr4_3:5811459-5811478 | Msa0626360:intron | 5.0% |
| !!! | ATTTTTATTATTTTTTCTTT+GGG | + | chr4_3:5811460-5811479 | Msa0626360:intron | 5.0% |
| !! | TTTGAAAATAAAAAATTATA+AGG | - | chr4_3:5814246-5814265 | None:intergenic | 5.0% |
| !! | ATTTATTAAAAAAAATAAAG+TGG | - | chr4_3:5815535-5815554 | None:intergenic | 5.0% |
| ! | CGAAGCCACTCCTTTTGGAT+TGG | + | chr4_3:5809368-5809387 | Msa0626360:five_prime_UTR | 50.0% |
| CGAAGCCAATCCAAAAGGAG+TGG | - | chr4_3:5809376-5809395 | None:intergenic | 50.0% | |
| ! | TGTCTGTGTCGGTGCTTCAT+AGG | - | chr4_3:5810511-5810530 | None:intergenic | 50.0% |
| ACCGACACAGACAAGTACAC+CGG | + | chr4_3:5810518-5810537 | Msa0626360:intron | 50.0% | |
| TCCGGTGTACTTGTCTGTGT+CGG | - | chr4_3:5810522-5810541 | None:intergenic | 50.0% | |
| GACACATGCCAATGCACATG+TGG | - | chr4_3:5810606-5810625 | None:intergenic | 50.0% | |
| ! | TGCCAGGAAGCTTGACTTGA+AGG | + | chr4_3:5811540-5811559 | Msa0626360:CDS | 50.0% |
| ! | GCCAGGAAGCTTGACTTGAA+GGG | + | chr4_3:5811541-5811560 | Msa0626360:CDS | 50.0% |
| TCCCTTCAAGTCAAGCTTCC+TGG | - | chr4_3:5811545-5811564 | None:intergenic | 50.0% | |
| !!! | CACCACTTTTTGACTGTGGC+TGG | - | chr4_3:5811900-5811919 | None:intergenic | 50.0% |
| CCACCTACTACTCTGGATTG+TGG | - | chr4_3:5812618-5812637 | None:intergenic | 50.0% | |
| CCACAATCCAGAGTAGTAGG+TGG | + | chr4_3:5812615-5812634 | Msa0626360:intron | 50.0% | |
| AAGAAGGCCACCTACTACTC+TGG | - | chr4_3:5812625-5812644 | None:intergenic | 50.0% | |
| ! | CACACAATCCTGGATGGACT+GGG | + | chr4_3:5812775-5812794 | Msa0626360:CDS | 50.0% |
| !! | ACACAATCCTGGATGGACTG+GGG | + | chr4_3:5812776-5812795 | Msa0626360:CDS | 50.0% |
| AAACTTACCCCAGTCCATCC+AGG | - | chr4_3:5812786-5812805 | None:intergenic | 50.0% | |
| !!! | GTTTTTTACAGGGAAGCGGG+AGG | + | chr4_3:5813692-5813711 | Msa0626360:intron | 50.0% |
| TAGCCTGTTGTTCCGCTATG+AGG | - | chr4_3:5813838-5813857 | None:intergenic | 50.0% | |
| TCCTATCACATTTGGCGCCA+TGG | + | chr4_3:5813861-5813880 | Msa0626360:CDS | 50.0% | |
| CCTATCACATTTGGCGCCAT+GGG | + | chr4_3:5813862-5813881 | Msa0626360:CDS | 50.0% | |
| TTCAACCGAGTACCTGCAGA+TGG | + | chr4_3:5814545-5814564 | Msa0626360:intron | 50.0% | |
| ACGCTAGTTCATCCATCTGC+AGG | - | chr4_3:5814560-5814579 | None:intergenic | 50.0% | |
| AACTAGCGTGCTTTGCTCCA+GGG | + | chr4_3:5814571-5814590 | Msa0626360:CDS | 50.0% | |
| TGCTCCAGGGATGATTGCTT+TGG | + | chr4_3:5814584-5814603 | Msa0626360:CDS | 50.0% | |
| GCTCCAGGGATGATTGCTTT+GGG | + | chr4_3:5814585-5814604 | Msa0626360:CDS | 50.0% | |
| GATCCCAAAGCAATCATCCC+TGG | - | chr4_3:5814591-5814610 | None:intergenic | 50.0% | |
| !! | GCTTTGGGATCGTCTGGTTA+TGG | + | chr4_3:5814600-5814619 | Msa0626360:CDS | 50.0% |
| ! | ACTCAACTGTCTCTGGCCTT+AGG | - | chr4_3:5815277-5815296 | None:intergenic | 50.0% |
| ! | GGTATGTCTTGTTGCCGGTT+AGG | - | chr4_3:5815319-5815338 | None:intergenic | 50.0% |
| AGACATACCAAGACTGGGGT+TGG | + | chr4_3:5815330-5815349 | Msa0626360:CDS | 50.0% | |
| CGCATAGAGTCTGGCTATGT+TGG | + | chr4_3:5815383-5815402 | Msa0626360:CDS | 50.0% | |
| TGCCAAGTGGCACTCAATAC+GGG | - | chr4_3:5815489-5815508 | None:intergenic | 50.0% | |
| ! | ACACAGAAGCACACCCTTTG+AGG | + | chr4_3:5815748-5815767 | Msa0626360:CDS | 50.0% |
| TAGGTGGCAGAAAGGAAGGT+CGG | + | chr4_3:5815838-5815857 | Msa0626360:CDS | 50.0% | |
| CAGACGACAATTCACGTCGG+AGG | - | chr4_3:5811327-5811346 | None:intergenic | 55.0% | |
| TGCCCTGTAACACAGCCACA+AGG | - | chr4_3:5811407-5811426 | None:intergenic | 55.0% | |
| GAGTTTGCGACCCAGCTGTA+AGG | - | chr4_3:5812423-5812442 | None:intergenic | 55.0% | |
| CCTGTAGGTGTGTTCCATGC+AGG | - | chr4_3:5812717-5812736 | None:intergenic | 55.0% | |
| CCTGCATGGAACACACCTAC+AGG | + | chr4_3:5812714-5812733 | Msa0626360:CDS | 55.0% | |
| GACGTGCACACAATCCTGGA+TGG | + | chr4_3:5812769-5812788 | Msa0626360:CDS | 55.0% | |
| GCACACAATCCTGGATGGAC+TGG | + | chr4_3:5812774-5812793 | Msa0626360:CDS | 55.0% | |
| ! | GACTCTGGCTGTGTTGGTCA+CGG | + | chr4_3:5813497-5813516 | Msa0626360:intron | 55.0% |
| ! | AGACCCGAAGTACCAGCAGA+AGG | + | chr4_3:5813643-5813662 | Msa0626360:CDS | 55.0% |
| CCCATGGCGCCAAATGTGAT+AGG | - | chr4_3:5813865-5813884 | None:intergenic | 55.0% | |
| CATTTGGCGCCATGGGTGAT+AGG | + | chr4_3:5813869-5813888 | Msa0626360:CDS | 55.0% | |
| GAACTAGCGTGCTTTGCTCC+AGG | + | chr4_3:5814570-5814589 | Msa0626360:CDS | 55.0% | |
| ! | GTCCCGTATTGAGTGCCACT+TGG | + | chr4_3:5815484-5815503 | Msa0626360:intron | 55.0% |
| TGGCAGAAAGGAAGGTCGGT+CGG | + | chr4_3:5815842-5815861 | Msa0626360:CDS | 55.0% | |
| CGGTGTGGACGTGTCAGTGT+TGG | + | chr4_3:5809955-5809974 | Msa0626360:intron | 60.0% | |
| CAGCTGGGTCGCAAACTCTC+TGG | + | chr4_3:5812425-5812444 | Msa0626360:intron | 60.0% | |
| CAGGGACGTGCACACAATCC+TGG | + | chr4_3:5812765-5812784 | Msa0626360:CDS | 60.0% | |
| ! | TGTTGCCGGTTAGGCGCCAA+AGG | - | chr4_3:5815310-5815329 | None:intergenic | 60.0% |
| GGCAGAAAGGAAGGTCGGTC+GGG | + | chr4_3:5815843-5815862 | Msa0626360:CDS | 60.0% | |
| AAGTGCACGGTGGCACTGCC+AGG | + | chr4_3:5811524-5811543 | Msa0626360:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 5809201 | 5816348 | 5809201 | ID=Msa0626360;Name=Msa0626360 |
| chr4_3 | mRNA | 5809201 | 5816348 | 5809201 | ID=Msa0626360-mRNA-1;Parent=Msa0626360;Name=Msa0626360-mRNA-1;_AED=0.09;_eAED=0.09;_QI=393|1|1|1|0.92|0.86|15|416|577 |
| chr4_3 | exon | 5809201 | 5809758 | 5809201 | ID=Msa0626360-mRNA-1:exon:1666;Parent=Msa0626360-mRNA-1 |
| chr4_3 | exon | 5811099 | 5811146 | 5811099 | ID=Msa0626360-mRNA-1:exon:1667;Parent=Msa0626360-mRNA-1 |
| chr4_3 | exon | 5811508 | 5811696 | 5811508 | ID=Msa0626360-mRNA-1:exon:1668;Parent=Msa0626360-mRNA-1 |
| chr4_3 | exon | 5811901 | 5812013 | 5811901 | ID=Msa0626360-mRNA-1:exon:1669;Parent=Msa0626360-mRNA-1 |
| chr4_3 | exon | 5812428 | 5812493 | 5812428 | ID=Msa0626360-mRNA-1:exon:1670;Parent=Msa0626360-mRNA-1 |
| chr4_3 | exon | 5812626 | 5812797 | 5812626 | ID=Msa0626360-mRNA-1:exon:1671;Parent=Msa0626360-mRNA-1 |
| chr4_3 | exon | 5813575 | 5813664 | 5813575 | ID=Msa0626360-mRNA-1:exon:1672;Parent=Msa0626360-mRNA-1 |
| chr4_3 | exon | 5813766 | 5813890 | 5813766 | ID=Msa0626360-mRNA-1:exon:1673;Parent=Msa0626360-mRNA-1 |
| chr4_3 | exon | 5814039 | 5814104 | 5814039 | ID=Msa0626360-mRNA-1:exon:1674;Parent=Msa0626360-mRNA-1 |
| chr4_3 | exon | 5814355 | 5814463 | 5814355 | ID=Msa0626360-mRNA-1:exon:1675;Parent=Msa0626360-mRNA-1 |
| chr4_3 | exon | 5814564 | 5814662 | 5814564 | ID=Msa0626360-mRNA-1:exon:1676;Parent=Msa0626360-mRNA-1 |
| chr4_3 | exon | 5815091 | 5815171 | 5815091 | ID=Msa0626360-mRNA-1:exon:1677;Parent=Msa0626360-mRNA-1 |
| chr4_3 | exon | 5815245 | 5815415 | 5815245 | ID=Msa0626360-mRNA-1:exon:1678;Parent=Msa0626360-mRNA-1 |
| chr4_3 | exon | 5815630 | 5816072 | 5815630 | ID=Msa0626360-mRNA-1:exon:1679;Parent=Msa0626360-mRNA-1 |
| chr4_3 | exon | 5816136 | 5816348 | 5816136 | ID=Msa0626360-mRNA-1:exon:1680;Parent=Msa0626360-mRNA-1 |
| chr4_3 | five_prime_UTR | 5809201 | 5809593 | 5809201 | ID=Msa0626360-mRNA-1:five_prime_utr;Parent=Msa0626360-mRNA-1 |
| chr4_3 | CDS | 5809594 | 5809758 | 5809594 | ID=Msa0626360-mRNA-1:cds;Parent=Msa0626360-mRNA-1 |
| chr4_3 | CDS | 5811099 | 5811146 | 5811099 | ID=Msa0626360-mRNA-1:cds;Parent=Msa0626360-mRNA-1 |
| chr4_3 | CDS | 5811508 | 5811696 | 5811508 | ID=Msa0626360-mRNA-1:cds;Parent=Msa0626360-mRNA-1 |
| chr4_3 | CDS | 5811901 | 5812013 | 5811901 | ID=Msa0626360-mRNA-1:cds;Parent=Msa0626360-mRNA-1 |
| chr4_3 | CDS | 5812428 | 5812493 | 5812428 | ID=Msa0626360-mRNA-1:cds;Parent=Msa0626360-mRNA-1 |
| chr4_3 | CDS | 5812626 | 5812797 | 5812626 | ID=Msa0626360-mRNA-1:cds;Parent=Msa0626360-mRNA-1 |
| chr4_3 | CDS | 5813575 | 5813664 | 5813575 | ID=Msa0626360-mRNA-1:cds;Parent=Msa0626360-mRNA-1 |
| chr4_3 | CDS | 5813766 | 5813890 | 5813766 | ID=Msa0626360-mRNA-1:cds;Parent=Msa0626360-mRNA-1 |
| chr4_3 | CDS | 5814039 | 5814104 | 5814039 | ID=Msa0626360-mRNA-1:cds;Parent=Msa0626360-mRNA-1 |
| chr4_3 | CDS | 5814355 | 5814463 | 5814355 | ID=Msa0626360-mRNA-1:cds;Parent=Msa0626360-mRNA-1 |
| chr4_3 | CDS | 5814564 | 5814662 | 5814564 | ID=Msa0626360-mRNA-1:cds;Parent=Msa0626360-mRNA-1 |
| chr4_3 | CDS | 5815091 | 5815171 | 5815091 | ID=Msa0626360-mRNA-1:cds;Parent=Msa0626360-mRNA-1 |
| chr4_3 | CDS | 5815245 | 5815415 | 5815245 | ID=Msa0626360-mRNA-1:cds;Parent=Msa0626360-mRNA-1 |
| chr4_3 | CDS | 5815630 | 5815869 | 5815630 | ID=Msa0626360-mRNA-1:cds;Parent=Msa0626360-mRNA-1 |
| chr4_3 | three_prime_UTR | 5815870 | 5816072 | 5815870 | ID=Msa0626360-mRNA-1:three_prime_utr;Parent=Msa0626360-mRNA-1 |
| chr4_3 | three_prime_UTR | 5816136 | 5816348 | 5816136 | ID=Msa0626360-mRNA-1:three_prime_utr;Parent=Msa0626360-mRNA-1 |
| Gene Sequence |
| Protein sequence |
