AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1126240


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1126240 MtrunA17_Chr7g0266861 98.353 668 11 0 14 681 1 668 0.0 1349
Msa1126240 MtrunA17_Chr4g0026051 42.937 538 259 16 20 545 22 523 7.13e-108 340
Msa1126240 MtrunA17_Chr2g0321731 40.063 634 296 27 20 617 14 599 5.04e-99 317
Msa1126240 MtrunA17_Chr5g0397031 34.634 410 248 7 46 451 20 413 2.86e-57 205
Msa1126240 MtrunA17_Chr8g0347871 28.883 412 240 10 43 450 18 380 1.09e-36 145
Msa1126240 MtrunA17_Chr3g0098801 31.781 365 195 9 100 454 103 423 3.04e-34 139
Msa1126240 MtrunA17_Chr5g0444041 39.175 194 118 0 257 450 208 401 3.20e-32 132
Msa1126240 MtrunA17_Chr7g0275251 32.569 218 143 2 237 450 134 351 2.12e-24 107
Msa1126240 MtrunA17_Chr2g0288331 39.267 191 116 0 260 450 164 354 5.09e-24 106
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1126240 AT3G11590.1 57.764 644 210 22 1 628 1 598 0.0 600
Msa1126240 AT3G11590.2 59.829 468 151 14 166 628 1 436 1.17e-156 460
Msa1126240 AT5G22310.1 34.875 519 225 17 21 534 9 419 7.53e-55 195
Msa1126240 AT5G41620.1 28.074 488 296 9 100 568 46 497 3.58e-37 147
Msa1126240 AT1G50660.1 32.573 307 177 4 234 517 212 511 6.95e-37 147
Msa1126240 AT5G41620.4 29.381 388 241 5 183 568 24 380 1.29e-35 141
Msa1126240 AT5G41620.3 29.381 388 241 5 183 568 24 380 1.29e-35 141
Msa1126240 AT3G20350.1 38.021 192 119 0 259 450 213 404 1.14e-33 137
Msa1126240 AT5G41620.2 29.700 367 225 5 204 568 3 338 2.30e-33 134
Msa1126240 AT1G64180.1 30.337 356 180 9 45 386 31 332 1.91e-29 124
Msa1126240 AT2G46250.1 28.571 385 204 12 43 424 13 329 2.67e-22 101
Msa1126240 AT2G46250.2 35.577 208 114 5 217 424 51 238 7.10e-20 92.8

Find 193 sgRNAs with CRISPR-Local

Find 269 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTCTCTTGGAAGCTATTTA+TGG 0.131870 7_3:+77752448 None:intergenic
CTATTCCATCTCCTGAGTTT+TGG 0.222833 7_3:+77752657 None:intergenic
CTTTGTGTTGATGAATTAAT+TGG 0.286331 7_3:+77755629 None:intergenic
TAAATCAGTGAAAGGATTAA+AGG 0.286783 7_3:-77752561 Msa1126240:CDS
GAATCAAACCAACCGATTAA+AGG 0.291217 7_3:+77752024 None:intergenic
CAGTATGCAGAGCTGATATA+AGG 0.298646 7_3:+77753602 None:intergenic
AGTGATTACGTGGCGGAATA+TGG 0.320034 7_3:+77755687 None:intergenic
AGGAAGTTAAAACAAAAGAT+AGG 0.326485 7_3:-77755183 Msa1126240:CDS
ATCAAATACTAGCTGGTTCC+AGG 0.332122 7_3:-77752538 Msa1126240:CDS
ATTTAATAAGGAAGTCTAAA+AGG 0.333697 7_3:-77752361 Msa1126240:CDS
AAATGGAGAAAAGCTTCTTT+TGG 0.335316 7_3:+77752275 None:intergenic
ACTGCTAGGTCTATTCGTTC+TGG 0.342193 7_3:-77755154 Msa1126240:CDS
CTCTCTTGGAAGCTATTTAT+GGG 0.346422 7_3:+77752449 None:intergenic
CCAATCGAGGAAGAAATAAA+AGG 0.350026 7_3:-77752779 Msa1126240:CDS
CTTCTTTATCTTCAGTATGA+TGG 0.351025 7_3:+77752948 None:intergenic
TTGCCGAAGAAAAGGCTTCT+TGG 0.356338 7_3:-77753492 Msa1126240:CDS
GTGAGGCTCATAATTTAATA+AGG 0.357238 7_3:-77752373 Msa1126240:CDS
ACATCACCATGTTGGTCCTT+TGG 0.357896 7_3:-77754709 Msa1126240:CDS
TTCAAACGCGCTATTCTTGT+AGG 0.362288 7_3:-77755445 Msa1126240:CDS
CTCAACAATTTCTCGCTCCT+TGG 0.369601 7_3:+77753465 None:intergenic
TATATCAGATGGAGTGGAAT+GGG 0.374464 7_3:-77752702 Msa1126240:CDS
GCATTCTATAGAGTTAAATA+TGG 0.379581 7_3:-77752867 Msa1126240:CDS
TGATCACGTGAAAATGAAAA+AGG 0.382217 7_3:-77755203 Msa1126240:CDS
CCACCGCCGCCGTCGCAATC+GGG 0.394444 7_3:-77755322 Msa1126240:CDS
CCCGATTGCGACGGCGGCGG+TGG 0.395971 7_3:+77755322 None:intergenic
TCCACCGCCGCCGTCGCAAT+CGG 0.402160 7_3:-77755323 Msa1126240:CDS
GCCTTGCAATGTCCTTTAAT+CGG 0.403383 7_3:-77752036 Msa1126240:three_prime_UTR
TCAACGTCAGCATATATTAC+AGG 0.406198 7_3:+77752093 None:intergenic
TTGACCAATATGAGTAAGTA+TGG 0.406666 7_3:-77752197 Msa1126240:three_prime_UTR
GCATTGTAGCATGTCTCTCT+TGG 0.406927 7_3:+77752435 None:intergenic
TGGTTGGATGAAATGGAGTT+GGG 0.406955 7_3:+77755711 None:intergenic
GAAAACTAGCGGCGACGCTT+TGG 0.407948 7_3:-77755267 Msa1126240:CDS
TGCAATGTCCTTTAATCGGT+TGG 0.416024 7_3:-77752032 Msa1126240:three_prime_UTR
ATACTAGCTGGTTCCAGGCT+TGG 0.420308 7_3:-77752533 Msa1126240:CDS
GATTCCTTCGCCTAGTGTTA+AGG 0.423275 7_3:-77755233 Msa1126240:CDS
AGGGGTCTGTGCTCGAGATC+TGG 0.425971 7_3:+77753753 None:intergenic
TACAGGAGAAAAGGAAAGGA+AGG 0.427736 7_3:+77752110 None:intergenic
TCTCTCCTCGCGTAACATAT+CGG 0.429027 7_3:+77753153 None:intergenic
ACAATGGACATGATGATTCC+TGG 0.430441 7_3:-77755538 Msa1126240:CDS
AAGACCATACTTACTCATAT+TGG 0.436799 7_3:+77752193 None:intergenic
GGTTGTGAAAATTGTCTAGT+TGG 0.437193 7_3:+77752488 None:intergenic
AATCAAGGTTAGGGGAAGCC+AGG 0.438109 7_3:-77752397 Msa1126240:CDS
ATATGGATGGTTGGATGAAA+TGG 0.441919 7_3:+77755704 None:intergenic
AGCATATATTACAGGAGAAA+AGG 0.443265 7_3:+77752101 None:intergenic
GGGAATCCGATGAGCGTGAT+TGG 0.443834 7_3:+77755733 None:intergenic
GCTGGAGAGGGCTCGCCTAC+AGG 0.447781 7_3:-77753578 Msa1126240:CDS
AGAATGGATCGATCTGGAAT+TGG 0.448538 7_3:-77754786 Msa1126240:CDS
TCTCCTTTGTTTATCTATCT+CGG 0.449144 7_3:+77753231 None:intergenic
AGAATGCAGGTCACTTTCAC+CGG 0.449342 7_3:+77752883 None:intergenic
CAGCAAACAAGTAAGAGAAA+AGG 0.450636 7_3:-77753038 Msa1126240:CDS
ACATGTGTTATAAGTATAAC+CGG 0.451059 7_3:-77752154 Msa1126240:three_prime_UTR
AGCAAACAAGTAAGAGAAAA+GGG 0.451711 7_3:-77753037 Msa1126240:CDS
TTCTTTATCTTCAGTATGAT+GGG 0.453148 7_3:+77752949 None:intergenic
AACAAAATCAACTACAACAA+TGG 0.458687 7_3:-77755554 Msa1126240:CDS
TCTGATCTGAACGTTGTTCG+TGG 0.462528 7_3:+77753542 None:intergenic
GCTGCAATTGAATCTGTTGC+AGG 0.462769 7_3:-77753442 Msa1126240:CDS
CCTAGCAAGGGGTATTTGCT+TGG 0.468336 7_3:+77752303 None:intergenic
GGACATTGCAAGGCACAAAC+TGG 0.468885 7_3:+77752045 None:intergenic
AAAGCTTGAACAAGAAGCTT+GGG 0.470601 7_3:-77753381 Msa1126240:CDS
TGACGTTGACTAAGAAAACT+TGG 0.476090 7_3:-77752079 Msa1126240:three_prime_UTR
GACGAAAGCATCCCTTCTTA+AGG 0.477775 7_3:-77753344 Msa1126240:CDS
CATGCTACAATGCAGGGAAA+TGG 0.478843 7_3:-77752425 Msa1126240:CDS
ATCAAAGCAAGCTCCGGTAT+CGG 0.481784 7_3:-77755293 Msa1126240:CDS
GTTCTTTCACCACCTTAAGA+AGG 0.483351 7_3:+77753332 None:intergenic
CAAGAAGCTTGGGAGAGAAC+TGG 0.488096 7_3:-77753371 Msa1126240:CDS
GGAAGTTAAAACAAAAGATA+GGG 0.490127 7_3:-77755182 Msa1126240:CDS
CTATCTCTGGAAGAGCTTCA+AGG 0.490263 7_3:-77752748 Msa1126240:CDS
AGTATGCAGAGCTGATATAA+GGG 0.490595 7_3:+77753603 None:intergenic
TGATGATTCCTGGTAAAATA+CGG 0.490936 7_3:-77755528 Msa1126240:CDS
TGGAGGGTGAGAGAGTTTGA+TGG 0.492156 7_3:+77755753 None:intergenic
TTGTAGAGAATGGATCGATC+TGG 0.497428 7_3:-77754792 Msa1126240:intron
AAAGGTAGGAGGTCTATCTC+TGG 0.501270 7_3:-77752761 Msa1126240:CDS
ACTCAGGAGATGGAATAGAC+TGG 0.502001 7_3:-77752652 Msa1126240:CDS
GAAAGCTTGAACAAGAAGCT+TGG 0.502670 7_3:-77753382 Msa1126240:CDS
TTCTTCGTCGTTCAAGTGCG+TGG 0.507442 7_3:+77753006 None:intergenic
TTTGGAGCTTCTCATCACCT+TGG 0.507910 7_3:+77752675 None:intergenic
ACTGAAGATAAAGAAGATGA+TGG 0.515684 7_3:-77752941 Msa1126240:CDS
ACTCCCACGGTAGATGAAGC+AGG 0.518052 7_3:+77753733 None:intergenic
CACCCTCCAATCACGCTCAT+CGG 0.520058 7_3:-77755739 Msa1126240:five_prime_UTR
ATCAGCTCTGCATACTGAGC+TGG 0.520095 7_3:-77753596 Msa1126240:CDS
CCAAGCAAATACCCCTTGCT+AGG 0.520997 7_3:-77752303 Msa1126240:three_prime_UTR
TTCTTTCACCACCTTAAGAA+GGG 0.523005 7_3:+77753333 None:intergenic
TTGATGTAGAGCGGAAGCTA+AGG 0.527027 7_3:-77753414 Msa1126240:CDS
TTAAAGGATCAAATACTAGC+TGG 0.529312 7_3:-77752545 Msa1126240:CDS
GCTATTCTTGTAGGTAAAAG+AGG 0.529624 7_3:-77755436 Msa1126240:CDS
CTCAGGAGATGGAATAGACT+GGG 0.532350 7_3:-77752651 Msa1126240:CDS
GACGGCGGCGGTGGATATCT+CGG 0.532828 7_3:+77755331 None:intergenic
CTCCCCGATTGCGACGGCGG+CGG 0.533125 7_3:+77755319 None:intergenic
ATAAGGGACATACTAGAAGA+AGG 0.533927 7_3:+77753619 None:intergenic
TTACTCCCCGATTGCGACGG+CGG 0.535219 7_3:+77755316 None:intergenic
AGAGAGACATGCTACAATGC+AGG 0.537155 7_3:-77752432 Msa1126240:CDS
ATGGTTGGATGAAATGGAGT+TGG 0.538947 7_3:+77755710 None:intergenic
GTATCAAATCTGCTTTCAGA+AGG 0.539038 7_3:+77752812 None:intergenic
CACCGCCGCCGTCGCAATCG+GGG 0.541732 7_3:-77755321 Msa1126240:CDS
AGTATCCGCATCGCCGACGC+TGG 0.544419 7_3:+77755361 None:intergenic
TAACAGCTTCCACGTAGGTA+CGG 0.544482 7_3:+77755396 None:intergenic
ATCAAGGTTAGGGGAAGCCA+GGG 0.544554 7_3:-77752396 Msa1126240:CDS
ATATCAGATGGAGTGGAATG+GGG 0.544741 7_3:-77752701 Msa1126240:CDS
ACCTTTCGAAGATCCAAGCC+TGG 0.545894 7_3:+77752520 None:intergenic
AAGCTCCAAAACTCAGGAGA+TGG 0.545906 7_3:-77752662 Msa1126240:CDS
ACAGGAGAAAAGGAAAGGAA+GGG 0.545959 7_3:+77752111 None:intergenic
CGCGTTTGAATCTGTAGTTG+TGG 0.547592 7_3:+77755458 None:intergenic
TAAATTATGAGCCTCACCCC+TGG 0.548141 7_3:+77752379 None:intergenic
TCCAGGCTTGGATCTTCGAA+AGG 0.552565 7_3:-77752521 Msa1126240:CDS
ATGGGATCTCGTGAAGGCCA+AGG 0.553657 7_3:+77752467 None:intergenic
TTAAAATTATAAACCGCATG+TGG 0.555129 7_3:-77753657 Msa1126240:CDS
TCACGAGGTAGAGAAAGAAA+AGG 0.555289 7_3:-77753191 Msa1126240:CDS
ATGCTGCTGTTGATATGCTC+AGG 0.556277 7_3:-77753084 Msa1126240:CDS
GATTTACTCCCCGATTGCGA+CGG 0.557094 7_3:+77755313 None:intergenic
GAGTAAATCAAAGCAAGCTC+CGG 0.558371 7_3:-77755299 Msa1126240:CDS
TAAAATTATAAACCGCATGT+GGG 0.559331 7_3:-77753656 Msa1126240:CDS
AACAGCTTCCACGTAGGTAC+GGG 0.561157 7_3:+77755397 None:intergenic
GTTAGGGGAAGCCAGGGGTG+AGG 0.562101 7_3:-77752390 Msa1126240:CDS
GTATATCAGATGGAGTGGAA+TGG 0.562653 7_3:-77752703 Msa1126240:CDS
GCGGAAGCTAAGGAGACGGT+TGG 0.563922 7_3:-77753404 Msa1126240:CDS
AATCCGATGAGCGTGATTGG+AGG 0.566154 7_3:+77755736 None:intergenic
GTAGAGTGTCAAGAGGAATC+CGG 0.568280 7_3:-77752902 Msa1126240:CDS
CAAAGCTATAAATCAGTGAA+AGG 0.569862 7_3:-77752569 Msa1126240:CDS
TCACGCATTTCCTTAACACT+AGG 0.573536 7_3:+77755223 None:intergenic
GATGAGAAGCTCCAAAACTC+AGG 0.575179 7_3:-77752668 Msa1126240:CDS
CTCTGCATACTGAGCTGGAG+AGG 0.576008 7_3:-77753591 Msa1126240:CDS
CGTGGCGGAATATGGATGGT+TGG 0.576505 7_3:+77755695 None:intergenic
CTTGTAGGTAAAAGAGGAGG+CGG 0.576824 7_3:-77755430 Msa1126240:CDS
ATCCGATGAGCGTGATTGGA+GGG 0.577775 7_3:+77755737 None:intergenic
TATTTAACTCTATAGAATGC+AGG 0.578793 7_3:+77752870 None:intergenic
AAATCTGCTTTCAGAAGGGT+AGG 0.578866 7_3:+77752817 None:intergenic
GGATAAGCTGATTAACCTGT+AGG 0.578986 7_3:+77753563 None:intergenic
CTCGACCTGTGTGAATTGCT+CGG 0.579001 7_3:+77754744 None:intergenic
TTCACATAGTCCTCCATCAG+AGG 0.582500 7_3:-77755104 Msa1126240:intron
GGTTGGATGAAATGGAGTTG+GGG 0.584923 7_3:+77755712 None:intergenic
CGAGCAATTCACACAGGTCG+AGG 0.587010 7_3:-77754743 Msa1126240:CDS
GAGGAGTATATCAGATGGAG+TGG 0.588143 7_3:-77752708 Msa1126240:CDS
TCTGCATACTGAGCTGGAGA+GGG 0.588803 7_3:-77753590 Msa1126240:CDS
TAGTAATGCCAGTGTTATGG+AGG 0.589807 7_3:-77754679 Msa1126240:intron
CTCCCACGGTAGATGAAGCA+GGG 0.590806 7_3:+77753734 None:intergenic
AGATAAAGAAGATGATGGAG+AGG 0.590807 7_3:-77752936 Msa1126240:CDS
TAAGGGACATACTAGAAGAA+GGG 0.595038 7_3:+77753620 None:intergenic
CTGCAGAGGAGTATATCAGA+TGG 0.596087 7_3:-77752713 Msa1126240:CDS
AATCCGAGATAGATAAACAA+AGG 0.602124 7_3:-77753234 Msa1126240:CDS
ACCGATTAAAGGACATTGCA+AGG 0.602272 7_3:+77752035 None:intergenic
GAGAGACATGCTACAATGCA+GGG 0.603310 7_3:-77752431 Msa1126240:CDS
CAAACGTGGTTTAACTCCCA+CGG 0.603600 7_3:+77753720 None:intergenic
AAGATAGGGTTTCAACTGCT+AGG 0.604487 7_3:-77755168 Msa1126240:CDS
GTTAGCAAGAGATGTTGATG+AGG 0.606982 7_3:-77753260 Msa1126240:CDS
TATCAAATCTGCTTTCAGAA+GGG 0.612920 7_3:+77752813 None:intergenic
AGGGTGAGAGAGTTTGATGG+TGG 0.613777 7_3:+77755756 None:intergenic
GATCTCCAGCGTCGGCGATG+CGG 0.614483 7_3:-77755366 Msa1126240:CDS
ACCCCTGCTTCATCTACCGT+GGG 0.614755 7_3:-77753736 Msa1126240:CDS
GGTCTTCATGACCCCACATG+CGG 0.614966 7_3:+77753644 None:intergenic
CTATTTATGGGATCTCGTGA+AGG 0.615326 7_3:+77752461 None:intergenic
GTAGTTGTGGTTAATTACTG+AGG 0.615769 7_3:+77755471 None:intergenic
AGGAAGAAATAAAAGGTAGG+AGG 0.617173 7_3:-77752772 Msa1126240:CDS
TATCAGATGGAGTGGAATGG+GGG 0.623899 7_3:-77752700 Msa1126240:CDS
CGAAGCAAAATATCAACATG+AGG 0.624711 7_3:-77753113 Msa1126240:CDS
TCGAGGAAGAAATAAAAGGT+AGG 0.625388 7_3:-77752775 Msa1126240:CDS
GAAAGCATCCCTTCTTAAGG+TGG 0.630764 7_3:-77753341 Msa1126240:CDS
TGTGAAGGATCAGACAAATG+AGG 0.633486 7_3:+77755121 None:intergenic
GAACTGGAGAAACAAGCTCA+AGG 0.637215 7_3:-77752617 Msa1126240:CDS
ATATTACAGGAGAAAAGGAA+AGG 0.637498 7_3:+77752106 None:intergenic
CAATGGTGTAGAGTGTCAAG+AGG 0.641360 7_3:-77752909 Msa1126240:CDS
GACCCCTGCTTCATCTACCG+TGG 0.641700 7_3:-77753737 Msa1126240:CDS
AAGAATCCAAAGGACCAACA+TGG 0.642047 7_3:+77754703 None:intergenic
TCTGATGGAGGACTATGTGA+AGG 0.643240 7_3:+77755106 None:intergenic
GGATAAGCACATCTCTGCAG+AGG 0.643419 7_3:-77752727 Msa1126240:CDS
TACAAGAAAATATCCAATCG+AGG 0.645942 7_3:-77752792 Msa1126240:CDS
AAGCTCGCGATCTCCAGCGT+CGG 0.647327 7_3:-77755374 Msa1126240:CDS
ATGAGATACCTCCATAACAC+TGG 0.648763 7_3:+77754671 None:intergenic
GTTGGATGAAATGGAGTTGG+GGG 0.652211 7_3:+77755713 None:intergenic
ATTTCCTTAACACTAGGCGA+AGG 0.652929 7_3:+77755229 None:intergenic
ATTACGTGGCGGAATATGGA+TGG 0.653380 7_3:+77755691 None:intergenic
CAGGAGAACTTGATGTAGAG+CGG 0.654347 7_3:-77753423 Msa1126240:CDS
CCTGGTAAAATACGGAAACG+AGG 0.654966 7_3:-77755520 Msa1126240:CDS
AAAGGCTTCTTGGAAAACCA+AGG 0.655680 7_3:-77753482 Msa1126240:CDS
CCACTACACCCGTACCTACG+TGG 0.656484 7_3:-77755405 Msa1126240:CDS
AAAATTATAAACCGCATGTG+GGG 0.658914 7_3:-77753655 Msa1126240:CDS
ACAGAACAACATCACCATGT+TGG 0.658995 7_3:-77754717 Msa1126240:CDS
TAGAGCGGAAGCTAAGGAGA+CGG 0.666989 7_3:-77753408 Msa1126240:CDS
TTACTGACATCTTTCAAACG+TGG 0.669903 7_3:+77753706 None:intergenic
TCCCACGGTAGATGAAGCAG+GGG 0.671790 7_3:+77753735 None:intergenic
GTCTGTGAGTGATTACGTGG+CGG 0.678287 7_3:+77755680 None:intergenic
GTTAACCGATATGTTACGCG+AGG 0.681573 7_3:-77753158 Msa1126240:CDS
CAAGGAGCGAGAAATTGTTG+AGG 0.687082 7_3:-77753464 Msa1126240:CDS
GAAGGATCAGACAAATGAGG+AGG 0.689178 7_3:+77755124 None:intergenic
GATGATGGAGAGGTTGACAA+TGG 0.693762 7_3:-77752926 Msa1126240:CDS
AGAGTCTGTGAGTGATTACG+TGG 0.698453 7_3:+77755677 None:intergenic
GTCAACAAAAGCTTGTCACG+AGG 0.701503 7_3:-77753206 Msa1126240:CDS
GAACACCGAGCAATTCACAC+AGG 0.703603 7_3:-77754749 Msa1126240:CDS
GCATTACTAAAAGAATCCAA+AGG 0.704154 7_3:+77754693 None:intergenic
GGGACATACTAGAAGAAGGG+CGG 0.712124 7_3:+77753623 None:intergenic
ATTCTTGTAGGTAAAAGAGG+AGG 0.712348 7_3:-77755433 Msa1126240:CDS
TCAAGGTTAGGGGAAGCCAG+GGG 0.732433 7_3:-77752395 Msa1126240:CDS
GGTATCGGCGAGAAAACTAG+CGG 0.739507 7_3:-77755278 Msa1126240:CDS
GAGCTTAACAGCTTCCACGT+AGG 0.748381 7_3:+77755391 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTATACATTATTTTGAA+TGG - chr7_3:77753911-77753930 Msa1126240:intron 10.0%
!! AAACACTGATAAATTATTAT+TGG + chr7_3:77753427-77753446 None:intergenic 15.0%
!!! AAAATAAAATCTTTTAACAC+TGG - chr7_3:77755493-77755512 Msa1126240:CDS 15.0%
!! TAATTAATTCACAACACAAT+AGG + chr7_3:77752816-77752835 None:intergenic 20.0%
!!! TTTTGTACTATTGCATAATT+TGG - chr7_3:77752950-77752969 Msa1126240:CDS 20.0%
!! TTGTTTATTATTGTAGAGAA+TGG - chr7_3:77753025-77753044 Msa1126240:CDS 20.0%
!!! TTCCATGTAGAATTTTTTAT+TGG - chr7_3:77753313-77753332 Msa1126240:CDS 20.0%
!! AATACAAGATTTACTGAAAA+AGG - chr7_3:77753828-77753847 Msa1126240:intron 20.0%
!! AAATTATCAAAGAGTTAAGA+GGG + chr7_3:77753985-77754004 None:intergenic 20.0%
!! TAAATTATCAAAGAGTTAAG+AGG + chr7_3:77753986-77754005 None:intergenic 20.0%
!! ATTTAATAAGGAAGTCTAAA+AGG - chr7_3:77755466-77755485 Msa1126240:CDS 20.0%
!! CAAAATCTAAAAACTTGAAA+TGG + chr7_3:77755572-77755591 None:intergenic 20.0%
!! CTTTGTGTTGATGAATTAAT+TGG + chr7_3:77752201-77752220 None:intergenic 25.0%
! AACAAAATCAACTACAACAA+TGG - chr7_3:77752273-77752292 Msa1126240:three_prime_UTR 25.0%
! AGGAAGTTAAAACAAAAGAT+AGG - chr7_3:77752644-77752663 Msa1126240:CDS 25.0%
! GGAAGTTAAAACAAAAGATA+GGG - chr7_3:77752645-77752664 Msa1126240:CDS 25.0%
! TACTATTGCATAATTTGGTT+TGG - chr7_3:77752955-77752974 Msa1126240:CDS 25.0%
!! AATCATCCACATTTTCAAAA+CGG + chr7_3:77753202-77753221 None:intergenic 25.0%
!! TGATTTTGTCTATTTGTTCA+TGG - chr7_3:77753217-77753236 Msa1126240:CDS 25.0%
!! GATTTTGTCTATTTGTTCAT+GGG - chr7_3:77753218-77753237 Msa1126240:CDS 25.0%
! ACTTACATATGTAACTTAGT+AGG - chr7_3:77753249-77753268 Msa1126240:CDS 25.0%
! CTCCAATAAAAAATTCTACA+TGG + chr7_3:77753318-77753337 None:intergenic 25.0%
!!! AGAAAAACACAATTTTGACT+CGG - chr7_3:77753458-77753477 Msa1126240:CDS 25.0%
!!! TTAGGTCATTGTTTTATAGA+TGG - chr7_3:77753637-77753656 Msa1126240:CDS 25.0%
! AGATGGATAAATAGAATAGA+TGG - chr7_3:77753654-77753673 Msa1126240:CDS 25.0%
! ACAAATACAATGAATAGCAA+GGG + chr7_3:77753720-77753739 None:intergenic 25.0%
! TACAAATACAATGAATAGCA+AGG + chr7_3:77753721-77753740 None:intergenic 25.0%
!!! TGCACATCATATGTTATTTT+TGG + chr7_3:77754015-77754034 None:intergenic 25.0%
! TTAAAATTATAAACCGCATG+TGG - chr7_3:77754170-77754189 Msa1126240:intron 25.0%
! TAAAATTATAAACCGCATGT+GGG - chr7_3:77754171-77754190 Msa1126240:intron 25.0%
! TTCTTTATCTTCAGTATGAT+GGG + chr7_3:77754881-77754900 None:intergenic 25.0%
! TATTTAACTCTATAGAATGC+AGG + chr7_3:77754960-77754979 None:intergenic 25.0%
! GCATTCTATAGAGTTAAATA+TGG - chr7_3:77754960-77754979 Msa1126240:intron 25.0%
! TAAATCAGTGAAAGGATTAA+AGG - chr7_3:77755266-77755285 Msa1126240:CDS 25.0%
! ACATGTGTTATAAGTATAAC+CGG - chr7_3:77755673-77755692 Msa1126240:five_prime_UTR 25.0%
GTGCTAGATTTGATGAAAAA+AGG + chr7_3:77752179-77752198 None:intergenic 30.0%
TGATGATTCCTGGTAAAATA+CGG - chr7_3:77752299-77752318 Msa1126240:three_prime_UTR 30.0%
TGATCACGTGAAAATGAAAA+AGG - chr7_3:77752624-77752643 Msa1126240:CDS 30.0%
AACAAAAATGAAACCTCTGA+TGG + chr7_3:77752739-77752758 None:intergenic 30.0%
TAATTTCTGTTCTGTCATTG+TGG - chr7_3:77752789-77752808 Msa1126240:CDS 30.0%
! TGCTTGTAACTTGTAAATGA+AGG + chr7_3:77752911-77752930 None:intergenic 30.0%
GCATTACTAAAAGAATCCAA+AGG + chr7_3:77753137-77753156 None:intergenic 30.0%
! TTTTAGTAATGCCAGTGTTA+TGG - chr7_3:77753145-77753164 Msa1126240:CDS 30.0%
! TAGGAACTTGATTTTCTCAT+TGG - chr7_3:77753268-77753287 Msa1126240:CDS 30.0%
! AGGAACTTGATTTTCTCATT+GGG - chr7_3:77753269-77753288 Msa1126240:CDS 30.0%
AAAACCCATGTAAAAATCAG+CGG - chr7_3:77753553-77753572 Msa1126240:CDS 30.0%
AAATGAAACAATCGTTGAGT+TGG - chr7_3:77753579-77753598 Msa1126240:CDS 30.0%
GATACGAATAGAGAACAAAT+TGG + chr7_3:77753864-77753883 None:intergenic 30.0%
AAAATTATAAACCGCATGTG+GGG - chr7_3:77754172-77754191 Msa1126240:intron 30.0%
AATCCGAGATAGATAAACAA+AGG - chr7_3:77754593-77754612 Msa1126240:intron 30.0%
! TCTCCTTTGTTTATCTATCT+CGG + chr7_3:77754599-77754618 None:intergenic 30.0%
! CTCATGTTGATATTTTGCTT+CGG + chr7_3:77754716-77754735 None:intergenic 30.0%
AGCAAACAAGTAAGAGAAAA+GGG - chr7_3:77754790-77754809 Msa1126240:intron 30.0%
CTTCTTTATCTTCAGTATGA+TGG + chr7_3:77754882-77754901 None:intergenic 30.0%
ACTGAAGATAAAGAAGATGA+TGG - chr7_3:77754886-77754905 Msa1126240:intron 30.0%
GCAACAACAAAAACTATAAG+TGG - chr7_3:77754986-77755005 Msa1126240:intron 30.0%
TATCAAATCTGCTTTCAGAA+GGG + chr7_3:77755017-77755036 None:intergenic 30.0%
TACAAGAAAATATCCAATCG+AGG - chr7_3:77755035-77755054 Msa1126240:intron 30.0%
CAAAGCTATAAATCAGTGAA+AGG - chr7_3:77755258-77755277 Msa1126240:CDS 30.0%
TTAAAGGATCAAATACTAGC+TGG - chr7_3:77755282-77755301 Msa1126240:CDS 30.0%
AATGGTCAAAAATCAAGGTT+AGG - chr7_3:77755420-77755439 Msa1126240:CDS 30.0%
ATGGTCAAAAATCAAGGTTA+GGG - chr7_3:77755421-77755440 Msa1126240:CDS 30.0%
GTGAGGCTCATAATTTAATA+AGG - chr7_3:77755454-77755473 Msa1126240:CDS 30.0%
! AAATGGAGAAAAGCTTCTTT+TGG + chr7_3:77755555-77755574 None:intergenic 30.0%
TTGACCAATATGAGTAAGTA+TGG - chr7_3:77755630-77755649 Msa1126240:five_prime_UTR 30.0%
AAGACCATACTTACTCATAT+TGG + chr7_3:77755637-77755656 None:intergenic 30.0%
AGAAAGAAAAAAAAACTCGC+CGG + chr7_3:77755695-77755714 None:intergenic 30.0%
ATATTACAGGAGAAAAGGAA+AGG + chr7_3:77755724-77755743 None:intergenic 30.0%
AGCATATATTACAGGAGAAA+AGG + chr7_3:77755729-77755748 None:intergenic 30.0%
ATATGGATGGTTGGATGAAA+TGG + chr7_3:77752126-77752145 None:intergenic 35.0%
GTAGTTGTGGTTAATTACTG+AGG + chr7_3:77752359-77752378 None:intergenic 35.0%
GCTATTCTTGTAGGTAAAAG+AGG - chr7_3:77752391-77752410 Msa1126240:CDS 35.0%
ATTCTTGTAGGTAAAAGAGG+AGG - chr7_3:77752394-77752413 Msa1126240:CDS 35.0%
AAAAATGAAACCTCTGATGG+AGG + chr7_3:77752736-77752755 None:intergenic 35.0%
!!! TTGTGTCCGTTTTGAAAATG+TGG - chr7_3:77753193-77753212 Msa1126240:CDS 35.0%
GTCTATTTGTTCATGGGAAT+AGG - chr7_3:77753224-77753243 Msa1126240:CDS 35.0%
! GGAACTTGATTTTCTCATTG+GGG - chr7_3:77753270-77753289 Msa1126240:CDS 35.0%
TGATGCAATGAAGTGAGAAA+TGG + chr7_3:77753393-77753412 None:intergenic 35.0%
CTCACTTCATTGCATCAAAT+AGG - chr7_3:77753396-77753415 Msa1126240:CDS 35.0%
ACTTCATTGCATCAAATAGG+TGG - chr7_3:77753399-77753418 Msa1126240:CDS 35.0%
!!! TCTTCCGCTGATTTTTACAT+GGG + chr7_3:77753560-77753579 None:intergenic 35.0%
!!! TTCTTCCGCTGATTTTTACA+TGG + chr7_3:77753561-77753580 None:intergenic 35.0%
GTTCTCTATTCGTATCAGAA+TGG - chr7_3:77753868-77753887 Msa1126240:intron 35.0%
TTACTGACATCTTTCAAACG+TGG + chr7_3:77754124-77754143 None:intergenic 35.0%
TAAGGGACATACTAGAAGAA+GGG + chr7_3:77754210-77754229 None:intergenic 35.0%
ATAAGGGACATACTAGAAGA+AGG + chr7_3:77754211-77754230 None:intergenic 35.0%
AGTATGCAGAGCTGATATAA+GGG + chr7_3:77754227-77754246 None:intergenic 35.0%
! TTTCCAAGAAGCCTTTTCTT+CGG + chr7_3:77754341-77754360 None:intergenic 35.0%
AAAGCTTGAACAAGAAGCTT+GGG - chr7_3:77754446-77754465 Msa1126240:intron 35.0%
TTCTTTCACCACCTTAAGAA+GGG + chr7_3:77754497-77754516 None:intergenic 35.0%
CGAAGCAAAATATCAACATG+AGG - chr7_3:77754714-77754733 Msa1126240:CDS 35.0%
! AATCAGCTTGAAGCTTTTCT+AGG - chr7_3:77754766-77754785 Msa1126240:CDS 35.0%
CAGCAAACAAGTAAGAGAAA+AGG - chr7_3:77754789-77754808 Msa1126240:CDS 35.0%
!! AGATAAAGAAGATGATGGAG+AGG - chr7_3:77754891-77754910 Msa1126240:intron 35.0%
GTATCAAATCTGCTTTCAGA+AGG + chr7_3:77755018-77755037 None:intergenic 35.0%
!! CCTTTTATTTCTTCCTCGAT+TGG + chr7_3:77755051-77755070 None:intergenic 35.0%
CCAATCGAGGAAGAAATAAA+AGG - chr7_3:77755048-77755067 Msa1126240:intron 35.0%
TCGAGGAAGAAATAAAAGGT+AGG - chr7_3:77755052-77755071 Msa1126240:intron 35.0%
AGGAAGAAATAAAAGGTAGG+AGG - chr7_3:77755055-77755074 Msa1126240:intron 35.0%
TATATCAGATGGAGTGGAAT+GGG - chr7_3:77755125-77755144 Msa1126240:CDS 35.0%
CAAGCTCAAGGAAAAAGTTA+CGG - chr7_3:77755222-77755241 Msa1126240:CDS 35.0%
GGTTGTGAAAATTGTCTAGT+TGG + chr7_3:77755342-77755361 None:intergenic 35.0%
! CTAGACAATTTTCACAACCT+TGG - chr7_3:77755343-77755362 Msa1126240:CDS 35.0%
CTCTCTTGGAAGCTATTTAT+GGG + chr7_3:77755381-77755400 None:intergenic 35.0%
TCTCTCTTGGAAGCTATTTA+TGG + chr7_3:77755382-77755401 None:intergenic 35.0%
AGGGAAATGGTCAAAAATCA+AGG - chr7_3:77755415-77755434 Msa1126240:CDS 35.0%
TGGTCAAAAATCAAGGTTAG+GGG - chr7_3:77755422-77755441 Msa1126240:CDS 35.0%
TCAACGTCAGCATATATTAC+AGG + chr7_3:77755737-77755756 None:intergenic 35.0%
! TGACGTTGACTAAGAAAACT+TGG - chr7_3:77755748-77755767 Msa1126240:five_prime_UTR 35.0%
GAATCAAACCAACCGATTAA+AGG + chr7_3:77755806-77755825 None:intergenic 35.0%
TGGTTGGATGAAATGGAGTT+GGG + chr7_3:77752119-77752138 None:intergenic 40.0%
ATGGTTGGATGAAATGGAGT+TGG + chr7_3:77752120-77752139 None:intergenic 40.0%
ACAATGGACATGATGATTCC+TGG - chr7_3:77752289-77752308 Msa1126240:three_prime_UTR 40.0%
TTCAAACGCGCTATTCTTGT+AGG - chr7_3:77752382-77752401 Msa1126240:CDS 40.0%
GAGTAAATCAAAGCAAGCTC+CGG - chr7_3:77752528-77752547 Msa1126240:CDS 40.0%
ATTTCCTTAACACTAGGCGA+AGG + chr7_3:77752601-77752620 None:intergenic 40.0%
TCACGCATTTCCTTAACACT+AGG + chr7_3:77752607-77752626 None:intergenic 40.0%
AAGATAGGGTTTCAACTGCT+AGG - chr7_3:77752659-77752678 Msa1126240:CDS 40.0%
TGTGAAGGATCAGACAAATG+AGG + chr7_3:77752709-77752728 None:intergenic 40.0%
TTGTAGAGAATGGATCGATC+TGG - chr7_3:77753035-77753054 Msa1126240:CDS 40.0%
! AGAATGGATCGATCTGGAAT+TGG - chr7_3:77753041-77753060 Msa1126240:CDS 40.0%
ACAGAACAACATCACCATGT+TGG - chr7_3:77753110-77753129 Msa1126240:CDS 40.0%
AAGAATCCAAAGGACCAACA+TGG + chr7_3:77753127-77753146 None:intergenic 40.0%
TAGTAATGCCAGTGTTATGG+AGG - chr7_3:77753148-77753167 Msa1126240:CDS 40.0%
ATGAGATACCTCCATAACAC+TGG + chr7_3:77753159-77753178 None:intergenic 40.0%
GTTTGACCTGTGTTCACTTT+AGG - chr7_3:77753619-77753638 Msa1126240:CDS 40.0%
CAATGACCTAAAGTGAACAC+AGG + chr7_3:77753628-77753647 None:intergenic 40.0%
CGCATCTACTAGAATTTCGA+TGG - chr7_3:77753742-77753761 Msa1126240:CDS 40.0%
CATGTCTTATAGTAGCGTCT+TGG - chr7_3:77754033-77754052 Msa1126240:intron 40.0%
CAGTATGCAGAGCTGATATA+AGG + chr7_3:77754228-77754247 None:intergenic 40.0%
GGATAAGCTGATTAACCTGT+AGG + chr7_3:77754267-77754286 None:intergenic 40.0%
!! GAAGTGTTTTGCCGAAGAAA+AGG - chr7_3:77754327-77754346 Msa1126240:intron 40.0%
AAAGGCTTCTTGGAAAACCA+AGG - chr7_3:77754345-77754364 Msa1126240:intron 40.0%
GAAAGCTTGAACAAGAAGCT+TGG - chr7_3:77754445-77754464 Msa1126240:intron 40.0%
GTTCTTTCACCACCTTAAGA+AGG + chr7_3:77754498-77754517 None:intergenic 40.0%
GTTAGCAAGAGATGTTGATG+AGG - chr7_3:77754567-77754586 Msa1126240:intron 40.0%
TCACGAGGTAGAGAAAGAAA+AGG - chr7_3:77754636-77754655 Msa1126240:intron 40.0%
AAATCTGCTTTCAGAAGGGT+AGG + chr7_3:77755013-77755032 None:intergenic 40.0%
GTATATCAGATGGAGTGGAA+TGG - chr7_3:77755124-77755143 Msa1126240:CDS 40.0%
ATATCAGATGGAGTGGAATG+GGG - chr7_3:77755126-77755145 Msa1126240:CDS 40.0%
! CTATTCCATCTCCTGAGTTT+TGG + chr7_3:77755173-77755192 None:intergenic 40.0%
! CTGGGAAAGCTTTTATGAAC+TGG - chr7_3:77755194-77755213 Msa1126240:CDS 40.0%
! ATCAAATACTAGCTGGTTCC+AGG - chr7_3:77755289-77755308 Msa1126240:CDS 40.0%
CTATTTATGGGATCTCGTGA+AGG + chr7_3:77755369-77755388 None:intergenic 40.0%
!!! TTTTGGTTTCTCCTAGCAAG+GGG + chr7_3:77755538-77755557 None:intergenic 40.0%
!!! CTTTTGGTTTCTCCTAGCAA+GGG + chr7_3:77755539-77755558 None:intergenic 40.0%
!!! TCTTTTGGTTTCTCCTAGCA+AGG + chr7_3:77755540-77755559 None:intergenic 40.0%
ACAGGAGAAAAGGAAAGGAA+GGG + chr7_3:77755719-77755738 None:intergenic 40.0%
TACAGGAGAAAAGGAAAGGA+AGG + chr7_3:77755720-77755739 None:intergenic 40.0%
GCCTTGCAATGTCCTTTAAT+CGG - chr7_3:77755791-77755810 Msa1126240:five_prime_UTR 40.0%
ACCGATTAAAGGACATTGCA+AGG + chr7_3:77755795-77755814 None:intergenic 40.0%
TGCAATGTCCTTTAATCGGT+TGG - chr7_3:77755795-77755814 Msa1126240:five_prime_UTR 40.0%
GTTGGATGAAATGGAGTTGG+GGG + chr7_3:77752117-77752136 None:intergenic 45.0%
GGTTGGATGAAATGGAGTTG+GGG + chr7_3:77752118-77752137 None:intergenic 45.0%
! ATTACGTGGCGGAATATGGA+TGG + chr7_3:77752139-77752158 None:intergenic 45.0%
! AGTGATTACGTGGCGGAATA+TGG + chr7_3:77752143-77752162 None:intergenic 45.0%
AGAGTCTGTGAGTGATTACG+TGG + chr7_3:77752153-77752172 None:intergenic 45.0%
! CCTCGTTTCCGTATTTTACC+AGG + chr7_3:77752310-77752329 None:intergenic 45.0%
CCTGGTAAAATACGGAAACG+AGG - chr7_3:77752307-77752326 Msa1126240:three_prime_UTR 45.0%
CGCGTTTGAATCTGTAGTTG+TGG + chr7_3:77752372-77752391 None:intergenic 45.0%
CTTGTAGGTAAAAGAGGAGG+CGG - chr7_3:77752397-77752416 Msa1126240:CDS 45.0%
TAACAGCTTCCACGTAGGTA+CGG + chr7_3:77752434-77752453 None:intergenic 45.0%
ATCAAAGCAAGCTCCGGTAT+CGG - chr7_3:77752534-77752553 Msa1126240:CDS 45.0%
GATTCCTTCGCCTAGTGTTA+AGG - chr7_3:77752594-77752613 Msa1126240:CDS 45.0%
ACTGCTAGGTCTATTCGTTC+TGG - chr7_3:77752673-77752692 Msa1126240:CDS 45.0%
GAAGGATCAGACAAATGAGG+AGG + chr7_3:77752706-77752725 None:intergenic 45.0%
TCTGATGGAGGACTATGTGA+AGG + chr7_3:77752724-77752743 None:intergenic 45.0%
TTCACATAGTCCTCCATCAG+AGG - chr7_3:77752723-77752742 Msa1126240:CDS 45.0%
TTCCAGACTGACACATGATC+TGG + chr7_3:77752883-77752902 None:intergenic 45.0%
ACATCACCATGTTGGTCCTT+TGG - chr7_3:77753118-77753137 Msa1126240:CDS 45.0%
! TGACTCGGCAAGAACATGAA+AGG - chr7_3:77753473-77753492 Msa1126240:CDS 45.0%
!! TGTTTTGTTGCCAACTGCCA+TGG - chr7_3:77753680-77753699 Msa1126240:CDS 45.0%
TCAACAATGACCATGGCAGT+TGG + chr7_3:77753693-77753712 None:intergenic 45.0%
GGGCATATCAACAATGACCA+TGG + chr7_3:77753700-77753719 None:intergenic 45.0%
CAAACGTGGTTTAACTCCCA+CGG + chr7_3:77754110-77754129 None:intergenic 45.0%
TCTGATCTGAACGTTGTTCG+TGG + chr7_3:77754288-77754307 None:intergenic 45.0%
TTGCCGAAGAAAAGGCTTCT+TGG - chr7_3:77754335-77754354 Msa1126240:intron 45.0%
CTCAACAATTTCTCGCTCCT+TGG + chr7_3:77754365-77754384 None:intergenic 45.0%
CAAGGAGCGAGAAATTGTTG+AGG - chr7_3:77754363-77754382 Msa1126240:intron 45.0%
GCTGCAATTGAATCTGTTGC+AGG - chr7_3:77754385-77754404 Msa1126240:intron 45.0%
CAGGAGAACTTGATGTAGAG+CGG - chr7_3:77754404-77754423 Msa1126240:intron 45.0%
TTGATGTAGAGCGGAAGCTA+AGG - chr7_3:77754413-77754432 Msa1126240:intron 45.0%
!! GACGAAAGCATCCCTTCTTA+AGG - chr7_3:77754483-77754502 Msa1126240:intron 45.0%
!! GAAAGCATCCCTTCTTAAGG+TGG - chr7_3:77754486-77754505 Msa1126240:intron 45.0%
GTCAACAAAAGCTTGTCACG+AGG - chr7_3:77754621-77754640 Msa1126240:intron 45.0%
GTTAACCGATATGTTACGCG+AGG - chr7_3:77754669-77754688 Msa1126240:intron 45.0%
TCTCTCCTCGCGTAACATAT+CGG + chr7_3:77754677-77754696 None:intergenic 45.0%
ATGCTGCTGTTGATATGCTC+AGG - chr7_3:77754743-77754762 Msa1126240:CDS 45.0%
!! GATGATGGAGAGGTTGACAA+TGG - chr7_3:77754901-77754920 Msa1126240:intron 45.0%
! CAATGGTGTAGAGTGTCAAG+AGG - chr7_3:77754918-77754937 Msa1126240:intron 45.0%
! GTAGAGTGTCAAGAGGAATC+CGG - chr7_3:77754925-77754944 Msa1126240:intron 45.0%
! AGAATGCAGGTCACTTTCAC+CGG + chr7_3:77754947-77754966 None:intergenic 45.0%
AAAGGTAGGAGGTCTATCTC+TGG - chr7_3:77755066-77755085 Msa1126240:intron 45.0%
! CTATCTCTGGAAGAGCTTCA+AGG - chr7_3:77755079-77755098 Msa1126240:intron 45.0%
! CTGCAGAGGAGTATATCAGA+TGG - chr7_3:77755114-77755133 Msa1126240:CDS 45.0%
! GAGGAGTATATCAGATGGAG+TGG - chr7_3:77755119-77755138 Msa1126240:CDS 45.0%
TATCAGATGGAGTGGAATGG+GGG - chr7_3:77755127-77755146 Msa1126240:CDS 45.0%
! TTTGGAGCTTCTCATCACCT+TGG + chr7_3:77755155-77755174 None:intergenic 45.0%
GATGAGAAGCTCCAAAACTC+AGG - chr7_3:77755159-77755178 Msa1126240:CDS 45.0%
AAGCTCCAAAACTCAGGAGA+TGG - chr7_3:77755165-77755184 Msa1126240:CDS 45.0%
ACTCAGGAGATGGAATAGAC+TGG - chr7_3:77755175-77755194 Msa1126240:CDS 45.0%
CTCAGGAGATGGAATAGACT+GGG - chr7_3:77755176-77755195 Msa1126240:CDS 45.0%
GAACTGGAGAAACAAGCTCA+AGG - chr7_3:77755210-77755229 Msa1126240:CDS 45.0%
GCATTGTAGCATGTCTCTCT+TGG + chr7_3:77755395-77755414 None:intergenic 45.0%
AGAGAGACATGCTACAATGC+AGG - chr7_3:77755395-77755414 Msa1126240:CDS 45.0%
GAGAGACATGCTACAATGCA+GGG - chr7_3:77755396-77755415 Msa1126240:CDS 45.0%
CATGCTACAATGCAGGGAAA+TGG - chr7_3:77755402-77755421 Msa1126240:CDS 45.0%
TAAATTATGAGCCTCACCCC+TGG + chr7_3:77755451-77755470 None:intergenic 45.0%
!! TTATTTAATATAATAAAATG+AGG - chr7_3:77752845-77752864 Msa1126240:CDS 5.0%
AGGGTGAGAGAGTTTGATGG+TGG + chr7_3:77752074-77752093 None:intergenic 50.0%
TGGAGGGTGAGAGAGTTTGA+TGG + chr7_3:77752077-77752096 None:intergenic 50.0%
ATCCGATGAGCGTGATTGGA+GGG + chr7_3:77752093-77752112 None:intergenic 50.0%
AATCCGATGAGCGTGATTGG+AGG + chr7_3:77752094-77752113 None:intergenic 50.0%
GTCTGTGAGTGATTACGTGG+CGG + chr7_3:77752150-77752169 None:intergenic 50.0%
AACAGCTTCCACGTAGGTAC+GGG + chr7_3:77752433-77752452 None:intergenic 50.0%
GAGCTTAACAGCTTCCACGT+AGG + chr7_3:77752439-77752458 None:intergenic 50.0%
GATTTACTCCCCGATTGCGA+CGG + chr7_3:77752517-77752536 None:intergenic 50.0%
!!! GCTAGTTTTCTCGCCGATAC+CGG + chr7_3:77752550-77752569 None:intergenic 50.0%
!! GGTATCGGCGAGAAAACTAG+CGG - chr7_3:77752549-77752568 Msa1126240:CDS 50.0%
AAAACTAGCGGCGACGCTTT+GGG - chr7_3:77752561-77752580 Msa1126240:CDS 50.0%
GTCCAGATCATGTGTCAGTC+TGG - chr7_3:77752878-77752897 Msa1126240:CDS 50.0%
GAACACCGAGCAATTCACAC+AGG - chr7_3:77753078-77753097 Msa1126240:CDS 50.0%
CTCGACCTGTGTGAATTGCT+CGG + chr7_3:77753086-77753105 None:intergenic 50.0%
GGGACATACTAGAAGAAGGG+CGG + chr7_3:77754207-77754226 None:intergenic 50.0%
ATCAGCTCTGCATACTGAGC+TGG - chr7_3:77754231-77754250 Msa1126240:intron 50.0%
TCTGCATACTGAGCTGGAGA+GGG - chr7_3:77754237-77754256 Msa1126240:intron 50.0%
TAGAGCGGAAGCTAAGGAGA+CGG - chr7_3:77754419-77754438 Msa1126240:intron 50.0%
CAAGAAGCTTGGGAGAGAAC+TGG - chr7_3:77754456-77754475 Msa1126240:intron 50.0%
TTCTTCGTCGTTCAAGTGCG+TGG + chr7_3:77754824-77754843 None:intergenic 50.0%
GGATAAGCACATCTCTGCAG+AGG - chr7_3:77755100-77755119 Msa1126240:intron 50.0%
! ATACTAGCTGGTTCCAGGCT+TGG - chr7_3:77755294-77755313 Msa1126240:CDS 50.0%
TCCAGGCTTGGATCTTCGAA+AGG - chr7_3:77755306-77755325 Msa1126240:CDS 50.0%
ACCTTTCGAAGATCCAAGCC+TGG + chr7_3:77755310-77755329 None:intergenic 50.0%
AATCAAGGTTAGGGGAAGCC+AGG - chr7_3:77755430-77755449 Msa1126240:CDS 50.0%
ATCAAGGTTAGGGGAAGCCA+GGG - chr7_3:77755431-77755450 Msa1126240:CDS 50.0%
!! CCTAGCAAGGGGTATTTGCT+TGG + chr7_3:77755527-77755546 None:intergenic 50.0%
CCAAGCAAATACCCCTTGCT+AGG - chr7_3:77755524-77755543 Msa1126240:CDS 50.0%
GGACATTGCAAGGCACAAAC+TGG + chr7_3:77755785-77755804 None:intergenic 50.0%
CACCCTCCAATCACGCTCAT+CGG - chr7_3:77752088-77752107 Msa1126240:three_prime_UTR 55.0%
GGGAATCCGATGAGCGTGAT+TGG + chr7_3:77752097-77752116 None:intergenic 55.0%
! CGTGGCGGAATATGGATGGT+TGG + chr7_3:77752135-77752154 None:intergenic 55.0%
GAAAACTAGCGGCGACGCTT+TGG - chr7_3:77752560-77752579 Msa1126240:CDS 55.0%
CGAGCAATTCACACAGGTCG+AGG - chr7_3:77753084-77753103 Msa1126240:CDS 55.0%
ACCCCTGCTTCATCTACCGT+GGG - chr7_3:77754091-77754110 Msa1126240:intron 55.0%
TCCCACGGTAGATGAAGCAG+GGG + chr7_3:77754095-77754114 None:intergenic 55.0%
CTCCCACGGTAGATGAAGCA+GGG + chr7_3:77754096-77754115 None:intergenic 55.0%
ACTCCCACGGTAGATGAAGC+AGG + chr7_3:77754097-77754116 None:intergenic 55.0%
GGTCTTCATGACCCCACATG+CGG + chr7_3:77754186-77754205 None:intergenic 55.0%
CTCTGCATACTGAGCTGGAG+AGG - chr7_3:77754236-77754255 Msa1126240:intron 55.0%
ATGGGATCTCGTGAAGGCCA+AGG + chr7_3:77755363-77755382 None:intergenic 55.0%
TCAAGGTTAGGGGAAGCCAG+GGG - chr7_3:77755432-77755451 Msa1126240:CDS 55.0%
CCACGTAGGTACGGGTGTAG+TGG + chr7_3:77752425-77752444 None:intergenic 60.0%
CCACTACACCCGTACCTACG+TGG - chr7_3:77752422-77752441 Msa1126240:CDS 60.0%
AAGCTCGCGATCTCCAGCGT+CGG - chr7_3:77752453-77752472 Msa1126240:CDS 60.0%
TTACTCCCCGATTGCGACGG+CGG + chr7_3:77752514-77752533 None:intergenic 60.0%
AGGGGTCTGTGCTCGAGATC+TGG + chr7_3:77754077-77754096 None:intergenic 60.0%
GACCCCTGCTTCATCTACCG+TGG - chr7_3:77754090-77754109 Msa1126240:intron 60.0%
GCGGAAGCTAAGGAGACGGT+TGG - chr7_3:77754423-77754442 Msa1126240:intron 60.0%
GGAGTGGAATGGGGGAACCA+AGG - chr7_3:77755135-77755154 Msa1126240:CDS 60.0%
!! GATCTCCAGCGTCGGCGATG+CGG - chr7_3:77752461-77752480 Msa1126240:CDS 65.0%
AGTATCCGCATCGCCGACGC+TGG + chr7_3:77752469-77752488 None:intergenic 65.0%
GACGGCGGCGGTGGATATCT+CGG + chr7_3:77752499-77752518 None:intergenic 65.0%
GTTAGGGGAAGCCAGGGGTG+AGG - chr7_3:77755437-77755456 Msa1126240:CDS 65.0%
TCCACCGCCGCCGTCGCAAT+CGG - chr7_3:77752504-77752523 Msa1126240:CDS 70.0%
GCTGGAGAGGGCTCGCCTAC+AGG - chr7_3:77754249-77754268 Msa1126240:intron 70.0%
CCACCGCCGCCGTCGCAATC+GGG - chr7_3:77752505-77752524 Msa1126240:CDS 75.0%
CACCGCCGCCGTCGCAATCG+GGG - chr7_3:77752506-77752525 Msa1126240:CDS 75.0%
CTCCCCGATTGCGACGGCGG+CGG + chr7_3:77752511-77752530 None:intergenic 75.0%
! CCCGATTGCGACGGCGGCGG+TGG + chr7_3:77752508-77752527 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 77752022 77755827 77752022 ID=Msa1126240;Name=Msa1126240
chr7_3 mRNA 77752022 77755827 77752022 ID=Msa1126240-mRNA-1;Parent=Msa1126240;Name=Msa1126240-mRNA-1;_AED=0.09;_eAED=0.09;_QI=231|1|1|1|1|1|3|336|681
chr7_3 exon 77752022 77753782 77752022 ID=Msa1126240-mRNA-1:exon:21569;Parent=Msa1126240-mRNA-1
chr7_3 exon 77754680 77754808 77754680 ID=Msa1126240-mRNA-1:exon:21568;Parent=Msa1126240-mRNA-1
chr7_3 exon 77755105 77755827 77755105 ID=Msa1126240-mRNA-1:exon:21567;Parent=Msa1126240-mRNA-1
chr7_3 five_prime_UTR 77755597 77755827 77755597 ID=Msa1126240-mRNA-1:five_prime_utr;Parent=Msa1126240-mRNA-1
chr7_3 CDS 77755105 77755596 77755105 ID=Msa1126240-mRNA-1:cds;Parent=Msa1126240-mRNA-1
chr7_3 CDS 77754680 77754808 77754680 ID=Msa1126240-mRNA-1:cds;Parent=Msa1126240-mRNA-1
chr7_3 CDS 77752358 77753782 77752358 ID=Msa1126240-mRNA-1:cds;Parent=Msa1126240-mRNA-1
chr7_3 three_prime_UTR 77752022 77752357 77752022 ID=Msa1126240-mRNA-1:three_prime_utr;Parent=Msa1126240-mRNA-1
Gene Sequence

>Msa1126240

ATGCTTAAACAAAACAGAACAACAAAATCAACTACAACAATGGACATGATGATTCCTGGTAAAATACGGAAACGAGGTTGTTCATCATCAGCATCATCATCTTCCTCAGTAATTAACCACAACTACAGATTCAAACGCGCTATTCTTGTAGGTAAAAGAGGAGGCGGATCCACTACACCCGTACCTACGTGGAAGCTGTTAAGCTCGCGATCTCCAGCGTCGGCGATGCGGATACTTCAATCACCGAGATATCCACCGCCGCCGTCGCAATCGGGGAGTAAATCAAAGCAAGCTCCGGTATCGGCGAGAAAACTAGCGGCGACGCTTTGGGAAATGAATGAGATTCCTTCGCCTAGTGTTAAGGAAATGCGTGATCACGTGAAAATGAAAAAGGAAGTTAAAACAAAAGATAGGGTTTCAACTGCTAGGTCTATTCGTTCTGGTTCTTTGCCTCCTCATTTGTCTGATCCTTCACATAGTCCTCCATCAGAGAGAATGGATCGATCTGGAATTGGTAATCGACATAGAAGAACACCGAGCAATTCACACAGGTCGAGGTTAACAGAACAACATCACCATGTTGGTCCTTTGGATTCTTTTAGTAATGCCAGTGTTATGGAGATTGAAACCAGATCTCGAGCACAGACCCCTGCTTCATCTACCGTGGGAGTTAAACCACGTTTGAAAGATGTCAGTAATGCATTGACAACATCAAAAGAGCTACTTAAAATTATAAACCGCATGTGGGGTCATGAAGACCGCCCTTCTTCTAGTATGTCCCTTATATCAGCTCTGCATACTGAGCTGGAGAGGGCTCGCCTACAGGTTAATCAGCTTATCCACGAACAACGTTCAGATCAGAATGAGATAAATTATTTGATGAAGTGTTTTGCCGAAGAAAAGGCTTCTTGGAAAACCAAGGAGCGAGAAATTGTTGAGGCTGCAATTGAATCTGTTGCAGGAGAACTTGATGTAGAGCGGAAGCTAAGGAGACGGTTGGAAAGCTTGAACAAGAAGCTTGGGAGAGAACTGGCTGAGACGAAAGCATCCCTTCTTAAGGTGGTGAAAGAACTTGAAACTGAAAAGAGAGAAAGAGAAATTATTGAAAAAGTATGTGATGAGTTAGCAAGAGATGTTGATGAGGATAAATCCGAGATAGATAAACAAAGGAGAGTGTCAACAAAAGCTTGTCACGAGGTAGAGAAAGAAAAGGAAATGATGCAGTTAACCGATATGTTACGCGAGGAGAGAGCTCAAAAGAAACTCTCCGAAGCAAAATATCAACATGAGGAAAAGAATGCTGCTGTTGATATGCTCAGGAATCAGCTTGAAGCTTTTCTAGGCAGCAAACAAGTAAGAGAAAAGGGACGTAGTTCCACGCACTTGAACGACGAAGAAATTTCTGCATATCTGAGCAGAAGCAGATTAGTCTCCCATCATACTGAAGATAAAGAAGATGATGGAGAGGTTGACAATGGTGTAGAGTGTCAAGAGGAATCCGGTGAAAGTGACCTGCATTCTATAGAGTTAAATATGGACAGCAACAACAAAAACTATAAGTGGACCTACCCTTCTGAAAGCAGATTTGATACAAGAAAATATCCAATCGAGGAAGAAATAAAAGGTAGGAGGTCTATCTCTGGAAGAGCTTCAAGGATAAGCACATCTCTGCAGAGGAGTATATCAGATGGAGTGGAATGGGGGAACCAAGGTGATGAGAAGCTCCAAAACTCAGGAGATGGAATAGACTGGGAAAGCTTTTATGAACTGGAGAAACAAGCTCAAGGAAAAAGTTACGGCGATGAAGTACAACAAAGCTATAAATCAGTGAAAGGATTAAAGGATCAAATACTAGCTGGTTCCAGGCTTGGATCTTCGAAAGGTTATGCTAGTCCAACTAGACAATTTTCACAACCTTGGCCTTCACGAGATCCCATAAATAGCTTCCAAGAGAGACATGCTACAATGCAGGGAAATGGTCAAAAATCAAGGTTAGGGGAAGCCAGGGGTGAGGCTCATAATTTAATAAGGAAGTCTAAAAGGTGA

Protein sequence

>Msa1126240

MLKQNRTTKSTTTMDMMIPGKIRKRGCSSSASSSSSVINHNYRFKRAILVGKRGGGSTTPVPTWKLLSSRSPASAMRILQSPRYPPPPSQSGSKSKQAPVSARKLAATLWEMNEIPSPSVKEMRDHVKMKKEVKTKDRVSTARSIRSGSLPPHLSDPSHSPPSERMDRSGIGNRHRRTPSNSHRSRLTEQHHHVGPLDSFSNASVMEIETRSRAQTPASSTVGVKPRLKDVSNALTTSKELLKIINRMWGHEDRPSSSMSLISALHTELERARLQVNQLIHEQRSDQNEINYLMKCFAEEKASWKTKEREIVEAAIESVAGELDVERKLRRRLESLNKKLGRELAETKASLLKVVKELETEKREREIIEKVCDELARDVDEDKSEIDKQRRVSTKACHEVEKEKEMMQLTDMLREERAQKKLSEAKYQHEEKNAAVDMLRNQLEAFLGSKQVREKGRSSTHLNDEEISAYLSRSRLVSHHTEDKEDDGEVDNGVECQEESGESDLHSIELNMDSNNKNYKWTYPSESRFDTRKYPIEEEIKGRRSISGRASRISTSLQRSISDGVEWGNQGDEKLQNSGDGIDWESFYELEKQAQGKSYGDEVQQSYKSVKGLKDQILAGSRLGSSKGYASPTRQFSQPWPSRDPINSFQERHATMQGNGQKSRLGEARGEAHNLIRKSKR*