AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0733250

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0733250 MtrunA17_Chr5g0428461 82.239 1036 94 7 1 1035 1 947 0.0 1658
Msa0733250 MtrunA17_Chr3g0128631 37.640 890 397 32 201 1028 76 869 7.15e-130 416
Msa0733250 MtrunA17_Chr3g0128631 51.546 97 45 2 1 97 1 95 2.17e-17 87.8
Msa0733250 MtrunA17_Chr7g0268371 35.252 139 63 5 607 736 6 126 2.96e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0733250 AT5G05190.1 44.248 113 53 2 791 893 433 545 3.10e-21 100
Msa0733250 AT3G56410.3 30.175 285 177 10 631 900 22 299 2.36e-15 82.0
Msa0733250 AT3G56410.2 30.175 285 177 10 631 900 158 435 2.45e-15 82.0
Msa0733250 AT3G56410.1 30.175 285 177 10 631 900 111 388 2.49e-15 82.0

Find 252 sgRNAs with CRISPR-Local

Find 327 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCCATAGATTTGACGATTTA+AGG 0.115916 5_1:-46489182 Msa0733250:CDS
AATGCATCGAATCTTGTTTC+TGG 0.229203 5_1:-46490401 Msa0733250:CDS
CAGATCTTACATGTTAATTA+AGG 0.237828 5_1:-46491825 Msa0733250:intron
GGCTTTGGTATGAAGAAATA+TGG 0.240136 5_1:+46488575 None:intergenic
CAATTTCATTCACAATCTTC+TGG 0.248755 5_1:+46491194 None:intergenic
GAGAACTTTGCGTCTGAAAA+AGG 0.266410 5_1:-46489282 Msa0733250:CDS
ATGCAAAACAAGCCGATAAA+TGG 0.275138 5_1:-46487869 Msa0733250:CDS
TGAAGCAGCAGCCTACATTT+AGG 0.279383 5_1:+46491068 None:intergenic
CAGAAGATTGTGAATGAAAT+TGG 0.290102 5_1:-46491193 Msa0733250:five_prime_UTR
AGTTTCATCTTCTCCTGGTC+AGG 0.305594 5_1:+46488685 None:intergenic
AGCTCAGCAACAGTTGTTAA+TGG 0.316955 5_1:-46489411 Msa0733250:CDS
TGATTTCCAGTTCTTTCTAA+TGG 0.319454 5_1:+46489648 None:intergenic
AGAGAAAACAGTTGCTTATC+AGG 0.319498 5_1:-46490111 Msa0733250:CDS
ACCTTAAATCGTCAAATCTA+TGG 0.331232 5_1:+46489181 None:intergenic
CTTGTTGGCTCGGTTGAATA+AGG 0.332112 5_1:+46488391 None:intergenic
GGAAGGGTTCAAATTGAAAA+TGG 0.332410 5_1:-46489903 Msa0733250:CDS
TAGATATCCACCTCATCTTC+TGG 0.336612 5_1:+46489831 None:intergenic
TGAGGACAACAATTGAAATA+AGG 0.342415 5_1:+46488346 None:intergenic
GGAAGGAATCAAATTGAAAA+TGG 0.344442 5_1:-46490269 Msa0733250:CDS
GCAGAGTCGAAAGAATTAAA+TGG 0.346138 5_1:-46489378 Msa0733250:CDS
TGAAATAAGGATGATCAATA+TGG 0.352063 5_1:+46488359 None:intergenic
GAGAATGGTTTATAAATTGC+AGG 0.354092 5_1:-46488659 Msa0733250:CDS
AATCTGAGTTTGGAGATTAA+TGG 0.354881 5_1:-46489126 Msa0733250:CDS
TTGAAAATGGTGAATGCAAC+GGG 0.355979 5_1:-46490256 Msa0733250:CDS
ATGTGTCAATAATGACAAAT+TGG 0.358106 5_1:-46489448 Msa0733250:CDS
AATGTATCAAAATGAGGTTC+TGG 0.360547 5_1:-46488893 Msa0733250:CDS
GTTATAGCATCAACAGTATC+AGG 0.363053 5_1:+46487686 None:intergenic
TGAGTATTGATGCCATTTAT+CGG 0.363212 5_1:+46487857 None:intergenic
TAAAGTCAAACTCTTGTTAC+GGG 0.371549 5_1:-46487382 Msa0733250:intron
CAATAATGACAAATTGGTTC+TGG 0.377453 5_1:-46489442 Msa0733250:CDS
CAGAAGTTAGTTTCCAGATC+TGG 0.379683 5_1:-46489483 Msa0733250:CDS
GTGTCATATTCCGATGATTA+TGG 0.383602 5_1:-46487809 Msa0733250:CDS
TCTTTCGACTCTGCATTATC+TGG 0.385385 5_1:+46489387 None:intergenic
TTCTTCAATTTAGTAACTAA+TGG 0.393612 5_1:+46491132 None:intergenic
GATGGTGGTCCAACAGCATT+TGG 0.393896 5_1:+46487905 None:intergenic
GAAACAAACGAAAGACTCTC+TGG 0.394741 5_1:-46488604 Msa0733250:CDS
TTCATTCACAATCTTCTGGC+TGG 0.396912 5_1:+46491198 None:intergenic
GTTTGACTAAGCGACATTAC+CGG 0.399947 5_1:-46488099 Msa0733250:CDS
TGATGAAGTGCTGAAGGTTT+TGG 0.401181 5_1:+46487575 None:intergenic
TGCATATCAAGGTCACTTGA+TGG 0.401538 5_1:+46487887 None:intergenic
TTCTTCAGAAGAATGTTCAT+TGG 0.403403 5_1:-46489937 Msa0733250:CDS
ACATAATACAAATCGAGGTT+TGG 0.405068 5_1:+46491091 None:intergenic
GCGAAAAGTTATGCCGCCTT+TGG 0.405729 5_1:+46488419 None:intergenic
CATAATACAAATCGAGGTTT+GGG 0.408425 5_1:+46491092 None:intergenic
ATAAAGTCAAACTCTTGTTA+CGG 0.409528 5_1:-46487383 Msa0733250:intron
TGGAGATTAATGGTGCGCTT+GGG 0.411772 5_1:-46489116 Msa0733250:CDS
CCATTCTCCGGAGTAGTAAC+CGG 0.413427 5_1:+46490227 None:intergenic
GAGTTCATTGTGTATTTGAT+TGG 0.415513 5_1:+46488750 None:intergenic
AATCTTGTGAACAGAGATAC+AGG 0.417113 5_1:-46488162 Msa0733250:CDS
TCTCGTCATGAACTTATAGA+AGG 0.417202 5_1:-46489243 Msa0733250:CDS
TGCATCAGTCTCGTTTGAAC+TGG 0.422112 5_1:+46490436 None:intergenic
ATATGGTGTGCATTGCTTGT+TGG 0.422199 5_1:+46488376 None:intergenic
AACGGTGCTGCACCTGCTAC+TGG 0.424258 5_1:+46488076 None:intergenic
TGTTTCCTTGTTTGCATGGT+TGG 0.426048 5_1:+46488621 None:intergenic
ATCATGGTTTGGATTACCCT+AGG 0.426116 5_1:-46488528 Msa0733250:CDS
TCATTCTCCTGAGAAATAAC+TGG 0.428309 5_1:+46489981 None:intergenic
CAAAGAACAGAAGAGGATAT+TGG 0.428506 5_1:-46489339 Msa0733250:CDS
TCAGGGTCCTCGACGGAGTC+AGG 0.431948 5_1:+46488703 None:intergenic
TTGTATTATGTCCTAAATGT+AGG 0.436732 5_1:-46491079 Msa0733250:CDS
TGAAACGGTGCAACAGAAAC+AGG 0.439658 5_1:+46487749 None:intergenic
GAAGATGAAACTGTTGAGAA+TGG 0.440058 5_1:-46488674 Msa0733250:CDS
CTTCGTGTGAATCATGGCTT+TGG 0.440152 5_1:+46488560 None:intergenic
TCTTATACTCCAAATGCTGT+TGG 0.441668 5_1:-46487914 Msa0733250:CDS
TCCTCAAGAGGGGCAACACT+TGG 0.442306 5_1:-46488329 Msa0733250:CDS
AATGAGATTTCTAACCTTGA+AGG 0.442316 5_1:+46490997 None:intergenic
AGAAGTAAATAATCTGAGTT+TGG 0.444005 5_1:-46489136 Msa0733250:CDS
GTGTGCATTGCTTGTTGGCT+CGG 0.446438 5_1:+46488381 None:intergenic
CAGATCTGGAAACTAACTTC+TGG 0.448236 5_1:+46489484 None:intergenic
ATTAACCATTGCGGACTTGA+AGG 0.456169 5_1:+46488217 None:intergenic
TGAAAGGGGTCAAATTGAAA+AGG 0.458763 5_1:-46490024 Msa0733250:CDS
TCCATCCAACGAACATTCTC+CGG 0.459642 5_1:+46490052 None:intergenic
GATGAGAATTCAGCTCTAGT+AGG 0.460755 5_1:-46489591 Msa0733250:CDS
GAATTTCTCTCACCTGCTGC+AGG 0.461595 5_1:-46491880 Msa0733250:five_prime_UTR
CTCTCCTTCTGATGACATAT+TGG 0.462428 5_1:+46487613 None:intergenic
TCAACAGTTTCATCTTCTCC+TGG 0.466005 5_1:+46488680 None:intergenic
CTCATTTGAGTAACCTCTGT+TGG 0.466232 5_1:+46489776 None:intergenic
GAAGAAGAAGAGCAAAGTAA+TGG 0.469438 5_1:-46489678 Msa0733250:CDS
GTCAGAGGAAAATATTGAAA+GGG 0.469698 5_1:-46490162 Msa0733250:CDS
GATAAGCAACGACTATGAAC+TGG 0.470290 5_1:+46488253 None:intergenic
GGATGTGGCACGACCCTTCA+AGG 0.471846 5_1:-46491011 Msa0733250:intron
TGTTCATTGGATAGAAATAG+TGG 0.472470 5_1:-46489924 Msa0733250:CDS
CGTTTGTTTCCTTGTTTGCA+TGG 0.474397 5_1:+46488617 None:intergenic
ACAGTATCAGGAGAGACAAT+TGG 0.475358 5_1:+46487698 None:intergenic
ATACATATAGAAGAAGATAG+TGG 0.476983 5_1:-46492118 Msa0733250:five_prime_UTR
ATGAGAATTCAGCTCTAGTA+GGG 0.477698 5_1:-46489590 Msa0733250:CDS
ATCACTTCTGCTGAGGCCTG+TGG 0.478829 5_1:+46489750 None:intergenic
GCATGAGAACTTCTAGCTGT+TGG 0.481436 5_1:+46489078 None:intergenic
TTCTCAGGAGAATGATTTGA+AGG 0.482418 5_1:-46489973 Msa0733250:CDS
TCATGGTTTGGATTACCCTA+GGG 0.483040 5_1:-46488527 Msa0733250:CDS
TTGGAGATTAATGGTGCGCT+TGG 0.483303 5_1:-46489117 Msa0733250:CDS
TTGTCCATCTGATCCAGATC+TGG 0.484975 5_1:+46489470 None:intergenic
AGAGCAACCAGTTATTTCTC+AGG 0.485532 5_1:-46489988 Msa0733250:CDS
GCTGAAAATCAAGTTGAAGC+TGG 0.486368 5_1:-46487332 Msa0733250:CDS
TCATTGTGTATTTGATTGGA+TGG 0.486375 5_1:+46488754 None:intergenic
CAGCTCTGTTGGAAGTCCAC+GGG 0.488135 5_1:+46487351 None:intergenic
ATCTCCCTTCGTGTGAATCA+TGG 0.488389 5_1:+46488554 None:intergenic
TCACTTCTGCTGAGGCCTGT+GGG 0.488855 5_1:+46489751 None:intergenic
TCAGCTCTGTTGGAAGTCCA+CGG 0.490610 5_1:+46487350 None:intergenic
CGACATTACCGGCCAGTAGC+AGG 0.492216 5_1:-46488088 Msa0733250:CDS
ATAAACTCAAATCATGTTCA+CGG 0.494108 5_1:-46488196 Msa0733250:CDS
TTGAAGAATGTCTAGTGAAA+CGG 0.494662 5_1:-46491117 Msa0733250:exon
TTCAGCACTTCATCAACTGA+TGG 0.495956 5_1:-46487567 Msa0733250:CDS
AAGAGGACCTAGCACGAGTA+AGG 0.496884 5_1:-46487642 Msa0733250:CDS
TCTTCTTCAGAGGGGAATGA+AGG 0.498454 5_1:-46490290 Msa0733250:CDS
TCCGGAGAATGTTCGTTGGA+TGG 0.500215 5_1:-46490053 Msa0733250:CDS
AACATGCCATTAGAAAGAAC+TGG 0.505048 5_1:-46489654 Msa0733250:CDS
CCCAAGTGTTGCCCCTCTTG+AGG 0.505193 5_1:+46488328 None:intergenic
TTTGAGGGAGGCTCCAGAAA+GGG 0.507697 5_1:-46488988 Msa0733250:CDS
TGCAAGCTATAGTCATGGCT+TGG 0.509462 5_1:-46488494 Msa0733250:CDS
GTCATGGCTTGGATTACCCT+AGG 0.511098 5_1:-46488483 Msa0733250:CDS
CAGAACCAACCATGCAAACA+AGG 0.514406 5_1:-46488626 Msa0733250:CDS
TACAAATCTTCACGCTGGTA+AGG 0.515147 5_1:+46488286 None:intergenic
GTTTCATCTTCTCCTGGTCA+GGG 0.516332 5_1:+46488686 None:intergenic
AAAGAGGTGATCATGCAAAT+CGG 0.517062 5_1:-46488864 Msa0733250:CDS
TGAATGCAACGGGGAGCAGC+CGG 0.517873 5_1:-46490246 Msa0733250:CDS
GTTTCCAGATCTGGATCAGA+TGG 0.518817 5_1:-46489474 Msa0733250:CDS
TTATGCAGGCAGTGAAAGCT+AGG 0.519334 5_1:-46491244 Msa0733250:intron
ACTAATGGCAGTACAAAGAC+TGG 0.520826 5_1:+46491147 None:intergenic
GAAAGGGGTCAAATTGAAAA+CGG 0.523014 5_1:-46490146 Msa0733250:CDS
CGTCAGAGGAAAATATTGAA+AGG 0.524419 5_1:-46490163 Msa0733250:CDS
TCTATAGACTCTTCTTCAGA+GGG 0.526685 5_1:-46490299 Msa0733250:CDS
TCTCCAAGTCAAGTGCTAAG+AGG 0.527571 5_1:-46487536 Msa0733250:CDS
GATGAACTATACTAGAACTA+GGG 0.529421 5_1:-46488131 Msa0733250:CDS
CCCCACTCTGGCTATGAAAG+TGG 0.529541 5_1:-46488781 Msa0733250:CDS
CCGGTTACTACTCCGGAGAA+TGG 0.530350 5_1:-46490227 Msa0733250:CDS
GTTGGATGGAAATTGTGAAA+GGG 0.532636 5_1:-46490039 Msa0733250:CDS
CTCCGTCGAGGACCCTGACC+AGG 0.534628 5_1:-46488698 Msa0733250:CDS
TTCAATTGTTGTCCTCAAGA+GGG 0.535041 5_1:-46488340 Msa0733250:CDS
GTCTATAGACTCTTCTTCAG+AGG 0.535422 5_1:-46490300 Msa0733250:CDS
CCTTCTGATGACATATTGGA+TGG 0.535543 5_1:+46487617 None:intergenic
TTCCTCCGGAGAATGTTCGT+TGG 0.536741 5_1:-46490057 Msa0733250:CDS
CTGAAAATCAAGTTGAAGCT+GGG 0.539825 5_1:-46487331 Msa0733250:CDS
AAACAAACGAAAGACTCTCT+GGG 0.541337 5_1:-46488603 Msa0733250:CDS
TGTCTCTTCTAACGATGGAA+TGG 0.544336 5_1:-46489043 Msa0733250:CDS
AGAGAAAATGAACCTGCAGC+AGG 0.545523 5_1:+46491868 None:intergenic
GTCTGCCATCACTTCTGCTG+AGG 0.548575 5_1:+46489743 None:intergenic
CTCGCATGCGAGTGGTGAAA+CGG 0.549200 5_1:+46487734 None:intergenic
AGATGAACTATACTAGAACT+AGG 0.550780 5_1:-46488132 Msa0733250:CDS
AAATCAGTTAATTAGTGCAC+TGG 0.550802 5_1:-46489631 Msa0733250:CDS
GTGCTGCACCTGCTACTGGC+CGG 0.551700 5_1:+46488080 None:intergenic
GGAGATTAATGGTGCGCTTG+GGG 0.551827 5_1:-46489115 Msa0733250:CDS
GTCATTACAAAGAACAGAAG+AGG 0.552205 5_1:-46489346 Msa0733250:CDS
CTCCTGGTCAGGGTCCTCGA+CGG 0.552208 5_1:+46488696 None:intergenic
ATCAGTTGATGAAGTGCTGA+AGG 0.552328 5_1:+46487569 None:intergenic
GGAATGGATGAGCGGTTCCT+CGG 0.555207 5_1:-46489027 Msa0733250:CDS
AAAAGAACTAGTTCTTCCTC+CGG 0.555685 5_1:-46490071 Msa0733250:CDS
CAATAGAATGTATCAAAATG+AGG 0.555788 5_1:-46488899 Msa0733250:CDS
TTTCAATTGTTGTCCTCAAG+AGG 0.556608 5_1:-46488341 Msa0733250:CDS
AGAAGTTCTCATGCTTATGA+TGG 0.557014 5_1:-46489069 Msa0733250:CDS
ATGAGATTTCTAACCTTGAA+GGG 0.557765 5_1:+46490998 None:intergenic
CATTGGATAGAAATAGTGGA+AGG 0.557928 5_1:-46489920 Msa0733250:CDS
AGTAAAAGCTATTCCTCAGA+AGG 0.559870 5_1:-46487776 Msa0733250:CDS
TCCACTTTCATAGCCAGAGT+GGG 0.560438 5_1:+46488780 None:intergenic
AGAGGTGCTCCAGTCGATGA+AGG 0.562721 5_1:-46487518 Msa0733250:CDS
GAAAGGGGTCAAATTGAAAA+GGG 0.563313 5_1:-46490023 Msa0733250:CDS
GGCTTGGATTACCCTAGGGG+GGG 0.564480 5_1:-46488478 Msa0733250:CDS
CTTATCCTTCAAGTCCGCAA+TGG 0.566367 5_1:-46488222 Msa0733250:CDS
CGTTGGATGGAAATTGTGAA+AGG 0.568820 5_1:-46490040 Msa0733250:CDS
TTGAAAAGGAGAAAATCTGC+GGG 0.570920 5_1:+46488016 None:intergenic
GAAATGCATGTACGGACGAA+AGG 0.571355 5_1:-46489314 Msa0733250:CDS
ACAGGCCTCAGCAGAAGTGA+TGG 0.571616 5_1:-46489748 Msa0733250:CDS
GAAGCTGGGAATGTCAAGAA+AGG 0.571629 5_1:-46487317 Msa0733250:CDS
ATTGAAAATGGTGAATGCAA+CGG 0.572237 5_1:-46490257 Msa0733250:CDS
TCCAGTCGATGAAGGAAAAG+AGG 0.575154 5_1:-46487510 Msa0733250:intron
GCACCTCTTAGCACTTGACT+TGG 0.575905 5_1:+46487533 None:intergenic
GTGTACAAGTGTGGTGGATG+TGG 0.579234 5_1:-46491026 Msa0733250:CDS
ACATGTAAGATCTGATGAGA+AGG 0.582630 5_1:+46491834 None:intergenic
TTACTCAAATGAGCTCCCAC+AGG 0.584198 5_1:-46489766 Msa0733250:CDS
GGAGGCTCCAGAAAGGGAAA+AGG 0.584555 5_1:-46488982 Msa0733250:CDS
CCTCAAGAGGGGCAACACTT+GGG 0.584884 5_1:-46488328 Msa0733250:CDS
CATTTATGACAAGTAACAAA+CGG 0.586141 5_1:+46488058 None:intergenic
GGAGCAGCCGGTTACTACTC+CGG 0.586526 5_1:-46490234 Msa0733250:CDS
ACCAGCGTGAAGATTTGTAT+CGG 0.589055 5_1:-46488282 Msa0733250:CDS
AGAACAGAAGAGGATATTGG+TGG 0.589857 5_1:-46489336 Msa0733250:CDS
TGAAGAACCAGAAGATGAGG+TGG 0.590379 5_1:-46489838 Msa0733250:CDS
TTGGATGGAAATTGTGAAAG+GGG 0.591244 5_1:-46490038 Msa0733250:CDS
TGGCTTGGATTACCCTAGGG+GGG 0.593211 5_1:-46488479 Msa0733250:CDS
CTCTGACGAACATTCTCCCG+AGG 0.593372 5_1:+46490178 None:intergenic
TATTGGTGGAAATGCATGTA+CGG 0.595597 5_1:-46489322 Msa0733250:CDS
TTAGGACATAATACAAATCG+AGG 0.595754 5_1:+46491086 None:intergenic
GAGGTTCTGGAGACTAAAAG+AGG 0.595880 5_1:-46488880 Msa0733250:CDS
TTTGACGATTTAAGGTCAGC+GGG 0.597280 5_1:-46489174 Msa0733250:CDS
CCATACAAAATGCCTCTCCA+TGG 0.597821 5_1:-46488811 Msa0733250:CDS
CTTCAGAGGGGAATGAAGGA+AGG 0.597870 5_1:-46490286 Msa0733250:CDS
TTTGAAAAGGAGAAAATCTG+CGG 0.598989 5_1:+46488015 None:intergenic
TCAATTGTTGTCCTCAAGAG+GGG 0.599308 5_1:-46488339 Msa0733250:CDS
ATAAGTTATCAGATATCAGA+AGG 0.599784 5_1:-46489809 Msa0733250:CDS
GATGGAGCCTTACTCGTGCT+AGG 0.601168 5_1:+46487635 None:intergenic
TCAGCACTTCATCAACTGAT+GGG 0.602102 5_1:-46487566 Msa0733250:CDS
AAGGAGAAAACTGCTTCAAG+AGG 0.602611 5_1:-46487659 Msa0733250:CDS
AGATGAAGAACCAGAAGATG+AGG 0.603344 5_1:-46489841 Msa0733250:CDS
ATGGCATCAACATGCACCAA+AGG 0.605334 5_1:-46488435 Msa0733250:CDS
CAACGACTATGAACTGGATG+AGG 0.605360 5_1:+46488259 None:intergenic
GGCAGTGTCTCTTCTAACGA+TGG 0.605761 5_1:-46489048 Msa0733250:CDS
TCATGGCTTGGATTACCCTA+GGG 0.606002 5_1:-46488482 Msa0733250:CDS
CCATCCAATATGTCATCAGA+AGG 0.606112 5_1:-46487617 Msa0733250:CDS
TGTTGATGCTATAACAGAGA+AGG 0.609901 5_1:-46487678 Msa0733250:CDS
CAGAGTGGGGACTACTTCCA+TGG 0.609908 5_1:+46488794 None:intergenic
TCTTAGCACTTGACTTGGAG+AGG 0.610626 5_1:+46487538 None:intergenic
ATTTGACGATTTAAGGTCAG+CGG 0.611868 5_1:-46489175 Msa0733250:CDS
GACAGAATGACCATAATCAT+CGG 0.612967 5_1:+46487799 None:intergenic
AGTTCTAGTATAGTTCATCT+CGG 0.613541 5_1:+46488135 None:intergenic
CATGGAAGTAGTCCCCACTC+TGG 0.614844 5_1:-46488793 Msa0733250:CDS
GGTGAGAGAAATTCATGTGG+TGG 0.615625 5_1:+46491889 None:intergenic
CAATATGTCATCAGAAGGAG+AGG 0.617021 5_1:-46487612 Msa0733250:CDS
GACACGCGATCCGCAACATG+AGG 0.617239 5_1:+46487827 None:intergenic
GAAAATGCAAGCTATAGTCA+TGG 0.617330 5_1:-46488454 Msa0733250:CDS
TAATGTCGCTTAGTCAAACT+CGG 0.621538 5_1:+46488103 None:intergenic
TTTGAGTTTATTAACCATTG+CGG 0.621841 5_1:+46488208 None:intergenic
GTGAAGTCTGAAGTAGACTT+CGG 0.622508 5_1:-46489567 Msa0733250:CDS
AGAAACAGGATCTCCTTCTG+AGG 0.623951 5_1:+46487763 None:intergenic
GCAAATGCAAGCTATAGTCA+TGG 0.634261 5_1:-46488499 Msa0733250:CDS
CTCGGGAGAATGTTCGTCAG+AGG 0.634644 5_1:-46490177 Msa0733250:CDS
GCATCAACATGCACCAAAGG+CGG 0.635268 5_1:-46488432 Msa0733250:CDS
CAAATGTGGTGCATGTCAAG+AGG 0.636974 5_1:-46487975 Msa0733250:CDS
TCAGAGGAAAATATTGAAAG+GGG 0.637230 5_1:-46490161 Msa0733250:CDS
AACAAACGAAAGACTCTCTG+GGG 0.642281 5_1:-46488602 Msa0733250:CDS
AATGACAAATTGGTTCTGGT+AGG 0.643883 5_1:-46489438 Msa0733250:CDS
ATTGGATAGAAATAGTGGAA+GGG 0.646256 5_1:-46489919 Msa0733250:CDS
CAAAGCCATGATTCACACGA+AGG 0.648456 5_1:-46488559 Msa0733250:CDS
GTATGTCATAAGCTCAAATG+TGG 0.652362 5_1:-46487989 Msa0733250:CDS
GCCGATACAAATCTTCACGC+TGG 0.654242 5_1:+46488281 None:intergenic
GTGAAACATAGCTTGAACTG+AGG 0.654270 5_1:+46488725 None:intergenic
GGTGATAAACAATACAGCAA+CGG 0.654283 5_1:-46490380 Msa0733250:CDS
ATGGCTTGGATTACCCTAGG+GGG 0.655359 5_1:-46488480 Msa0733250:CDS
AAAGCCATGATTCACACGAA+GGG 0.661229 5_1:-46488558 Msa0733250:CDS
TGGTTTGGATTACCCTAGGG+GGG 0.668866 5_1:-46488524 Msa0733250:CDS
GTTACGGGGTTGATACCCCG+TGG 0.670022 5_1:-46487367 Msa0733250:CDS
AAAGTCAAACTCTTGTTACG+GGG 0.670197 5_1:-46487381 Msa0733250:intron
CATGGCTTGGATTACCCTAG+GGG 0.672837 5_1:-46488481 Msa0733250:CDS
ATATCAAGGTCACTTGATGG+TGG 0.675363 5_1:+46487890 None:intergenic
CATGGTTTGGATTACCCTAG+GGG 0.675826 5_1:-46488526 Msa0733250:CDS
CCACTTTCATAGCCAGAGTG+GGG 0.676139 5_1:+46488781 None:intergenic
TGTTTCACCTGACTCCGTCG+AGG 0.678243 5_1:-46488710 Msa0733250:CDS
TGGGGACTACTTCCATGGAG+AGG 0.678381 5_1:+46488799 None:intergenic
TTCCACTTTCATAGCCAGAG+TGG 0.681735 5_1:+46488779 None:intergenic
TGTGTGCACTCGCATGCGAG+TGG 0.685309 5_1:+46487726 None:intergenic
ATCCAACGAACATTCTCCGG+AGG 0.688099 5_1:+46490055 None:intergenic
TCACGCTGGTAAGGAAAACA+CGG 0.690605 5_1:+46488295 None:intergenic
TCAGTCTGAACCTCATGTTG+CGG 0.690793 5_1:-46487837 Msa0733250:CDS
TTTGACGTGTACAAGTGTGG+TGG 0.694172 5_1:-46491032 Msa0733250:CDS
AGCTCTGTTGGAAGTCCACG+GGG 0.694678 5_1:+46487352 None:intergenic
AGGCATACAGTGTCCAACAG+AGG 0.695650 5_1:-46489789 Msa0733250:CDS
ACAAACGAAAGACTCTCTGG+GGG 0.698803 5_1:-46488601 Msa0733250:CDS
CTAACGATGGAATGGATGAG+CGG 0.702875 5_1:-46489035 Msa0733250:CDS
CTATAGACTCTTCTTCAGAG+GGG 0.709100 5_1:-46490298 Msa0733250:CDS
ATGGTTTGGATTACCCTAGG+GGG 0.718274 5_1:-46488525 Msa0733250:CDS
TGAGAATTCAGCTCTAGTAG+GGG 0.729797 5_1:-46489589 Msa0733250:CDS
CGCTGGTAAGGAAAACACGG+AGG 0.737082 5_1:+46488298 None:intergenic
ATCTTGTGAACAGAGATACA+GGG 0.741534 5_1:-46488161 Msa0733250:CDS
TGAAAATGGTGAATGCAACG+GGG 0.753430 5_1:-46490255 Msa0733250:CDS
GCAGGTGAGAGAAATTCATG+TGG 0.782094 5_1:+46491886 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GAATTGTTTTTTTTTTTTTT+TGG - chr5_1:46487795-46487814 Msa0733250:CDS 10.0%
!! AAAAAAACAAAGAATTAAGA+AGG - chr5_1:46487499-46487518 Msa0733250:intron 15.0%
!!! TTGTTTTTTTTTTTTTTTGG+TGG - chr5_1:46487798-46487817 Msa0733250:CDS 15.0%
!!! TGTTTTTTTTTTTTTTTGGT+GGG - chr5_1:46487799-46487818 Msa0733250:CDS 15.0%
!! AAAATAAATTAAGTCTACAT+AGG + chr5_1:46487954-46487973 None:intergenic 15.0%
!!! TGAAATTTTAACTTATAATC+TGG + chr5_1:46488225-46488244 None:intergenic 15.0%
!!! TCAAAATTTATATTCTTTTG+AGG - chr5_1:46490493-46490512 Msa0733250:intron 15.0%
!!! CAAAATTTATATTCTTTTGA+GGG - chr5_1:46490494-46490513 Msa0733250:intron 15.0%
!!! TTTGTTTTTTTATGTGATGT+TGG + chr5_1:46487490-46487509 None:intergenic 20.0%
!!! TATGAGTTTTGATTTTTTCA+TGG - chr5_1:46487874-46487893 Msa0733250:CDS 20.0%
!! TCAAAACTTACTAAATATGA+AGG - chr5_1:46488086-46488105 Msa0733250:CDS 20.0%
!! TTCTTCAATTTAGTAACTAA+TGG + chr5_1:46488368-46488387 None:intergenic 20.0%
!! AGATTGTATAATATAGTAGT+TGG + chr5_1:46488697-46488716 None:intergenic 20.0%
!! AACACAAATATTGAAGTTTA+TGG + chr5_1:46488844-46488863 None:intergenic 20.0%
!!! AATATTTTGTTTTACAAACG+AGG - chr5_1:46488919-46488938 Msa0733250:CDS 20.0%
!!! AAATTTTAAGAGCTATAAAG+GGG + chr5_1:46488972-46488991 None:intergenic 20.0%
!!! CAAATTTTAAGAGCTATAAA+GGG + chr5_1:46488973-46488992 None:intergenic 20.0%
!!! TCAAATTTTAAGAGCTATAA+AGG + chr5_1:46488974-46488993 None:intergenic 20.0%
!!! TCATTTTGATACATTCTATT+GGG + chr5_1:46490599-46490618 None:intergenic 20.0%
!! AGGTCATGAAATATATATTT+GGG - chr5_1:46492007-46492026 Msa0733250:five_prime_UTR 20.0%
! ATACATATAGAAGAAGATAG+TGG - chr5_1:46487379-46487398 Msa0733250:CDS 25.0%
!!! TATTCATTTTTCTTCTTGTG+TGG - chr5_1:46487440-46487459 Msa0733250:intron 25.0%
!!! ATTCATTTTTCTTCTTGTGT+GGG - chr5_1:46487441-46487460 Msa0733250:intron 25.0%
! CAGATCTTACATGTTAATTA+AGG - chr5_1:46487672-46487691 Msa0733250:CDS 25.0%
!! TTCAACTCATATTTTCTTGA+TGG - chr5_1:46487850-46487869 Msa0733250:CDS 25.0%
!!! ATTTTTTCATGGTTTTGACT+TGG - chr5_1:46487885-46487904 Msa0733250:CDS 25.0%
!!! TTAGTAAGTTTTGACAAAGT+GGG + chr5_1:46488080-46488099 None:intergenic 25.0%
!!! TTTAGTAAGTTTTGACAAAG+TGG + chr5_1:46488081-46488100 None:intergenic 25.0%
! ATTTCAATCTTATCTTATGC+AGG - chr5_1:46488239-46488258 Msa0733250:CDS 25.0%
! TTGTATTATGTCCTAAATGT+AGG - chr5_1:46488418-46488437 Msa0733250:CDS 25.0%
! TTGTACTAAATCTAGTATTG+CGG + chr5_1:46488615-46488634 None:intergenic 25.0%
! TAACACAATAGGCAATAAAA+TGG + chr5_1:46488889-46488908 None:intergenic 25.0%
! TTCATAGAAGTTAACACAAT+AGG + chr5_1:46488900-46488919 None:intergenic 25.0%
! ATAAGTTATCAGATATCAGA+AGG - chr5_1:46489688-46489707 Msa0733250:CDS 25.0%
! ATGTGTCAATAATGACAAAT+TGG - chr5_1:46490049-46490068 Msa0733250:CDS 25.0%
!! AATCTATGGCGAATATTTTT+GGG + chr5_1:46490305-46490324 None:intergenic 25.0%
!! AAATCTATGGCGAATATTTT+TGG + chr5_1:46490306-46490325 None:intergenic 25.0%
! AGAAGTAAATAATCTGAGTT+TGG - chr5_1:46490361-46490380 Msa0733250:CDS 25.0%
!!! AAGAATATAAATTTTGACCG+AGG + chr5_1:46490490-46490509 None:intergenic 25.0%
!!! AATTTATATTCTTTTGAGGG+AGG - chr5_1:46490497-46490516 Msa0733250:intron 25.0%
!!! CTCATTTTGATACATTCTAT+TGG + chr5_1:46490600-46490619 None:intergenic 25.0%
! CAATAGAATGTATCAAAATG+AGG - chr5_1:46490598-46490617 Msa0733250:intron 25.0%
! TGAAATAAGGATGATCAATA+TGG + chr5_1:46491141-46491160 None:intergenic 25.0%
!! TTTGAGTTTATTAACCATTG+CGG + chr5_1:46491292-46491311 None:intergenic 25.0%
! ATAAACTCAAATCATGTTCA+CGG - chr5_1:46491301-46491320 Msa0733250:intron 25.0%
! CATTTATGACAAGTAACAAA+CGG + chr5_1:46491442-46491461 None:intergenic 25.0%
!!! TATGACATACTCTTTTGAAA+AGG + chr5_1:46491498-46491517 None:intergenic 25.0%
! GAGGTCATGAAATATATATT+TGG - chr5_1:46492006-46492025 Msa0733250:five_prime_UTR 25.0%
! GGTCATGAAATATATATTTG+GGG - chr5_1:46492008-46492027 Msa0733250:five_prime_UTR 25.0%
! ATAAAGTCAAACTCTTGTTA+CGG - chr5_1:46492114-46492133 Msa0733250:five_prime_UTR 25.0%
TGCAGATAAAGAAGAAAAAG+TGG + chr5_1:46487307-46487326 None:intergenic 30.0%
CAATTTCATTCACAATCTTC+TGG + chr5_1:46488306-46488325 None:intergenic 30.0%
CAGAAGATTGTGAATGAAAT+TGG - chr5_1:46488304-46488323 Msa0733250:CDS 30.0%
TTGAAGAATGTCTAGTGAAA+CGG - chr5_1:46488380-46488399 Msa0733250:CDS 30.0%
CATAATACAAATCGAGGTTT+GGG + chr5_1:46488408-46488427 None:intergenic 30.0%
ACATAATACAAATCGAGGTT+TGG + chr5_1:46488409-46488428 None:intergenic 30.0%
TTAGGACATAATACAAATCG+AGG + chr5_1:46488414-46488433 None:intergenic 30.0%
! TTGTACACGTCAAAATTTTG+AGG + chr5_1:46488459-46488478 None:intergenic 30.0%
ATGAGATTTCTAACCTTGAA+GGG + chr5_1:46488502-46488521 None:intergenic 30.0%
AATGAGATTTCTAACCTTGA+AGG + chr5_1:46488503-46488522 None:intergenic 30.0%
! TCTCTTGAAACATTCTTTTG+AGG + chr5_1:46489159-46489178 None:intergenic 30.0%
GGAAGGAATCAAATTGAAAA+TGG - chr5_1:46489228-46489247 Msa0733250:CDS 30.0%
ATTGAAAATGGTGAATGCAA+CGG - chr5_1:46489240-46489259 Msa0733250:CDS 30.0%
!!! AAAAACTGCTTTTTCTTCCT+CGG - chr5_1:46489302-46489321 Msa0733250:CDS 30.0%
GTCAGAGGAAAATATTGAAA+GGG - chr5_1:46489335-46489354 Msa0733250:CDS 30.0%
TCAGAGGAAAATATTGAAAG+GGG - chr5_1:46489336-46489355 Msa0733250:CDS 30.0%
TTCTTCAGAAGAATGTTCAT+TGG - chr5_1:46489560-46489579 Msa0733250:CDS 30.0%
TGTTCATTGGATAGAAATAG+TGG - chr5_1:46489573-46489592 Msa0733250:CDS 30.0%
! ATTGGATAGAAATAGTGGAA+GGG - chr5_1:46489578-46489597 Msa0733250:CDS 30.0%
TGATTTCCAGTTCTTTCTAA+TGG + chr5_1:46489852-46489871 None:intergenic 30.0%
AAATCAGTTAATTAGTGCAC+TGG - chr5_1:46489866-46489885 Msa0733250:CDS 30.0%
! CAATAATGACAAATTGGTTC+TGG - chr5_1:46490055-46490074 Msa0733250:CDS 30.0%
ACCTTAAATCGTCAAATCTA+TGG + chr5_1:46490319-46490338 None:intergenic 30.0%
AATCTGAGTTTGGAGATTAA+TGG - chr5_1:46490371-46490390 Msa0733250:CDS 30.0%
AATGTATCAAAATGAGGTTC+TGG - chr5_1:46490604-46490623 Msa0733250:intron 30.0%
TCATTGTGTATTTGATTGGA+TGG + chr5_1:46490746-46490765 None:intergenic 30.0%
GAGTTCATTGTGTATTTGAT+TGG + chr5_1:46490750-46490769 None:intergenic 30.0%
GAGAATGGTTTATAAATTGC+AGG - chr5_1:46490838-46490857 Msa0733250:intron 30.0%
TGAGGACAACAATTGAAATA+AGG + chr5_1:46491154-46491173 None:intergenic 30.0%
!! GTTCACAAGATTTTGTTTCA+CGG + chr5_1:46491327-46491346 None:intergenic 30.0%
! AGTTCTAGTATAGTTCATCT+CGG + chr5_1:46491365-46491384 None:intergenic 30.0%
AGATGAACTATACTAGAACT+AGG - chr5_1:46491365-46491384 Msa0733250:intron 30.0%
GATGAACTATACTAGAACTA+GGG - chr5_1:46491366-46491385 Msa0733250:intron 30.0%
TTTGAAAAGGAGAAAATCTG+CGG + chr5_1:46491485-46491504 None:intergenic 30.0%
! AAACTACATGACTTTTGTTC+TGG + chr5_1:46491564-46491583 None:intergenic 30.0%
!! TGAGTATTGATGCCATTTAT+CGG + chr5_1:46491643-46491662 None:intergenic 30.0%
GAAATATATATTTGGGGAAG+CGG - chr5_1:46492014-46492033 Msa0733250:five_prime_UTR 30.0%
AAATATATATTTGGGGAAGC+GGG - chr5_1:46492015-46492034 Msa0733250:five_prime_UTR 30.0%
TAAAGTCAAACTCTTGTTAC+GGG - chr5_1:46492115-46492134 Msa0733250:five_prime_UTR 30.0%
ACATGTAAGATCTGATGAGA+AGG + chr5_1:46487666-46487685 None:intergenic 35.0%
!! AATTTTGACGTGTACAAGTG+TGG - chr5_1:46488462-46488481 Msa0733250:CDS 35.0%
AAATAGCAGTTGTAGCACTA+TGG - chr5_1:46488558-46488577 Msa0733250:CDS 35.0%
! CACTGTAACATAGTGGAATT+TGG - chr5_1:46488669-46488688 Msa0733250:CDS 35.0%
TTTCCTTGGAAACATGATGT+TGG - chr5_1:46488747-46488766 Msa0733250:CDS 35.0%
TTTCCAACATCATGTTTCCA+AGG + chr5_1:46488753-46488772 None:intergenic 35.0%
TTAAGAGCTATAAAGGGGTA+AGG + chr5_1:46488967-46488986 None:intergenic 35.0%
! AATGCATCGAATCTTGTTTC+TGG - chr5_1:46489096-46489115 Msa0733250:CDS 35.0%
GGTGATAAACAATACAGCAA+CGG - chr5_1:46489117-46489136 Msa0733250:CDS 35.0%
TCTATAGACTCTTCTTCAGA+GGG - chr5_1:46489198-46489217 Msa0733250:CDS 35.0%
TTGAAAATGGTGAATGCAAC+GGG - chr5_1:46489241-46489260 Msa0733250:CDS 35.0%
!!! AAAACTGCTTTTTCTTCCTC+GGG - chr5_1:46489303-46489322 Msa0733250:CDS 35.0%
CGTCAGAGGAAAATATTGAA+AGG - chr5_1:46489334-46489353 Msa0733250:CDS 35.0%
GAAAGGGGTCAAATTGAAAA+CGG - chr5_1:46489351-46489370 Msa0733250:CDS 35.0%
AGAGAAAACAGTTGCTTATC+AGG - chr5_1:46489386-46489405 Msa0733250:CDS 35.0%
! AAAAGAACTAGTTCTTCCTC+CGG - chr5_1:46489426-46489445 Msa0733250:CDS 35.0%
GTTGGATGGAAATTGTGAAA+GGG - chr5_1:46489458-46489477 Msa0733250:CDS 35.0%
TTGGATGGAAATTGTGAAAG+GGG - chr5_1:46489459-46489478 Msa0733250:CDS 35.0%
TGAAAGGGGTCAAATTGAAA+AGG - chr5_1:46489350-46489369 Msa0733250:CDS 35.0%
GAAAGGGGTCAAATTGAAAA+GGG - chr5_1:46489351-46489370 Msa0733250:CDS 35.0%
TCATTCTCCTGAGAAATAAC+TGG + chr5_1:46489519-46489538 None:intergenic 35.0%
TTCTCAGGAGAATGATTTGA+AGG - chr5_1:46489524-46489543 Msa0733250:CDS 35.0%
! CATTGGATAGAAATAGTGGA+AGG - chr5_1:46489577-46489596 Msa0733250:CDS 35.0%
GGAAGGGTTCAAATTGAAAA+TGG - chr5_1:46489594-46489613 Msa0733250:CDS 35.0%
GAAGAAGAAGAGCAAAGTAA+TGG - chr5_1:46489819-46489838 Msa0733250:CDS 35.0%
AACATGCCATTAGAAAGAAC+TGG - chr5_1:46489843-46489862 Msa0733250:CDS 35.0%
! ATGAGAATTCAGCTCTAGTA+GGG - chr5_1:46489907-46489926 Msa0733250:CDS 35.0%
!! AATGACAAATTGGTTCTGGT+AGG - chr5_1:46490059-46490078 Msa0733250:CDS 35.0%
GCAGAGTCGAAAGAATTAAA+TGG - chr5_1:46490119-46490138 Msa0733250:CDS 35.0%
GTCATTACAAAGAACAGAAG+AGG - chr5_1:46490151-46490170 Msa0733250:CDS 35.0%
CAAAGAACAGAAGAGGATAT+TGG - chr5_1:46490158-46490177 Msa0733250:CDS 35.0%
TATTGGTGGAAATGCATGTA+CGG - chr5_1:46490175-46490194 Msa0733250:CDS 35.0%
TCTCGTCATGAACTTATAGA+AGG - chr5_1:46490254-46490273 Msa0733250:CDS 35.0%
GCCATAGATTTGACGATTTA+AGG - chr5_1:46490315-46490334 Msa0733250:CDS 35.0%
! ATTTGACGATTTAAGGTCAG+CGG - chr5_1:46490322-46490341 Msa0733250:CDS 35.0%
AGAAGTTCTCATGCTTATGA+TGG - chr5_1:46490428-46490447 Msa0733250:CDS 35.0%
AAAGAGGTGATCATGCAAAT+CGG - chr5_1:46490633-46490652 Msa0733250:intron 35.0%
!!! AGAGGCATTTTGTATGGAAA+CGG + chr5_1:46490683-46490702 None:intergenic 35.0%
GAAGATGAAACTGTTGAGAA+TGG - chr5_1:46490823-46490842 Msa0733250:intron 35.0%
AAACAAACGAAAGACTCTCT+GGG - chr5_1:46490894-46490913 Msa0733250:intron 35.0%
! GGCTTTGGTATGAAGAAATA+TGG + chr5_1:46490925-46490944 None:intergenic 35.0%
! AGGGAGATTTTATCATGGTT+TGG - chr5_1:46490958-46490977 Msa0733250:intron 35.0%
GAAAATGCAAGCTATAGTCA+TGG - chr5_1:46491043-46491062 Msa0733250:CDS 35.0%
TTTCAATTGTTGTCCTCAAG+AGG - chr5_1:46491156-46491175 Msa0733250:five_prime_UTR 35.0%
TTCAATTGTTGTCCTCAAGA+GGG - chr5_1:46491157-46491176 Msa0733250:five_prime_UTR 35.0%
AATCTTGTGAACAGAGATAC+AGG - chr5_1:46491335-46491354 Msa0733250:intron 35.0%
ATCTTGTGAACAGAGATACA+GGG - chr5_1:46491336-46491355 Msa0733250:intron 35.0%
! TAATGTCGCTTAGTCAAACT+CGG + chr5_1:46491397-46491416 None:intergenic 35.0%
TTGAAAAGGAGAAAATCTGC+GGG + chr5_1:46491484-46491503 None:intergenic 35.0%
GTATGTCATAAGCTCAAATG+TGG - chr5_1:46491508-46491527 Msa0733250:intron 35.0%
TCTTATACTCCAAATGCTGT+TGG - chr5_1:46491583-46491602 Msa0733250:intron 35.0%
ATGCAAAACAAGCCGATAAA+TGG - chr5_1:46491628-46491647 Msa0733250:intron 35.0%
GTGTCATATTCCGATGATTA+TGG - chr5_1:46491688-46491707 Msa0733250:intron 35.0%
GACAGAATGACCATAATCAT+CGG + chr5_1:46491701-46491720 None:intergenic 35.0%
AGTAAAAGCTATTCCTCAGA+AGG - chr5_1:46491721-46491740 Msa0733250:intron 35.0%
GTTATAGCATCAACAGTATC+AGG + chr5_1:46491814-46491833 None:intergenic 35.0%
TGTTGATGCTATAACAGAGA+AGG - chr5_1:46491819-46491838 Msa0733250:intron 35.0%
AATATATATTTGGGGAAGCG+GGG - chr5_1:46492016-46492035 Msa0733250:five_prime_UTR 35.0%
! CGGGGCATTATTATTGATTA+AGG - chr5_1:46492034-46492053 Msa0733250:five_prime_UTR 35.0%
AAAGTCAAACTCTTGTTACG+GGG - chr5_1:46492116-46492135 Msa0733250:five_prime_UTR 35.0%
! AACTTGATTTTCAGCTCTGT+TGG + chr5_1:46492160-46492179 None:intergenic 35.0%
!! CTGAAAATCAAGTTGAAGCT+GGG - chr5_1:46492166-46492185 Msa0733250:five_prime_UTR 35.0%
TTCATTCACAATCTTCTGGC+TGG + chr5_1:46488302-46488321 None:intergenic 40.0%
ACTAATGGCAGTACAAAGAC+TGG + chr5_1:46488353-46488372 None:intergenic 40.0%
!! TACAAAGTGTTGTCACATCG+TGG - chr5_1:46488630-46488649 Msa0733250:CDS 40.0%
CGCTTATCACTGTAACATAG+TGG - chr5_1:46488662-46488681 Msa0733250:CDS 40.0%
! TCTCGAAGTTTCGTTTTCCT+TGG - chr5_1:46488733-46488752 Msa0733250:CDS 40.0%
GTCTATAGACTCTTCTTCAG+AGG - chr5_1:46489197-46489216 Msa0733250:CDS 40.0%
CTATAGACTCTTCTTCAGAG+GGG - chr5_1:46489199-46489218 Msa0733250:CDS 40.0%
TGAAAATGGTGAATGCAACG+GGG - chr5_1:46489242-46489261 Msa0733250:CDS 40.0%
! TTTTCTCTCGAACCATTCTC+CGG + chr5_1:46489285-46489304 None:intergenic 40.0%
CGTTGGATGGAAATTGTGAA+AGG - chr5_1:46489457-46489476 Msa0733250:CDS 40.0%
!! AGAGCAACCAGTTATTTCTC+AGG - chr5_1:46489509-46489528 Msa0733250:CDS 40.0%
AGATGAAGAACCAGAAGATG+AGG - chr5_1:46489656-46489675 Msa0733250:CDS 40.0%
TAGATATCCACCTCATCTTC+TGG + chr5_1:46489669-46489688 None:intergenic 40.0%
CTCATTTGAGTAACCTCTGT+TGG + chr5_1:46489724-46489743 None:intergenic 40.0%
! GATGAGAATTCAGCTCTAGT+AGG - chr5_1:46489906-46489925 Msa0733250:CDS 40.0%
! TGAGAATTCAGCTCTAGTAG+GGG - chr5_1:46489908-46489927 Msa0733250:CDS 40.0%
! GTGAAGTCTGAAGTAGACTT+CGG - chr5_1:46489930-46489949 Msa0733250:CDS 40.0%
CAGATCTGGAAACTAACTTC+TGG + chr5_1:46490016-46490035 None:intergenic 40.0%
! CAGAAGTTAGTTTCCAGATC+TGG - chr5_1:46490014-46490033 Msa0733250:CDS 40.0%
AGCTCAGCAACAGTTGTTAA+TGG - chr5_1:46490086-46490105 Msa0733250:CDS 40.0%
TCTTTCGACTCTGCATTATC+TGG + chr5_1:46490113-46490132 None:intergenic 40.0%
AGAACAGAAGAGGATATTGG+TGG - chr5_1:46490161-46490180 Msa0733250:CDS 40.0%
GAGAACTTTGCGTCTGAAAA+AGG - chr5_1:46490215-46490234 Msa0733250:CDS 40.0%
! TTTGACGATTTAAGGTCAGC+GGG - chr5_1:46490323-46490342 Msa0733250:CDS 40.0%
TGTCTCTTCTAACGATGGAA+TGG - chr5_1:46490454-46490473 Msa0733250:CDS 40.0%
GTGAAACATAGCTTGAACTG+AGG + chr5_1:46490775-46490794 None:intergenic 40.0%
TCAACAGTTTCATCTTCTCC+TGG + chr5_1:46490820-46490839 None:intergenic 40.0%
! TGTTTCCTTGTTTGCATGGT+TGG + chr5_1:46490879-46490898 None:intergenic 40.0%
! CGTTTGTTTCCTTGTTTGCA+TGG + chr5_1:46490883-46490902 None:intergenic 40.0%
GAAACAAACGAAAGACTCTC+TGG - chr5_1:46490893-46490912 Msa0733250:intron 40.0%
AACAAACGAAAGACTCTCTG+GGG - chr5_1:46490895-46490914 Msa0733250:intron 40.0%
AAAGCCATGATTCACACGAA+GGG - chr5_1:46490939-46490958 Msa0733250:intron 40.0%
! CACGAAGGGAGATTTTATCA+TGG - chr5_1:46490953-46490972 Msa0733250:intron 40.0%
! ATCATGGTTTGGATTACCCT+AGG - chr5_1:46490969-46490988 Msa0733250:intron 40.0%
! TCATGGTTTGGATTACCCTA+GGG - chr5_1:46490970-46490989 Msa0733250:intron 40.0%
GCAAATGCAAGCTATAGTCA+TGG - chr5_1:46490998-46491017 Msa0733250:intron 40.0%
ATATGGTGTGCATTGCTTGT+TGG + chr5_1:46491124-46491143 None:intergenic 40.0%
TCAATTGTTGTCCTCAAGAG+GGG - chr5_1:46491158-46491177 Msa0733250:five_prime_UTR 40.0%
TACAAATCTTCACGCTGGTA+AGG + chr5_1:46491214-46491233 None:intergenic 40.0%
ACCAGCGTGAAGATTTGTAT+CGG - chr5_1:46491215-46491234 Msa0733250:five_prime_UTR 40.0%
GATAAGCAACGACTATGAAC+TGG + chr5_1:46491247-46491266 None:intergenic 40.0%
ATTAACCATTGCGGACTTGA+AGG + chr5_1:46491283-46491302 None:intergenic 40.0%
GTTTGACTAAGCGACATTAC+CGG - chr5_1:46491398-46491417 Msa0733250:intron 40.0%
ATATCAAGGTCACTTGATGG+TGG + chr5_1:46491610-46491629 None:intergenic 40.0%
TGCATATCAAGGTCACTTGA+TGG + chr5_1:46491613-46491632 None:intergenic 40.0%
!!! TCGGCTTGTTTTGCATATCA+AGG + chr5_1:46491624-46491643 None:intergenic 40.0%
ACAGTATCAGGAGAGACAAT+TGG + chr5_1:46491802-46491821 None:intergenic 40.0%
AAGGAGAAAACTGCTTCAAG+AGG - chr5_1:46491838-46491857 Msa0733250:five_prime_UTR 40.0%
CCTTCTGATGACATATTGGA+TGG + chr5_1:46491883-46491902 None:intergenic 40.0%
CCATCCAATATGTCATCAGA+AGG - chr5_1:46491880-46491899 Msa0733250:five_prime_UTR 40.0%
CTCTCCTTCTGATGACATAT+TGG + chr5_1:46491887-46491906 None:intergenic 40.0%
CAATATGTCATCAGAAGGAG+AGG - chr5_1:46491885-46491904 Msa0733250:five_prime_UTR 40.0%
!!! TGATGAAGTGCTGAAGGTTT+TGG + chr5_1:46491925-46491944 None:intergenic 40.0%
!! ATCAGTTGATGAAGTGCTGA+AGG + chr5_1:46491931-46491950 None:intergenic 40.0%
TTCAGCACTTCATCAACTGA+TGG - chr5_1:46491930-46491949 Msa0733250:five_prime_UTR 40.0%
TCAGCACTTCATCAACTGAT+GGG - chr5_1:46491931-46491950 Msa0733250:five_prime_UTR 40.0%
! ATTTTCTAACCGTCTCTGAG+AGG - chr5_1:46492069-46492088 Msa0733250:five_prime_UTR 40.0%
AGTTTAACTCCTCTCAGAGA+CGG + chr5_1:46492081-46492100 None:intergenic 40.0%
!! GCTGAAAATCAAGTTGAAGC+TGG - chr5_1:46492165-46492184 Msa0733250:five_prime_UTR 40.0%
GGTGAGAGAAATTCATGTGG+TGG + chr5_1:46487611-46487630 None:intergenic 45.0%
GCAGGTGAGAGAAATTCATG+TGG + chr5_1:46487614-46487633 None:intergenic 45.0%
AGAGAAAATGAACCTGCAGC+AGG + chr5_1:46487632-46487651 None:intergenic 45.0%
TTATGCAGGCAGTGAAAGCT+AGG - chr5_1:46488253-46488272 Msa0733250:CDS 45.0%
TGAAGCAGCAGCCTACATTT+AGG + chr5_1:46488432-46488451 None:intergenic 45.0%
TTTGACGTGTACAAGTGTGG+TGG - chr5_1:46488465-46488484 Msa0733250:CDS 45.0%
CTAGTATTGCGGAACAACAG+CGG + chr5_1:46488604-46488623 None:intergenic 45.0%
TGCATCAGTCTCGTTTGAAC+TGG + chr5_1:46489064-46489083 None:intergenic 45.0%
TCTTCTTCAGAGGGGAATGA+AGG - chr5_1:46489207-46489226 Msa0733250:CDS 45.0%
TCCATCCAACGAACATTCTC+CGG + chr5_1:46489448-46489467 None:intergenic 45.0%
TGAAGAACCAGAAGATGAGG+TGG - chr5_1:46489659-46489678 Msa0733250:CDS 45.0%
TTACTCAAATGAGCTCCCAC+AGG - chr5_1:46489731-46489750 Msa0733250:CDS 45.0%
GTTTCCAGATCTGGATCAGA+TGG - chr5_1:46490023-46490042 Msa0733250:CDS 45.0%
TTGTCCATCTGATCCAGATC+TGG + chr5_1:46490030-46490049 None:intergenic 45.0%
GAAATGCATGTACGGACGAA+AGG - chr5_1:46490183-46490202 Msa0733250:CDS 45.0%
TTGGAGATTAATGGTGCGCT+TGG - chr5_1:46490380-46490399 Msa0733250:CDS 45.0%
TGGAGATTAATGGTGCGCTT+GGG - chr5_1:46490381-46490400 Msa0733250:CDS 45.0%
! GCATGAGAACTTCTAGCTGT+TGG + chr5_1:46490422-46490441 None:intergenic 45.0%
CTAACGATGGAATGGATGAG+CGG - chr5_1:46490462-46490481 Msa0733250:CDS 45.0%
! AACAGCACCTTTTCCCTTTC+TGG + chr5_1:46490525-46490544 None:intergenic 45.0%
!! GAGGTTCTGGAGACTAAAAG+AGG - chr5_1:46490617-46490636 Msa0733250:intron 45.0%
!!! CCATGGAGAGGCATTTTGTA+TGG + chr5_1:46490689-46490708 None:intergenic 45.0%
CCATACAAAATGCCTCTCCA+TGG - chr5_1:46490686-46490705 Msa0733250:intron 45.0%
TCCACTTTCATAGCCAGAGT+GGG + chr5_1:46490720-46490739 None:intergenic 45.0%
TTCCACTTTCATAGCCAGAG+TGG + chr5_1:46490721-46490740 None:intergenic 45.0%
GTTTCATCTTCTCCTGGTCA+GGG + chr5_1:46490814-46490833 None:intergenic 45.0%
AGTTTCATCTTCTCCTGGTC+AGG + chr5_1:46490815-46490834 None:intergenic 45.0%
CAGAACCAACCATGCAAACA+AGG - chr5_1:46490871-46490890 Msa0733250:intron 45.0%
ACAAACGAAAGACTCTCTGG+GGG - chr5_1:46490896-46490915 Msa0733250:intron 45.0%
CTTCGTGTGAATCATGGCTT+TGG + chr5_1:46490940-46490959 None:intergenic 45.0%
CAAAGCCATGATTCACACGA+AGG - chr5_1:46490938-46490957 Msa0733250:intron 45.0%
ATCTCCCTTCGTGTGAATCA+TGG + chr5_1:46490946-46490965 None:intergenic 45.0%
! CATGGTTTGGATTACCCTAG+GGG - chr5_1:46490971-46490990 Msa0733250:intron 45.0%
! ATGGTTTGGATTACCCTAGG+GGG - chr5_1:46490972-46490991 Msa0733250:intron 45.0%
TGCAAGCTATAGTCATGGCT+TGG - chr5_1:46491003-46491022 Msa0733250:intron 45.0%
! TCATGGCTTGGATTACCCTA+GGG - chr5_1:46491015-46491034 Msa0733250:CDS 45.0%
ATGGCATCAACATGCACCAA+AGG - chr5_1:46491062-46491081 Msa0733250:CDS 45.0%
!! CTTGTTGGCTCGGTTGAATA+AGG + chr5_1:46491109-46491128 None:intergenic 45.0%
TCACGCTGGTAAGGAAAACA+CGG + chr5_1:46491205-46491224 None:intergenic 45.0%
CAACGACTATGAACTGGATG+AGG + chr5_1:46491241-46491260 None:intergenic 45.0%
CTTATCCTTCAAGTCCGCAA+TGG - chr5_1:46491275-46491294 Msa0733250:intron 45.0%
CAAATGTGGTGCATGTCAAG+AGG - chr5_1:46491522-46491541 Msa0733250:intron 45.0%
TCAGTCTGAACCTCATGTTG+CGG - chr5_1:46491660-46491679 Msa0733250:intron 45.0%
AGAAACAGGATCTCCTTCTG+AGG + chr5_1:46491737-46491756 None:intergenic 45.0%
TGAAACGGTGCAACAGAAAC+AGG + chr5_1:46491751-46491770 None:intergenic 45.0%
!! TCTTAGCACTTGACTTGGAG+AGG + chr5_1:46491962-46491981 None:intergenic 45.0%
TCTCCAAGTCAAGTGCTAAG+AGG - chr5_1:46491961-46491980 Msa0733250:five_prime_UTR 45.0%
TCCAGTCGATGAAGGAAAAG+AGG - chr5_1:46491987-46492006 Msa0733250:five_prime_UTR 45.0%
! ACCTCTTTTCCTTCATCGAC+TGG + chr5_1:46491991-46492010 None:intergenic 45.0%
GAAGCTGGGAATGTCAAGAA+AGG - chr5_1:46492180-46492199 Msa0733250:five_prime_UTR 45.0%
GAATTTCTCTCACCTGCTGC+AGG - chr5_1:46487617-46487636 Msa0733250:CDS 50.0%
!! GTGTACAAGTGTGGTGGATG+TGG - chr5_1:46488471-46488490 Msa0733250:CDS 50.0%
CTTCAGAGGGGAATGAAGGA+AGG - chr5_1:46489211-46489230 Msa0733250:CDS 50.0%
CCATTCTCCGGAGTAGTAAC+CGG + chr5_1:46489273-46489292 None:intergenic 50.0%
TTCCTCCGGAGAATGTTCGT+TGG - chr5_1:46489440-46489459 Msa0733250:CDS 50.0%
ATCCAACGAACATTCTCCGG+AGG + chr5_1:46489445-46489464 None:intergenic 50.0%
TCCGGAGAATGTTCGTTGGA+TGG - chr5_1:46489444-46489463 Msa0733250:CDS 50.0%
AGGCATACAGTGTCCAACAG+AGG - chr5_1:46489708-46489727 Msa0733250:CDS 50.0%
GGAGATTAATGGTGCGCTTG+GGG - chr5_1:46490382-46490401 Msa0733250:CDS 50.0%
GGCAGTGTCTCTTCTAACGA+TGG - chr5_1:46490449-46490468 Msa0733250:CDS 50.0%
!! TTTTGAGGGAGGCTCCAGAA+AGG - chr5_1:46490508-46490527 Msa0733250:intron 50.0%
TTTGAGGGAGGCTCCAGAAA+GGG - chr5_1:46490509-46490528 Msa0733250:intron 50.0%
CCACTTTCATAGCCAGAGTG+GGG + chr5_1:46490719-46490738 None:intergenic 50.0%
! TGGTTTGGATTACCCTAGGG+GGG - chr5_1:46490973-46490992 Msa0733250:intron 50.0%
TTGCATTTGCATCCCCCCTA+GGG + chr5_1:46490988-46491007 None:intergenic 50.0%
! GTCATGGCTTGGATTACCCT+AGG - chr5_1:46491014-46491033 Msa0733250:CDS 50.0%
! CATGGCTTGGATTACCCTAG+GGG - chr5_1:46491016-46491035 Msa0733250:CDS 50.0%
! ATGGCTTGGATTACCCTAGG+GGG - chr5_1:46491017-46491036 Msa0733250:CDS 50.0%
! TTGCATTTTCACCCCCCCTA+GGG + chr5_1:46491033-46491052 None:intergenic 50.0%
GCATCAACATGCACCAAAGG+CGG - chr5_1:46491065-46491084 Msa0733250:CDS 50.0%
GCGAAAAGTTATGCCGCCTT+TGG + chr5_1:46491081-46491100 None:intergenic 50.0%
! GTGTGCATTGCTTGTTGGCT+CGG + chr5_1:46491119-46491138 None:intergenic 50.0%
GCCGATACAAATCTTCACGC+TGG + chr5_1:46491219-46491238 None:intergenic 50.0%
! GATGGTGGTCCAACAGCATT+TGG + chr5_1:46491595-46491614 None:intergenic 50.0%
AAGAGGACCTAGCACGAGTA+AGG - chr5_1:46491855-46491874 Msa0733250:five_prime_UTR 50.0%
!! GAAGGTTTTGGCAGTGACTG+TGG + chr5_1:46491913-46491932 None:intergenic 50.0%
GCACCTCTTAGCACTTGACT+TGG + chr5_1:46491967-46491986 None:intergenic 50.0%
TCAGCTCTGTTGGAAGTCCA+CGG + chr5_1:46492150-46492169 None:intergenic 50.0%
CCGGTTACTACTCCGGAGAA+TGG - chr5_1:46489270-46489289 Msa0733250:CDS 55.0%
CTCTGACGAACATTCTCCCG+AGG + chr5_1:46489322-46489341 None:intergenic 55.0%
CTCGGGAGAATGTTCGTCAG+AGG - chr5_1:46489320-46489339 Msa0733250:CDS 55.0%
TCACTTCTGCTGAGGCCTGT+GGG + chr5_1:46489749-46489768 None:intergenic 55.0%
ATCACTTCTGCTGAGGCCTG+TGG + chr5_1:46489750-46489769 None:intergenic 55.0%
ACAGGCCTCAGCAGAAGTGA+TGG - chr5_1:46489749-46489768 Msa0733250:CDS 55.0%
GTCTGCCATCACTTCTGCTG+AGG + chr5_1:46489757-46489776 None:intergenic 55.0%
GGAATGGATGAGCGGTTCCT+CGG - chr5_1:46490470-46490489 Msa0733250:CDS 55.0%
GGAGGCTCCAGAAAGGGAAA+AGG - chr5_1:46490515-46490534 Msa0733250:intron 55.0%
TGGGGACTACTTCCATGGAG+AGG + chr5_1:46490701-46490720 None:intergenic 55.0%
CAGAGTGGGGACTACTTCCA+TGG + chr5_1:46490706-46490725 None:intergenic 55.0%
CATGGAAGTAGTCCCCACTC+TGG - chr5_1:46490704-46490723 Msa0733250:intron 55.0%
CCCCACTCTGGCTATGAAAG+TGG - chr5_1:46490716-46490735 Msa0733250:intron 55.0%
TGTTTCACCTGACTCCGTCG+AGG - chr5_1:46490787-46490806 Msa0733250:intron 55.0%
CTTGCATTTGCATCCCCCCT+AGG + chr5_1:46490989-46491008 None:intergenic 55.0%
! TGGCTTGGATTACCCTAGGG+GGG - chr5_1:46491018-46491037 Msa0733250:CDS 55.0%
! CTTGCATTTTCACCCCCCCT+AGG + chr5_1:46491034-46491053 None:intergenic 55.0%
TCCTCAAGAGGGGCAACACT+TGG - chr5_1:46491168-46491187 Msa0733250:five_prime_UTR 55.0%
CCTCAAGAGGGGCAACACTT+GGG - chr5_1:46491169-46491188 Msa0733250:five_prime_UTR 55.0%
CGCTGGTAAGGAAAACACGG+AGG + chr5_1:46491202-46491221 None:intergenic 55.0%
CTCGCATGCGAGTGGTGAAA+CGG + chr5_1:46491766-46491785 None:intergenic 55.0%
GATGGAGCCTTACTCGTGCT+AGG + chr5_1:46491865-46491884 None:intergenic 55.0%
!! AGAGGTGCTCCAGTCGATGA+AGG - chr5_1:46491979-46491998 Msa0733250:five_prime_UTR 55.0%
AGCTCTGTTGGAAGTCCACG+GGG + chr5_1:46492148-46492167 None:intergenic 55.0%
CAGCTCTGTTGGAAGTCCAC+GGG + chr5_1:46492149-46492168 None:intergenic 55.0%
GGATGTGGCACGACCCTTCA+AGG - chr5_1:46488486-46488505 Msa0733250:CDS 60.0%
TGAATGCAACGGGGAGCAGC+CGG - chr5_1:46489251-46489270 Msa0733250:CDS 60.0%
GGAGCAGCCGGTTACTACTC+CGG - chr5_1:46489263-46489282 Msa0733250:CDS 60.0%
GGCTTGGATTACCCTAGGGG+GGG - chr5_1:46491019-46491038 Msa0733250:CDS 60.0%
! CCCAAGTGTTGCCCCTCTTG+AGG + chr5_1:46491172-46491191 None:intergenic 60.0%
CGACATTACCGGCCAGTAGC+AGG - chr5_1:46491409-46491428 Msa0733250:intron 60.0%
!! AACGGTGCTGCACCTGCTAC+TGG + chr5_1:46491424-46491443 None:intergenic 60.0%
GACACGCGATCCGCAACATG+AGG + chr5_1:46491673-46491692 None:intergenic 60.0%
TGTGTGCACTCGCATGCGAG+TGG + chr5_1:46491774-46491793 None:intergenic 60.0%
!! GTTACGGGGTTGATACCCCG+TGG - chr5_1:46492130-46492149 Msa0733250:five_prime_UTR 60.0%
TCAGGGTCCTCGACGGAGTC+AGG + chr5_1:46490797-46490816 None:intergenic 65.0%
CTCCTGGTCAGGGTCCTCGA+CGG + chr5_1:46490804-46490823 None:intergenic 65.0%
GTGCTGCACCTGCTACTGGC+CGG + chr5_1:46491420-46491439 None:intergenic 65.0%
CTCCGTCGAGGACCCTGACC+AGG - chr5_1:46490799-46490818 Msa0733250:intron 70.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 46487298 46492221 46487298 ID=Msa0733250;Name=Msa0733250
chr5_1 mRNA 46487298 46492221 46487298 ID=Msa0733250-mRNA-1;Parent=Msa0733250;Name=Msa0733250-mRNA-1;_AED=0.04;_eAED=0.04;_QI=522|0.66|0.5|1|0.66|0.5|4|0|1068
chr5_1 exon 46487298 46487399 46487298 ID=Msa0733250-mRNA-1:exon:13246;Parent=Msa0733250-mRNA-1
chr5_1 exon 46487511 46490494 46487511 ID=Msa0733250-mRNA-1:exon:13245;Parent=Msa0733250-mRNA-1
chr5_1 exon 46491012 46491258 46491012 ID=Msa0733250-mRNA-1:exon:13244;Parent=Msa0733250-mRNA-1
chr5_1 exon 46491826 46492221 46491826 ID=Msa0733250-mRNA-1:exon:13243;Parent=Msa0733250-mRNA-1
chr5_1 five_prime_UTR 46491826 46492221 46491826 ID=Msa0733250-mRNA-1:five_prime_utr;Parent=Msa0733250-mRNA-1
chr5_1 five_prime_UTR 46491133 46491258 46491133 ID=Msa0733250-mRNA-1:five_prime_utr;Parent=Msa0733250-mRNA-1
chr5_1 CDS 46491012 46491132 46491012 ID=Msa0733250-mRNA-1:cds;Parent=Msa0733250-mRNA-1
chr5_1 CDS 46487511 46490494 46487511 ID=Msa0733250-mRNA-1:cds;Parent=Msa0733250-mRNA-1
chr5_1 CDS 46487298 46487399 46487298 ID=Msa0733250-mRNA-1:cds;Parent=Msa0733250-mRNA-1
Gene Sequence

>Msa0733250

ATGTCTAGTGAAACGGCTCCCAAACCTCGATTTGTATTATGTCCTAAATGTAGGCTGCTGCTTCAAGAGCCTCAAAATTTTGACGTGTACAAGTGTGGTGGATGTGGCACGACCCTTCAAGCTAAGAAACGAAAAAGCAGAGCTGCAAATTCAGAAGCCAGTTCAAACGAGACTGATGCAGCTGCTCTTAGAAATGCATCGAATCTTGTTTCTGGTGATAAACAATACAGCAACGGAGAGAAGCTAGTTAGTCCTCAAAAGAATGTTTCAAGAGAAAAAGCAACTGATTCTTTGTCTATAGACTCTTCTTCAGAGGGGAATGAAGGAAGGAATCAAATTGAAAATGGTGAATGCAACGGGGAGCAGCCGGTTACTACTCCGGAGAATGGTTCGAGAGAAAAAACTGCTTTTTCTTCCTCGGGAGAATGTTCGTCAGAGGAAAATATTGAAAGGGGTCAAATTGAAAACGGTGAATGCAATGAAGAGAAAACAGTTGCTTATCAGGAGAATATTTTGAGAGAAAAAAGAACTAGTTCTTCCTCCGGAGAATGTTCGTTGGATGGAAATTGTGAAAGGGGTCAAATTGAAAAGGGTGAATGCGATGAAGAGCAACCAGTTATTTCTCAGGAGAATGATTTGAAGGAAGAAGCAACTAGTTCTTCAGAAGAATGTTCATTGGATAGAAATAGTGGAAGGGTTCAAATTGAAAATGGTAAACGTGACGAAGAGAAGCTTGTACTGTTTAATTTATCAGATGAAGAACCAGAAGATGAGGTGGATATCTATAAGTTATCAGATATCAGAAGGCATACAGTGTCCAACAGAGGTTACTCAAATGAGCTCCCACAGGCCTCAGCAGAAGTGATGGCAGACAATTCAGTTGAAAAACAAAATGAGACTAACTTGAAACTAGAAGAAGAAGAAGAGCAAAGTAATGGAAACATGCCATTAGAAAGAACTGGAAATCAGTTAATTAGTGCACTGGACAGAGAAGATGCTAGTGATGAGAATTCAGCTCTAGTAGGGGTGAAGTCTGAAGTAGACTTCGGAGAAAGTGATTTAGAAGTAGCAAGAGAGCTAATTAATCGAAACATGTCACAAAGAGCAAACCAGAAGTTAGTTTCCAGATCTGGATCAGATGGACAATGTGTCAATAATGACAAATTGGTTCTGGTAGGTGACAGCTCAGCAACAGTTGTTAATGGACCAGATAATGCAGAGTCGAAAGAATTAAATGGTAAAAACTTGTCATTACAAAGAACAGAAGAGGATATTGGTGGAAATGCATGTACGGACGAAAGGTTGAGTACTGAGAACTTTGCGTCTGAAAAAGGAAACATTTCATATGTTTCTCGTCATGAACTTATAGAAGGTACATCTGATAATCATGCATATTCTCCCAAAAATATTCGCCATAGATTTGACGATTTAAGGTCAGCGGGTACATTTGACAGTGCAGAAGTAAATAATCTGAGTTTGGAGATTAATGGTGCGCTTGGGGAATTGTCTAAATCTCCAACAGCTAGAAGTTCTCATGCTTATGATGGCAGTGTCTCTTCTAACGATGGAATGGATGAGCGGTTCCTCGGTCAAAATTTATATTCTTTTGAGGGAGGCTCCAGAAAGGGAAAAGGTGCTGTTAAAAGTAGCATGTTATATGAAGATGTTGAAATGCAAAGTCAGTCGAATTTTCCCAATAGAATGTATCAAAATGAGGTTCTGGAGACTAAAAGAGGTGATCATGCAAATCGGATGCGAACAAAAACTGACGAGTTTCCGTTTCCATACAAAATGCCTCTCCATGGAAGTAGTCCCCACTCTGGCTATGAAAGTGGAAGTCCATCCAATCAAATACACAATGAACTCTACCTCAGTTCAAGCTATGTTTCACCTGACTCCGTCGAGGACCCTGACCAGGAGAAGATGAAACTGTTGAGAATGGTTTATAAATTGCAGGATCAGCTCAACAGAACCAACCATGCAAACAAGGAAACAAACGAAAGACTCTCTGGGGGAAACCATATTTCTTCATACCAAAGCCATGATTCACACGAAGGGAGATTTTATCATGGTTTGGATTACCCTAGGGGGGATGCAAATGCAAGCTATAGTCATGGCTTGGATTACCCTAGGGGGGGTGAAAATGCAAGCTATAGTCATGGCATCAACATGCACCAAAGGCGGCATAACTTTTCGCATGTACCTTATTCAACCGAGCCAACAAGCAATGCACACCATATTGATCATCCTTATTTCAATTGTTGTCCTCAAGAGGGGCAACACTTGGGAGAGTTTCCTCCGTGTTTTCCTTACCAGCGTGAAGATTTGTATCGGCCTCATCCAGTTCATAGTCGTTGCTTATCTCAGCATTCTTATCCTTCAAGTCCGCAATGGTTAATAAACTCAAATCATGTTCACGGCCGTGAAACAAAATCTTGTGAACAGAGATACAGGGCTGCCGAGATGAACTATACTAGAACTAGGGACAAGCCGAGTTTGACTAAGCGACATTACCGGCCAGTAGCAGGTGCAGCACCGTTTGTTACTTGTCATAAATGCTTAAATCTGCTGCAACTTCCCGCAGATTTTCTCCTTTTCAAAAGAGTATGTCATAAGCTCAAATGTGGTGCATGTCAAGAGGTACTTAAATTTTCTCTCCAGAACAAAAGTCATGTAGTTTCTTATACTCCAAATGCTGTTGGACCACCATCAAGTGACCTTGATATGCAAAACAAGCCGATAAATGGCATCAATACTCAGTCTGAACCTCATGTTGCGGATCGCGTGTCATATTCCGATGATTATGGTCATTCTGTCAGTAAAAGCTATTCCTCAGAAGGAGATCCTGTTTCTGTTGCACCGTTTCACCACTCGCATGCGAGTGCACACAATAATCCAATTGTCTCTCCTGATACTGTTGATGCTATAACAGAGAAGGAGAAAACTGCTTCAAGAGGACCTAGCACGAGTAAGGCTCCATCCAATATGTCATCAGAAGGAGAGGCACCACAGTCACTGCCAAAACCTTCAGCACTTCATCAACTGATGGGTTATTCCTCTCCAAGTCAAGTGCTAAGAGGTGCTCCAGTCGATGAAGGAAAAGAGTCAAACTCTTGTTACGGGGTTGATACCCCGTGGACTTCCAACAGAGCTGAAAATCAAGTTGAAGCTGGGAATGTCAAGAAAGGAATTATTTTCAAAATTTGA
Protein sequence

>Msa0733250

MSSETAPKPRFVLCPKCRLLLQEPQNFDVYKCGGCGTTLQAKKRKSRAANSEASSNETDAAALRNASNLVSGDKQYSNGEKLVSPQKNVSREKATDSLSIDSSSEGNEGRNQIENGECNGEQPVTTPENGSREKTAFSSSGECSSEENIERGQIENGECNEEKTVAYQENILREKRTSSSSGECSLDGNCERGQIEKGECDEEQPVISQENDLKEEATSSSEECSLDRNSGRVQIENGKRDEEKLVLFNLSDEEPEDEVDIYKLSDIRRHTVSNRGYSNELPQASAEVMADNSVEKQNETNLKLEEEEEQSNGNMPLERTGNQLISALDREDASDENSALVGVKSEVDFGESDLEVARELINRNMSQRANQKLVSRSGSDGQCVNNDKLVLVGDSSATVVNGPDNAESKELNGKNLSLQRTEEDIGGNACTDERLSTENFASEKGNISYVSRHELIEGTSDNHAYSPKNIRHRFDDLRSAGTFDSAEVNNLSLEINGALGELSKSPTARSSHAYDGSVSSNDGMDERFLGQNLYSFEGGSRKGKGAVKSSMLYEDVEMQSQSNFPNRMYQNEVLETKRGDHANRMRTKTDEFPFPYKMPLHGSSPHSGYESGSPSNQIHNELYLSSSYVSPDSVEDPDQEKMKLLRMVYKLQDQLNRTNHANKETNERLSGGNHISSYQSHDSHEGRFYHGLDYPRGDANASYSHGLDYPRGGENASYSHGINMHQRRHNFSHVPYSTEPTSNAHHIDHPYFNCCPQEGQHLGEFPPCFPYQREDLYRPHPVHSRCLSQHSYPSSPQWLINSNHVHGRETKSCEQRYRAAEMNYTRTRDKPSLTKRHYRPVAGAAPFVTCHKCLNLLQLPADFLLFKRVCHKLKCGACQEVLKFSLQNKSHVVSYTPNAVGPPSSDLDMQNKPINGINTQSEPHVADRVSYSDDYGHSVSKSYSSEGDPVSVAPFHHSHASAHNNPIVSPDTVDAITEKEKTASRGPSTSKAPSNMSSEGEAPQSLPKPSALHQLMGYSSPSQVLRGAPVDEGKESNSCYGVDTPWTSNRAENQVEAGNVKKGIIFKI*