AlfalfaGEDB | Msa1128060

M. sativa cultivar zhongmu-4 / Msa1128060

KEGG: -
GO: -
PFAM: PF01585.26

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1128060	XP_024627134.1	96.764	309	5	1	1	309	1	304	0.0	610

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1128060	sp\|A2A6A1\|GPTC8_MOUSE	37.173	191	115	2	58	247	29	215	1.49e-34	136

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1128060	Q2HRQ8	96.764	309	5	1	1	309	133	436	0.0	610

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0003890	Msa1128060	0.804853	1.769230e-49	-8.615850e-47
Msa0007440	Msa1128060	0.840151	1.033395e-57	-8.615850e-47
Msa0009430	Msa1128060	0.802869	4.571506e-49	-8.615850e-47
Msa0011170	Msa1128060	0.803230	3.849481e-49	-8.615850e-47
Msa0015610	Msa1128060	0.801176	1.018839e-48	-8.615850e-47
Msa0020930	Msa1128060	0.826923	2.078196e-54	-8.615850e-47
Msa0028660	Msa1128060	0.813870	2.056654e-51	-8.615850e-47
Msa0033110	Msa1128060	0.803376	3.590465e-49	-8.615850e-47
Msa0033260	Msa1128060	0.806911	6.534526e-50	-8.615850e-47
Msa0037540	Msa1128060	-0.825395	4.798166e-54	-8.615850e-47
Msa0037570	Msa1128060	-0.816972	4.197696e-52	-8.615850e-47
Msa0037590	Msa1128060	-0.823180	1.591453e-53	-8.615850e-47
Msa0043980	Msa1128060	0.808556	2.922220e-50	-8.615850e-47
Msa0068680	Msa1128060	0.801265	9.768050e-49	-8.615850e-47
Msa0076320	Msa1128060	0.838644	2.544532e-57	-8.615850e-47
Msa0079070	Msa1128060	0.811788	5.875658e-51	-8.615850e-47
Msa0083280	Msa1128060	0.817418	3.332333e-52	-8.615850e-47
Msa0084080	Msa1128060	0.803923	2.765250e-49	-8.615850e-47
Msa0084380	Msa1128060	0.818327	2.076646e-52	-8.615850e-47
Msa0091410	Msa1128060	0.805874	1.081438e-49	-8.615850e-47
Msa0096030	Msa1128060	0.808939	2.420321e-50	-8.615850e-47
Msa0109690	Msa1128060	0.811007	8.681519e-51	-8.615850e-47
Msa0114060	Msa1128060	0.810420	1.162872e-50	-8.615850e-47
Msa0612960	Msa1128060	0.811141	8.122287e-51	-8.615850e-47
Msa0616160	Msa1128060	0.814691	1.354225e-51	-8.615850e-47
Msa0617640	Msa1128060	0.802209	6.253621e-49	-8.615850e-47
Msa0621490	Msa1128060	0.830768	2.438207e-55	-8.615850e-47
Msa0622100	Msa1128060	0.817337	3.474523e-52	-8.615850e-47
Msa0623790	Msa1128060	0.826101	3.262918e-54	-8.615850e-47
Msa0636070	Msa1128060	0.804387	2.213565e-49	-8.615850e-47
Msa0643560	Msa1128060	0.840448	8.643960e-58	-8.615850e-47
Msa0647500	Msa1128060	0.810154	1.327355e-50	-8.615850e-47
Msa0649110	Msa1128060	0.806429	8.263466e-50	-8.615850e-47
Msa0649350	Msa1128060	0.817563	3.090235e-52	-8.615850e-47
Msa0663390	Msa1128060	0.808258	3.383670e-50	-8.615850e-47
Msa0675410	Msa1128060	0.824411	8.189240e-54	-8.615850e-47
Msa0688390	Msa1128060	0.844210	8.704190e-59	-8.615850e-47
Msa0688960	Msa1128060	0.828292	9.751674e-55	-8.615850e-47
Msa0698400	Msa1128060	0.831148	1.966984e-55	-8.615850e-47
Msa0707250	Msa1128060	0.816257	6.070951e-52	-8.615850e-47
Msa0707310	Msa1128060	0.817883	2.616693e-52	-8.615850e-47
Msa0709400	Msa1128060	0.804400	2.199876e-49	-8.615850e-47
Msa0711450	Msa1128060	0.820497	6.647948e-53	-8.615850e-47
Msa0740510	Msa1128060	0.802278	6.052736e-49	-8.615850e-47
Msa0741440	Msa1128060	0.837506	4.993050e-57	-8.615850e-47
Msa0742750	Msa1128060	0.832924	7.159770e-56	-8.615850e-47
Msa0751850	Msa1128060	0.825657	4.159247e-54	-8.615850e-47
Msa0767300	Msa1128060	0.801932	7.131539e-49	-8.615850e-47
Msa0778490	Msa1128060	0.801838	7.454184e-49	-8.615850e-47
Msa0786750	Msa1128060	0.802136	6.474994e-49	-8.615850e-47
Msa0794670	Msa1128060	0.806401	8.375176e-50	-8.615850e-47
Msa0796700	Msa1128060	0.837952	3.835880e-57	-8.615850e-47
Msa0808270	Msa1128060	0.814441	1.538126e-51	-8.615850e-47
Msa0820770	Msa1128060	0.802578	5.250381e-49	-8.615850e-47
Msa0822500	Msa1128060	0.828117	1.074471e-54	-8.615850e-47
Msa0831110	Msa1128060	0.860612	1.829285e-63	-8.615850e-47
Msa0832150	Msa1128060	0.815344	9.699191e-52	-8.615850e-47
Msa0833460	Msa1128060	0.801950	7.068083e-49	-8.615850e-47
Msa0129190	Msa1128060	-0.818497	1.900564e-52	-8.615850e-47
Msa0138020	Msa1128060	0.800508	1.394437e-48	-8.615850e-47
Msa0148080	Msa1128060	0.804260	2.352446e-49	-8.615850e-47
Msa0159930	Msa1128060	0.818190	2.230598e-52	-8.615850e-47
Msa0189320	Msa1128060	0.847193	1.350413e-59	-8.615850e-47
Msa0211150	Msa1128060	0.804469	2.127913e-49	-8.615850e-47
Msa0217680	Msa1128060	0.811432	7.023406e-51	-8.615850e-47
Msa0218270	Msa1128060	0.801535	8.599523e-49	-8.615850e-47
Msa0220580	Msa1128060	0.801522	8.653315e-49	-8.615850e-47
Msa0231690	Msa1128060	0.813712	2.227348e-51	-8.615850e-47
Msa0383800	Msa1128060	0.811481	6.850683e-51	-8.615850e-47
Msa0385490	Msa1128060	0.805683	1.185637e-49	-8.615850e-47
Msa0393080	Msa1128060	0.823538	1.312796e-53	-8.615850e-47
Msa0398670	Msa1128060	0.830443	2.928313e-55	-8.615850e-47
Msa0440750	Msa1128060	0.820010	8.597190e-53	-8.615850e-47
Msa0442610	Msa1128060	0.813031	3.144114e-51	-8.615850e-47
Msa0466250	Msa1128060	0.823792	1.144597e-53	-8.615850e-47
Msa0477080	Msa1128060	0.805250	1.461500e-49	-8.615850e-47
Msa0479970	Msa1128060	0.805517	1.284809e-49	-8.615850e-47
Msa0481530	Msa1128060	0.802159	6.402017e-49	-8.615850e-47
Msa1017630	Msa1128060	0.801163	1.024779e-48	-8.615850e-47
Msa1018100	Msa1128060	0.805097	1.573849e-49	-8.615850e-47
Msa1033400	Msa1128060	0.813292	2.755939e-51	-8.615850e-47
Msa1034150	Msa1128060	0.825878	3.687398e-54	-8.615850e-47
Msa1037420	Msa1128060	0.803435	3.490483e-49	-8.615850e-47
Msa1046020	Msa1128060	0.818381	2.019015e-52	-8.615850e-47
Msa1046060	Msa1128060	0.821967	3.046496e-53	-8.615850e-47
Msa1073080	Msa1128060	0.838338	3.050853e-57	-8.615850e-47
Msa1080640	Msa1128060	0.808626	2.824360e-50	-8.615850e-47
Msa1091100	Msa1128060	0.807492	4.923001e-50	-8.615850e-47
Msa0241140	Msa1128060	0.802457	5.560542e-49	-8.615850e-47
Msa0241390	Msa1128060	0.821774	3.376745e-53	-8.615850e-47
Msa0257500	Msa1128060	0.815156	1.068111e-51	-8.615850e-47
Msa0257520	Msa1128060	0.812627	3.854857e-51	-8.615850e-47
Msa0260680	Msa1128060	0.843796	1.123942e-58	-8.615850e-47
Msa0265380	Msa1128060	0.829886	4.004088e-55	-8.615850e-47
Msa0271510	Msa1128060	0.804350	2.253695e-49	-8.615850e-47
Msa0279220	Msa1128060	0.805488	1.302887e-49	-8.615850e-47
Msa0279240	Msa1128060	0.815815	7.617768e-52	-8.615850e-47
Msa0280090	Msa1128060	0.814480	1.508253e-51	-8.615850e-47
Msa0303360	Msa1128060	0.822875	1.874408e-53	-8.615850e-47
Msa0309770	Msa1128060	0.870399	1.502443e-66	-8.615850e-47
Msa0318980	Msa1128060	0.816764	4.674485e-52	-8.615850e-47
Msa0345970	Msa1128060	0.815996	6.943216e-52	-8.615850e-47
Msa0361140	Msa1128060	0.811360	7.280211e-51	-8.615850e-47
Msa0363790	Msa1128060	0.806566	7.728822e-50	-8.615850e-47
Msa1124960	Msa1128060	0.806495	8.003133e-50	-8.615850e-47
Msa1126450	Msa1128060	0.813061	3.096285e-51	-8.615850e-47
Msa1128060	Msa1134090	0.802279	6.049144e-49	-8.615850e-47
Msa1128060	Msa1147280	0.814206	1.733283e-51	-8.615850e-47
Msa1128060	Msa1163540	0.811580	6.521422e-51	-8.615850e-47
Msa1128060	Msa1176720	0.806649	7.423866e-50	-8.615850e-47
Msa1128060	Msa1179630	0.803432	3.496782e-49	-8.615850e-47
Msa1128060	Msa1203250	0.811268	7.622221e-51	-8.615850e-47
Msa1128060	Msa1204530	0.821239	4.487824e-53	-8.615850e-47
Msa1128060	Msa1204630	0.818031	2.423078e-52	-8.615850e-47
Msa1128060	Msa1207310	0.805059	1.602758e-49	-8.615850e-47
Msa1128060	Msa1213980	0.802687	4.984133e-49	-8.615850e-47
Msa1128060	Msa1231840	0.826035	3.383152e-54	-8.615850e-47
Msa1128060	Msa1244600	0.818901	1.539128e-52	-8.615850e-47
Msa1128060	Msa1274560	0.802683	4.993089e-49	-8.615850e-47
Msa1128060	Msa1280320	0.805011	1.640324e-49	-8.615850e-47
Msa1128060	Msa1287460	0.825513	4.499136e-54	-8.615850e-47
Msa1128060	Msa1305810	0.808768	2.633349e-50	-8.615850e-47
Msa1128060	Msa1306560	0.854830	9.477613e-62	-8.615850e-47
Msa1128060	Msa1306840	0.807867	4.098491e-50	-8.615850e-47
Msa1128060	Msa1308870	0.806248	9.021839e-50	-8.615850e-47
Msa1128060	Msa1331000	0.814075	1.852846e-51	-8.615850e-47
Msa1128060	Msa1331320	0.817809	2.719180e-52	-8.615850e-47
Msa1128060	Msa1331350	0.812697	3.720557e-51	-8.615850e-47
Msa1128060	Msa1346840	0.814093	1.836320e-51	-8.615850e-47
Msa1128060	Msa1348890	0.801681	8.028470e-49	-8.615850e-47
Msa1128060	Msa1351730	0.802970	4.356314e-49	-8.615850e-47
Msa1128060	Msa1351890	0.846581	1.985916e-59	-8.615850e-47
Msa1128060	Msa1353980	0.823879	1.092157e-53	-8.615850e-47
Msa1128060	Msa1371940	0.800896	1.162138e-48	-8.615850e-47
Msa1128060	Msa1375380	0.840482	8.466682e-58	-8.615850e-47
Msa1128060	Msa1385770	0.810037	1.406345e-50	-8.615850e-47
Msa1128060	Msa1389510	0.834447	2.981834e-56	-8.615850e-47
Msa1128060	Msa1391410	0.829526	4.899676e-55	-8.615850e-47
Msa1128060	Msa1393570	0.817861	2.647158e-52	-8.615850e-47
Msa1128060	Msa1394380	0.822562	2.216407e-53	-8.615850e-47
Msa1128060	Msa1404300	0.805364	1.383735e-49	-8.615850e-47
Msa1128060	Msa1409240	0.809433	1.897007e-50	-8.615850e-47
Msa1128060	Msa1411100	0.809126	2.207827e-50	-8.615850e-47
Msa1128060	Msa1412530	0.811190	7.923057e-51	-8.615850e-47
Msa1128060	Msa1419690	0.816175	6.333067e-52	-8.615850e-47
Msa1128060	Msa1420990	0.801884	7.294825e-49	-8.615850e-47
Msa1128060	Msa1424750	0.805750	1.147970e-49	-8.615850e-47
Msa1128060	Msa1426030	0.814851	1.248096e-51	-8.615850e-47
Msa1128060	Msa1433390	0.803056	4.181793e-49	-8.615850e-47
Msa1128060	Msa1434140	0.800891	1.164894e-48	-8.615850e-47
Msa1128060	Msa1440950	0.846748	1.787297e-59	-8.615850e-47
Msa1128060	Msa1443850	0.827486	1.523613e-54	-8.615850e-47
Msa1128060	Msa1460050	0.800117	1.675461e-48	-8.615850e-47
Msa0484720	Msa1128060	0.802057	6.718894e-49	-8.615850e-47
Msa0510930	Msa1128060	0.801112	1.049694e-48	-8.615850e-47
Msa0541360	Msa1128060	0.810371	1.191862e-50	-8.615850e-47
Msa0541410	Msa1128060	0.816116	6.528546e-52	-8.615850e-47
Msa0558230	Msa1128060	0.814002	1.922889e-51	-8.615850e-47
Msa0577500	Msa1128060	0.813491	2.492418e-51	-8.615850e-47
Msa0596800	Msa1128060	0.831398	1.707759e-55	-8.615850e-47
Msa0598810	Msa1128060	0.814127	1.804912e-51	-8.615850e-47
Msa0602390	Msa1128060	0.825027	5.861705e-54	-8.615850e-47
Msa0895120	Msa1128060	0.841686	4.086601e-58	-8.615850e-47
Msa0920610	Msa1128060	0.804625	1.975058e-49	-8.615850e-47
Msa0945970	Msa1128060	0.850536	1.594014e-60	-8.615850e-47
Msa0969810	Msa1128060	0.823810	1.133601e-53	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1128060	MtrunA17_Chr7g0271341	97.619	168	4	0	142	309	41	208	1.84e-115	332
Msa1128060	MtrunA17_Chr7g0271331	91.034	145	8	1	1	145	1	140	1.10e-85	253

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1128060	AT5G26610.1	62.829	304	99	4	14	309	4	301	3.48e-118	342
Msa1128060	AT5G26610.3	62.829	304	99	4	14	309	4	301	3.48e-118	342
Msa1128060	AT5G26610.2	62.829	304	99	4	14	309	4	301	3.48e-118	342

Find 81 sgRNAs with CRISPR-Local

Find 289 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTCAGTTGGCCTTTGATTTC+TGG	0.025644	7_3:-79851317	None:intergenic
CTCCCAGTGGCCTCTATATT+TGG	0.158867	7_3:+79854318	Msa1128060:CDS
GTCGCCATTATCAATTTAAA+AGG	0.180715	7_3:+79854445	Msa1128060:three_prime_UTR
CACATTACTTCTTCTAATAT+TGG	0.223026	7_3:+79851382	Msa1128060:CDS
CAGCGAAATACTTTGAAGTT+TGG	0.249799	7_3:+79853747	Msa1128060:CDS
TGATACTGATAGTGGTAAAT+TGG	0.292288	7_3:+79854705	Msa1128060:three_prime_UTR
TCAGTTGGCCTTTGATTTCT+GGG	0.296377	7_3:-79851316	None:intergenic
TTTAAAAGGGGTAAAACGTT+TGG	0.299794	7_3:+79854459	Msa1128060:three_prime_UTR
TCGGTTTGGTATGTTATATC+TGG	0.306289	7_3:+79854417	Msa1128060:three_prime_UTR
GCTGCTGTTGCTGCTACCTT+TGG	0.323910	7_3:-79851124	None:intergenic
AGCGAAATACTTTGAAGTTT+GGG	0.324081	7_3:+79853748	Msa1128060:CDS
TGAACTCAACGCAGGCAAAT+TGG	0.329359	7_3:+79850929	Msa1128060:five_prime_UTR
TGTCATAACTCCTGTGGTTT+CGG	0.334609	7_3:+79854398	Msa1128060:three_prime_UTR
ATTGTTGAACCAATAAAATC+TGG	0.337751	7_3:+79852706	Msa1128060:CDS
AGTTGAGCCAATCCCTGATA+TGG	0.367231	7_3:+79854616	Msa1128060:three_prime_UTR
CTGCAACAAGCAATACAAAT+TGG	0.368353	7_3:+79853185	Msa1128060:CDS
TTAAAAGGGGTAAAACGTTT+GGG	0.376747	7_3:+79854460	Msa1128060:three_prime_UTR
CTTCAACTGCAACAAGAGTC+TGG	0.398631	7_3:+79853663	Msa1128060:CDS
TCGCCATTATCAATTTAAAA+GGG	0.408329	7_3:+79854446	Msa1128060:three_prime_UTR
TGCTTGCCGACCCCTAGTCT+TGG	0.413943	7_3:-79852739	None:intergenic
GCAGCAGTAGCCGGGATGAT+AGG	0.421605	7_3:+79853394	Msa1128060:CDS
TGCTGCTACCTTTGGTCCAT+CGG	0.430235	7_3:-79851116	None:intergenic
CCGGAGAAACCAATTCAAAA+AGG	0.431698	7_3:+79851182	Msa1128060:CDS
TAACTCCTGTGGTTTCGGTT+TGG	0.436695	7_3:+79854403	Msa1128060:three_prime_UTR
TTTGGGATTCTTTATTACCT+TGG	0.440627	7_3:+79854477	Msa1128060:three_prime_UTR
GCCAACTGAAAACGTTGATC+TGG	0.441158	7_3:+79851330	Msa1128060:CDS
AAACCGAGGTGAAAGAAATT+CGG	0.445862	7_3:+79853142	Msa1128060:CDS
AAATGCATGGCAGCAGTAGC+CGG	0.446006	7_3:+79853385	Msa1128060:CDS
GATTCAGAGGAAACTGAAAC+TGG	0.455484	7_3:-79853693	None:intergenic
TGACATTGTGTATTATTGTA+AGG	0.467647	7_3:+79854553	Msa1128060:three_prime_UTR
GCAGCGTCAAGAAAGAGAAT+TGG	0.477468	7_3:+79853431	Msa1128060:CDS
GGTTGGAAAGGAAAGGGTCT+TGG	0.481515	7_3:+79851427	Msa1128060:CDS
AGTAGTAAGCATGATTCTTC+TGG	0.486151	7_3:+79851156	Msa1128060:CDS
AAGACACTTGATACTGATAG+TGG	0.489694	7_3:+79854697	Msa1128060:three_prime_UTR
TGCTAAAGGCACTGCTTCCA+AGG	0.490091	7_3:+79853776	Msa1128060:CDS
TGCTACTGCACTTACAGATC+AGG	0.494465	7_3:+79853722	Msa1128060:CDS
CAGAGGAGAATGTGAGGAAG+CGG	0.498036	7_3:+79852833	Msa1128060:CDS
TGGAAGTCGTTGTCGTCGGC+CGG	0.500206	7_3:+79850949	Msa1128060:five_prime_UTR
AAAACTCGATATTGAGTTGG+AGG	0.509907	7_3:+79852807	Msa1128060:CDS
CGTCGGCCGGCCGTCTGACA+CGG	0.510690	7_3:+79850962	Msa1128060:five_prime_UTR
AATGCATGGCAGCAGTAGCC+GGG	0.514904	7_3:+79853386	Msa1128060:CDS
AATTCTCGTTCTCGACAAGT+TGG	0.518718	7_3:+79850898	Msa1128060:five_prime_UTR
ATTAAACGTTATTGTTCGAA+CGG	0.523747	7_3:-79854671	None:intergenic
GCAGCGTTTCAAAGAAATGA+AGG	0.527078	7_3:+79853362	Msa1128060:intron
CGCCATTATCAATTTAAAAG+GGG	0.529945	7_3:+79854447	Msa1128060:three_prime_UTR
TTGTTGAACCAATAAAATCT+GGG	0.530310	7_3:+79852707	Msa1128060:CDS
TCCTCACCGTGTCAGACGGC+CGG	0.531127	7_3:-79850968	None:intergenic
AGCATGATTCTTCTGGTGCC+CGG	0.533954	7_3:+79851163	Msa1128060:CDS
AGGAGACAGAGGAGAATGTG+AGG	0.541889	7_3:+79852827	Msa1128060:CDS
GGATTAGAGATCCAAGACTA+GGG	0.542577	7_3:+79852728	Msa1128060:CDS
GCTATCGTTTCCAAATATAG+AGG	0.545451	7_3:-79854328	None:intergenic
TTTCCAAATATAGAGGCCAC+TGG	0.545518	7_3:-79854321	None:intergenic
AAAATGGGTTGGAAAGGAAA+GGG	0.550610	7_3:+79851421	Msa1128060:CDS
CTTCCGAATTTCTTTCACCT+CGG	0.551399	7_3:-79853145	None:intergenic
AGTAGCAGTCTTAGATTCAG+AGG	0.551520	7_3:-79853706	None:intergenic
AGAGGAGAATGTGAGGAAGC+GGG	0.552156	7_3:+79852834	Msa1128060:CDS
ATTAAACACAGACTAAATGT+TGG	0.559671	7_3:+79854503	Msa1128060:three_prime_UTR
GGGATTAGAGATCCAAGACT+AGG	0.568146	7_3:+79852727	Msa1128060:CDS
TTCGCTTGCCCAGAAATCAA+AGG	0.569183	7_3:+79851308	Msa1128060:CDS
GACTTCCTCACCGTGTCAGA+CGG	0.573563	7_3:-79850972	None:intergenic
AGTCTGTGTTTAATTCTCCA+AGG	0.581826	7_3:-79854494	None:intergenic
GTTCTTATGATCACAATCAC+AGG	0.587119	7_3:+79853232	Msa1128060:CDS
ATGGATTACCGATGGACCAA+AGG	0.600719	7_3:+79851108	Msa1128060:CDS
TATTGAGTTGGAGGAGACAG+AGG	0.602521	7_3:+79852816	Msa1128060:CDS
TGTTCAGGCATACGATGATG+AGG	0.605074	7_3:+79851282	Msa1128060:intron
AAAGAAATGAAGGAAATGCA+TGG	0.606433	7_3:+79853372	Msa1128060:CDS
AACACAGACTAAATGTTGGA+AGG	0.611678	7_3:+79854507	Msa1128060:three_prime_UTR
TTCCAAATATAGAGGCCACT+GGG	0.615272	7_3:-79854320	None:intergenic
CTGATGCTCAAAAGCAGCAA+CGG	0.615685	7_3:+79853640	Msa1128060:CDS
ACATACCAAACCGAAACCAC+AGG	0.622997	7_3:-79854408	None:intergenic
CAAGCAATACAAATTGGCAA+TGG	0.628516	7_3:+79853191	Msa1128060:CDS
AAATTGGAAGTCGTTGTCGT+CGG	0.630320	7_3:+79850945	Msa1128060:five_prime_UTR
GTGTAATGTCATAACTCCTG+TGG	0.636998	7_3:+79854392	Msa1128060:three_prime_UTR
GGTCTTGGCAAACATGAACA+AGG	0.637731	7_3:+79851442	Msa1128060:CDS
CGAGGTGAAAGAAATTCGGA+AGG	0.652698	7_3:+79853146	Msa1128060:CDS
AGAGATCCAAGACTAGGGGT+CGG	0.658633	7_3:+79852733	Msa1128060:CDS
GGAGAATGTGAGGAAGCGGG+AGG	0.691377	7_3:+79852837	Msa1128060:CDS
AGTCGCAGTGAACTCAACGC+AGG	0.695734	7_3:+79850921	Msa1128060:five_prime_UTR
TTATGATCACAATCACAGGA+AGG	0.699276	7_3:+79853236	Msa1128060:CDS
GATTAGAGATCCAAGACTAG+GGG	0.710842	7_3:+79852729	Msa1128060:CDS
AAAGAAGCAAAATCTCCCAG+TGG	0.759478	7_3:+79854305	Msa1128060:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATCAAACTAAAAAAAAATAA+AGG	-	chr7_3:79851008-79851027	None:intergenic	10.0%
!!	TATTAATTAATAATGATGAA+TGG	-	chr7_3:79851234-79851253	None:intergenic	10.0%
!!!	ATTATTTTTTTATAAAACCA+GGG	-	chr7_3:79852419-79852438	None:intergenic	10.0%
!!	GAATATTAAAATAATTTAAC+AGG	-	chr7_3:79853484-79853503	None:intergenic	10.0%
!!!	TTAGTTTGATTTTCAATTTT+CGG	+	chr7_3:79851018-79851037	Msa1128060:intron	15.0%
!!	ATAAATTGTACATGTTTATA+TGG	-	chr7_3:79851545-79851564	None:intergenic	15.0%
!!!	TTTTTTCAAAATAATGACAA+TGG	+	chr7_3:79852046-79852065	Msa1128060:intron	15.0%
!!!	TTTTTCAAAATAATGACAAT+GGG	+	chr7_3:79852047-79852066	Msa1128060:intron	15.0%
!!!	CATTATTTTTTTATAAAACC+AGG	-	chr7_3:79852420-79852439	None:intergenic	15.0%
!!	ATATTATATATACCCATATA+TGG	+	chr7_3:79852583-79852602	Msa1128060:intron	15.0%
!!	TATTATATATACCCATATAT+GGG	+	chr7_3:79852584-79852603	Msa1128060:intron	15.0%
!!!	GAATCAAAAATACTTTATTT+TGG	+	chr7_3:79852647-79852666	Msa1128060:intron	15.0%
!!	AATTGAAATTGAAATTGTTC+AGG	+	chr7_3:79851267-79851286	Msa1128060:intron	20.0%
!!!	TTTTAAGCTTCTTCAAAAAA+TGG	+	chr7_3:79851405-79851424	Msa1128060:CDS	20.0%
!!	TTTAAGCTTCTTCAAAAAAT+GGG	+	chr7_3:79851406-79851425	Msa1128060:CDS	20.0%
!!	CTTTCATTTAATTATACACA+TGG	-	chr7_3:79851494-79851513	None:intergenic	20.0%
!!	ATATTTAATCTATGAAGGTA+AGG	-	chr7_3:79851576-79851595	None:intergenic	20.0%
!!	ACTAGATATTTAATCTATGA+AGG	-	chr7_3:79851581-79851600	None:intergenic	20.0%
!!	TAATGGAAATATTCATAGTT+TGG	+	chr7_3:79852014-79852033	Msa1128060:intron	20.0%
!!!	AATGAACAATTATTTCTCTT+TGG	+	chr7_3:79852083-79852102	Msa1128060:intron	20.0%
!!!	TCTATTTTCGTAAATAACAA+AGG	-	chr7_3:79852134-79852153	None:intergenic	20.0%
!!	CAAATATAAATCAATTATCC+AGG	-	chr7_3:79852329-79852348	None:intergenic	20.0%
!!	TATTTGTTTACAATTGAGAT+TGG	+	chr7_3:79852343-79852362	Msa1128060:intron	20.0%
!!	ATTTGTTTACAATTGAGATT+GGG	+	chr7_3:79852344-79852363	Msa1128060:intron	20.0%
!!!	TTAATTGTAATGGAACATTA+TGG	+	chr7_3:79852514-79852533	Msa1128060:intron	20.0%
!!!	AAAATCATATAGTAGTTTTG+AGG	+	chr7_3:79852903-79852922	Msa1128060:intron	20.0%
!!	AAAATAATTTAACAGGCAAA+AGG	-	chr7_3:79853477-79853496	None:intergenic	20.0%
!!	ATATACTCATAAGAATGAAA+AGG	-	chr7_3:79854231-79854250	None:intergenic	20.0%
!	TATATATGTTCCTCCTAATT+AGG	+	chr7_3:79851077-79851096	Msa1128060:intron	25.0%
!!!	ATTTTTTTGACCTAATTAGG+AGG	-	chr7_3:79851090-79851109	None:intergenic	25.0%
!	TCCTAATTAGGTCAAAAAAA+TGG	+	chr7_3:79851089-79851108	Msa1128060:intron	25.0%
!!!	TCCATTTTTTTGACCTAATT+AGG	-	chr7_3:79851093-79851112	None:intergenic	25.0%
!	CACATTACTTCTTCTAATAT+TGG	+	chr7_3:79851382-79851401	Msa1128060:CDS	25.0%
!!!	GACACCTTTGTTATATTTTA+GGG	+	chr7_3:79851619-79851638	Msa1128060:intron	25.0%
!	ACTACCCTAAAATATAACAA+AGG	-	chr7_3:79851626-79851645	None:intergenic	25.0%
!	TTGCACTTACTTAATTGTAA+TGG	+	chr7_3:79852504-79852523	Msa1128060:intron	25.0%
!	ATTGTTGAACCAATAAAATC+TGG	+	chr7_3:79852706-79852725	Msa1128060:CDS	25.0%
!	TTGTTGAACCAATAAAATCT+GGG	+	chr7_3:79852707-79852726	Msa1128060:CDS	25.0%
!	AAAAAAACTCGATATTGAGT+TGG	+	chr7_3:79852804-79852823	Msa1128060:CDS	25.0%
!!	CATTTTATCTAACACTAACT+TGG	+	chr7_3:79853263-79853282	Msa1128060:intron	25.0%
!!!	TTTTTTAAGTTGAGTTGATC+CGG	-	chr7_3:79853940-79853959	None:intergenic	25.0%
!	TTTGCATCATTATGATCTAT+AGG	+	chr7_3:79854065-79854084	Msa1128060:intron	25.0%
!	TCGCCATTATCAATTTAAAA+GGG	+	chr7_3:79854446-79854465	Msa1128060:three_prime_UTR	25.0%
!!	TACCCCTTTTAAATTGATAA+TGG	-	chr7_3:79854452-79854471	None:intergenic	25.0%
!	ATTAAACACAGACTAAATGT+TGG	+	chr7_3:79854503-79854522	Msa1128060:three_prime_UTR	25.0%
!	TGACATTGTGTATTATTGTA+AGG	+	chr7_3:79854553-79854572	Msa1128060:three_prime_UTR	25.0%
!	GAACGGAGAAATAAAAATAA+AGG	-	chr7_3:79854657-79854676	None:intergenic	25.0%
!	ATTAAACGTTATTGTTCGAA+CGG	-	chr7_3:79854674-79854693	None:intergenic	25.0%
!!	TCAAAAAAATGGATTACCGA+TGG	+	chr7_3:79851100-79851119	Msa1128060:exon	30.0%
	AAACCAATTCAAAAAGGATC+AGG	+	chr7_3:79851188-79851207	Msa1128060:CDS	30.0%
!	TAGTAGTTTGTCATAAGCAA+CGG	+	chr7_3:79851597-79851616	Msa1128060:intron	30.0%
!!	GGACACCTTTGTTATATTTT+AGG	+	chr7_3:79851618-79851637	Msa1128060:intron	30.0%
!	AAAACCATAGTGTTATTCAG+TGG	+	chr7_3:79851803-79851822	Msa1128060:intron	30.0%
	CTACACCAATAGAATATAAG+AGG	+	chr7_3:79851956-79851975	Msa1128060:intron	30.0%
	AACAGCCTCTTATATTCTAT+TGG	-	chr7_3:79851964-79851983	None:intergenic	30.0%
!!!	TCTCAAAGAACACTAGTTTT+AGG	+	chr7_3:79851983-79852002	Msa1128060:intron	30.0%
!!!	CTCAAAGAACACTAGTTTTA+GGG	+	chr7_3:79851984-79852003	Msa1128060:intron	30.0%
	ATATTCATAGTTTGGCGAAA+TGG	+	chr7_3:79852022-79852041	Msa1128060:intron	30.0%
	TATTCATAGTTTGGCGAAAT+GGG	+	chr7_3:79852023-79852042	Msa1128060:intron	30.0%
	AAAGGAAAACAAGTCTGAAA+GGG	-	chr7_3:79852116-79852135	None:intergenic	30.0%
	ATGCAATCAAATCCCAAATA+GGG	-	chr7_3:79852287-79852306	None:intergenic	30.0%
	TATGCAATCAAATCCCAAAT+AGG	-	chr7_3:79852288-79852307	None:intergenic	30.0%
!	TATTTGGGATTTGATTGCAT+AGG	+	chr7_3:79852287-79852306	Msa1128060:intron	30.0%
	TTAAGTAAGTGCAAATACAG+AGG	-	chr7_3:79852498-79852517	None:intergenic	30.0%
	TATATATACCCATATATGGG+AGG	+	chr7_3:79852587-79852606	Msa1128060:intron	30.0%
	ATATATACCCATATATGGGA+GGG	+	chr7_3:79852588-79852607	Msa1128060:intron	30.0%
!	TCTCTAATCCCAGATTTTAT+TGG	-	chr7_3:79852718-79852737	None:intergenic	30.0%
!	ATATATGCATGCCTTTTTAC+CGG	+	chr7_3:79852981-79853000	Msa1128060:intron	30.0%
	TCAGAATCAAGTCAACAAAA+GGG	-	chr7_3:79853289-79853308	None:intergenic	30.0%
	ATCAGAATCAAGTCAACAAA+AGG	-	chr7_3:79853290-79853309	None:intergenic	30.0%
!!	TTGTTGACTTGATTCTGATT+TGG	+	chr7_3:79853291-79853310	Msa1128060:intron	30.0%
!	TCAATGATTTTGCATTACGT+AGG	-	chr7_3:79853332-79853351	None:intergenic	30.0%
	AAAGAAATGAAGGAAATGCA+TGG	+	chr7_3:79853372-79853391	Msa1128060:CDS	30.0%
	ACCCATAGCCAAAATAAAAT+GGG	-	chr7_3:79853515-79853534	None:intergenic	30.0%
!!!	ATTTTATTTTGGCTATGGGT+GGG	+	chr7_3:79853515-79853534	Msa1128060:intron	30.0%
	TATCATGGTAAGAGTAAAGT+TGG	-	chr7_3:79853586-79853605	None:intergenic	30.0%
!	TACCATGATATCTTCCTTTT+TGG	+	chr7_3:79853596-79853615	Msa1128060:intron	30.0%
	AACCAAAAAGGAAGATATCA+TGG	-	chr7_3:79853601-79853620	None:intergenic	30.0%
!!	AGCGAAATACTTTGAAGTTT+GGG	+	chr7_3:79853748-79853767	Msa1128060:CDS	30.0%
!	TATTTTTCCTTCTACTACTG+TGG	+	chr7_3:79853829-79853848	Msa1128060:intron	30.0%
	AACTAAATGATGAAGTCTAG+TGG	-	chr7_3:79853870-79853889	None:intergenic	30.0%
!!!	AGCACCAATGTTTTAATAAC+CGG	+	chr7_3:79853918-79853937	Msa1128060:intron	30.0%
	TGATCCGGTTATTAAAACAT+TGG	-	chr7_3:79853925-79853944	None:intergenic	30.0%
	AAAAAATAACCGCATCAAAC+CGG	+	chr7_3:79853954-79853973	Msa1128060:intron	30.0%
	CAATGTTTAAAAGATCAGAC+AGG	-	chr7_3:79854108-79854127	None:intergenic	30.0%
	GTCGCCATTATCAATTTAAA+AGG	+	chr7_3:79854445-79854464	Msa1128060:three_prime_UTR	30.0%
	CGCCATTATCAATTTAAAAG+GGG	+	chr7_3:79854447-79854466	Msa1128060:three_prime_UTR	30.0%
	TTTAAAAGGGGTAAAACGTT+TGG	+	chr7_3:79854459-79854478	Msa1128060:three_prime_UTR	30.0%
	TTAAAAGGGGTAAAACGTTT+GGG	+	chr7_3:79854460-79854479	Msa1128060:three_prime_UTR	30.0%
!	TTTGGGATTCTTTATTACCT+TGG	+	chr7_3:79854477-79854496	Msa1128060:three_prime_UTR	30.0%
!	TTTTTATGTAACAGAGCACA+TGG	+	chr7_3:79854580-79854599	Msa1128060:three_prime_UTR	30.0%
!!	TGATACTGATAGTGGTAAAT+TGG	+	chr7_3:79854705-79854724	Msa1128060:three_prime_UTR	30.0%
!!	TGGTAATCAAGCTATTTTAG+TGG	+	chr7_3:79854725-79854744	Msa1128060:three_prime_UTR	30.0%
	AGTAGTAAGCATGATTCTTC+TGG	+	chr7_3:79851156-79851175	Msa1128060:CDS	35.0%
!!	CTTTTTGAATTGGTTTCTCC+GGG	-	chr7_3:79851184-79851203	None:intergenic	35.0%
!!	CCTTTTTGAATTGGTTTCTC+CGG	-	chr7_3:79851185-79851204	None:intergenic	35.0%
!	CAACCTGATCCTTTTTGAAT+TGG	-	chr7_3:79851194-79851213	None:intergenic	35.0%
	CAATTCAAAAAGGATCAGGT+TGG	+	chr7_3:79851192-79851211	Msa1128060:intron	35.0%
	AGCTTCTTCAAAAAATGGGT+TGG	+	chr7_3:79851410-79851429	Msa1128060:CDS	35.0%
!!	CTTCAAAAAATGGGTTGGAA+AGG	+	chr7_3:79851415-79851434	Msa1128060:CDS	35.0%
!!	AAAAATGGGTTGGAAAGGAA+AGG	+	chr7_3:79851420-79851439	Msa1128060:CDS	35.0%
!!	AAAATGGGTTGGAAAGGAAA+GGG	+	chr7_3:79851421-79851440	Msa1128060:CDS	35.0%
!	TGCACACAATTTTGCAATTG+TGG	-	chr7_3:79851662-79851681	None:intergenic	35.0%
	TTGCAAAATTGTGTGCAGAA+TGG	+	chr7_3:79851665-79851684	Msa1128060:intron	35.0%
	AAAGCCACTGAATAACACTA+TGG	-	chr7_3:79851810-79851829	None:intergenic	35.0%
!	GAACAAAGAAGCATGAAAGA+AGG	+	chr7_3:79851879-79851898	Msa1128060:intron	35.0%
!!!	AGAACACTAGTTTTAGGGTT+CGG	+	chr7_3:79851989-79852008	Msa1128060:intron	35.0%
	ATTGTTCATTCGCGAAACTT+AGG	-	chr7_3:79852073-79852092	None:intergenic	35.0%
	CAAAGGAAAACAAGTCTGAA+AGG	-	chr7_3:79852117-79852136	None:intergenic	35.0%
	TGCAATCAAATCCCAAATAG+GGG	-	chr7_3:79852286-79852305	None:intergenic	35.0%
	TCAATTATCCAGGAAGAAGA+CGG	-	chr7_3:79852319-79852338	None:intergenic	35.0%
	ACAATTGAGATTGGGATAGT+TGG	+	chr7_3:79852352-79852371	Msa1128060:intron	35.0%
!	CACCAAAGTCAAAGTACTTT+CGG	-	chr7_3:79852623-79852642	None:intergenic	35.0%
!!!	CAATATCGAGTTTTTTTCGC+TGG	-	chr7_3:79852801-79852820	None:intergenic	35.0%
!!	AAAACTCGATATTGAGTTGG+AGG	+	chr7_3:79852807-79852826	Msa1128060:CDS	35.0%
	TTCCTTATGACATACCAATC+CGG	-	chr7_3:79853003-79853022	None:intergenic	35.0%
	TCATAAGGAACCATCAACTT+TGG	+	chr7_3:79853013-79853032	Msa1128060:intron	35.0%
	TCAAGATCTTCCAAAGTTGA+TGG	-	chr7_3:79853026-79853045	None:intergenic	35.0%
!	TTCCTGCAGTTTTTATTACC+TGG	+	chr7_3:79853050-79853069	Msa1128060:intron	35.0%
	CGTGCACAATTTGAAAATTC+AGG	+	chr7_3:79853092-79853111	Msa1128060:intron	35.0%
	TGAGCAAAAAATTCAAACCG+AGG	+	chr7_3:79853128-79853147	Msa1128060:CDS	35.0%
	AAACCGAGGTGAAAGAAATT+CGG	+	chr7_3:79853142-79853161	Msa1128060:CDS	35.0%
	CTGCAACAAGCAATACAAAT+TGG	+	chr7_3:79853185-79853204	Msa1128060:CDS	35.0%
	CAAGCAATACAAATTGGCAA+TGG	+	chr7_3:79853191-79853210	Msa1128060:CDS	35.0%
	GTTCTTATGATCACAATCAC+AGG	+	chr7_3:79853232-79853251	Msa1128060:CDS	35.0%
	TTATGATCACAATCACAGGA+AGG	+	chr7_3:79853236-79853255	Msa1128060:CDS	35.0%
	ACAGGCAAAAGGATACATTT+GGG	-	chr7_3:79853466-79853485	None:intergenic	35.0%
	AACAGGCAAAAGGATACATT+TGG	-	chr7_3:79853467-79853486	None:intergenic	35.0%
	CAAAATAAAATGGGCAAGCA+AGG	-	chr7_3:79853506-79853525	None:intergenic	35.0%
!!	CTTGCTTGCCCATTTTATTT+TGG	+	chr7_3:79853504-79853523	Msa1128060:intron	35.0%
!!!	TGCCCATTTTATTTTGGCTA+TGG	+	chr7_3:79853510-79853529	Msa1128060:intron	35.0%
!!!	GCCCATTTTATTTTGGCTAT+GGG	+	chr7_3:79853511-79853530	Msa1128060:intron	35.0%
	CACCCATAGCCAAAATAAAA+TGG	-	chr7_3:79853516-79853535	None:intergenic	35.0%
!!!	CATTTTATTTTGGCTATGGG+TGG	+	chr7_3:79853514-79853533	Msa1128060:intron	35.0%
	TGGCATTAAGGAAACCAAAA+AGG	-	chr7_3:79853613-79853632	None:intergenic	35.0%
!!	CAGCGAAATACTTTGAAGTT+TGG	+	chr7_3:79853747-79853766	Msa1128060:CDS	35.0%
!!	AAGTTTGGGTTTTCTGCTAA+AGG	+	chr7_3:79853762-79853781	Msa1128060:CDS	35.0%
	GTTCAAAACATGATACCAGT+TGG	-	chr7_3:79853807-79853826	None:intergenic	35.0%
	AAAACCAGTTGAGTCAATTG+CGG	-	chr7_3:79854031-79854050	None:intergenic	35.0%
!	TGTAAAGCATCTTCAAGTAC+TGG	-	chr7_3:79854171-79854190	None:intergenic	35.0%
	TGAAAAGGAGCGAGTATTTA+AGG	-	chr7_3:79854216-79854235	None:intergenic	35.0%
	GCTATCGTTTCCAAATATAG+AGG	-	chr7_3:79854331-79854350	None:intergenic	35.0%
!!	TCGGTTTGGTATGTTATATC+TGG	+	chr7_3:79854417-79854436	Msa1128060:three_prime_UTR	35.0%
	AGTCTGTGTTTAATTCTCCA+AGG	-	chr7_3:79854497-79854516	None:intergenic	35.0%
	AACACAGACTAAATGTTGGA+AGG	+	chr7_3:79854507-79854526	Msa1128060:three_prime_UTR	35.0%
!	TCTTGAGTTTTGCCATATCA+GGG	-	chr7_3:79854631-79854650	None:intergenic	35.0%
!	TTCTTGAGTTTTGCCATATC+AGG	-	chr7_3:79854632-79854651	None:intergenic	35.0%
	AAGACACTTGATACTGATAG+TGG	+	chr7_3:79854697-79854716	Msa1128060:three_prime_UTR	35.0%
	AATTCTCGTTCTCGACAAGT+TGG	+	chr7_3:79850898-79850917	Msa1128060:five_prime_UTR	40.0%
	AAATTGGAAGTCGTTGTCGT+CGG	+	chr7_3:79850945-79850964	Msa1128060:five_prime_UTR	40.0%
	CCGGAGAAACCAATTCAAAA+AGG	+	chr7_3:79851182-79851201	Msa1128060:CDS	40.0%
!!	TCAGTTGGCCTTTGATTTCT+GGG	-	chr7_3:79851319-79851338	None:intergenic	40.0%
!!	TTCAGTTGGCCTTTGATTTC+TGG	-	chr7_3:79851320-79851339	None:intergenic	40.0%
!	TCCAGATCAACGTTTTCAGT+TGG	-	chr7_3:79851334-79851353	None:intergenic	40.0%
	AGCAGCTATATGCCAGTATT+AGG	-	chr7_3:79851706-79851725	None:intergenic	40.0%
	CTGCTGCAATTGCTAAGTAT+GGG	+	chr7_3:79851721-79851740	Msa1128060:intron	40.0%
	TGCTGCAATTGCTAAGTATG+GGG	+	chr7_3:79851722-79851741	Msa1128060:intron	40.0%
	ACATGAAGAAATGAATGCCG+CGG	+	chr7_3:79851906-79851925	Msa1128060:intron	40.0%
!!!	AGTTTTAGGGTTCGGTCTAA+TGG	+	chr7_3:79851997-79852016	Msa1128060:intron	40.0%
	GGTATAGTATGTAGCAGGAT+GGG	-	chr7_3:79852232-79852251	None:intergenic	40.0%
	ATAGCGGTATAGTATGTAGC+AGG	-	chr7_3:79852237-79852256	None:intergenic	40.0%
!!	ATACCGCTATCCCATTTTTG+TGG	+	chr7_3:79852247-79852266	Msa1128060:intron	40.0%
!!	ACTTTGAAGAGCATTAGCTG+GGG	-	chr7_3:79852395-79852414	None:intergenic	40.0%
!!	CACTTTGAAGAGCATTAGCT+GGG	-	chr7_3:79852396-79852415	None:intergenic	40.0%
!	AAAGCATCCCTCCCATATAT+GGG	-	chr7_3:79852598-79852617	None:intergenic	40.0%
	GACTTTCTGAACATGTATGC+AGG	+	chr7_3:79852682-79852701	Msa1128060:intron	40.0%
	GGATTAGAGATCCAAGACTA+GGG	+	chr7_3:79852728-79852747	Msa1128060:CDS	40.0%
	GATTAGAGATCCAAGACTAG+GGG	+	chr7_3:79852729-79852748	Msa1128060:CDS	40.0%
	GACATACCAATCCGGTAAAA+AGG	-	chr7_3:79852995-79853014	None:intergenic	40.0%
!!	TACCGGATTGGTATGTCATA+AGG	+	chr7_3:79852998-79853017	Msa1128060:intron	40.0%
	CACCAGGTAATAAAAACTGC+AGG	-	chr7_3:79853055-79853074	None:intergenic	40.0%
!	CTGCAGTTTTTATTACCTGG+TGG	+	chr7_3:79853053-79853072	Msa1128060:intron	40.0%
	TTTCAAATTGTGCACGAAGC+AGG	-	chr7_3:79853088-79853107	None:intergenic	40.0%
	CTTCCGAATTTCTTTCACCT+CGG	-	chr7_3:79853148-79853167	None:intergenic	40.0%
	GCAGCGTTTCAAAGAAATGA+AGG	+	chr7_3:79853362-79853381	Msa1128060:intron	40.0%
	ACAACAATGATTCCCTTACG+TGG	-	chr7_3:79853552-79853571	None:intergenic	40.0%
!!	ATCAGCACTGATTGGCATTA+AGG	-	chr7_3:79853625-79853644	None:intergenic	40.0%
!!!	TTTTGAGCATCAGCACTGAT+TGG	-	chr7_3:79853633-79853652	None:intergenic	40.0%
	GATTCAGAGGAAACTGAAAC+TGG	-	chr7_3:79853696-79853715	None:intergenic	40.0%
	AGTAGCAGTCTTAGATTCAG+AGG	-	chr7_3:79853709-79853728	None:intergenic	40.0%
!	ACTGGGAGATTTTGCTTCTT+TGG	-	chr7_3:79854306-79854325	None:intergenic	40.0%
	AAAGAAGCAAAATCTCCCAG+TGG	+	chr7_3:79854305-79854324	Msa1128060:CDS	40.0%
	TTCCAAATATAGAGGCCACT+GGG	-	chr7_3:79854323-79854342	None:intergenic	40.0%
	TTTCCAAATATAGAGGCCAC+TGG	-	chr7_3:79854324-79854343	None:intergenic	40.0%
	GTGTAATGTCATAACTCCTG+TGG	+	chr7_3:79854392-79854411	Msa1128060:three_prime_UTR	40.0%
	TGTCATAACTCCTGTGGTTT+CGG	+	chr7_3:79854398-79854417	Msa1128060:three_prime_UTR	40.0%
!	AGTTTTGCCATATCAGGGAT+TGG	-	chr7_3:79854626-79854645	None:intergenic	40.0%
	TGAACTCAACGCAGGCAAAT+TGG	+	chr7_3:79850929-79850948	Msa1128060:five_prime_UTR	45.0%
!	ATGGATTACCGATGGACCAA+AGG	+	chr7_3:79851108-79851127	Msa1128060:CDS	45.0%
	TGTTCAGGCATACGATGATG+AGG	+	chr7_3:79851282-79851301	Msa1128060:intron	45.0%
	TTCGCTTGCCCAGAAATCAA+AGG	+	chr7_3:79851308-79851327	Msa1128060:CDS	45.0%
	GCCAACTGAAAACGTTGATC+TGG	+	chr7_3:79851330-79851349	Msa1128060:CDS	45.0%
	GGTCTTGGCAAACATGAACA+AGG	+	chr7_3:79851442-79851461	Msa1128060:CDS	45.0%
	AGTATTAGGCATCACAGCAG+AGG	-	chr7_3:79851692-79851711	None:intergenic	45.0%
	TCTGCTGTGATGCCTAATAC+TGG	+	chr7_3:79851691-79851710	Msa1128060:intron	45.0%
	GCTGCTGCAATTGCTAAGTA+TGG	+	chr7_3:79851720-79851739	Msa1128060:intron	45.0%
!	TGTTCCTTTTCTGCACGTGA+AGG	-	chr7_3:79851864-79851883	None:intergenic	45.0%
	CGGTATAGTATGTAGCAGGA+TGG	-	chr7_3:79852233-79852252	None:intergenic	45.0%
	TGGCCACAAAAATGGGATAG+CGG	-	chr7_3:79852253-79852272	None:intergenic	45.0%
	TCAAATCCCAAATAGGGGCA+CGG	-	chr7_3:79852281-79852300	None:intergenic	45.0%
!!	GCACTTTGAAGAGCATTAGC+TGG	-	chr7_3:79852397-79852416	None:intergenic	45.0%
!	TAATGCTCTTCAAAGTGCCC+TGG	+	chr7_3:79852399-79852418	Msa1128060:intron	45.0%
!!	GAAAGCATCCCTCCCATATA+TGG	-	chr7_3:79852599-79852618	None:intergenic	45.0%
!!	CGCCGAAAGTACTTTGACTT+TGG	+	chr7_3:79852618-79852637	Msa1128060:intron	45.0%
	GGGATTAGAGATCCAAGACT+AGG	+	chr7_3:79852727-79852746	Msa1128060:CDS	45.0%
!!	TATTGAGTTGGAGGAGACAG+AGG	+	chr7_3:79852816-79852835	Msa1128060:CDS	45.0%
!	CATTTTCTCAAACCTGCACC+TGG	+	chr7_3:79852937-79852956	Msa1128060:intron	45.0%
!	TGCATGCCTTTTTACCGGAT+TGG	+	chr7_3:79852986-79853005	Msa1128060:intron	45.0%
	CGAGGTGAAAGAAATTCGGA+AGG	+	chr7_3:79853146-79853165	Msa1128060:CDS	45.0%
	GCAGCGTCAAGAAAGAGAAT+TGG	+	chr7_3:79853431-79853450	Msa1128060:CDS	45.0%
	GTTCTATGTTGGCCACGTAA+GGG	+	chr7_3:79853537-79853556	Msa1128060:intron	45.0%
	CTGATGCTCAAAAGCAGCAA+CGG	+	chr7_3:79853640-79853659	Msa1128060:CDS	45.0%
	CTTCAACTGCAACAAGAGTC+TGG	+	chr7_3:79853663-79853682	Msa1128060:CDS	45.0%
	TGCTACTGCACTTACAGATC+AGG	+	chr7_3:79853722-79853741	Msa1128060:CDS	45.0%
	ACAGACTCCACAGTAGTAGA+AGG	-	chr7_3:79853839-79853858	None:intergenic	45.0%
!	TGAACCGCAATTGACTCAAC+TGG	+	chr7_3:79854024-79854043	Msa1128060:intron	45.0%
	TACTGGACTAAGCAAGCACT+GGG	-	chr7_3:79854154-79854173	None:intergenic	45.0%
	TAACTCCTGTGGTTTCGGTT+TGG	+	chr7_3:79854403-79854422	Msa1128060:three_prime_UTR	45.0%
	ACATACCAAACCGAAACCAC+AGG	-	chr7_3:79854411-79854430	None:intergenic	45.0%
	AGTTGAGCCAATCCCTGATA+TGG	+	chr7_3:79854616-79854635	Msa1128060:three_prime_UTR	45.0%
	TGCTGCTACCTTTGGTCCAT+CGG	-	chr7_3:79851119-79851138	None:intergenic	50.0%
	AGCATGATTCTTCTGGTGCC+CGG	+	chr7_3:79851163-79851182	Msa1128060:CDS	50.0%
	GGTTGGAAAGGAAAGGGTCT+TGG	+	chr7_3:79851427-79851446	Msa1128060:CDS	50.0%
	TGGCTTTCTGACCACAACGT+GGG	+	chr7_3:79851823-79851842	Msa1128060:intron	50.0%
	AGCTCCTTCACGTGCAGAAA+AGG	+	chr7_3:79851857-79851876	Msa1128060:intron	50.0%
	ATTGTGGTGCATCTTCTCCG+CGG	-	chr7_3:79851926-79851945	None:intergenic	50.0%
	GATGCACCACAATGGCAAGT+AGG	+	chr7_3:79851933-79851952	Msa1128060:intron	50.0%
	GTGTAGCCTACTTGCCATTG+TGG	-	chr7_3:79851942-79851961	None:intergenic	50.0%
!	GGGTGACTGGCCACAAAAAT+GGG	-	chr7_3:79852260-79852279	None:intergenic	50.0%
!	CAAATCCCAAATAGGGGCAC+GGG	-	chr7_3:79852280-79852299	None:intergenic	50.0%
	AGAGATCCAAGACTAGGGGT+CGG	+	chr7_3:79852733-79852752	Msa1128060:CDS	50.0%
	AGGAGACAGAGGAGAATGTG+AGG	+	chr7_3:79852827-79852846	Msa1128060:CDS	50.0%
	CAGAGGAGAATGTGAGGAAG+CGG	+	chr7_3:79852833-79852852	Msa1128060:CDS	50.0%
	AGAGGAGAATGTGAGGAAGC+GGG	+	chr7_3:79852834-79852853	Msa1128060:CDS	50.0%
	ATATGCTGCCTTCTGCTACC+AGG	-	chr7_3:79852958-79852977	None:intergenic	50.0%
	AAATGCATGGCAGCAGTAGC+CGG	+	chr7_3:79853385-79853404	Msa1128060:CDS	50.0%
!!	CTCGCTTTTGCCTATCATCC+CGG	-	chr7_3:79853407-79853426	None:intergenic	50.0%
!	GCTATGGGTGGGTTCTATGT+TGG	+	chr7_3:79853526-79853545	Msa1128060:intron	50.0%
	GGTTCTATGTTGGCCACGTA+AGG	+	chr7_3:79853536-79853555	Msa1128060:intron	50.0%
!!	TGCTAAAGGCACTGCTTCCA+AGG	+	chr7_3:79853776-79853795	Msa1128060:CDS	50.0%
	GATACCAGTTGGACACACCT+TGG	-	chr7_3:79853796-79853815	None:intergenic	50.0%
	AATAACCGCATCAAACCGGC+CGG	+	chr7_3:79853958-79853977	Msa1128060:intron	50.0%
	CCCAATTCAACCGGTTGAAC+CGG	-	chr7_3:79853980-79853999	None:intergenic	50.0%
	CCGGTTCAACCGGTTGAATT+GGG	+	chr7_3:79853977-79853996	Msa1128060:intron	50.0%
	TGGACGGTTCCCAATTCAAC+CGG	-	chr7_3:79853989-79854008	None:intergenic	50.0%
	AAACCACCCAGCAATCTGGA+CGG	-	chr7_3:79854005-79854024	None:intergenic	50.0%
	GTTCAAACCACCCAGCAATC+TGG	-	chr7_3:79854009-79854028	None:intergenic	50.0%
	GTACTGGACTAAGCAAGCAC+TGG	-	chr7_3:79854155-79854174	None:intergenic	50.0%
	AAATGCGCTCTGCGGAAAAG+GGG	-	chr7_3:79854262-79854281	None:intergenic	50.0%
	CAAATGCGCTCTGCGGAAAA+GGG	-	chr7_3:79854263-79854282	None:intergenic	50.0%
	TTGACACCAAATGCGCTCTG+CGG	-	chr7_3:79854270-79854289	None:intergenic	50.0%
	CTCCCAGTGGCCTCTATATT+TGG	+	chr7_3:79854318-79854337	Msa1128060:CDS	50.0%
	AGTCGCAGTGAACTCAACGC+AGG	+	chr7_3:79850921-79850940	Msa1128060:five_prime_UTR	55.0%
	GACTTCCTCACCGTGTCAGA+CGG	-	chr7_3:79850975-79850994	None:intergenic	55.0%
	GCTGCTGTTGCTGCTACCTT+TGG	-	chr7_3:79851127-79851146	None:intergenic	55.0%
	GTGGCTTTCTGACCACAACG+TGG	+	chr7_3:79851822-79851841	Msa1128060:intron	55.0%
	GGCTTTCTGACCACAACGTG+GGG	+	chr7_3:79851824-79851843	Msa1128060:intron	55.0%
	GCGGAGAAGATGCACCACAA+TGG	+	chr7_3:79851925-79851944	Msa1128060:intron	55.0%
!	CGGGTGACTGGCCACAAAAA+TGG	-	chr7_3:79852261-79852280	None:intergenic	55.0%
	AGTCACCCGTGCCCCTATTT+GGG	+	chr7_3:79852272-79852291	Msa1128060:intron	55.0%
	AACCTGCACCTGGTAGCAGA+AGG	+	chr7_3:79852947-79852966	Msa1128060:intron	55.0%
	AATGCATGGCAGCAGTAGCC+GGG	+	chr7_3:79853386-79853405	Msa1128060:CDS	55.0%
	GCTTCCAAGGTGTGTCCAAC+TGG	+	chr7_3:79853789-79853808	Msa1128060:intron	55.0%
!!	TTGAACCGGCCGGTTTGATG+CGG	-	chr7_3:79853966-79853985	None:intergenic	55.0%
!	ATCAAACCGGCCGGTTCAAC+CGG	+	chr7_3:79853967-79853986	Msa1128060:intron	55.0%
	ATTCAACCGGTTGAACCGGC+CGG	-	chr7_3:79853976-79853995	None:intergenic	55.0%
!	GCCGGTTCAACCGGTTGAAT+TGG	+	chr7_3:79853976-79853995	Msa1128060:intron	55.0%
	TTGGGAACCGTCCAGATTGC+TGG	+	chr7_3:79853995-79854014	Msa1128060:intron	55.0%
	TGGGAACCGTCCAGATTGCT+GGG	+	chr7_3:79853996-79854015	Msa1128060:intron	55.0%
!!	GGACTAAGCAAGCACTGGGT+TGG	-	chr7_3:79854150-79854169	None:intergenic	55.0%
	AATGCGCTCTGCGGAAAAGG+GGG	-	chr7_3:79854261-79854280	None:intergenic	55.0%
	CCAAATGCGCTCTGCGGAAA+AGG	-	chr7_3:79854264-79854283	None:intergenic	55.0%
!	CCTTTTCCGCAGAGCGCATT+TGG	+	chr7_3:79854261-79854280	Msa1128060:intron	55.0%
	TGGAAGTCGTTGTCGTCGGC+CGG	+	chr7_3:79850949-79850968	Msa1128060:five_prime_UTR	60.0%
	GACCACAACGTGGGGTTTGC+CGG	+	chr7_3:79851832-79851851	Msa1128060:intron	60.0%
	CTGCACGTGAAGGAGCTCAC+CGG	-	chr7_3:79851854-79851873	None:intergenic	60.0%
!	CAAATAGGGGCACGGGTGAC+TGG	-	chr7_3:79852273-79852292	None:intergenic	60.0%
	CAGTCACCCGTGCCCCTATT+TGG	+	chr7_3:79852271-79852290	Msa1128060:intron	60.0%
	GGTGTCTGCCGTCTTCTTCC+TGG	+	chr7_3:79852308-79852327	Msa1128060:intron	60.0%
	TGCTTGCCGACCCCTAGTCT+TGG	-	chr7_3:79852742-79852761	None:intergenic	60.0%
	GGAGAATGTGAGGAAGCGGG+AGG	+	chr7_3:79852837-79852856	Msa1128060:CDS	60.0%
	TGCCTTCTGCTACCAGGTGC+AGG	-	chr7_3:79852952-79852971	None:intergenic	60.0%
	AGCAGGCAGAAGAAGCCACC+AGG	-	chr7_3:79853071-79853090	None:intergenic	60.0%
	GCAGCAGTAGCCGGGATGAT+AGG	+	chr7_3:79853394-79853413	Msa1128060:CDS	60.0%
	GAACCGTCCAGATTGCTGGG+TGG	+	chr7_3:79853999-79854018	Msa1128060:intron	60.0%
	TCCTCACCGTGTCAGACGGC+CGG	-	chr7_3:79850971-79850990	None:intergenic	65.0%
	CACCGGCAAACCCCACGTTG+TGG	-	chr7_3:79851837-79851856	None:intergenic	65.0%
	CGTCGGCCGGCCGTCTGACA+CGG	+	chr7_3:79850962-79850981	Msa1128060:five_prime_UTR	75.0%
	GCCGGCCGTCTGACACGGTG+AGG	+	chr7_3:79850967-79850986	Msa1128060:intron	75.0%

Chromosome	Type	Strat	End	Strand	Name
chr7_3	gene	79850857	79854755	79850857	ID=Msa1128060;Name=Msa1128060
chr7_3	mRNA	79850857	79854755	79850857	ID=Msa1128060-mRNA-1;Parent=Msa1128060;Name=Msa1128060-mRNA-1;_AED=0.15;_eAED=0.15;_QI=136\|1\|1\|1\|0.85\|0.75\|8\|393\|309
chr7_3	exon	79850857	79850983	79850857	ID=Msa1128060-mRNA-1:exon:22657;Parent=Msa1128060-mRNA-1
chr7_3	exon	79851099	79851209	79851099	ID=Msa1128060-mRNA-1:exon:22658;Parent=Msa1128060-mRNA-1
chr7_3	exon	79851289	79851463	79851289	ID=Msa1128060-mRNA-1:exon:22659;Parent=Msa1128060-mRNA-1
chr7_3	exon	79852704	79852858	79852704	ID=Msa1128060-mRNA-1:exon:22660;Parent=Msa1128060-mRNA-1
chr7_3	exon	79853114	79853257	79853114	ID=Msa1128060-mRNA-1:exon:22661;Parent=Msa1128060-mRNA-1
chr7_3	exon	79853366	79853469	79853366	ID=Msa1128060-mRNA-1:exon:22662;Parent=Msa1128060-mRNA-1
chr7_3	exon	79853638	79853797	79853638	ID=Msa1128060-mRNA-1:exon:22663;Parent=Msa1128060-mRNA-1
chr7_3	exon	79854273	79854755	79854273	ID=Msa1128060-mRNA-1:exon:22664;Parent=Msa1128060-mRNA-1
chr7_3	five_prime_UTR	79850857	79850983	79850857	ID=Msa1128060-mRNA-1:five_prime_utr;Parent=Msa1128060-mRNA-1
chr7_3	five_prime_UTR	79851099	79851107	79851099	ID=Msa1128060-mRNA-1:five_prime_utr;Parent=Msa1128060-mRNA-1
chr7_3	CDS	79851108	79851209	79851108	ID=Msa1128060-mRNA-1:cds;Parent=Msa1128060-mRNA-1
chr7_3	CDS	79851289	79851463	79851289	ID=Msa1128060-mRNA-1:cds;Parent=Msa1128060-mRNA-1
chr7_3	CDS	79852704	79852858	79852704	ID=Msa1128060-mRNA-1:cds;Parent=Msa1128060-mRNA-1
chr7_3	CDS	79853114	79853257	79853114	ID=Msa1128060-mRNA-1:cds;Parent=Msa1128060-mRNA-1
chr7_3	CDS	79853366	79853469	79853366	ID=Msa1128060-mRNA-1:cds;Parent=Msa1128060-mRNA-1
chr7_3	CDS	79853638	79853797	79853638	ID=Msa1128060-mRNA-1:cds;Parent=Msa1128060-mRNA-1
chr7_3	CDS	79854273	79854362	79854273	ID=Msa1128060-mRNA-1:cds;Parent=Msa1128060-mRNA-1
chr7_3	three_prime_UTR	79854363	79854755	79854363	ID=Msa1128060-mRNA-1:three_prime_utr;Parent=Msa1128060-mRNA-1

Gene Sequence

>Msa1128060

ATGGATTACCGATGGACCAAAGGTAGCAGCAACAGCAGCAGCAGCAGCAGTAGTAAGCATGATTCTTCTGGTGCCCGGAGAAACCAATTCAAAAAGGATCAGGCATACGATGATGAGGATTTTCGCTTGCCCAGAAATCAAAGGCCAACTGAAAACGTTGATCTGGATAATGTTGAACAAGCTTCTCTTGACACACACATTACTTCTTCTAATATTGGTTTTAAGCTTCTTCAAAAAATGGGTTGGAAAGGAAAGGGTCTTGGCAAACATGAACAAGGAATTGTTGAACCAATAAAATCTGGGATTAGAGATCCAAGACTAGGGGTCGGCAAGCAAGAAGAAGATGATTTTTTCACTGCAGAAGAAAATGTCCAGCGAAAAAAACTCGATATTGAGTTGGAGGAGACAGAGGAGAATGTGAGGAAGCGGGAGGTGTTAGCTGAACGTGAGCAAAAAATTCAAACCGAGGTGAAAGAAATTCGGAAGGTGTTCTTTTGTGAGCTCTGCAACAAGCAATACAAATTGGCAATGGAGTTTGAAGCACACTTGAGTTCTTATGATCACAATCACAGGAAGCGTTTCAAAGAAATGAAGGAAATGCATGGCAGCAGTAGCCGGGATGATAGGCAAAAGCGAGAACAGCAGCGTCAAGAAAGAGAATTGGCTAAGTTTGCCCAAATTGCTGATGCTCAAAAGCAGCAACGGCTTCAACTGCAACAAGAGTCTGGATCAGCACCAGTTTCAGTTTCCTCTGAATCTAAGACTGCTACTGCACTTACAGATCAGGAGCAGCGAAATACTTTGAAGTTTGGGTTTTCTGCTAAAGGCACTGCTTCCAAGAGCGCATTTGGTGTCAAGAAGCAAAATGTTCCAAAGAAGCAAAATCTCCCAGTGGCCTCTATATTTGGAAACGATAGCGATGAAGAGTGA

Protein sequence

>Msa1128060

MDYRWTKGSSNSSSSSSSKHDSSGARRNQFKKDQAYDDEDFRLPRNQRPTENVDLDNVEQASLDTHITSSNIGFKLLQKMGWKGKGLGKHEQGIVEPIKSGIRDPRLGVGKQEEDDFFTAEENVQRKKLDIELEETEENVRKREVLAEREQKIQTEVKEIRKVFFCELCNKQYKLAMEFEAHLSSYDHNHRKRFKEMKEMHGSSSRDDRQKREQQRQERELAKFAQIADAQKQQRLQLQQESGSAPVSVSSESKTATALTDQEQRNTLKFGFSAKGTASKSAFGVKKQNVPKKQNLPVASIFGNDSDEE*