Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1030950 | XP_003624513.1 | 97.297 | 259 | 7 | 0 | 1 | 259 | 1 | 259 | 0.0 | 523 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1030950 | sp|Q9LSE4|CCB1_ARATH | 79.695 | 197 | 39 | 1 | 63 | 258 | 68 | 264 | 5.47e-111 | 323 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1030950 | G7KXA7 | 97.297 | 259 | 7 | 0 | 1 | 259 | 1 | 259 | 0.0 | 523 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0011540 | Msa1030950 | 0.818356 | 2.045715e-52 | -8.615850e-47 |
| Msa0015720 | Msa1030950 | 0.805597 | 1.236343e-49 | -8.615850e-47 |
| Msa0018610 | Msa1030950 | 0.812825 | 3.489327e-51 | -8.615850e-47 |
| Msa0019540 | Msa1030950 | -0.809395 | 1.932757e-50 | -8.615850e-47 |
| Msa0042210 | Msa1030950 | 0.804641 | 1.959895e-49 | -8.615850e-47 |
| Msa0046800 | Msa1030950 | 0.802373 | 5.784477e-49 | -8.615850e-47 |
| Msa0067600 | Msa1030950 | 0.801289 | 9.658502e-49 | -8.615850e-47 |
| Msa0108490 | Msa1030950 | 0.841768 | 3.888833e-58 | -8.615850e-47 |
| Msa0606230 | Msa1030950 | 0.824073 | 9.834522e-54 | -8.615850e-47 |
| Msa0620050 | Msa1030950 | 0.802624 | 5.136343e-49 | -8.615850e-47 |
| Msa0624260 | Msa1030950 | 0.809924 | 1.487453e-50 | -8.615850e-47 |
| Msa0624360 | Msa1030950 | 0.800104 | 1.685171e-48 | -8.615850e-47 |
| Msa0657060 | Msa1030950 | 0.813909 | 2.016063e-51 | -8.615850e-47 |
| Msa0704720 | Msa1030950 | 0.802035 | 6.792189e-49 | -8.615850e-47 |
| Msa0711860 | Msa1030950 | 0.810683 | 1.020147e-50 | -8.615850e-47 |
| Msa0797070 | Msa1030950 | 0.804390 | 2.210537e-49 | -8.615850e-47 |
| Msa0799150 | Msa1030950 | 0.834017 | 3.821753e-56 | -8.615850e-47 |
| Msa0808500 | Msa1030950 | 0.800949 | 1.133614e-48 | -8.615850e-47 |
| Msa0156260 | Msa1030950 | 0.819067 | 1.411175e-52 | -8.615850e-47 |
| Msa0164790 | Msa1030950 | 0.816400 | 5.638931e-52 | -8.615850e-47 |
| Msa0168470 | Msa1030950 | 0.822322 | 2.520238e-53 | -8.615850e-47 |
| Msa0182610 | Msa1030950 | 0.821156 | 4.690265e-53 | -8.615850e-47 |
| Msa0182940 | Msa1030950 | 0.806154 | 9.438902e-50 | -8.615850e-47 |
| Msa0185540 | Msa1030950 | 0.817326 | 3.495098e-52 | -8.615850e-47 |
| Msa0224180 | Msa1030950 | 0.828042 | 1.120288e-54 | -8.615850e-47 |
| Msa0374300 | Msa1030950 | 0.819253 | 1.279913e-52 | -8.615850e-47 |
| Msa0374400 | Msa1030950 | 0.816783 | 4.628207e-52 | -8.615850e-47 |
| Msa0379360 | Msa1030950 | 0.816166 | 6.361863e-52 | -8.615850e-47 |
| Msa0386280 | Msa1030950 | 0.810442 | 1.150560e-50 | -8.615850e-47 |
| Msa0390760 | Msa1030950 | 0.827382 | 1.613917e-54 | -8.615850e-47 |
| Msa0400890 | Msa1030950 | 0.800287 | 1.547192e-48 | -8.615850e-47 |
| Msa0450390 | Msa1030950 | 0.870028 | 1.988218e-66 | -8.615850e-47 |
| Msa0469700 | Msa1030950 | 0.810473 | 1.132689e-50 | -8.615850e-47 |
| Msa0471070 | Msa1030950 | -0.802920 | 4.460833e-49 | -8.615850e-47 |
| Msa0476140 | Msa1030950 | 0.830142 | 3.469029e-55 | -8.615850e-47 |
| Msa1013560 | Msa1030950 | 0.806554 | 7.776266e-50 | -8.615850e-47 |
| Msa1030950 | Msa1052800 | 0.823099 | 1.661891e-53 | -8.615850e-47 |
| Msa1030950 | Msa1082640 | 0.881139 | 3.076797e-70 | -8.615850e-47 |
| Msa1030950 | Msa1131300 | 0.805152 | 1.532379e-49 | -8.615850e-47 |
| Msa1030950 | Msa1163230 | 0.825733 | 3.991107e-54 | -8.615850e-47 |
| Msa1030950 | Msa1190300 | 0.815701 | 8.077803e-52 | -8.615850e-47 |
| Msa1030950 | Msa1244770 | 0.802348 | 5.853705e-49 | -8.615850e-47 |
| Msa1030950 | Msa1244940 | 0.806921 | 6.503211e-50 | -8.615850e-47 |
| Msa1030950 | Msa1278120 | 0.851014 | 1.169361e-60 | -8.615850e-47 |
| Msa1030950 | Msa1359950 | 0.802522 | 5.390369e-49 | -8.615850e-47 |
| Msa1030950 | Msa1375120 | 0.805765 | 1.139507e-49 | -8.615850e-47 |
| Msa1030950 | Msa1403590 | 0.815462 | 9.132281e-52 | -8.615850e-47 |
| Msa1030950 | Msa1419760 | 0.821896 | 3.163252e-53 | -8.615850e-47 |
| Msa0270230 | Msa1030950 | 0.802754 | 4.828510e-49 | -8.615850e-47 |
| Msa0293000 | Msa1030950 | 0.812363 | 4.401725e-51 | -8.615850e-47 |
| Msa0294170 | Msa1030950 | 0.811505 | 6.771417e-51 | -8.615850e-47 |
| Msa0307460 | Msa1030950 | 0.800732 | 1.255483e-48 | -8.615850e-47 |
| Msa0307820 | Msa1030950 | 0.807687 | 4.474922e-50 | -8.615850e-47 |
| Msa0322480 | Msa1030950 | 0.828316 | 9.620481e-55 | -8.615850e-47 |
| Msa0490200 | Msa1030950 | 0.802273 | 6.067227e-49 | -8.615850e-47 |
| Msa0514630 | Msa1030950 | 0.823267 | 1.518815e-53 | -8.615850e-47 |
| Msa0515530 | Msa1030950 | 0.823503 | 1.337115e-53 | -8.615850e-47 |
| Msa0515580 | Msa1030950 | 0.815410 | 9.377081e-52 | -8.615850e-47 |
| Msa0562040 | Msa1030950 | 0.811445 | 6.976535e-51 | -8.615850e-47 |
| Msa0577110 | Msa1030950 | 0.808747 | 2.660387e-50 | -8.615850e-47 |
| Msa0598080 | Msa1030950 | 0.829126 | 6.129127e-55 | -8.615850e-47 |
| Msa0598980 | Msa1030950 | 0.823768 | 1.159469e-53 | -8.615850e-47 |
| Msa0931410 | Msa1030950 | 0.822155 | 2.756180e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1030950 | MtrunA17_Chr7g0252271 | 97.297 | 259 | 7 | 0 | 1 | 259 | 1 | 259 | 0.0 | 523 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1030950 | AT3G26710.1 | 79.695 | 197 | 39 | 1 | 63 | 258 | 68 | 264 | 5.56e-112 | 323 |
Find 155 sgRNAs with CRISPR-Local
Find 216 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACTTTAACTTGCTCCTTTC+TGG | 0.008598 | 7_1:+65216368 | None:intergenic |
| GGATCTCATTATGATATTTC+TGG | 0.147844 | 7_1:+65215525 | None:intergenic |
| AAACGAAGTTTCTTTGGTTT+TGG | 0.222781 | 7_1:+65217700 | None:intergenic |
| GAAACAGTTGCAGGAATTTC+AGG | 0.237158 | 7_1:-65215036 | Msa1030950:three_prime_UTR |
| ATGATATTTCTGGCAGAATT+AGG | 0.242646 | 7_1:+65215535 | None:intergenic |
| TTATCTCTGTTCCTGGTCTT+TGG | 0.246420 | 7_1:-65217546 | Msa1030950:CDS |
| TGCCGGATGTTGGCAATAAT+TGG | 0.247297 | 7_1:-65216552 | Msa1030950:CDS |
| TGGAAATCTGCTTAGCAAAT+AGG | 0.273649 | 7_1:+65215913 | None:intergenic |
| AAGGGCATGGTTTATGTTAA+AGG | 0.273810 | 7_1:-65216246 | Msa1030950:CDS |
| TTCTCATTTGCTCGACTTGT+TGG | 0.274703 | 7_1:+65216289 | None:intergenic |
| TATAGATGAAGGTGGAAATA+AGG | 0.285189 | 7_1:-65217394 | Msa1030950:CDS |
| GGTACCAACTTATTCATTCT+TGG | 0.306788 | 7_1:+65215584 | None:intergenic |
| TATGCAGAGGAGCTTATTAC+TGG | 0.309200 | 7_1:-65216401 | Msa1030950:intron |
| AACAGATGACGATGTGAAAT+TGG | 0.317786 | 7_1:+65215344 | None:intergenic |
| GATCGGTGTTTGCACACATC+TGG | 0.323690 | 7_1:+65215446 | None:intergenic |
| CTCCGAATTTCAAGTATGTT+TGG | 0.327058 | 7_1:+65215766 | None:intergenic |
| TTCGCATACTTTGTCCTAAC+AGG | 0.331271 | 7_1:+65215144 | None:intergenic |
| AGGGATAAACGAAGTTTCTT+TGG | 0.332452 | 7_1:+65217694 | None:intergenic |
| ATCATATCATAAATTACATT+TGG | 0.332883 | 7_1:+65215893 | None:intergenic |
| AGAGACTACTGGTTACTCTT+TGG | 0.348247 | 7_1:-65217599 | Msa1030950:CDS |
| TGTAAGTAACAAGAGAGAAT+TGG | 0.349828 | 7_1:+65217621 | None:intergenic |
| CAACATGTTCAATGGCTACT+TGG | 0.358770 | 7_1:-65215998 | Msa1030950:three_prime_UTR |
| GGGACCTGCACCATACAATT+TGG | 0.359660 | 7_1:+65215560 | None:intergenic |
| GCTAGTTATTATACTTCTCT+TGG | 0.366409 | 7_1:-65217577 | Msa1030950:CDS |
| CGCCAAACATACTTGAAATT+CGG | 0.375232 | 7_1:-65215768 | Msa1030950:three_prime_UTR |
| GCCAACATCCGGCACGGTTA+TGG | 0.378017 | 7_1:+65216561 | None:intergenic |
| TCTTGTAGTACATCCTGTTC+TGG | 0.379842 | 7_1:+65216198 | None:intergenic |
| TGCATTCCCTTGCCAAATGC+TGG | 0.381560 | 7_1:+65215471 | None:intergenic |
| ATGTTGGCAATAATTGGTTT+TGG | 0.387394 | 7_1:-65216546 | Msa1030950:CDS |
| CCGCCAAAGTCTCCAGCATT+TGG | 0.391956 | 7_1:-65215483 | Msa1030950:three_prime_UTR |
| AGAGGGAGATGGTGTGGATG+TGG | 0.397897 | 7_1:+65217784 | None:intergenic |
| GGAACTCAAGTTTAGTGAAA+AGG | 0.402521 | 7_1:-65216265 | Msa1030950:CDS |
| GGTTTACCAGTTGGATTTAA+CGG | 0.402953 | 7_1:+65217869 | None:intergenic |
| TCATATACAATCTTTGAAGA+TGG | 0.405797 | 7_1:-65215072 | Msa1030950:three_prime_UTR |
| GTAAGTAACAAGAGAGAATT+GGG | 0.407638 | 7_1:+65217622 | None:intergenic |
| TTAACAGCAGAAACAGTTGC+AGG | 0.410008 | 7_1:-65215045 | Msa1030950:three_prime_UTR |
| TTTCTTCTATGAAGGTTTGA+AGG | 0.411553 | 7_1:-65216667 | Msa1030950:intron |
| AACAAATAATAAAGATTCTC+AGG | 0.415954 | 7_1:-65215719 | Msa1030950:three_prime_UTR |
| TTGCCAAATGCTGGAGACTT+TGG | 0.416842 | 7_1:+65215480 | None:intergenic |
| AAGGCACCAAGTCAAGTTGC+AGG | 0.418457 | 7_1:-65217375 | Msa1030950:CDS |
| GCCCTCTTGCTTGGATCACC+AGG | 0.425512 | 7_1:-65215120 | Msa1030950:three_prime_UTR |
| TGGGATTTAATAGTTGTTGT+TGG | 0.429033 | 7_1:+65217641 | None:intergenic |
| CTGCCATGAGTGTAGTTTGT+TGG | 0.432672 | 7_1:+65217741 | None:intergenic |
| GTTGATCGGTTAAAGACCTT+GGG | 0.438975 | 7_1:+65215620 | None:intergenic |
| TAAAAGCTGATGATGACTTC+AGG | 0.441229 | 7_1:+65215847 | None:intergenic |
| TATGCGAATGCCCTCTTGCT+TGG | 0.442545 | 7_1:-65215129 | Msa1030950:three_prime_UTR |
| AACTTTGCAGTGGTTGATAG+AGG | 0.442912 | 7_1:-65217324 | Msa1030950:CDS |
| TTGTCAGAAATCGTTGTTCA+AGG | 0.452015 | 7_1:-65216318 | Msa1030950:CDS |
| AAACAAACCTTCCACCTGTT+AGG | 0.452175 | 7_1:-65215158 | Msa1030950:three_prime_UTR |
| AATGGATATGGAGAAGATGA+TGG | 0.454233 | 7_1:+65217847 | None:intergenic |
| ACCTCCCCTGCAACTTGACT+TGG | 0.456506 | 7_1:+65217369 | None:intergenic |
| CCAAATGCTGGAGACTTTGG+CGG | 0.457248 | 7_1:+65215483 | None:intergenic |
| GAAGAGAACGGAGAGGGAGA+TGG | 0.458645 | 7_1:+65217773 | None:intergenic |
| GTGGAAAGCCAGTATTCATC+AGG | 0.460050 | 7_1:+65215316 | None:intergenic |
| CGATCACAACGAGCCATTCT+GGG | 0.462447 | 7_1:-65215428 | Msa1030950:three_prime_UTR |
| GCTCAGCATGTCCGCAAGTA+AGG | 0.463109 | 7_1:+65215218 | None:intergenic |
| GAACTCAAGTTTAGTGAAAA+GGG | 0.464874 | 7_1:-65216264 | Msa1030950:CDS |
| TTAGCAAATAGGCGTGCTAT+TGG | 0.465412 | 7_1:+65215924 | None:intergenic |
| AGCATCATCTTGGCAGCCAT+TGG | 0.466070 | 7_1:+65217814 | None:intergenic |
| TCTAGACCGTTAAATCCAAC+TGG | 0.470518 | 7_1:-65217875 | Msa1030950:five_prime_UTR |
| GTTAACCATCTTAAGTCCAT+TGG | 0.471533 | 7_1:-65216524 | Msa1030950:CDS |
| ACCTCCAAATTGTATGGTGC+AGG | 0.482330 | 7_1:-65215564 | Msa1030950:three_prime_UTR |
| TTACGCCAATGGACTTAAGA+TGG | 0.483906 | 7_1:+65216519 | None:intergenic |
| GTTCTGCGCCTGATGAATAC+TGG | 0.484039 | 7_1:-65215324 | Msa1030950:three_prime_UTR |
| CAAACTTGAGGACAAGTAAA+CGG | 0.484302 | 7_1:-65215194 | Msa1030950:three_prime_UTR |
| GAGGGAGATGGTGTGGATGT+GGG | 0.487288 | 7_1:+65217785 | None:intergenic |
| TGTTGATCGGTTAAAGACCT+TGG | 0.487515 | 7_1:+65215619 | None:intergenic |
| AAGGAGTGATGGTTCCCAGC+AGG | 0.487689 | 7_1:-65216648 | Msa1030950:CDS |
| CACCAGGAGGAAACCGTTCA+TGG | 0.490179 | 7_1:-65215104 | Msa1030950:three_prime_UTR |
| AAGATGATGGGTTTACCAGT+TGG | 0.490440 | 7_1:+65217860 | None:intergenic |
| AACCAATTATTGCCAACATC+CGG | 0.490534 | 7_1:+65216550 | None:intergenic |
| AAAATGATAGTTAAAGAAGA+TGG | 0.490576 | 7_1:-65216345 | Msa1030950:CDS |
| GTTGGTACCTCCAAATTGTA+TGG | 0.490642 | 7_1:-65215570 | Msa1030950:three_prime_UTR |
| ACCATAACCGTGCCGGATGT+TGG | 0.492740 | 7_1:-65216562 | Msa1030950:CDS |
| AGTAGTGCCTGGCTCAATGC+TGG | 0.496319 | 7_1:-65215277 | Msa1030950:three_prime_UTR |
| ATCATATACAACATGTTCAA+TGG | 0.499085 | 7_1:-65216006 | Msa1030950:three_prime_UTR |
| ACCAACTTATTCATTCTTGG+AGG | 0.499770 | 7_1:+65215587 | None:intergenic |
| AAATGCGCCATGGACATACT+TGG | 0.503500 | 7_1:+65215696 | None:intergenic |
| TCCTCCAAGAATGAATAAGT+TGG | 0.514284 | 7_1:-65215588 | Msa1030950:three_prime_UTR |
| TGGGGACAACAGCATCATCT+TGG | 0.515410 | 7_1:+65217804 | None:intergenic |
| AGGGAGATGGTGTGGATGTG+GGG | 0.515801 | 7_1:+65217786 | None:intergenic |
| GGATGTACTACAAGAATGAA+TGG | 0.518925 | 7_1:-65216190 | Msa1030950:three_prime_UTR |
| AAGTAAGGATGTTCTTGCTA+TGG | 0.519506 | 7_1:+65215233 | None:intergenic |
| AACCATGAACGGTTTCCTCC+TGG | 0.520987 | 7_1:+65215102 | None:intergenic |
| TTGTTACTTACAGAGACTAC+TGG | 0.521171 | 7_1:-65217610 | Msa1030950:CDS |
| TTTCTGCACTTGCATCAGCC+TGG | 0.522655 | 7_1:-65216605 | Msa1030950:CDS |
| GAACGGAGAGGGAGATGGTG+TGG | 0.523786 | 7_1:+65217778 | None:intergenic |
| AATGCCTTCACTTACGCCAA+TGG | 0.524915 | 7_1:+65216508 | None:intergenic |
| GAGGAAAACAAGTTGTTGAT+CGG | 0.524976 | 7_1:+65215606 | None:intergenic |
| CAAGTTTAGTGAAAAGGGCA+TGG | 0.525721 | 7_1:-65216259 | Msa1030950:CDS |
| AAATAAGCTATGTTTCGAAA+AGG | 0.526930 | 7_1:+65216223 | None:intergenic |
| GAAGTGGAAGAGAACGGAGA+GGG | 0.529733 | 7_1:+65217767 | None:intergenic |
| CGAATATCAAAACTTTCAGC+AGG | 0.533525 | 7_1:+65216098 | None:intergenic |
| TGGAGTGAAGTGGAAGAGAA+CGG | 0.534314 | 7_1:+65217761 | None:intergenic |
| ATGAAGGTTTGAAGGAGTGA+TGG | 0.536342 | 7_1:-65216659 | Msa1030950:intron |
| CCAGAATGGCTCGTTGTGAT+CGG | 0.536344 | 7_1:+65215429 | None:intergenic |
| ATCGGTGTTTGCACACATCT+GGG | 0.542075 | 7_1:+65215447 | None:intergenic |
| TGTAGTTTGTTGGAGTGAAG+TGG | 0.546339 | 7_1:+65217751 | None:intergenic |
| GATCTGTCCAGCATTGAGCC+AGG | 0.548945 | 7_1:+65215270 | None:intergenic |
| GCACTACTGTCACTGTTAAG+TGG | 0.549316 | 7_1:+65215292 | None:intergenic |
| ATGGATATGGAGAAGATGAT+GGG | 0.549721 | 7_1:+65217848 | None:intergenic |
| ATAATGTTCTAAAGTGAACT+AGG | 0.552989 | 7_1:+65216066 | None:intergenic |
| TATTTCTGGCAGAATTAGGA+AGG | 0.553507 | 7_1:+65215539 | None:intergenic |
| AGGAGTGATGGTTCCCAGCA+GGG | 0.555627 | 7_1:-65216647 | Msa1030950:CDS |
| CTCTCTCAGAATCTTGCTGA+GGG | 0.558977 | 7_1:-65215398 | Msa1030950:three_prime_UTR |
| GCACAAGGGAAACACTTGCC+AGG | 0.561065 | 7_1:+65216587 | None:intergenic |
| ATGCTGGAGACTTTGGCGGA+TGG | 0.561425 | 7_1:+65215487 | None:intergenic |
| ACAAGTCGAGCAAATGAGAA+AGG | 0.564418 | 7_1:-65216286 | Msa1030950:CDS |
| TTGGCAAACAGTGTTGATGT+TGG | 0.567703 | 7_1:+65215363 | None:intergenic |
| TACTCGTAATAACTTTGCAG+TGG | 0.569315 | 7_1:-65217334 | Msa1030950:CDS |
| GCACGGTTATGGTGAGCACA+AGG | 0.570393 | 7_1:+65216572 | None:intergenic |
| ACTCTCTCAGAATCTTGCTG+AGG | 0.573430 | 7_1:-65215399 | Msa1030950:three_prime_UTR |
| ACCAAGTCAAGTTGCAGGGG+AGG | 0.579868 | 7_1:-65217370 | Msa1030950:CDS |
| GGAGTGATGGTTCCCAGCAG+GGG | 0.585564 | 7_1:-65216646 | Msa1030950:CDS |
| AGGCACCAAGTCAAGTTGCA+GGG | 0.588262 | 7_1:-65217374 | Msa1030950:CDS |
| TTAACAGTGACAGTAGTGCC+TGG | 0.588903 | 7_1:-65215288 | Msa1030950:three_prime_UTR |
| GCATACTTTGTCCTAACAGG+TGG | 0.589727 | 7_1:+65215147 | None:intergenic |
| TGTGCTCACCATAACCGTGC+CGG | 0.593329 | 7_1:-65216569 | Msa1030950:CDS |
| GAATTCAGCACTCTCGTGAA+GGG | 0.593669 | 7_1:+65217675 | None:intergenic |
| ACTGTCACTGTTAAGTGGCG+TGG | 0.593737 | 7_1:+65215297 | None:intergenic |
| TCCATTCTCTGCAAAACCAA+TGG | 0.596591 | 7_1:-65217830 | Msa1030950:exon |
| CAAACGTTCTGTCAAATCCA+AGG | 0.596958 | 7_1:-65217515 | Msa1030950:intron |
| TCATAATGAGATCCATGACA+TGG | 0.597841 | 7_1:-65215516 | Msa1030950:three_prime_UTR |
| TTCCACTAGTGAGCAGCCCA+AGG | 0.599328 | 7_1:-65215636 | Msa1030950:three_prime_UTR |
| ACTCCAACAAACTACACTCA+TGG | 0.600149 | 7_1:-65217744 | Msa1030950:CDS |
| ATGATGAACACAACCATGAA+CGG | 0.601838 | 7_1:+65215091 | None:intergenic |
| TTGAACAACGATTTCTGACA+AGG | 0.602980 | 7_1:+65216320 | None:intergenic |
| TCTCAGGCCAAGTATGTCCA+TGG | 0.606329 | 7_1:-65215703 | Msa1030950:three_prime_UTR |
| TGAATTCAGCACTCTCGTGA+AGG | 0.606564 | 7_1:+65217674 | None:intergenic |
| AAAGTCTCCAGCATTTGGCA+AGG | 0.607108 | 7_1:-65215478 | Msa1030950:three_prime_UTR |
| ACTTTGTCCTAACAGGTGGA+AGG | 0.607644 | 7_1:+65215151 | None:intergenic |
| AGTGACTCAGTAGCAAAACC+TGG | 0.607734 | 7_1:-65214985 | None:intergenic |
| TTGATGAGAGACCAAAGACC+AGG | 0.611561 | 7_1:+65217535 | None:intergenic |
| AGAGAGTCAAGAACCCAGAA+TGG | 0.614301 | 7_1:+65215415 | None:intergenic |
| TGAAGTGGAAGAGAACGGAG+AGG | 0.617407 | 7_1:+65217766 | None:intergenic |
| ACCTGCACCATACAATTTGG+AGG | 0.619569 | 7_1:+65215563 | None:intergenic |
| GATAATGTCGAAATGCGCCA+TGG | 0.622811 | 7_1:+65215686 | None:intergenic |
| CTGGACTCGAGCATCCAGAA+AGG | 0.624164 | 7_1:-65216382 | Msa1030950:CDS |
| ACATGCTGAGCACAAACTTG+AGG | 0.627184 | 7_1:-65215206 | Msa1030950:three_prime_UTR |
| ATTATTGCCAACATCCGGCA+CGG | 0.632668 | 7_1:+65216555 | None:intergenic |
| AGCAAGAACATCCTTACTTG+CGG | 0.635054 | 7_1:-65215229 | Msa1030950:three_prime_UTR |
| AAGTCTCCAGCATTTGGCAA+GGG | 0.635128 | 7_1:-65215477 | Msa1030950:three_prime_UTR |
| GGCACCAAGTCAAGTTGCAG+GGG | 0.636681 | 7_1:-65217373 | Msa1030950:CDS |
| ATTTCTGGCAGAATTAGGAA+GGG | 0.638657 | 7_1:+65215540 | None:intergenic |
| GAGTGATGGTTCCCAGCAGG+GGG | 0.640157 | 7_1:-65216645 | Msa1030950:CDS |
| CTCCTGGTGATCCAAGCAAG+AGG | 0.642258 | 7_1:+65215118 | None:intergenic |
| TAAAGTGAACTAGGTGCCTG+AGG | 0.645372 | 7_1:+65216075 | None:intergenic |
| AAGCAGCCACGGCTAAACAC+AGG | 0.652533 | 7_1:-65216153 | Msa1030950:three_prime_UTR |
| TCCTGGTGATCCAAGCAAGA+GGG | 0.654973 | 7_1:+65215119 | None:intergenic |
| CATAATGAGATCCATGACAT+GGG | 0.657346 | 7_1:-65215515 | Msa1030950:three_prime_UTR |
| GACAAGTAAACGGATCAAAG+AGG | 0.665826 | 7_1:-65215184 | Msa1030950:three_prime_UTR |
| CACGGTTATGGTGAGCACAA+GGG | 0.668400 | 7_1:+65216573 | None:intergenic |
| CTCTTGCTTGGATCACCAGG+AGG | 0.672619 | 7_1:-65215117 | Msa1030950:three_prime_UTR |
| CATATGCCTGTGTTTAGCCG+TGG | 0.700828 | 7_1:+65216147 | None:intergenic |
| TGTACTACAAGAATGAATGG+AGG | 0.720850 | 7_1:-65216187 | Msa1030950:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCAAAAAAAAAAAAAAAAAG+TGG | + | chr7_1:65215419-65215438 | None:intergenic | 10.0% |
| !! | TAATGACATTAATAACTAAA+TGG | + | chr7_1:65216089-65216108 | None:intergenic | 15.0% |
| !! | ATCATATCATAAATTACATT+TGG | + | chr7_1:65216987-65217006 | None:intergenic | 15.0% |
| !!! | CCAAAATATTTTTGATTATT+TGG | + | chr7_1:65217216-65217235 | None:intergenic | 15.0% |
| !!! | CCAAATAATCAAAAATATTT+TGG | - | chr7_1:65217213-65217232 | Msa1030950:intron | 15.0% |
| !!! | TCTTTTACAACATTAAAGAT+TGG | + | chr7_1:65216000-65216019 | None:intergenic | 20.0% |
| !! | ATATGTTAACACCAAATAAT+GGG | + | chr7_1:65216050-65216069 | None:intergenic | 20.0% |
| !! | ATTAATTAAGAGGCAAAAAT+AGG | + | chr7_1:65216148-65216167 | None:intergenic | 20.0% |
| !! | AAAATGATAGTTAAAGAAGA+TGG | - | chr7_1:65216532-65216551 | Msa1030950:CDS | 20.0% |
| !! | AAATTGTAAACAAAAAAGTC+AGG | - | chr7_1:65217067-65217086 | Msa1030950:intron | 20.0% |
| !! | AACAAATAATAAAGATTCTC+AGG | - | chr7_1:65217158-65217177 | Msa1030950:intron | 20.0% |
| ! | AATGAATGAATGAATTACCT+TGG | + | chr7_1:65215382-65215401 | None:intergenic | 25.0% |
| !! | AAGAAGACTTTTATAGATGA+AGG | - | chr7_1:65215472-65215491 | Msa1030950:three_prime_UTR | 25.0% |
| ! | CAATTAAAGAGAGAATGTAA+TGG | + | chr7_1:65215599-65215618 | None:intergenic | 25.0% |
| ! | AATGATCAATAGAAGATGTT+TGG | - | chr7_1:65215637-65215656 | Msa1030950:three_prime_UTR | 25.0% |
| !!! | TACTCATTGCATTTAATTTG+TGG | + | chr7_1:65215666-65215685 | None:intergenic | 25.0% |
| ! | TCATTAAGTTACTAGAATGA+GGG | + | chr7_1:65215878-65215897 | None:intergenic | 25.0% |
| !! | AATCGAATTTTTACGTTCTT+TGG | - | chr7_1:65215914-65215933 | Msa1030950:three_prime_UTR | 25.0% |
| !!! | ACATTAAAGATTGGCTTAAT+TGG | + | chr7_1:65215991-65216010 | None:intergenic | 25.0% |
| !! | ACATAGAGACTTTTGATAAA+TGG | + | chr7_1:65216024-65216043 | None:intergenic | 25.0% |
| ! | GATATGTTAACACCAAATAA+TGG | + | chr7_1:65216051-65216070 | None:intergenic | 25.0% |
| ! | TGACGTAATGATTAATTAAG+AGG | + | chr7_1:65216158-65216177 | None:intergenic | 25.0% |
| !!! | TTTTTCTGTTTCTTCTATGA+AGG | - | chr7_1:65216202-65216221 | Msa1030950:three_prime_UTR | 25.0% |
| ! | AAATAAGCTATGTTTCGAAA+AGG | + | chr7_1:65216657-65216676 | None:intergenic | 25.0% |
| !!! | ATAATGTTCTAAAGTGAACT+AGG | + | chr7_1:65216814-65216833 | None:intergenic | 25.0% |
| !!! | CATTATGATTCTTACTTTTG+AGG | - | chr7_1:65216828-65216847 | Msa1030950:intron | 25.0% |
| ! | ATCATATACAACATGTTCAA+TGG | - | chr7_1:65216871-65216890 | Msa1030950:intron | 25.0% |
| !! | TCATATACAATCTTTGAAGA+TGG | - | chr7_1:65217805-65217824 | Msa1030950:CDS | 25.0% |
| !!! | TCTTTGGTTTTGGATTTTGA+AGG | + | chr7_1:65215170-65215189 | None:intergenic | 30.0% |
| !! | AAACGAAGTTTCTTTGGTTT+TGG | + | chr7_1:65215180-65215199 | None:intergenic | 30.0% |
| TGGGATTTAATAGTTGTTGT+TGG | + | chr7_1:65215239-65215258 | None:intergenic | 30.0% | |
| GTAAGTAACAAGAGAGAATT+GGG | + | chr7_1:65215258-65215277 | None:intergenic | 30.0% | |
| TGTAAGTAACAAGAGAGAAT+TGG | + | chr7_1:65215259-65215278 | None:intergenic | 30.0% | |
| GCTAGTTATTATACTTCTCT+TGG | - | chr7_1:65215300-65215319 | Msa1030950:three_prime_UTR | 30.0% | |
| ! | TTGACAATTTCGTGCTTTTA+TGG | - | chr7_1:65215435-65215454 | Msa1030950:three_prime_UTR | 30.0% |
| ! | AAGACTTTTATAGATGAAGG+TGG | - | chr7_1:65215475-65215494 | Msa1030950:three_prime_UTR | 30.0% |
| TATAGATGAAGGTGGAAATA+AGG | - | chr7_1:65215483-65215502 | Msa1030950:three_prime_UTR | 30.0% | |
| TATTGATCATTGCAAAAGCA+AGG | + | chr7_1:65215628-65215647 | None:intergenic | 30.0% | |
| TTGCTTATAATGAAGTCTAG+AGG | - | chr7_1:65215697-65215716 | Msa1030950:three_prime_UTR | 30.0% | |
| TGCTTATAATGAAGTCTAGA+GGG | - | chr7_1:65215698-65215717 | Msa1030950:three_prime_UTR | 30.0% | |
| GATTTCACCAATGCTTAAAA+TGG | + | chr7_1:65215728-65215747 | None:intergenic | 30.0% | |
| CAAGTTAAATGTTCTAACCA+TGG | - | chr7_1:65215751-65215770 | Msa1030950:three_prime_UTR | 30.0% | |
| !!! | GAATGAGGGTTTTTTGAATT+CGG | + | chr7_1:65215864-65215883 | None:intergenic | 30.0% |
| GTCATTAAGTTACTAGAATG+AGG | + | chr7_1:65215879-65215898 | None:intergenic | 30.0% | |
| TACTAACCAAATCTTTGCAT+AGG | - | chr7_1:65215947-65215966 | Msa1030950:three_prime_UTR | 30.0% | |
| TTTCTTCTATGAAGGTTTGA+AGG | - | chr7_1:65216210-65216229 | Msa1030950:three_prime_UTR | 30.0% | |
| !! | ATGTTGGCAATAATTGGTTT+TGG | - | chr7_1:65216331-65216350 | Msa1030950:CDS | 30.0% |
| GAACTCAAGTTTAGTGAAAA+GGG | - | chr7_1:65216613-65216632 | Msa1030950:CDS | 30.0% | |
| !!! | ATAGCTTATTTTACCAGAAC+AGG | - | chr7_1:65216666-65216685 | Msa1030950:intron | 30.0% |
| !! | ATGATATTTCTGGCAGAATT+AGG | + | chr7_1:65217345-65217364 | None:intergenic | 30.0% |
| GGATCTCATTATGATATTTC+TGG | + | chr7_1:65217355-65217374 | None:intergenic | 30.0% | |
| !!! | TAATGCTGTTTTCTTTTGTG+TGG | - | chr7_1:65217866-65217885 | Msa1030950:five_prime_UTR | 30.0% |
| GGTTTACCAGTTGGATTTAA+CGG | + | chr7_1:65215011-65215030 | None:intergenic | 35.0% | |
| ATGGATATGGAGAAGATGAT+GGG | + | chr7_1:65215032-65215051 | None:intergenic | 35.0% | |
| AATGGATATGGAGAAGATGA+TGG | + | chr7_1:65215033-65215052 | None:intergenic | 35.0% | |
| !!! | TTGGTTTTGGATTTTGAAGG+TGG | + | chr7_1:65215167-65215186 | None:intergenic | 35.0% |
| AGGGATAAACGAAGTTTCTT+TGG | + | chr7_1:65215186-65215205 | None:intergenic | 35.0% | |
| ! | TTGTTACTTACAGAGACTAC+TGG | - | chr7_1:65215267-65215286 | Msa1030950:three_prime_UTR | 35.0% |
| !! | CTTTTTGTTATCTCTGTTCC+TGG | - | chr7_1:65215324-65215343 | Msa1030950:three_prime_UTR | 35.0% |
| TACTCGTAATAACTTTGCAG+TGG | - | chr7_1:65215543-65215562 | Msa1030950:three_prime_UTR | 35.0% | |
| TGTAATGGTTACTTACGTGA+TGG | + | chr7_1:65215584-65215603 | None:intergenic | 35.0% | |
| ! | GTGATCACAGTTTAAAACCA+TGG | + | chr7_1:65215771-65215790 | None:intergenic | 35.0% |
| CTTAATTGGTCATAGCAAAC+TGG | + | chr7_1:65215977-65215996 | None:intergenic | 35.0% | |
| CTCTATGTCTACCCATTATT+TGG | - | chr7_1:65216036-65216055 | Msa1030950:three_prime_UTR | 35.0% | |
| ! | TGGTGTTAACATATCGAGTT+AGG | - | chr7_1:65216056-65216075 | Msa1030950:three_prime_UTR | 35.0% |
| TAAGAGGCAAAAATAGGAGA+GGG | + | chr7_1:65216142-65216161 | None:intergenic | 35.0% | |
| TTAAGAGGCAAAAATAGGAG+AGG | + | chr7_1:65216143-65216162 | None:intergenic | 35.0% | |
| AACCAATTATTGCCAACATC+CGG | + | chr7_1:65216330-65216349 | None:intergenic | 35.0% | |
| GTTAACCATCTTAAGTCCAT+TGG | - | chr7_1:65216353-65216372 | Msa1030950:CDS | 35.0% | |
| TGCCATGAATATTTATGCAG+AGG | - | chr7_1:65216463-65216482 | Msa1030950:intron | 35.0% | |
| CTCCTCTGCATAAATATTCA+TGG | + | chr7_1:65216468-65216487 | None:intergenic | 35.0% | |
| TTGAACAACGATTTCTGACA+AGG | + | chr7_1:65216560-65216579 | None:intergenic | 35.0% | |
| TTGTCAGAAATCGTTGTTCA+AGG | - | chr7_1:65216559-65216578 | Msa1030950:CDS | 35.0% | |
| GGAACTCAAGTTTAGTGAAA+AGG | - | chr7_1:65216612-65216631 | Msa1030950:CDS | 35.0% | |
| ! | AAGGGCATGGTTTATGTTAA+AGG | - | chr7_1:65216631-65216650 | Msa1030950:CDS | 35.0% |
| GGATGTACTACAAGAATGAA+TGG | - | chr7_1:65216687-65216706 | Msa1030950:intron | 35.0% | |
| TGTACTACAAGAATGAATGG+AGG | - | chr7_1:65216690-65216709 | Msa1030950:intron | 35.0% | |
| CGAATATCAAAACTTTCAGC+AGG | + | chr7_1:65216782-65216801 | None:intergenic | 35.0% | |
| !! | AAAGTTTTGATATTCGCCTC+AGG | - | chr7_1:65216786-65216805 | Msa1030950:intron | 35.0% |
| TGGAAATCTGCTTAGCAAAT+AGG | + | chr7_1:65216967-65216986 | None:intergenic | 35.0% | |
| ! | TAAAAGCTGATGATGACTTC+AGG | + | chr7_1:65217033-65217052 | None:intergenic | 35.0% |
| CGCCAAACATACTTGAAATT+CGG | - | chr7_1:65217109-65217128 | Msa1030950:intron | 35.0% | |
| ! | CTCCGAATTTCAAGTATGTT+TGG | + | chr7_1:65217114-65217133 | None:intergenic | 35.0% |
| GAGGAAAACAAGTTGTTGAT+CGG | + | chr7_1:65217274-65217293 | None:intergenic | 35.0% | |
| TCCTCCAAGAATGAATAAGT+TGG | - | chr7_1:65217289-65217308 | Msa1030950:intron | 35.0% | |
| ACCAACTTATTCATTCTTGG+AGG | + | chr7_1:65217293-65217312 | None:intergenic | 35.0% | |
| GGTACCAACTTATTCATTCT+TGG | + | chr7_1:65217296-65217315 | None:intergenic | 35.0% | |
| !! | ATTTCTGGCAGAATTAGGAA+GGG | + | chr7_1:65217340-65217359 | None:intergenic | 35.0% |
| !! | TATTTCTGGCAGAATTAGGA+AGG | + | chr7_1:65217341-65217360 | None:intergenic | 35.0% |
| TCATAATGAGATCCATGACA+TGG | - | chr7_1:65217361-65217380 | Msa1030950:CDS | 35.0% | |
| CATAATGAGATCCATGACAT+GGG | - | chr7_1:65217362-65217381 | Msa1030950:CDS | 35.0% | |
| AACAGATGACGATGTGAAAT+TGG | + | chr7_1:65217536-65217555 | None:intergenic | 35.0% | |
| AAGTAAGGATGTTCTTGCTA+TGG | + | chr7_1:65217647-65217666 | None:intergenic | 35.0% | |
| CAAACTTGAGGACAAGTAAA+CGG | - | chr7_1:65217683-65217702 | Msa1030950:CDS | 35.0% | |
| ATGATGAACACAACCATGAA+CGG | + | chr7_1:65217789-65217808 | None:intergenic | 35.0% | |
| TCTAGACCGTTAAATCCAAC+TGG | - | chr7_1:65215002-65215021 | Msa1030950:three_prime_UTR | 40.0% | |
| !! | AAGATGATGGGTTTACCAGT+TGG | + | chr7_1:65215020-65215039 | None:intergenic | 40.0% |
| ! | GGTTTTGCAGAGAATGGATA+TGG | + | chr7_1:65215045-65215064 | None:intergenic | 40.0% |
| TCCATTCTCTGCAAAACCAA+TGG | - | chr7_1:65215047-65215066 | Msa1030950:three_prime_UTR | 40.0% | |
| !! | TGTAGTTTGTTGGAGTGAAG+TGG | + | chr7_1:65215129-65215148 | None:intergenic | 40.0% |
| ACTCCAACAAACTACACTCA+TGG | - | chr7_1:65215133-65215152 | Msa1030950:three_prime_UTR | 40.0% | |
| !! | GTTTTGGATTTTGAAGGTGG+TGG | + | chr7_1:65215164-65215183 | None:intergenic | 40.0% |
| ! | AGAGACTACTGGTTACTCTT+TGG | - | chr7_1:65215278-65215297 | Msa1030950:three_prime_UTR | 40.0% |
| ! | TTATCTCTGTTCCTGGTCTT+TGG | - | chr7_1:65215331-65215350 | Msa1030950:three_prime_UTR | 40.0% |
| CAAACGTTCTGTCAAATCCA+AGG | - | chr7_1:65215362-65215381 | Msa1030950:three_prime_UTR | 40.0% | |
| !! | AACTTTGCAGTGGTTGATAG+AGG | - | chr7_1:65215553-65215572 | Msa1030950:three_prime_UTR | 40.0% |
| !!! | GGGAGTACCATTTTAAGCAT+TGG | - | chr7_1:65215718-65215737 | Msa1030950:three_prime_UTR | 40.0% |
| TGTTGCAATTGTTGATACCG+TGG | - | chr7_1:65215796-65215815 | Msa1030950:three_prime_UTR | 40.0% | |
| GCAAAAATAGGAGAGGGATA+AGG | + | chr7_1:65216136-65216155 | None:intergenic | 40.0% | |
| ATGAAGGTTTGAAGGAGTGA+TGG | - | chr7_1:65216218-65216237 | Msa1030950:exon | 40.0% | |
| ! | TTACGCCAATGGACTTAAGA+TGG | + | chr7_1:65216361-65216380 | None:intergenic | 40.0% |
| TATGCAGAGGAGCTTATTAC+TGG | - | chr7_1:65216476-65216495 | Msa1030950:intron | 40.0% | |
| !! | CACTTTAACTTGCTCCTTTC+TGG | + | chr7_1:65216512-65216531 | None:intergenic | 40.0% |
| ! | TTCTCATTTGCTCGACTTGT+TGG | + | chr7_1:65216591-65216610 | None:intergenic | 40.0% |
| ACAAGTCGAGCAAATGAGAA+AGG | - | chr7_1:65216591-65216610 | Msa1030950:CDS | 40.0% | |
| CAAGTTTAGTGAAAAGGGCA+TGG | - | chr7_1:65216618-65216637 | Msa1030950:CDS | 40.0% | |
| TCTTGTAGTACATCCTGTTC+TGG | + | chr7_1:65216682-65216701 | None:intergenic | 40.0% | |
| ACATACACAAAAAGCAGCCA+CGG | - | chr7_1:65216713-65216732 | Msa1030950:intron | 40.0% | |
| CAACATGTTCAATGGCTACT+TGG | - | chr7_1:65216879-65216898 | Msa1030950:intron | 40.0% | |
| TTAGCAAATAGGCGTGCTAT+TGG | + | chr7_1:65216956-65216975 | None:intergenic | 40.0% | |
| GTTGATCGGTTAAAGACCTT+GGG | + | chr7_1:65217260-65217279 | None:intergenic | 40.0% | |
| TGTTGATCGGTTAAAGACCT+TGG | + | chr7_1:65217261-65217280 | None:intergenic | 40.0% | |
| GTTGGTACCTCCAAATTGTA+TGG | - | chr7_1:65217307-65217326 | Msa1030950:intron | 40.0% | |
| !! | TTGGCAAACAGTGTTGATGT+TGG | + | chr7_1:65217517-65217536 | None:intergenic | 40.0% |
| AGCAAGAACATCCTTACTTG+CGG | - | chr7_1:65217648-65217667 | Msa1030950:CDS | 40.0% | |
| GACAAGTAAACGGATCAAAG+AGG | - | chr7_1:65217693-65217712 | Msa1030950:CDS | 40.0% | |
| AAACAAACCTTCCACCTGTT+AGG | - | chr7_1:65217719-65217738 | Msa1030950:CDS | 40.0% | |
| TTCGCATACTTTGTCCTAAC+AGG | + | chr7_1:65217736-65217755 | None:intergenic | 40.0% | |
| TTAACAGCAGAAACAGTTGC+AGG | - | chr7_1:65217832-65217851 | Msa1030950:exon | 40.0% | |
| GAAACAGTTGCAGGAATTTC+AGG | - | chr7_1:65217841-65217860 | Msa1030950:five_prime_UTR | 40.0% | |
| !!! | GCCATTGGTTTTGCAGAGAA+TGG | + | chr7_1:65215051-65215070 | None:intergenic | 45.0% |
| TGGAGTGAAGTGGAAGAGAA+CGG | + | chr7_1:65215119-65215138 | None:intergenic | 45.0% | |
| ! | CTGCCATGAGTGTAGTTTGT+TGG | + | chr7_1:65215139-65215158 | None:intergenic | 45.0% |
| GAATTCAGCACTCTCGTGAA+GGG | + | chr7_1:65215205-65215224 | None:intergenic | 45.0% | |
| TGAATTCAGCACTCTCGTGA+AGG | + | chr7_1:65215206-65215225 | None:intergenic | 45.0% | |
| TTGATGAGAGACCAAAGACC+AGG | + | chr7_1:65215345-65215364 | None:intergenic | 45.0% | |
| ACCGTGGACATAAGCATTTG+TGG | - | chr7_1:65215812-65215831 | Msa1030950:three_prime_UTR | 45.0% | |
| GCCACAAATGCTTATGTCCA+CGG | + | chr7_1:65215816-65215835 | None:intergenic | 45.0% | |
| GGAGCTCCTATGCAAAGATT+TGG | + | chr7_1:65215956-65215975 | None:intergenic | 45.0% | |
| ATTATTGCCAACATCCGGCA+CGG | + | chr7_1:65216325-65216344 | None:intergenic | 45.0% | |
| TGCCGGATGTTGGCAATAAT+TGG | - | chr7_1:65216325-65216344 | Msa1030950:CDS | 45.0% | |
| AAGTCCATTGGCGTAAGTGA+AGG | - | chr7_1:65216365-65216384 | Msa1030950:CDS | 45.0% | |
| AATGCCTTCACTTACGCCAA+TGG | + | chr7_1:65216372-65216391 | None:intergenic | 45.0% | |
| TAAAGTGAACTAGGTGCCTG+AGG | + | chr7_1:65216805-65216824 | None:intergenic | 45.0% | |
| AAATGCGCCATGGACATACT+TGG | + | chr7_1:65217184-65217203 | None:intergenic | 45.0% | |
| GATAATGTCGAAATGCGCCA+TGG | + | chr7_1:65217194-65217213 | None:intergenic | 45.0% | |
| ACCTCCAAATTGTATGGTGC+AGG | - | chr7_1:65217313-65217332 | Msa1030950:CDS | 45.0% | |
| ACCTGCACCATACAATTTGG+AGG | + | chr7_1:65217317-65217336 | None:intergenic | 45.0% | |
| TTGCCAAATGCTGGAGACTT+TGG | + | chr7_1:65217400-65217419 | None:intergenic | 45.0% | |
| AAAGTCTCCAGCATTTGGCA+AGG | - | chr7_1:65217399-65217418 | Msa1030950:CDS | 45.0% | |
| AAGTCTCCAGCATTTGGCAA+GGG | - | chr7_1:65217400-65217419 | Msa1030950:CDS | 45.0% | |
| ! | ATCGGTGTTTGCACACATCT+GGG | + | chr7_1:65217433-65217452 | None:intergenic | 45.0% |
| AGAGAGTCAAGAACCCAGAA+TGG | + | chr7_1:65217465-65217484 | None:intergenic | 45.0% | |
| ACTCTCTCAGAATCTTGCTG+AGG | - | chr7_1:65217478-65217497 | Msa1030950:intron | 45.0% | |
| CTCTCTCAGAATCTTGCTGA+GGG | - | chr7_1:65217479-65217498 | Msa1030950:intron | 45.0% | |
| GTGGAAAGCCAGTATTCATC+AGG | + | chr7_1:65217564-65217583 | None:intergenic | 45.0% | |
| GCACTACTGTCACTGTTAAG+TGG | + | chr7_1:65217588-65217607 | None:intergenic | 45.0% | |
| TTAACAGTGACAGTAGTGCC+TGG | - | chr7_1:65217589-65217608 | Msa1030950:CDS | 45.0% | |
| ACATGCTGAGCACAAACTTG+AGG | - | chr7_1:65217671-65217690 | Msa1030950:CDS | 45.0% | |
| ACTTTGTCCTAACAGGTGGA+AGG | + | chr7_1:65217729-65217748 | None:intergenic | 45.0% | |
| GCATACTTTGTCCTAACAGG+TGG | + | chr7_1:65217733-65217752 | None:intergenic | 45.0% | |
| AGCATCATCTTGGCAGCCAT+TGG | + | chr7_1:65215066-65215085 | None:intergenic | 50.0% | |
| TGGGGACAACAGCATCATCT+TGG | + | chr7_1:65215076-65215095 | None:intergenic | 50.0% | |
| GAAGTGGAAGAGAACGGAGA+GGG | + | chr7_1:65215113-65215132 | None:intergenic | 50.0% | |
| TGAAGTGGAAGAGAACGGAG+AGG | + | chr7_1:65215114-65215133 | None:intergenic | 50.0% | |
| ! | AAGGCACCAAGTCAAGTTGC+AGG | - | chr7_1:65215502-65215521 | Msa1030950:three_prime_UTR | 50.0% |
| ! | AGGCACCAAGTCAAGTTGCA+GGG | - | chr7_1:65215503-65215522 | Msa1030950:three_prime_UTR | 50.0% |
| TTTCTGCACTTGCATCAGCC+TGG | - | chr7_1:65216272-65216291 | Msa1030950:CDS | 50.0% | |
| CACGGTTATGGTGAGCACAA+GGG | + | chr7_1:65216307-65216326 | None:intergenic | 50.0% | |
| CATATGCCTGTGTTTAGCCG+TGG | + | chr7_1:65216733-65216752 | None:intergenic | 50.0% | |
| TCTCAGGCCAAGTATGTCCA+TGG | - | chr7_1:65217174-65217193 | Msa1030950:intron | 50.0% | |
| GGGACCTGCACCATACAATT+TGG | + | chr7_1:65217320-65217339 | None:intergenic | 50.0% | |
| !! | GGATGGTTTTGCCCATGTCA+TGG | + | chr7_1:65217376-65217395 | None:intergenic | 50.0% |
| CCAAATGCTGGAGACTTTGG+CGG | + | chr7_1:65217397-65217416 | None:intergenic | 50.0% | |
| TGCATTCCCTTGCCAAATGC+TGG | + | chr7_1:65217409-65217428 | None:intergenic | 50.0% | |
| ! | GATCGGTGTTTGCACACATC+TGG | + | chr7_1:65217434-65217453 | None:intergenic | 50.0% |
| CCAGAATGGCTCGTTGTGAT+CGG | + | chr7_1:65217451-65217470 | None:intergenic | 50.0% | |
| CGATCACAACGAGCCATTCT+GGG | - | chr7_1:65217449-65217468 | Msa1030950:intron | 50.0% | |
| GTTCTGCGCCTGATGAATAC+TGG | - | chr7_1:65217553-65217572 | Msa1030950:CDS | 50.0% | |
| ACTGTCACTGTTAAGTGGCG+TGG | + | chr7_1:65217583-65217602 | None:intergenic | 50.0% | |
| TATGCGAATGCCCTCTTGCT+TGG | - | chr7_1:65217748-65217767 | Msa1030950:CDS | 50.0% | |
| TCCTGGTGATCCAAGCAAGA+GGG | + | chr7_1:65217761-65217780 | None:intergenic | 50.0% | |
| AACCATGAACGGTTTCCTCC+TGG | + | chr7_1:65217778-65217797 | None:intergenic | 50.0% | |
| AGGGAGATGGTGTGGATGTG+GGG | + | chr7_1:65215094-65215113 | None:intergenic | 55.0% | |
| GAGGGAGATGGTGTGGATGT+GGG | + | chr7_1:65215095-65215114 | None:intergenic | 55.0% | |
| AGAGGGAGATGGTGTGGATG+TGG | + | chr7_1:65215096-65215115 | None:intergenic | 55.0% | |
| GAAGAGAACGGAGAGGGAGA+TGG | + | chr7_1:65215107-65215126 | None:intergenic | 55.0% | |
| ! | GGCACCAAGTCAAGTTGCAG+GGG | - | chr7_1:65215504-65215523 | Msa1030950:three_prime_UTR | 55.0% |
| ! | ACCAAGTCAAGTTGCAGGGG+AGG | - | chr7_1:65215507-65215526 | Msa1030950:three_prime_UTR | 55.0% |
| ACCTCCCCTGCAACTTGACT+TGG | + | chr7_1:65215511-65215530 | None:intergenic | 55.0% | |
| AAGGAGTGATGGTTCCCAGC+AGG | - | chr7_1:65216229-65216248 | Msa1030950:exon | 55.0% | |
| AGGAGTGATGGTTCCCAGCA+GGG | - | chr7_1:65216230-65216249 | Msa1030950:CDS | 55.0% | |
| GCACAAGGGAAACACTTGCC+AGG | + | chr7_1:65216293-65216312 | None:intergenic | 55.0% | |
| GCACGGTTATGGTGAGCACA+AGG | + | chr7_1:65216308-65216327 | None:intergenic | 55.0% | |
| TGTGCTCACCATAACCGTGC+CGG | - | chr7_1:65216308-65216327 | Msa1030950:CDS | 55.0% | |
| ACCATAACCGTGCCGGATGT+TGG | - | chr7_1:65216315-65216334 | Msa1030950:CDS | 55.0% | |
| CTGGACTCGAGCATCCAGAA+AGG | - | chr7_1:65216495-65216514 | Msa1030950:intron | 55.0% | |
| AAGCAGCCACGGCTAAACAC+AGG | - | chr7_1:65216724-65216743 | Msa1030950:intron | 55.0% | |
| TTCCACTAGTGAGCAGCCCA+AGG | - | chr7_1:65217241-65217260 | Msa1030950:intron | 55.0% | |
| ATGCTGGAGACTTTGGCGGA+TGG | + | chr7_1:65217393-65217412 | None:intergenic | 55.0% | |
| CCGCCAAAGTCTCCAGCATT+TGG | - | chr7_1:65217394-65217413 | Msa1030950:CDS | 55.0% | |
| CCGATCACAACGAGCCATTC+TGG | - | chr7_1:65217448-65217467 | Msa1030950:intron | 55.0% | |
| AGTAGTGCCTGGCTCAATGC+TGG | - | chr7_1:65217600-65217619 | Msa1030950:CDS | 55.0% | |
| ! | GATCTGTCCAGCATTGAGCC+AGG | + | chr7_1:65217610-65217629 | None:intergenic | 55.0% |
| GCTCAGCATGTCCGCAAGTA+AGG | + | chr7_1:65217662-65217681 | None:intergenic | 55.0% | |
| CTCCTGGTGATCCAAGCAAG+AGG | + | chr7_1:65217762-65217781 | None:intergenic | 55.0% | |
| CTCTTGCTTGGATCACCAGG+AGG | - | chr7_1:65217760-65217779 | Msa1030950:CDS | 55.0% | |
| CACCAGGAGGAAACCGTTCA+TGG | - | chr7_1:65217773-65217792 | Msa1030950:CDS | 55.0% | |
| GAACGGAGAGGGAGATGGTG+TGG | + | chr7_1:65215102-65215121 | None:intergenic | 60.0% | |
| GGAGTGATGGTTCCCAGCAG+GGG | - | chr7_1:65216231-65216250 | Msa1030950:CDS | 60.0% | |
| GAGTGATGGTTCCCAGCAGG+GGG | - | chr7_1:65216232-65216251 | Msa1030950:CDS | 60.0% | |
| GCCAACATCCGGCACGGTTA+TGG | + | chr7_1:65216319-65216338 | None:intergenic | 60.0% | |
| GACCTTGGGCTGCTCACTAG+TGG | + | chr7_1:65217246-65217265 | None:intergenic | 60.0% | |
| GCCCTCTTGCTTGGATCACC+AGG | - | chr7_1:65217757-65217776 | Msa1030950:CDS | 60.0% | |
| !! | AGTGCTGCTTGCCCCCTGCT+GGG | + | chr7_1:65216246-65216265 | None:intergenic | 65.0% |
| !! | CAGTGCTGCTTGCCCCCTGC+TGG | + | chr7_1:65216247-65216266 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 65214987 | 65217912 | 65214987 | ID=Msa1030950;Name=Msa1030950 |
| chr7_1 | mRNA | 65214987 | 65217912 | 65214987 | ID=Msa1030950-mRNA-1;Parent=Msa1030950;Name=Msa1030950-mRNA-1;_AED=0.04;_eAED=0.04;_QI=79|1|1|1|1|1|4|1243|259 |
| chr7_1 | exon | 65214987 | 65216416 | 65214987 | ID=Msa1030950-mRNA-1:exon:14501;Parent=Msa1030950-mRNA-1 |
| chr7_1 | exon | 65216523 | 65216675 | 65216523 | ID=Msa1030950-mRNA-1:exon:14500;Parent=Msa1030950-mRNA-1 |
| chr7_1 | exon | 65217312 | 65217433 | 65217312 | ID=Msa1030950-mRNA-1:exon:14499;Parent=Msa1030950-mRNA-1 |
| chr7_1 | exon | 65217516 | 65217912 | 65217516 | ID=Msa1030950-mRNA-1:exon:14498;Parent=Msa1030950-mRNA-1 |
| chr7_1 | five_prime_UTR | 65217834 | 65217912 | 65217834 | ID=Msa1030950-mRNA-1:five_prime_utr;Parent=Msa1030950-mRNA-1 |
| chr7_1 | CDS | 65217516 | 65217833 | 65217516 | ID=Msa1030950-mRNA-1:cds;Parent=Msa1030950-mRNA-1 |
| chr7_1 | CDS | 65217312 | 65217433 | 65217312 | ID=Msa1030950-mRNA-1:cds;Parent=Msa1030950-mRNA-1 |
| chr7_1 | CDS | 65216523 | 65216675 | 65216523 | ID=Msa1030950-mRNA-1:cds;Parent=Msa1030950-mRNA-1 |
| chr7_1 | CDS | 65216230 | 65216416 | 65216230 | ID=Msa1030950-mRNA-1:cds;Parent=Msa1030950-mRNA-1 |
| chr7_1 | three_prime_UTR | 65214987 | 65216229 | 65214987 | ID=Msa1030950-mRNA-1:three_prime_utr;Parent=Msa1030950-mRNA-1 |
| Gene Sequence |
| Protein sequence |
