AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0374400

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0374400 MtrunA17_Chr3g0124821 94.430 395 13 2 1 394 1 387 0.0 719
Msa0374400 MtrunA17_Chr4g0037131 47.619 273 102 8 99 368 14 248 8.76e-73 230
Msa0374400 MtrunA17_Chr5g0405731 47.037 270 108 7 99 368 13 247 9.38e-72 228
Msa0374400 MtrunA17_Chr4g0030171 45.455 264 110 8 100 362 16 246 2.18e-64 207
Msa0374400 MtrunA17_Chr3g0137751 31.847 314 156 13 55 365 59 317 2.53e-30 119
Msa0374400 MtrunA17_Chr2g0292151 25.830 271 155 7 120 363 63 314 4.24e-15 76.3
Msa0374400 MtrunA17_Chr3g0124831 100.000 44 0 0 400 443 1 44 2.67e-14 67.0
Msa0374400 MtrunA17_Chr4g0013171 28.253 269 140 12 120 361 61 303 2.42e-12 67.8
Msa0374400 MtrunA17_Chr2g0320031 24.567 289 168 9 105 370 45 306 2.91e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0374400 AT1G77490.1 69.087 427 117 5 19 442 2 416 0.0 582
Msa0374400 AT1G77490.2 69.087 427 117 5 19 442 2 416 0.0 582
Msa0374400 AT4G08390.2 81.338 284 45 1 90 373 97 372 8.67e-176 496
Msa0374400 AT4G08390.5 81.338 284 45 1 90 373 97 372 8.67e-176 496
Msa0374400 AT4G08390.1 81.338 284 45 1 90 373 97 372 8.67e-176 496
Msa0374400 AT4G08390.3 81.338 284 45 1 90 373 96 371 9.13e-176 496
Msa0374400 AT4G08390.4 74.648 284 38 1 90 373 97 346 1.21e-157 449
Msa0374400 AT4G35000.1 49.259 270 100 8 99 367 13 246 1.47e-73 233
Msa0374400 AT1G07890.2 46.591 264 107 7 100 362 16 246 5.59e-66 212
Msa0374400 AT1G07890.8 46.591 264 107 7 100 362 16 246 5.59e-66 212
Msa0374400 AT1G07890.4 46.591 264 107 7 100 362 16 246 5.59e-66 212
Msa0374400 AT1G07890.7 46.591 264 107 7 100 362 16 246 5.59e-66 212
Msa0374400 AT1G07890.1 46.591 264 107 7 100 362 16 246 5.59e-66 212
Msa0374400 AT1G07890.3 46.591 264 107 7 100 362 16 246 5.59e-66 212
Msa0374400 AT1G07890.5 46.591 264 107 7 100 362 16 246 5.59e-66 212
Msa0374400 AT1G07890.6 45.833 264 109 6 100 362 16 246 5.60e-66 212
Msa0374400 AT3G09640.2 46.388 263 108 6 100 362 17 246 1.29e-65 211
Msa0374400 AT3G09640.1 46.388 263 108 6 100 362 17 246 1.29e-65 211
Msa0374400 AT4G35970.1 43.066 274 118 8 99 371 12 248 1.54e-59 196
Msa0374400 AT4G35970.2 42.213 244 105 7 99 341 12 220 8.25e-51 171
Msa0374400 AT4G32320.1 32.407 324 162 13 54 365 48 326 7.08e-33 127
Msa0374400 AT4G33420.1 31.925 213 108 8 170 365 119 311 6.53e-15 75.9
Msa0374400 AT4G33420.2 31.925 213 108 8 170 365 166 358 7.30e-15 76.3
Msa0374400 AT2G22420.1 27.178 287 156 10 104 361 41 303 9.12e-15 75.5
Msa0374400 AT5G66390.1 28.435 313 142 14 103 366 45 324 9.40e-14 72.4
Msa0374400 AT2G18150.1 27.007 274 143 11 120 361 70 318 1.12e-13 72.4
Msa0374400 AT3G28200.1 29.358 218 114 7 165 364 106 301 2.96e-13 70.9
Msa0374400 AT1G24110.1 28.708 209 109 6 179 364 116 307 5.23e-13 70.1
Msa0374400 AT1G49570.1 24.742 291 151 11 120 372 82 342 6.09e-12 67.0

Find 165 sgRNAs with CRISPR-Local

Find 421 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCATAGATCAATTTCATTT+TGG 0.115182 3_1:+73847795 None:intergenic
ATATCTGTTTGGAAACTAAT+TGG 0.210656 3_1:-73848350 Msa0374400:exon
AACCTTTCCAGAGGAGTAAT+TGG 0.234989 3_1:+73848808 None:intergenic
CCAGGAAGTCTCCCTTCTTC+AGG 0.253068 3_1:+73851538 None:intergenic
TGCTCCAAGGTTGCTGAGTT+TGG 0.256056 3_1:+73849108 None:intergenic
CTCCTCAATATTCTTATTAT+AGG 0.258901 3_1:+73851959 None:intergenic
GTCAACTATATCTGCAAATT+AGG 0.266142 3_1:+73854301 None:intergenic
CCTTCTTCAGGGCATTGTTC+AGG 0.268066 3_1:+73851550 None:intergenic
CATAATTGTTATTGCTGCTT+TGG 0.283340 3_1:-73848383 Msa0374400:CDS
TTTGACTTTAGAGCCTTATC+TGG 0.287367 3_1:+73848421 None:intergenic
CAGGAAATTGTTGCATTATC+TGG 0.291185 3_1:-73850945 Msa0374400:CDS
CAATAACAATTATGATGTTT+AGG 0.296597 3_1:+73848392 None:intergenic
CCTGAAGAAGGGAGACTTCC+TGG 0.303606 3_1:-73851538 Msa0374400:intron
CATGCGTGCGGCGGCGGCGC+CGG 0.306467 3_1:+73853877 None:intergenic
TTCTCACATCTTTCTCAATC+AGG 0.306856 3_1:-73853732 Msa0374400:intron
AGTATAAATGTAGGGGTATA+TGG 0.307712 3_1:+73848071 None:intergenic
TTTCAGGGCATTGTGGTAGA+TGG 0.326025 3_1:-73848866 Msa0374400:intron
AACTTCTCTCCCACTACATT+TGG 0.336185 3_1:+73848839 None:intergenic
GCTGAAATCCAATGATATAA+AGG 0.340292 3_1:+73848011 None:intergenic
AATAAGATGGGTCAAGTATA+AGG 0.349609 3_1:-73854140 Msa0374400:five_prime_UTR
TAAAACTCAACGAAACAAAA+TGG 0.353130 3_1:-73853957 Msa0374400:exon
TACAACACGGAAAAGAATAA+TGG 0.354199 3_1:-73847836 Msa0374400:three_prime_UTR
AAAGATGGGCCAGGAGCACC+TGG 0.354863 3_1:-73849552 Msa0374400:CDS
AATATTTGTCTTTGATTGGC+TGG 0.361482 3_1:+73851768 None:intergenic
TAAGTTCTGTCATCCTCTTT+TGG 0.362946 3_1:-73853502 Msa0374400:intron
CTGGAGAGTTGGAACAATTA+CGG 0.365633 3_1:-73848143 Msa0374400:three_prime_UTR
CCTGAATATTTGTCTTTGAT+TGG 0.366131 3_1:+73851764 None:intergenic
GTCTACTCTTCCATATTTCA+TGG 0.367084 3_1:+73851582 None:intergenic
TGGAGAGTTGGAACAATTAC+GGG 0.367409 3_1:-73848142 Msa0374400:three_prime_UTR
CCAATCAAAGACAAATATTC+AGG 0.367571 3_1:-73851764 Msa0374400:CDS
CTAGACCAGACCGCAGTGGC+TGG 0.369322 3_1:-73850902 Msa0374400:CDS
ATTATCTGGTGCGCACACAC+TGG 0.384414 3_1:-73850931 Msa0374400:CDS
TTCTATGTGACAGATTCGTT+TGG 0.387767 3_1:-73852000 Msa0374400:intron
TTATCTGGTGCGCACACACT+GGG 0.393437 3_1:-73850930 Msa0374400:CDS
ATTTCAATAAAATTTGTGTT+TGG 0.396018 3_1:-73847737 Msa0374400:three_prime_UTR
GTTTGACAACTCTTACTTCA+AGG 0.396786 3_1:-73849499 Msa0374400:intron
GACGGTGGCTCTGGTGGCGG+AGG 0.401403 3_1:+73853850 None:intergenic
GTATAATTTCCTTAGTCCTC+TGG 0.405390 3_1:+73848093 None:intergenic
TCTATGTGACAGATTCGTTT+GGG 0.406923 3_1:-73851999 Msa0374400:intron
GGATTAATAAGAAAACTAAA+AGG 0.408999 3_1:+73847894 None:intergenic
TTGCCCCAGCCACTGCGGTC+TGG 0.411028 3_1:+73850897 None:intergenic
AGAGATGGAATCAGCTTTGT+GGG 0.424573 3_1:+73847988 None:intergenic
GTACTTGGGATTCAAGTGTT+TGG 0.431119 3_1:+73854181 None:intergenic
GGGAATCATGCGTGCGGCGG+CGG 0.431703 3_1:+73853871 None:intergenic
TTTCTCATTCTACAGAAAGA+TGG 0.432931 3_1:-73849567 Msa0374400:intron
CTTTAACCATTGTGCAGTCC+AGG 0.440549 3_1:+73849521 None:intergenic
TCTTTGAATCTTCAGGAAGC+TGG 0.446122 3_1:-73851619 Msa0374400:intron
CAGGAAGTCTCCCTTCTTCA+GGG 0.452380 3_1:+73851539 None:intergenic
GGGGTGAAAGTATAAATGTA+GGG 0.452749 3_1:+73848063 None:intergenic
CAAGCAATTGAGCGAGGAAA+CGG 0.455809 3_1:+73853772 None:intergenic
ACCACAATGGCTACAATCAC+CGG 0.459447 3_1:-73853896 Msa0374400:CDS
GTAGCAGCCAATTACTCCTC+TGG 0.460289 3_1:-73848815 Msa0374400:CDS
TAGACCAGACCGCAGTGGCT+GGG 0.460927 3_1:-73850901 Msa0374400:CDS
TATACCGTGTATTTAGTCTC+AGG 0.464888 3_1:+73850873 None:intergenic
ATTCGTAGATGCAAAATTGA+AGG 0.465625 3_1:+73847869 None:intergenic
CTGAAATCCAATGATATAAA+GGG 0.466579 3_1:+73848012 None:intergenic
ATTGAGCGAGGAAACGGAAC+TGG 0.467178 3_1:+73853778 None:intergenic
CAGGTTCAAACTTTGCTCCA+AGG 0.468266 3_1:+73849095 None:intergenic
CGCAAATGATCCGCAGGTGA+AGG 0.470664 3_1:+73851091 None:intergenic
AGTACATGAAAATGACTCTT+GGG 0.471543 3_1:-73854163 Msa0374400:five_prime_UTR
CATGCCAAACTCAGCAACCT+TGG 0.474570 3_1:-73849112 Msa0374400:CDS
GCACTGAAAATTACCAAAAG+AGG 0.475415 3_1:+73853489 None:intergenic
ATGCTATGAGGAAGAAGATA+CGG 0.479276 3_1:-73848471 Msa0374400:CDS
CAACGTGAACAGACCTCTGC+AGG 0.481098 3_1:+73849076 None:intergenic
AATGACTCTTGGGAATAAGA+TGG 0.484015 3_1:-73854153 Msa0374400:five_prime_UTR
GAAATTCACTACAAGTGAAT+CGG 0.484500 3_1:-73848314 Msa0374400:three_prime_UTR
TTGACTTTAGAGCCTTATCT+GGG 0.486207 3_1:+73848422 None:intergenic
GAGGAGAAGTTCGTGCTTCG+AGG 0.488828 3_1:-73853608 Msa0374400:CDS
AAGTACATGAAAATGACTCT+TGG 0.489140 3_1:-73854164 Msa0374400:five_prime_UTR
GAGAGATGGAATCAGCTTTG+TGG 0.491842 3_1:+73847987 None:intergenic
CCTTGTCATTCAACCCCATT+CGG 0.491886 3_1:+73851056 None:intergenic
TTCTCATTCTACAGAAAGAT+GGG 0.496196 3_1:-73849566 Msa0374400:intron
AGACCAGACCGCAGTGGCTG+GGG 0.496549 3_1:-73850900 Msa0374400:CDS
TTCAAATCTTAAGCTACCAT+TGG 0.498143 3_1:+73851917 None:intergenic
CGTGCTTCGAGGGGACGATT+CGG 0.498992 3_1:-73853597 Msa0374400:CDS
TGAGAAATATGCTGTAGATC+AGG 0.501966 3_1:-73849164 Msa0374400:CDS
GAAGATACGGGCTGAATATG+AGG 0.502305 3_1:-73848458 Msa0374400:CDS
CCTGAACAATGCCCTGAAGA+AGG 0.503982 3_1:-73851550 Msa0374400:CDS
AGGGGTGAAAGTATAAATGT+AGG 0.504623 3_1:+73848062 None:intergenic
GTGATAGAGCCAGAGGACTA+AGG 0.505410 3_1:-73848102 Msa0374400:three_prime_UTR
GCAAATGATCCGCAGGTGAA+GGG 0.506978 3_1:+73851092 None:intergenic
TAACAGTATAGGAAGGGAAG+AGG 0.507579 3_1:-73849418 Msa0374400:intron
TGAGACGGTGGCTCTGGTGG+CGG 0.507725 3_1:+73853847 None:intergenic
GCTGAATATGAGGCGGTTGG+CGG 0.508251 3_1:-73848448 Msa0374400:CDS
ATACTCCACTACTGGAGAGT+TGG 0.509908 3_1:-73848154 Msa0374400:three_prime_UTR
AGGAGAAGTTCGTGCTTCGA+GGG 0.513885 3_1:-73853607 Msa0374400:CDS
AGATGGGCCAGGAGCACCTG+GGG 0.518802 3_1:-73849550 Msa0374400:CDS
AAGGAGAAGGAAGAGAGAGA+TGG 0.521545 3_1:+73847973 None:intergenic
TGAGAGTGAGACGGTGGCTC+TGG 0.525646 3_1:+73853841 None:intergenic
CGTTTGGGATGGCATGATGC+TGG 0.534032 3_1:-73851984 Msa0374400:CDS
AAGCGCTAGAGAAGATATCA+AGG 0.535333 3_1:-73853538 Msa0374400:CDS
GAAGTTTCAATGCATTTACA+AGG 0.538155 3_1:+73851792 None:intergenic
TCTACTCTTCCATATTTCAT+GGG 0.539117 3_1:+73851583 None:intergenic
TAATGAATACATACCAGCAT+TGG 0.539538 3_1:+73851875 None:intergenic
ATGACTCTTGGGAATAAGAT+GGG 0.540196 3_1:-73854152 Msa0374400:five_prime_UTR
ACGGTGGCTCTGGTGGCGGA+GGG 0.544294 3_1:+73853851 None:intergenic
CAAATGATCCGCAGGTGAAG+GGG 0.545564 3_1:+73851093 None:intergenic
GGTTGGCGGAAGCCCAGATA+AGG 0.547496 3_1:-73848434 Msa0374400:CDS
AATTGAAATGGTGAAGGAGA+AGG 0.549067 3_1:+73847960 None:intergenic
CCACAGAGAGGTGGAGCCAA+TGG 0.553837 3_1:-73851933 Msa0374400:CDS
GGAGGGAATCATGCGTGCGG+CGG 0.556091 3_1:+73853868 None:intergenic
TACCTATAATAAGAATATTG+AGG 0.557454 3_1:-73851961 Msa0374400:CDS
AAATGATCCGCAGGTGAAGG+GGG 0.559516 3_1:+73851094 None:intergenic
GTATAGGAAGGGAAGAGGAG+AGG 0.560108 3_1:-73849413 Msa0374400:CDS
CTGAACAATGCCCTGAAGAA+GGG 0.562898 3_1:-73851549 Msa0374400:CDS
TTGAAACATGGAGCCAATGC+TGG 0.568407 3_1:-73851888 Msa0374400:intron
TGCTATGAGGAAGAAGATAC+GGG 0.568469 3_1:-73848470 Msa0374400:CDS
AATCCACGATATGCTTGTGT+AGG 0.569340 3_1:+73854094 None:intergenic
TGTGACAGATTCGTTTGGGA+TGG 0.570034 3_1:-73851995 Msa0374400:intron
TTTGAAGTTGAGTTGAAACA+TGG 0.570207 3_1:-73851900 Msa0374400:CDS
AAGATGGGCCAGGAGCACCT+GGG 0.570888 3_1:-73849551 Msa0374400:CDS
AAGAGCTGTCTGATGCTATG+AGG 0.570930 3_1:-73848483 Msa0374400:CDS
TATGGAAGAGTAGACGTCAC+TGG 0.572351 3_1:-73851574 Msa0374400:CDS
TGAAAATGAGAAGAACGAAC+GGG 0.572470 3_1:+73853814 None:intergenic
TTGAATCTTCAGGAAGCTGG+AGG 0.572995 3_1:-73851616 Msa0374400:intron
GTAGATGCAAAATTGAAGGA+AGG 0.577399 3_1:+73847873 None:intergenic
AGATGGTTCTCCAAATGTAG+TGG 0.579625 3_1:-73848849 Msa0374400:CDS
GTCAAGTATAAGGTAGGACT+AGG 0.580370 3_1:-73854130 Msa0374400:five_prime_UTR
ACTTGACGCAAATGATCCGC+AGG 0.584569 3_1:+73851085 None:intergenic
AGCTAGTGCTACAGCTGTGG+AGG 0.584663 3_1:-73851714 Msa0374400:intron
ATTCTACAGAAAGATGGGCC+AGG 0.587158 3_1:-73849561 Msa0374400:intron
AGATGGGTCAAGTATAAGGT+AGG 0.587771 3_1:-73854136 Msa0374400:five_prime_UTR
TTGTTCCAACTCTCCAGTAG+TGG 0.589391 3_1:+73848149 None:intergenic
GTGATTGTAGCCATTGTGGT+TGG 0.591078 3_1:+73853899 None:intergenic
AAAAGTATTGGGTAGATGAG+TGG 0.592611 3_1:-73854215 Msa0374400:five_prime_UTR
CGGGCTGAATATGAGGCGGT+TGG 0.594896 3_1:-73848451 Msa0374400:CDS
GAGGAGTGGCCACAGAGAGG+TGG 0.596367 3_1:-73851942 Msa0374400:CDS
AGCCAATTACTCCTCTGGAA+AGG 0.597209 3_1:-73848810 Msa0374400:intron
ATGAAAATGAGAAGAACGAA+CGG 0.600197 3_1:+73853813 None:intergenic
ATGCAAGTATGAGTAGAAGA+TGG 0.601180 3_1:+73854279 None:intergenic
GTTAGCTAGTGCTACAGCTG+TGG 0.601973 3_1:-73851717 Msa0374400:CDS
CATTAATACGCAAATGCCAA+AGG 0.602261 3_1:+73848267 None:intergenic
AGCAAAGTTTGAACCTGCAG+AGG 0.602470 3_1:-73849089 Msa0374400:intron
GAGTGAGACGGTGGCTCTGG+TGG 0.602864 3_1:+73853844 None:intergenic
TTCGAGGGGACGATTCGGAA+CGG 0.614911 3_1:-73853592 Msa0374400:CDS
GACAATCCTGGACTGCACAA+TGG 0.620331 3_1:-73849527 Msa0374400:CDS
GATGGTTCTCCAAATGTAGT+GGG 0.623661 3_1:-73848848 Msa0374400:CDS
AGAAAGATGTGAGAAATGCG+AGG 0.626873 3_1:+73853740 None:intergenic
CCGAATGGGGTTGAATGACA+AGG 0.626939 3_1:-73851056 Msa0374400:intron
CCATTGGCTCCACCTCTCTG+TGG 0.637470 3_1:+73851933 None:intergenic
GCCGGTGATTGTAGCCATTG+TGG 0.638714 3_1:+73853895 None:intergenic
GGCGGAGGGAATCATGCGTG+CGG 0.643016 3_1:+73853865 None:intergenic
CTGGTGCGCACACACTGGGG+CGG 0.645690 3_1:-73850926 Msa0374400:CDS
GGGTGAAAGTATAAATGTAG+GGG 0.647476 3_1:+73848064 None:intergenic
TATCTGGTGCGCACACACTG+GGG 0.652499 3_1:-73850929 Msa0374400:CDS
AATGATCCGCAGGTGAAGGG+GGG 0.652617 3_1:+73851095 None:intergenic
ATAATAAGAATATTGAGGAG+TGG 0.654700 3_1:-73851956 Msa0374400:CDS
GGAGAAGTTCGTGCTTCGAG+GGG 0.655631 3_1:-73853606 Msa0374400:CDS
CAAGCTTAAAACCTTTCCAG+AGG 0.659132 3_1:+73848799 None:intergenic
AAACCTACACAAGCATATCG+TGG 0.661632 3_1:-73854097 Msa0374400:five_prime_UTR
GTGGTTGGTGAAGAGAGTGA+AGG 0.663024 3_1:+73853914 None:intergenic
ACTCTCTTCACCAACCACAA+TGG 0.666345 3_1:-73853909 Msa0374400:CDS
AAACAATGTGATAGAGCCAG+AGG 0.667902 3_1:-73848109 Msa0374400:three_prime_UTR
CGGTCTAGACCAGACCGCAG+TGG 0.670072 3_1:-73850906 Msa0374400:CDS
AGAACGCAAGCAATTGAGCG+AGG 0.671598 3_1:+73853766 None:intergenic
CAGGTTTGCCCCAGCCACTG+CGG 0.673272 3_1:+73850892 None:intergenic
GATGGGCCAGGAGCACCTGG+GGG 0.675083 3_1:-73849549 Msa0374400:CDS
CAAACCTGAGACTAAATACA+CGG 0.675596 3_1:-73850877 Msa0374400:intron
GGATTATCATCCAAAACACA+AGG 0.696794 3_1:-73854029 Msa0374400:five_prime_UTR
GAGATGGAATCAGCTTTGTG+GGG 0.697416 3_1:+73847989 None:intergenic
ATTGAGGAGTGGCCACAGAG+AGG 0.708811 3_1:-73851945 Msa0374400:CDS
GATACGGGCTGAATATGAGG+CGG 0.710767 3_1:-73848455 Msa0374400:CDS
AAATGAGAAGAACGAACGGG+AGG 0.713916 3_1:+73853817 None:intergenic
GGAGGTTGAGAGTGAGACGG+TGG 0.718548 3_1:+73853835 None:intergenic
ACGGGAGGTTGAGAGTGAGA+CGG 0.719482 3_1:+73853832 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAACAAGAATATAAAATAA+TGG + chr3_1:73849344-73849363 None:intergenic 10.0%
!!! TTATTTTTTGATTATTTTGT+TGG - chr3_1:73852562-73852581 Msa0374400:intron 10.0%
!!! TATTTTTTGATTATTTTGTT+GGG - chr3_1:73852563-73852582 Msa0374400:intron 10.0%
!!! TATTTCACAAATAATTTTAT+GGG + chr3_1:73852826-73852845 None:intergenic 10.0%
!!! ATATTTCACAAATAATTTTA+TGG + chr3_1:73852827-73852846 None:intergenic 10.0%
!! ATAAAAAAGAAAACTTTAAT+AGG + chr3_1:73853132-73853151 None:intergenic 10.0%
!! TTATTTATTTATTTAGATGC+TGG - chr3_1:73850905-73850924 Msa0374400:CDS 15.0%
!!! AAATGAGACATTTTTTTTTT+TGG + chr3_1:73851595-73851614 None:intergenic 15.0%
!!! ATAATCAAATAGTTTTTGAA+TGG - chr3_1:73852390-73852409 Msa0374400:intron 15.0%
!! AAAACAATATAAGATTCATT+TGG - chr3_1:73852432-73852451 Msa0374400:intron 15.0%
!!! ATTATTATCACATGTAATTT+TGG - chr3_1:73853458-73853477 Msa0374400:intron 15.0%
!!! TTTTATTTTTTTACAGACTA+CGG + chr3_1:73853800-73853819 None:intergenic 15.0%
!! ATTTCAATAAAATTTGTGTT+TGG - chr3_1:73854286-73854305 Msa0374400:five_prime_UTR 15.0%
!!! TTTTTCCCATAAAAAAGTAT+TGG - chr3_1:73847796-73847815 Msa0374400:three_prime_UTR 20.0%
!!! TTTTCCCATAAAAAAGTATT+GGG - chr3_1:73847797-73847816 Msa0374400:three_prime_UTR 20.0%
!!! TTGATTTCTCTGTAATTTTA+TGG - chr3_1:73848664-73848683 Msa0374400:intron 20.0%
!!! GTTGTTTTTATAAGCTATAT+TGG - chr3_1:73848805-73848824 Msa0374400:intron 20.0%
!!! AAATACGTTAAGAGTATATT+TGG - chr3_1:73848981-73849000 Msa0374400:intron 20.0%
!!! AGTATATTTGGTTTCATTTT+TGG - chr3_1:73848993-73849012 Msa0374400:intron 20.0%
!! AGAATCAATTTAACAATGTT+TGG - chr3_1:73849041-73849060 Msa0374400:intron 20.0%
!! GAATCAATTTAACAATGTTT+GGG - chr3_1:73849042-73849061 Msa0374400:intron 20.0%
!! TTAAATTGATATGTGATTTC+CGG - chr3_1:73849381-73849400 Msa0374400:intron 20.0%
!! TACCTATAATAAGAATATTG+AGG - chr3_1:73850062-73850081 Msa0374400:intron 20.0%
!! ATTACTCCAATTAGATATAT+GGG + chr3_1:73850516-73850535 None:intergenic 20.0%
!! TATTACTCCAATTAGATATA+TGG + chr3_1:73850517-73850536 None:intergenic 20.0%
!!! GAGACAATAAGTTTTTTATT+AGG - chr3_1:73850624-73850643 Msa0374400:intron 20.0%
!!! AATAAATAAGGGTATATTAG+TGG + chr3_1:73851682-73851701 None:intergenic 20.0%
!! GGTTGAAATACAATAAATAA+GGG + chr3_1:73851693-73851712 None:intergenic 20.0%
!!! ACTCAACTCAAATTTTAATT+CGG - chr3_1:73851961-73851980 Msa0374400:CDS 20.0%
!! TATTCATATCTCTTGAAATT+TGG + chr3_1:73852182-73852201 None:intergenic 20.0%
!! TACTTAAGATTATGTATAGT+TGG + chr3_1:73852325-73852344 None:intergenic 20.0%
!!! ATTTTATAACAGTATAGGAA+GGG - chr3_1:73852599-73852618 Msa0374400:intron 20.0%
!! TTGTAATTATTGTTACATAC+AGG - chr3_1:73852660-73852679 Msa0374400:intron 20.0%
!! TGTTGAATAAATATGAACAT+GGG + chr3_1:73852783-73852802 None:intergenic 20.0%
!! ATGTTGAATAAATATGAACA+TGG + chr3_1:73852784-73852803 None:intergenic 20.0%
!! AAATTATTTGTGAAATATGC+AGG - chr3_1:73852829-73852848 Msa0374400:intron 20.0%
!!! TTCTTTTTTATCTGTTTTTC+AGG - chr3_1:73853141-73853160 Msa0374400:intron 20.0%
!!! TCTTTTTTATCTGTTTTTCA+GGG - chr3_1:73853142-73853161 Msa0374400:intron 20.0%
!! AAATCTTAAATGAAGAAGAA+AGG - chr3_1:73853481-73853500 Msa0374400:intron 20.0%
!! CAATAACAATTATGATGTTT+AGG + chr3_1:73853634-73853653 None:intergenic 20.0%
!!! AATTTTACCCTTTATATCAT+TGG - chr3_1:73854004-73854023 Msa0374400:five_prime_UTR 20.0%
!! GAAATCATATAAGAAAAACA+AGG + chr3_1:73854100-73854119 None:intergenic 20.0%
!! GGATTAATAAGAAAACTAAA+AGG + chr3_1:73854132-73854151 None:intergenic 20.0%
!!! AATGTTTTTACATTACAACA+CGG - chr3_1:73854174-73854193 Msa0374400:five_prime_UTR 20.0%
!!! TCATAGATCAATTTCATTTT+GGG + chr3_1:73854230-73854249 None:intergenic 20.0%
!!! ATCATAGATCAATTTCATTT+TGG + chr3_1:73854231-73854250 None:intergenic 20.0%
!!! TCTACCCAATACTTTTTTAT+GGG + chr3_1:73847804-73847823 None:intergenic 25.0%
!!! ATCTACCCAATACTTTTTTA+TGG + chr3_1:73847805-73847824 None:intergenic 25.0%
! TAAAACTCAACGAAACAAAA+TGG - chr3_1:73848066-73848085 Msa0374400:three_prime_UTR 25.0%
!!! ATTTTCAGTGCTTTTTTTCT+TGG - chr3_1:73848546-73848565 Msa0374400:intron 25.0%
! CTTGGATATCAAGATTATTA+GGG + chr3_1:73848957-73848976 None:intergenic 25.0%
! TTGTCTGAATTAATTCTAAC+TGG - chr3_1:73849086-73849105 Msa0374400:intron 25.0%
! TTAGTTAAAAGTGAGCTAAA+TGG + chr3_1:73849212-73849231 None:intergenic 25.0%
!! TCCAAATCAATTTTTGTCAT+CGG - chr3_1:73849243-73849262 Msa0374400:intron 25.0%
! TTAGTTACTTAATGTGTGTT+TGG + chr3_1:73849279-73849298 None:intergenic 25.0%
! TTGAATCAATCATCAAACAA+CGG + chr3_1:73849439-73849458 None:intergenic 25.0%
!! AAACTAAAGCATCAACTAAT+TGG - chr3_1:73849603-73849622 Msa0374400:intron 25.0%
! TTTAATGTAATCACATGTGT+CGG + chr3_1:73849706-73849725 None:intergenic 25.0%
! GTAAAGCTATAAATCTCTTA+TGG + chr3_1:73849821-73849840 None:intergenic 25.0%
!!! CTTTTTTCTTTTCATTGTGA+CGG - chr3_1:73849989-73850008 Msa0374400:intron 25.0%
! CTCCTCAATATTCTTATTAT+AGG + chr3_1:73850067-73850086 None:intergenic 25.0%
! ATAATAAGAATATTGAGGAG+TGG - chr3_1:73850067-73850086 Msa0374400:intron 25.0%
! CAATATTCAGATATAATTGG+TGG + chr3_1:73850175-73850194 None:intergenic 25.0%
! GAGCAATATTCAGATATAAT+TGG + chr3_1:73850178-73850197 None:intergenic 25.0%
!! CATATTTCATGGGAATTTTT+GGG + chr3_1:73850433-73850452 None:intergenic 25.0%
! GTAAAACCCATATATCTAAT+TGG - chr3_1:73850507-73850526 Msa0374400:intron 25.0%
! AATCATGTTTAATAGCTTGA+GGG + chr3_1:73851191-73851210 None:intergenic 25.0%
! AAATCATGTTTAATAGCTTG+AGG + chr3_1:73851192-73851211 None:intergenic 25.0%
! TGGTAAAATAATCATTCGAA+TGG - chr3_1:73851313-73851332 Msa0374400:intron 25.0%
! AAAATAATCATTCGAATGGA+TGG - chr3_1:73851317-73851336 Msa0374400:intron 25.0%
! TCACCTTTAGACTTAATAAA+AGG - chr3_1:73851457-73851476 Msa0374400:intron 25.0%
!! TGACCTTTTATTAAGTCTAA+AGG + chr3_1:73851463-73851482 None:intergenic 25.0%
! GGGTTGAAATACAATAAATA+AGG + chr3_1:73851694-73851713 None:intergenic 25.0%
! ATGAGAAACTTATAATGAGA+TGG - chr3_1:73851826-73851845 Msa0374400:intron 25.0%
! AACAATTGTAGCAAAGATTT+AGG + chr3_1:73852277-73852296 None:intergenic 25.0%
!!! TTTTTGATTATTTTGTTGGG+AGG - chr3_1:73852566-73852585 Msa0374400:intron 25.0%
!!! TTTTGATTATTTTGTTGGGA+GGG - chr3_1:73852567-73852586 Msa0374400:intron 25.0%
!! GATTTTATAACAGTATAGGA+AGG - chr3_1:73852598-73852617 Msa0374400:intron 25.0%
! AAAAAAGGATGAAGATCTAT+TGG - chr3_1:73852692-73852711 Msa0374400:intron 25.0%
!!! TGTTTTGTGCATTTTTAGAT+GGG - chr3_1:73852976-73852995 Msa0374400:intron 25.0%
! GAAAACTTTAATAGGTGATT+TGG + chr3_1:73853124-73853143 None:intergenic 25.0%
! ATATCTGTTTGGAAACTAAT+TGG - chr3_1:73853673-73853692 Msa0374400:intron 25.0%
!!! CACTTGTTATTTTTTTCCTT+TGG - chr3_1:73853740-73853759 Msa0374400:CDS 25.0%
!! AGATTTTCTTCTTACTTGTA+GGG + chr3_1:73853983-73854002 None:intergenic 25.0%
! CTGAAATCCAATGATATAAA+GGG + chr3_1:73854014-73854033 None:intergenic 25.0%
! GAGAATCAGAAAAATTGAAA+TGG + chr3_1:73854078-73854097 None:intergenic 25.0%
!! CATAGATCAATTTCATTTTG+GGG + chr3_1:73854229-73854248 None:intergenic 25.0%
!! AGAGTCATTTTCATGTACTT+GGG + chr3_1:73847859-73847878 None:intergenic 30.0%
!! AAGAGTCATTTTCATGTACT+TGG + chr3_1:73847860-73847879 None:intergenic 30.0%
AAGTACATGAAAATGACTCT+TGG - chr3_1:73847859-73847878 Msa0374400:three_prime_UTR 30.0%
AGTACATGAAAATGACTCTT+GGG - chr3_1:73847860-73847879 Msa0374400:three_prime_UTR 30.0%
AATAAGATGGGTCAAGTATA+AGG - chr3_1:73847883-73847902 Msa0374400:three_prime_UTR 30.0%
!! ACAAGAAGTAGAGTTTTGAT+TGG - chr3_1:73847963-73847982 Msa0374400:three_prime_UTR 30.0%
ATGAAAATGAGAAGAACGAA+CGG + chr3_1:73848213-73848232 None:intergenic 30.0%
!! TAAGTTTTGTGAGACTGTTT+AGG + chr3_1:73848896-73848915 None:intergenic 30.0%
CCTTGGATATCAAGATTATT+AGG + chr3_1:73848958-73848977 None:intergenic 30.0%
CCTAATAATCTTGATATCCA+AGG - chr3_1:73848955-73848974 Msa0374400:intron 30.0%
TTCAGACAAAATCAATCCTA+CGG + chr3_1:73849075-73849094 None:intergenic 30.0%
ATTAATTCTAACTGGAAGCT+AGG - chr3_1:73849094-73849113 Msa0374400:CDS 30.0%
TTAATTCTAACTGGAAGCTA+GGG - chr3_1:73849095-73849114 Msa0374400:CDS 30.0%
AAATGGAAGTGGTTTATGTT+TGG + chr3_1:73849195-73849214 None:intergenic 30.0%
CATTAAGTAACTAAGTTCCT+TGG - chr3_1:73849285-73849304 Msa0374400:intron 30.0%
GTCAGTGACTCATATTATTA+GGG - chr3_1:73849307-73849326 Msa0374400:CDS 30.0%
TCAGTGACTCATATTATTAG+GGG - chr3_1:73849308-73849327 Msa0374400:CDS 30.0%
TGTTAATGGAACACTAAAAC+CGG + chr3_1:73849403-73849422 None:intergenic 30.0%
ACGATACACTATAAATTGTC+TGG - chr3_1:73849467-73849486 Msa0374400:intron 30.0%
! TGTCATATGATTTGTAGCAT+AGG - chr3_1:73849958-73849977 Msa0374400:intron 30.0%
TTCAAATCTTAAGCTACCAT+TGG + chr3_1:73850109-73850128 None:intergenic 30.0%
!! TTTGAAGTTGAGTTGAAACA+TGG - chr3_1:73850123-73850142 Msa0374400:intron 30.0%
TAATGAATACATACCAGCAT+TGG + chr3_1:73850151-73850170 None:intergenic 30.0%
TTATATCTGAATATTGCTCG+TGG - chr3_1:73850179-73850198 Msa0374400:intron 30.0%
GAAGTTTCAATGCATTTACA+AGG + chr3_1:73850234-73850253 None:intergenic 30.0%
AATATTTGTCTTTGATTGGC+TGG + chr3_1:73850258-73850277 None:intergenic 30.0%
CCTGAATATTTGTCTTTGAT+TGG + chr3_1:73850262-73850281 None:intergenic 30.0%
CCAATCAAAGACAAATATTC+AGG - chr3_1:73850259-73850278 Msa0374400:intron 30.0%
ATCAATCTTGAAGTCAAAGT+AGG + chr3_1:73850345-73850364 None:intergenic 30.0%
! ACCATTTTCTTTGAATCTTC+AGG - chr3_1:73850397-73850416 Msa0374400:intron 30.0%
TCCTGAAGATTCAAAGAAAA+TGG + chr3_1:73850401-73850420 None:intergenic 30.0%
! CCATATTTCATGGGAATTTT+TGG + chr3_1:73850434-73850453 None:intergenic 30.0%
CCAAAAATTCCCATGAAATA+TGG - chr3_1:73850431-73850450 Msa0374400:intron 30.0%
TCTACTCTTCCATATTTCAT+GGG + chr3_1:73850443-73850462 None:intergenic 30.0%
! TTAGATATATGGGTTTTACC+AGG + chr3_1:73850506-73850525 None:intergenic 30.0%
TGGATAAGCTACTGTTAATT+TGG - chr3_1:73850587-73850606 Msa0374400:intron 30.0%
GGATAAGCTACTGTTAATTT+GGG - chr3_1:73850588-73850607 Msa0374400:intron 30.0%
AACAGTTAGCCATATAGAAA+TGG - chr3_1:73850659-73850678 Msa0374400:intron 30.0%
!!! TGATGATATGATGCCTTTTT+TGG - chr3_1:73850739-73850758 Msa0374400:intron 30.0%
!!! TATGATGCCTTTTTTGGTTT+TGG - chr3_1:73850745-73850764 Msa0374400:intron 30.0%
AACCAAACCAAAACCAAAAA+AGG + chr3_1:73850755-73850774 None:intergenic 30.0%
TCCAATGTAAACAAGCAATT+TGG - chr3_1:73850788-73850807 Msa0374400:intron 30.0%
TCCAAATTGCTTGTTTACAT+TGG + chr3_1:73850792-73850811 None:intergenic 30.0%
CAATTTGGACAGGTTTAATT+TGG - chr3_1:73850803-73850822 Msa0374400:intron 30.0%
CCGAAAAAACTAGTAAACTA+GGG + chr3_1:73850864-73850883 None:intergenic 30.0%
!!! CCCTAGTTTACTAGTTTTTT+CGG - chr3_1:73850861-73850880 Msa0374400:intron 30.0%
ACCGAAAAAACTAGTAAACT+AGG + chr3_1:73850865-73850884 None:intergenic 30.0%
TATCATGTTATTGTATCTGC+AGG - chr3_1:73851059-73851078 Msa0374400:CDS 30.0%
TTAATAGCTTGAGGGTAAAA+AGG + chr3_1:73851183-73851202 None:intergenic 30.0%
! TAGTTTGAAGCTATAGATGA+TGG - chr3_1:73851293-73851312 Msa0374400:intron 30.0%
!! ATGACTTGAAGGTGTTATAA+GGG + chr3_1:73851361-73851380 None:intergenic 30.0%
!! AATGACTTGAAGGTGTTATA+AGG + chr3_1:73851362-73851381 None:intergenic 30.0%
TATAACACCTTCAAGTCATT+TGG - chr3_1:73851362-73851381 Msa0374400:intron 30.0%
AGAAACTTATAATGAGATGG+AGG - chr3_1:73851829-73851848 Msa0374400:intron 30.0%
GAAACTTATAATGAGATGGA+GGG - chr3_1:73851830-73851849 Msa0374400:intron 30.0%
! TGATGATGATTTCTTGATGA+TGG + chr3_1:73851880-73851899 None:intergenic 30.0%
! CCACTTATAAACACATTTTC+AGG + chr3_1:73852111-73852130 None:intergenic 30.0%
CCTGAAAATGTGTTTATAAG+TGG - chr3_1:73852108-73852127 Msa0374400:intron 30.0%
TTTCTCATTCTACAGAAAGA+TGG - chr3_1:73852456-73852475 Msa0374400:intron 30.0%
TTCTCATTCTACAGAAAGAT+GGG - chr3_1:73852457-73852476 Msa0374400:intron 30.0%
!! TTTGATTATTTTGTTGGGAG+GGG - chr3_1:73852568-73852587 Msa0374400:intron 30.0%
! GGGTGATTTTATAACAGTAT+AGG - chr3_1:73852594-73852613 Msa0374400:intron 30.0%
TACAGGACATCAAAGAAAAA+AGG - chr3_1:73852677-73852696 Msa0374400:intron 30.0%
! ATTCAGCAATTTTACCTTGA+AGG + chr3_1:73852754-73852773 None:intergenic 30.0%
!! CTGTTTTGTGCATTTTTAGA+TGG - chr3_1:73852975-73852994 Msa0374400:intron 30.0%
ATGCAGACATGAAAAAGAAA+AGG + chr3_1:73853060-73853079 None:intergenic 30.0%
! TTCATTTTCTTGATGCTTGT+TGG - chr3_1:73853269-73853288 Msa0374400:intron 30.0%
!! AAGAAGCTATTTTCAAATCG+TGG - chr3_1:73853434-73853453 Msa0374400:intron 30.0%
!! AGAAGCTATTTTCAAATCGT+GGG - chr3_1:73853435-73853454 Msa0374400:intron 30.0%
! CATAATTGTTATTGCTGCTT+TGG - chr3_1:73853640-73853659 Msa0374400:intron 30.0%
!!! GCTATTTTGACATATCTGTT+TGG - chr3_1:73853662-73853681 Msa0374400:intron 30.0%
GAAATTCACTACAAGTGAAT+CGG - chr3_1:73853709-73853728 Msa0374400:intron 30.0%
AAAAACAAATACTCCACTAC+TGG - chr3_1:73853861-73853880 Msa0374400:CDS 30.0%
! AGTATAAATGTAGGGGTATA+TGG + chr3_1:73853955-73853974 None:intergenic 30.0%
! GATTTTCTTCTTACTTGTAG+GGG + chr3_1:73853982-73854001 None:intergenic 30.0%
! GAGATTTTCTTCTTACTTGT+AGG + chr3_1:73853984-73854003 None:intergenic 30.0%
GCTGAAATCCAATGATATAA+AGG + chr3_1:73854015-73854034 None:intergenic 30.0%
CAGAAAAATTGAAATGGTGA+AGG + chr3_1:73854072-73854091 None:intergenic 30.0%
ATTCGTAGATGCAAAATTGA+AGG + chr3_1:73854157-73854176 None:intergenic 30.0%
TACAACACGGAAAAGAATAA+TGG - chr3_1:73854187-73854206 Msa0374400:five_prime_UTR 30.0%
ATGCAAGTATGAGTAGAAGA+TGG + chr3_1:73847747-73847766 None:intergenic 35.0%
!! AAAAGTATTGGGTAGATGAG+TGG - chr3_1:73847808-73847827 Msa0374400:three_prime_UTR 35.0%
AATGACTCTTGGGAATAAGA+TGG - chr3_1:73847870-73847889 Msa0374400:three_prime_UTR 35.0%
ATGACTCTTGGGAATAAGAT+GGG - chr3_1:73847871-73847890 Msa0374400:three_prime_UTR 35.0%
!! TGTGTTTTGGATGATAATCC+TGG + chr3_1:73847994-73848013 None:intergenic 35.0%
GGATTATCATCCAAAACACA+AGG - chr3_1:73847994-73848013 Msa0374400:three_prime_UTR 35.0%
! CTTTTCTTCTCCTTGTGTTT+TGG + chr3_1:73848007-73848026 None:intergenic 35.0%
TGAAAATGAGAAGAACGAAC+GGG + chr3_1:73848212-73848231 None:intergenic 35.0%
TTCTCACATCTTTCTCAATC+AGG - chr3_1:73848291-73848310 Msa0374400:three_prime_UTR 35.0%
GTTTGTGTTAATTGCGTTTG+CGG - chr3_1:73848380-73848399 Msa0374400:CDS 35.0%
! TAAGTTCTGTCATCCTCTTT+TGG - chr3_1:73848521-73848540 Msa0374400:intron 35.0%
GCACTGAAAATTACCAAAAG+AGG + chr3_1:73848537-73848556 None:intergenic 35.0%
! GATTTAGCGTTTTCTTTGTC+TGG - chr3_1:73848610-73848629 Msa0374400:intron 35.0%
TTATTAGGGTCTGTTTGGAT+TGG + chr3_1:73848943-73848962 None:intergenic 35.0%
CAAGATTATTAGGGTCTGTT+TGG + chr3_1:73848948-73848967 None:intergenic 35.0%
! CTCTTAACGTATTTTCACCT+TGG + chr3_1:73848975-73848994 None:intergenic 35.0%
AAAAGTGAGCTAAATGGAAG+TGG + chr3_1:73849206-73849225 None:intergenic 35.0%
GCCGATGACAAAAATTGATT+TGG + chr3_1:73849247-73849266 None:intergenic 35.0%
ATAATATGAGTCACTGACCA+AGG + chr3_1:73849305-73849324 None:intergenic 35.0%
GGTCAGTGACTCATATTATT+AGG - chr3_1:73849306-73849325 Msa0374400:CDS 35.0%
!! TTCTTTGCACTAGTCTTTGT+AGG + chr3_1:73849502-73849521 None:intergenic 35.0%
AATTGGCCAACATGATATTG+TGG - chr3_1:73849620-73849639 Msa0374400:intron 35.0%
TCTATGCCACAATATCATGT+TGG + chr3_1:73849629-73849648 None:intergenic 35.0%
! CAACTCAGAGTTTGATAACT+AGG + chr3_1:73849905-73849924 None:intergenic 35.0%
ATATACCAGCCACATATAGA+TGG - chr3_1:73849930-73849949 Msa0374400:intron 35.0%
TTCTATGTGACAGATTCGTT+TGG - chr3_1:73850023-73850042 Msa0374400:intron 35.0%
TCTATGTGACAGATTCGTTT+GGG - chr3_1:73850024-73850043 Msa0374400:intron 35.0%
TTCTTATGAGCTGCAATTTC+AGG - chr3_1:73850208-73850227 Msa0374400:intron 35.0%
TTGAAGTCAAAGTAGGACTT+AGG + chr3_1:73850338-73850357 None:intergenic 35.0%
GTCTACTCTTCCATATTTCA+TGG + chr3_1:73850444-73850463 None:intergenic 35.0%
AATTTCTTCTTTGCCTCTGT+AGG - chr3_1:73850548-73850567 Msa0374400:intron 35.0%
!!! TGCCTTTTTTGGTTTTGGTT+TGG - chr3_1:73850750-73850769 Msa0374400:intron 35.0%
TGTAAACAAGCAATTTGGAC+AGG - chr3_1:73850793-73850812 Msa0374400:intron 35.0%
AACAACCCAGAAATCGAAAA+CGG + chr3_1:73850829-73850848 None:intergenic 35.0%
! AATACCCTGTGTTTTCCATA+AGG - chr3_1:73850991-73851010 Msa0374400:intron 35.0%
CAGGAAATTGTTGCATTATC+TGG - chr3_1:73851078-73851097 Msa0374400:CDS 35.0%
CAAACCTGAGACTAAATACA+CGG - chr3_1:73851146-73851165 Msa0374400:intron 35.0%
TATACCGTGTATTTAGTCTC+AGG + chr3_1:73851153-73851172 None:intergenic 35.0%
ACACTTATTACTGAGACAGA+AGG + chr3_1:73851556-73851575 None:intergenic 35.0%
GGTAATATCTCATCGAATGT+GGG + chr3_1:73852090-73852109 None:intergenic 35.0%
AGGTAATATCTCATCGAATG+TGG + chr3_1:73852091-73852110 None:intergenic 35.0%
!! GTACTCCTAATTTTAGAAGC+CGG - chr3_1:73852130-73852149 Msa0374400:intron 35.0%
!! CAAAACCGGCTTCTAAAATT+AGG + chr3_1:73852138-73852157 None:intergenic 35.0%
!! ATTTTAGAAGCCGGTTTTGT+AGG - chr3_1:73852139-73852158 Msa0374400:intron 35.0%
!! TTTTAGAAGCCGGTTTTGTA+GGG - chr3_1:73852140-73852159 Msa0374400:intron 35.0%
AAGTAAACTGAAGTAAGCCA+TGG + chr3_1:73852240-73852259 None:intergenic 35.0%
GAAGATACACAAAACTTGAC+AGG + chr3_1:73852354-73852373 None:intergenic 35.0%
GTTTGACAACTCTTACTTCA+AGG - chr3_1:73852524-73852543 Msa0374400:intron 35.0%
! AGCAATTTTACCTTGAAGGA+AGG + chr3_1:73852750-73852769 None:intergenic 35.0%
TGAGAAATATGCTGTAGATC+AGG - chr3_1:73852859-73852878 Msa0374400:intron 35.0%
! GTTCATTGTTTCTCTATTCC+TGG - chr3_1:73853349-73853368 Msa0374400:intron 35.0%
ATGCTATGAGGAAGAAGATA+CGG - chr3_1:73853552-73853571 Msa0374400:CDS 35.0%
!! TTGACTTTAGAGCCTTATCT+GGG + chr3_1:73853604-73853623 None:intergenic 35.0%
!! TTTGACTTTAGAGCCTTATC+TGG + chr3_1:73853605-73853624 None:intergenic 35.0%
CATTAATACGCAAATGCCAA+AGG + chr3_1:73853759-73853778 None:intergenic 35.0%
GTATAATTTCCTTAGTCCTC+TGG + chr3_1:73853933-73853952 None:intergenic 35.0%
! GGGTGAAAGTATAAATGTAG+GGG + chr3_1:73853962-73853981 None:intergenic 35.0%
! GGGGTGAAAGTATAAATGTA+GGG + chr3_1:73853963-73853982 None:intergenic 35.0%
! AGGGGTGAAAGTATAAATGT+AGG + chr3_1:73853964-73853983 None:intergenic 35.0%
AATTGAAATGGTGAAGGAGA+AGG + chr3_1:73854066-73854085 None:intergenic 35.0%
GTAGATGCAAAATTGAAGGA+AGG + chr3_1:73854153-73854172 None:intergenic 35.0%
GTACTTGGGATTCAAGTGTT+TGG + chr3_1:73847845-73847864 None:intergenic 40.0%
AGATGGGTCAAGTATAAGGT+AGG - chr3_1:73847887-73847906 Msa0374400:three_prime_UTR 40.0%
GTCAAGTATAAGGTAGGACT+AGG - chr3_1:73847893-73847912 Msa0374400:three_prime_UTR 40.0%
AAACCTACACAAGCATATCG+TGG - chr3_1:73847926-73847945 Msa0374400:three_prime_UTR 40.0%
AATCCACGATATGCTTGTGT+AGG + chr3_1:73847932-73847951 None:intergenic 40.0%
!!! GAGTTTTGATTGGCAAATCC+AGG - chr3_1:73847973-73847992 Msa0374400:three_prime_UTR 40.0%
AGAAAGATGTGAGAAATGCG+AGG + chr3_1:73848286-73848305 None:intergenic 40.0%
AAGCGCTAGAGAAGATATCA+AGG - chr3_1:73848485-73848504 Msa0374400:CDS 40.0%
GCTTGTTTGAGCTTATCTAC+TGG + chr3_1:73848921-73848940 None:intergenic 40.0%
! ATGTTTGGGTGTTTTTCCGT+AGG - chr3_1:73849056-73849075 Msa0374400:intron 40.0%
TCCATTAACAGTGTCTTTGC+TGG - chr3_1:73849413-73849432 Msa0374400:CDS 40.0%
!! GTAATCACATGTGTCGGTTT+CGG + chr3_1:73849700-73849719 None:intergenic 40.0%
GACAAAGCTCCATCTATATG+TGG + chr3_1:73849942-73849961 None:intergenic 40.0%
TCTTTGAATCTTCAGGAAGC+TGG - chr3_1:73850404-73850423 Msa0374400:intron 40.0%
!! TAGGATTCTAGGACATGGAT+TGG - chr3_1:73850567-73850586 Msa0374400:intron 40.0%
TAGCCATATAGAAATGGCTG+TGG - chr3_1:73850665-73850684 Msa0374400:intron 40.0%
CAACCACAGCCATTTCTATA+TGG + chr3_1:73850671-73850690 None:intergenic 40.0%
!! ATTTGGCCGTTTTCGATTTC+TGG - chr3_1:73850820-73850839 Msa0374400:intron 40.0%
!! TTTGGCCGTTTTCGATTTCT+GGG - chr3_1:73850821-73850840 Msa0374400:intron 40.0%
! CGTCAAGTTTTCTACCGAAT+GGG - chr3_1:73850953-73850972 Msa0374400:intron 40.0%
! GTCAAGTTTTCTACCGAATG+GGG - chr3_1:73850954-73850973 Msa0374400:intron 40.0%
CCATCCTTATGGAAAACACA+GGG + chr3_1:73850998-73851017 None:intergenic 40.0%
! CCTGTGTTTTCCATAAGGAT+GGG - chr3_1:73850996-73851015 Msa0374400:intron 40.0%
! CTGTGTTTTCCATAAGGATG+GGG - chr3_1:73850997-73851016 Msa0374400:intron 40.0%
! TGTGTTTTCCATAAGGATGG+GGG - chr3_1:73850998-73851017 Msa0374400:intron 40.0%
AATACTTACCCCCATCCTTA+TGG + chr3_1:73851009-73851028 None:intergenic 40.0%
ATAAGGATGGGGGTAAGTAT+TGG - chr3_1:73851008-73851027 Msa0374400:intron 40.0%
TGCTCAACCAAATGACTTGA+AGG + chr3_1:73851372-73851391 None:intergenic 40.0%
! TCGCGTTAGTCTGATAACAT+CGG - chr3_1:73851406-73851425 Msa0374400:intron 40.0%
! AAGAGCGATTGCTCTTTTGT+TGG - chr3_1:73851500-73851519 Msa0374400:intron 40.0%
! AGAGCGATTGCTCTTTTGTT+GGG - chr3_1:73851501-73851520 Msa0374400:intron 40.0%
TACTGAGACAGAAGGAATCA+AGG + chr3_1:73851548-73851567 None:intergenic 40.0%
!! GATGGAGGGAGTATTACTTT+AGG - chr3_1:73851844-73851863 Msa0374400:intron 40.0%
CATCATCAATGCAACATCTC+TGG - chr3_1:73851898-73851917 Msa0374400:CDS 40.0%
CTAACTCAACCCTACAAAAC+CGG + chr3_1:73852152-73852171 None:intergenic 40.0%
AAACTGAAGTAAGCCATGGA+AGG + chr3_1:73852236-73852255 None:intergenic 40.0%
! GTTTTGTGTATCTTCAGAGC+TGG - chr3_1:73852359-73852378 Msa0374400:intron 40.0%
!! ATTATTTTGTTGGGAGGGGA+GGG - chr3_1:73852572-73852591 Msa0374400:intron 40.0%
TAACAGTATAGGAAGGGAAG+AGG - chr3_1:73852605-73852624 Msa0374400:intron 40.0%
TCAAAAAGAGCAGCATCAGT+TGG + chr3_1:73852723-73852742 None:intergenic 40.0%
! TTTTGACGATCCTTCCTTCA+AGG - chr3_1:73852737-73852756 Msa0374400:intron 40.0%
!!! ATCTGTTTTTCAGGGCATTG+TGG - chr3_1:73853150-73853169 Msa0374400:intron 40.0%
AGATGGTTCTCCAAATGTAG+TGG - chr3_1:73853174-73853193 Msa0374400:intron 40.0%
GATGGTTCTCCAAATGTAGT+GGG - chr3_1:73853175-73853194 Msa0374400:intron 40.0%
AACTTCTCTCCCACTACATT+TGG + chr3_1:73853187-73853206 None:intergenic 40.0%
AACCTTTCCAGAGGAGTAAT+TGG + chr3_1:73853218-73853237 None:intergenic 40.0%
CAAGCTTAAAACCTTTCCAG+AGG + chr3_1:73853227-73853246 None:intergenic 40.0%
! TTTTACTCCTGCATCAAACC+AGG + chr3_1:73853370-73853389 None:intergenic 40.0%
TGCTATGAGGAAGAAGATAC+GGG - chr3_1:73853553-73853572 Msa0374400:CDS 40.0%
CTGGAGAGTTGGAACAATTA+CGG - chr3_1:73853880-73853899 Msa0374400:CDS 40.0%
TGGAGAGTTGGAACAATTAC+GGG - chr3_1:73853881-73853900 Msa0374400:CDS 40.0%
! TGGAACAATTACGGGTTTTC+TGG - chr3_1:73853889-73853908 Msa0374400:CDS 40.0%
AAACAATGTGATAGAGCCAG+AGG - chr3_1:73853914-73853933 Msa0374400:CDS 40.0%
! AGAGATGGAATCAGCTTTGT+GGG + chr3_1:73854038-73854057 None:intergenic 40.0%
ACTCTCTTCACCAACCACAA+TGG - chr3_1:73848114-73848133 Msa0374400:three_prime_UTR 45.0%
GTGATTGTAGCCATTGTGGT+TGG + chr3_1:73848127-73848146 None:intergenic 45.0%
ACCACAATGGCTACAATCAC+CGG - chr3_1:73848127-73848146 Msa0374400:three_prime_UTR 45.0%
AAATGAGAAGAACGAACGGG+AGG + chr3_1:73848209-73848228 None:intergenic 45.0%
CAAGCAATTGAGCGAGGAAA+CGG + chr3_1:73848254-73848273 None:intergenic 45.0%
!! TTTGCGGTTTTTCAGCGAAG+AGG - chr3_1:73848396-73848415 Msa0374400:CDS 45.0%
! CTAGCGCTTTTCAACTGATC+AGG + chr3_1:73848474-73848493 None:intergenic 45.0%
GCCAGCAAAGACACTGTTAA+TGG + chr3_1:73849417-73849436 None:intergenic 45.0%
!! TAACAAAGGCGTCGACTTGT+CGG - chr3_1:73849746-73849765 Msa0374400:intron 45.0%
AAGCTCCATCTATATGTGGC+TGG + chr3_1:73849938-73849957 None:intergenic 45.0%
TGTGACAGATTCGTTTGGGA+TGG - chr3_1:73850028-73850047 Msa0374400:intron 45.0%
TTGAAACATGGAGCCAATGC+TGG - chr3_1:73850135-73850154 Msa0374400:intron 45.0%
TTGAATCTTCAGGAAGCTGG+AGG - chr3_1:73850407-73850426 Msa0374400:intron 45.0%
TATGGAAGAGTAGACGTCAC+TGG - chr3_1:73850449-73850468 Msa0374400:intron 45.0%
CTGAACAATGCCCTGAAGAA+GGG - chr3_1:73850474-73850493 Msa0374400:intron 45.0%
CTTTGCCTCTGTAGGATTCT+AGG - chr3_1:73850556-73850575 Msa0374400:intron 45.0%
CATGTCCTAGAATCCTACAG+AGG + chr3_1:73850564-73850583 None:intergenic 45.0%
!! CTCTGTAGGATTCTAGGACA+TGG - chr3_1:73850562-73850581 Msa0374400:intron 45.0%
! GCGTCAAGTTTTCTACCGAA+TGG - chr3_1:73850952-73850971 Msa0374400:intron 45.0%
CCTTGTCATTCAACCCCATT+CGG + chr3_1:73850970-73850989 None:intergenic 45.0%
! CCCTGTGTTTTCCATAAGGA+TGG - chr3_1:73850995-73851014 Msa0374400:intron 45.0%
CCCATCCTTATGGAAAACAC+AGG + chr3_1:73850999-73851018 None:intergenic 45.0%
CCATACAAAACCAGCTTGTG+AGG + chr3_1:73851932-73851951 None:intergenic 45.0%
!!! CCTCACAAGCTGGTTTTGTA+TGG - chr3_1:73851929-73851948 Msa0374400:CDS 45.0%
AGAACCTTCCTAACAACCGT+TGG - chr3_1:73851988-73852007 Msa0374400:CDS 45.0%
GAACCTTCCTAACAACCGTT+GGG - chr3_1:73851989-73852008 Msa0374400:CDS 45.0%
CCATGGAAGGTCTACACAAA+CGG + chr3_1:73852223-73852242 None:intergenic 45.0%
ATTCTACAGAAAGATGGGCC+AGG - chr3_1:73852462-73852481 Msa0374400:intron 45.0%
CTTTAACCATTGTGCAGTCC+AGG + chr3_1:73852505-73852524 None:intergenic 45.0%
!! GATTATTTTGTTGGGAGGGG+AGG - chr3_1:73852571-73852590 Msa0374400:intron 45.0%
!! TTATTTTGTTGGGAGGGGAG+GGG - chr3_1:73852573-73852592 Msa0374400:intron 45.0%
CAGGTTCAAACTTTGCTCCA+AGG + chr3_1:73852931-73852950 None:intergenic 45.0%
AGCAAAGTTTGAACCTGCAG+AGG - chr3_1:73852934-73852953 Msa0374400:intron 45.0%
!! TTTCAGGGCATTGTGGTAGA+TGG - chr3_1:73853157-73853176 Msa0374400:intron 45.0%
! AGCCAATTACTCCTCTGGAA+AGG - chr3_1:73853213-73853232 Msa0374400:intron 45.0%
! CTCTATTCCTGGTTTGATGC+AGG - chr3_1:73853360-73853379 Msa0374400:intron 45.0%
AAGAGCTGTCTGATGCTATG+AGG - chr3_1:73853540-73853559 Msa0374400:CDS 45.0%
! GAAGATACGGGCTGAATATG+AGG - chr3_1:73853565-73853584 Msa0374400:CDS 45.0%
ATACTCCACTACTGGAGAGT+TGG - chr3_1:73853869-73853888 Msa0374400:CDS 45.0%
TTGTTCCAACTCTCCAGTAG+TGG + chr3_1:73853877-73853896 None:intergenic 45.0%
! GAGATGGAATCAGCTTTGTG+GGG + chr3_1:73854037-73854056 None:intergenic 45.0%
GAGAGATGGAATCAGCTTTG+TGG + chr3_1:73854039-73854058 None:intergenic 45.0%
AAGGAGAAGGAAGAGAGAGA+TGG + chr3_1:73854053-73854072 None:intergenic 45.0%
!!! AATTTTTTTAAAATTAACAA+AGG - chr3_1:73849732-73849751 Msa0374400:intron 5.0%
!! ATTATATATAATTTAATGAA+AGG - chr3_1:73853298-73853317 Msa0374400:intron 5.0%
!! GTGGTTGGTGAAGAGAGTGA+AGG + chr3_1:73848112-73848131 None:intergenic 50.0%
ATTGAGCGAGGAAACGGAAC+TGG + chr3_1:73848248-73848267 None:intergenic 50.0%
AGAACGCAAGCAATTGAGCG+AGG + chr3_1:73848260-73848279 None:intergenic 50.0%
AGGAGAAGTTCGTGCTTCGA+GGG - chr3_1:73848416-73848435 Msa0374400:CDS 50.0%
GTTAGCTAGTGCTACAGCTG+TGG - chr3_1:73850306-73850325 Msa0374400:intron 50.0%
!! CCTTCTTCAGGGCATTGTTC+AGG + chr3_1:73850476-73850495 None:intergenic 50.0%
CCTGAACAATGCCCTGAAGA+AGG - chr3_1:73850473-73850492 Msa0374400:intron 50.0%
CAGGAAGTCTCCCTTCTTCA+GGG + chr3_1:73850487-73850506 None:intergenic 50.0%
AAATGATCCGCAGGTGAAGG+GGG + chr3_1:73850932-73850951 None:intergenic 50.0%
CAAATGATCCGCAGGTGAAG+GGG + chr3_1:73850933-73850952 None:intergenic 50.0%
GCAAATGATCCGCAGGTGAA+GGG + chr3_1:73850934-73850953 None:intergenic 50.0%
ACTTGACGCAAATGATCCGC+AGG + chr3_1:73850941-73850960 None:intergenic 50.0%
CCGAATGGGGTTGAATGACA+AGG - chr3_1:73850967-73850986 Msa0374400:intron 50.0%
ATTATCTGGTGCGCACACAC+TGG - chr3_1:73851092-73851111 Msa0374400:CDS 50.0%
TTATCTGGTGCGCACACACT+GGG - chr3_1:73851093-73851112 Msa0374400:CDS 50.0%
TAACATCGGTCTCTGCTGAG+AGG - chr3_1:73851420-73851439 Msa0374400:intron 50.0%
CCGTTTGTGTAGACCTTCCA+TGG - chr3_1:73852220-73852239 Msa0374400:intron 50.0%
GACAATCCTGGACTGCACAA+TGG - chr3_1:73852496-73852515 Msa0374400:intron 50.0%
! TATTTTGTTGGGAGGGGAGG+GGG - chr3_1:73852574-73852593 Msa0374400:intron 50.0%
GTATAGGAAGGGAAGAGGAG+AGG - chr3_1:73852610-73852629 Msa0374400:intron 50.0%
CATGCCAAACTCAGCAACCT+TGG - chr3_1:73852911-73852930 Msa0374400:intron 50.0%
TGCTCCAAGGTTGCTGAGTT+TGG + chr3_1:73852918-73852937 None:intergenic 50.0%
GTAGCAGCCAATTACTCCTC+TGG - chr3_1:73853208-73853227 Msa0374400:intron 50.0%
! GATACGGGCTGAATATGAGG+CGG - chr3_1:73853568-73853587 Msa0374400:CDS 50.0%
GTGATAGAGCCAGAGGACTA+AGG - chr3_1:73853921-73853940 Msa0374400:CDS 50.0%
GCCGGTGATTGTAGCCATTG+TGG + chr3_1:73848131-73848150 None:intergenic 55.0%
ACGGGAGGTTGAGAGTGAGA+CGG + chr3_1:73848194-73848213 None:intergenic 55.0%
GAGGAGAAGTTCGTGCTTCG+AGG - chr3_1:73848415-73848434 Msa0374400:CDS 55.0%
GGAGAAGTTCGTGCTTCGAG+GGG - chr3_1:73848417-73848436 Msa0374400:CDS 55.0%
! TTCGAGGGGACGATTCGGAA+CGG - chr3_1:73848431-73848450 Msa0374400:CDS 55.0%
! CGTTTGGGATGGCATGATGC+TGG - chr3_1:73850039-73850058 Msa0374400:intron 55.0%
ATTGAGGAGTGGCCACAGAG+AGG - chr3_1:73850078-73850097 Msa0374400:intron 55.0%
AGCTAGTGCTACAGCTGTGG+AGG - chr3_1:73850309-73850328 Msa0374400:intron 55.0%
CCAGGAAGTCTCCCTTCTTC+AGG + chr3_1:73850488-73850507 None:intergenic 55.0%
CCTGAAGAAGGGAGACTTCC+TGG - chr3_1:73850485-73850504 Msa0374400:intron 55.0%
AATGATCCGCAGGTGAAGGG+GGG + chr3_1:73850931-73850950 None:intergenic 55.0%
CGCAAATGATCCGCAGGTGA+AGG + chr3_1:73850935-73850954 None:intergenic 55.0%
TATCTGGTGCGCACACACTG+GGG - chr3_1:73851094-73851113 Msa0374400:CDS 55.0%
TGGCCCAACGGTTGTTAGGA+AGG + chr3_1:73851995-73852014 None:intergenic 55.0%
TCCAGATGTCACGTCCTCCT+GGG - chr3_1:73852042-73852061 Msa0374400:intron 55.0%
CAACGTGAACAGACCTCTGC+AGG + chr3_1:73852950-73852969 None:intergenic 55.0%
GCTGAATATGAGGCGGTTGG+CGG - chr3_1:73853575-73853594 Msa0374400:CDS 55.0%
TGAGAGTGAGACGGTGGCTC+TGG + chr3_1:73848185-73848204 None:intergenic 60.0%
GGAGGTTGAGAGTGAGACGG+TGG + chr3_1:73848191-73848210 None:intergenic 60.0%
CGTGCTTCGAGGGGACGATT+CGG - chr3_1:73848426-73848445 Msa0374400:CDS 60.0%
! GCACCGACACCTCTGATCGA+AGG - chr3_1:73849663-73849682 Msa0374400:intron 60.0%
! GCGCCTTCGATCAGAGGTGT+CGG + chr3_1:73849669-73849688 None:intergenic 60.0%
!! CCATTGGCTCCACCTCTCTG+TGG + chr3_1:73850093-73850112 None:intergenic 60.0%
CCACAGAGAGGTGGAGCCAA+TGG - chr3_1:73850090-73850109 Msa0374400:intron 60.0%
TAGACCAGACCGCAGTGGCT+GGG - chr3_1:73851122-73851141 Msa0374400:intron 60.0%
GGTCTCTGCTGAGAGGCTTG+TGG - chr3_1:73851427-73851446 Msa0374400:intron 60.0%
GGTGTGCAGTCCTCACAAGC+TGG - chr3_1:73851919-73851938 Msa0374400:CDS 60.0%
TGGGTGGCCCAACGGTTGTT+AGG + chr3_1:73851999-73852018 None:intergenic 60.0%
CTCCAGATGTCACGTCCTCC+TGG - chr3_1:73852041-73852060 Msa0374400:intron 60.0%
!! AAAGATGGGCCAGGAGCACC+TGG - chr3_1:73852471-73852490 Msa0374400:intron 60.0%
!! AAGATGGGCCAGGAGCACCT+GGG - chr3_1:73852472-73852491 Msa0374400:intron 60.0%
CGGGCTGAATATGAGGCGGT+TGG - chr3_1:73853572-73853591 Msa0374400:CDS 60.0%
GGTTGGCGGAAGCCCAGATA+AGG - chr3_1:73853589-73853608 Msa0374400:CDS 60.0%
GGAGGGAATCATGCGTGCGG+CGG + chr3_1:73848158-73848177 None:intergenic 65.0%
GGCGGAGGGAATCATGCGTG+CGG + chr3_1:73848161-73848180 None:intergenic 65.0%
!! TGAGACGGTGGCTCTGGTGG+CGG + chr3_1:73848179-73848198 None:intergenic 65.0%
!! GAGTGAGACGGTGGCTCTGG+TGG + chr3_1:73848182-73848201 None:intergenic 65.0%
! ACCTCTGATCGAAGGCGCGC+TGG - chr3_1:73849671-73849690 Msa0374400:intron 65.0%
ACCAGCGCGCCTTCGATCAG+AGG + chr3_1:73849675-73849694 None:intergenic 65.0%
GAGGAGTGGCCACAGAGAGG+TGG - chr3_1:73850081-73850100 Msa0374400:intron 65.0%
CGGTCTAGACCAGACCGCAG+TGG - chr3_1:73851117-73851136 Msa0374400:intron 65.0%
CTAGACCAGACCGCAGTGGC+TGG - chr3_1:73851121-73851140 Msa0374400:intron 65.0%
AGACCAGACCGCAGTGGCTG+GGG - chr3_1:73851123-73851142 Msa0374400:intron 65.0%
CAGGTTTGCCCCAGCCACTG+CGG + chr3_1:73851134-73851153 None:intergenic 65.0%
CTCGATCGTGGGTGGCCCAA+CGG + chr3_1:73852007-73852026 None:intergenic 65.0%
CCACCCACGATCGAGCCACT+CGG - chr3_1:73852012-73852031 Msa0374400:intron 65.0%
CACCCACGATCGAGCCACTC+GGG - chr3_1:73852013-73852032 Msa0374400:intron 65.0%
GTCCCGAGTGGCTCGATCGT+GGG + chr3_1:73852018-73852037 None:intergenic 65.0%
TGTCCCGAGTGGCTCGATCG+TGG + chr3_1:73852019-73852038 None:intergenic 65.0%
! CATCTGGAGCGTGTCCCGAG+TGG + chr3_1:73852030-73852049 None:intergenic 65.0%
GCCCAGGAGGACGTGACATC+TGG + chr3_1:73852046-73852065 None:intergenic 65.0%
ATGTCACGTCCTCCTGGGCG+TGG - chr3_1:73852047-73852066 Msa0374400:intron 65.0%
TGTCACGTCCTCCTGGGCGT+GGG - chr3_1:73852048-73852067 Msa0374400:intron 65.0%
!! AGATGGGCCAGGAGCACCTG+GGG - chr3_1:73852473-73852492 Msa0374400:intron 65.0%
GATTGTCCCCCAGGTGCTCC+TGG + chr3_1:73852483-73852502 None:intergenic 65.0%
GAGCACCTGGGGGACAATCC+TGG - chr3_1:73852484-73852503 Msa0374400:intron 65.0%
GCAGTCCAGGATTGTCCCCC+AGG + chr3_1:73852492-73852511 None:intergenic 65.0%
GGGAATCATGCGTGCGGCGG+CGG + chr3_1:73848155-73848174 None:intergenic 70.0%
!! ACGGTGGCTCTGGTGGCGGA+GGG + chr3_1:73848175-73848194 None:intergenic 70.0%
TGCTGGCCCCCCTTCACCTG+CGG - chr3_1:73850922-73850941 Msa0374400:CDS 70.0%
CTGGTGCGCACACACTGGGG+CGG - chr3_1:73851097-73851116 Msa0374400:CDS 70.0%
TTGCCCCAGCCACTGCGGTC+TGG + chr3_1:73851129-73851148 None:intergenic 70.0%
CCGAGTGGCTCGATCGTGGG+TGG + chr3_1:73852015-73852034 None:intergenic 70.0%
GTCACGTCCTCCTGGGCGTG+GGG - chr3_1:73852049-73852068 Msa0374400:intron 70.0%
CACACTTCCCCACGCCCAGG+AGG + chr3_1:73852059-73852078 None:intergenic 70.0%
CTGCACACTTCCCCACGCCC+AGG + chr3_1:73852062-73852081 None:intergenic 70.0%
!! GATGGGCCAGGAGCACCTGG+GGG - chr3_1:73852474-73852493 Msa0374400:intron 70.0%
!! GACGGTGGCTCTGGTGGCGG+AGG + chr3_1:73848176-73848195 None:intergenic 75.0%
! CATGCGTGCGGCGGCGGCGC+CGG + chr3_1:73848149-73848168 None:intergenic 85.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 73847723 73854322 73847723 ID=Msa0374400;Name=Msa0374400
chr3_1 mRNA 73847723 73854322 73847723 ID=Msa0374400-mRNA-1;Parent=Msa0374400;Name=Msa0374400-mRNA-1;_AED=0.08;_eAED=0.09;_QI=362|0.83|0.92|1|0.83|0.92|13|631|443
chr3_1 exon 73847723 73848506 73847723 ID=Msa0374400-mRNA-1:exon:16877;Parent=Msa0374400-mRNA-1
chr3_1 exon 73848811 73848882 73848811 ID=Msa0374400-mRNA-1:exon:16876;Parent=Msa0374400-mRNA-1
chr3_1 exon 73849090 73849194 73849090 ID=Msa0374400-mRNA-1:exon:16875;Parent=Msa0374400-mRNA-1
chr3_1 exon 73849287 73849363 73849287 ID=Msa0374400-mRNA-1:exon:16874;Parent=Msa0374400-mRNA-1
chr3_1 exon 73849410 73849434 73849410 ID=Msa0374400-mRNA-1:exon:16873;Parent=Msa0374400-mRNA-1
chr3_1 exon 73849500 73849574 73849500 ID=Msa0374400-mRNA-1:exon:16872;Parent=Msa0374400-mRNA-1
chr3_1 exon 73850878 73850964 73850878 ID=Msa0374400-mRNA-1:exon:16871;Parent=Msa0374400-mRNA-1
chr3_1 exon 73851057 73851124 73851057 ID=Msa0374400-mRNA-1:exon:16870;Parent=Msa0374400-mRNA-1
chr3_1 exon 73851539 73851626 73851539 ID=Msa0374400-mRNA-1:exon:16869;Parent=Msa0374400-mRNA-1
chr3_1 exon 73851715 73851815 73851715 ID=Msa0374400-mRNA-1:exon:16868;Parent=Msa0374400-mRNA-1
chr3_1 exon 73851889 73852009 73851889 ID=Msa0374400-mRNA-1:exon:16867;Parent=Msa0374400-mRNA-1
chr3_1 exon 73853503 73853634 73853503 ID=Msa0374400-mRNA-1:exon:16866;Parent=Msa0374400-mRNA-1
chr3_1 exon 73853733 73854322 73853733 ID=Msa0374400-mRNA-1:exon:16865;Parent=Msa0374400-mRNA-1
chr3_1 five_prime_UTR 73853961 73854322 73853961 ID=Msa0374400-mRNA-1:five_prime_utr;Parent=Msa0374400-mRNA-1
chr3_1 CDS 73853733 73853960 73853733 ID=Msa0374400-mRNA-1:cds;Parent=Msa0374400-mRNA-1
chr3_1 CDS 73853503 73853634 73853503 ID=Msa0374400-mRNA-1:cds;Parent=Msa0374400-mRNA-1
chr3_1 CDS 73851889 73852009 73851889 ID=Msa0374400-mRNA-1:cds;Parent=Msa0374400-mRNA-1
chr3_1 CDS 73851715 73851815 73851715 ID=Msa0374400-mRNA-1:cds;Parent=Msa0374400-mRNA-1
chr3_1 CDS 73851539 73851626 73851539 ID=Msa0374400-mRNA-1:cds;Parent=Msa0374400-mRNA-1
chr3_1 CDS 73851057 73851124 73851057 ID=Msa0374400-mRNA-1:cds;Parent=Msa0374400-mRNA-1
chr3_1 CDS 73850878 73850964 73850878 ID=Msa0374400-mRNA-1:cds;Parent=Msa0374400-mRNA-1
chr3_1 CDS 73849500 73849574 73849500 ID=Msa0374400-mRNA-1:cds;Parent=Msa0374400-mRNA-1
chr3_1 CDS 73849410 73849434 73849410 ID=Msa0374400-mRNA-1:cds;Parent=Msa0374400-mRNA-1
chr3_1 CDS 73849287 73849363 73849287 ID=Msa0374400-mRNA-1:cds;Parent=Msa0374400-mRNA-1
chr3_1 CDS 73849090 73849194 73849090 ID=Msa0374400-mRNA-1:cds;Parent=Msa0374400-mRNA-1
chr3_1 CDS 73848811 73848882 73848811 ID=Msa0374400-mRNA-1:cds;Parent=Msa0374400-mRNA-1
chr3_1 CDS 73848354 73848506 73848354 ID=Msa0374400-mRNA-1:cds;Parent=Msa0374400-mRNA-1
chr3_1 three_prime_UTR 73847723 73848353 73847723 ID=Msa0374400-mRNA-1:three_prime_utr;Parent=Msa0374400-mRNA-1
Gene Sequence

>Msa0374400

ATGGCAGAGCGTGTGTTACTCACTCCTTCACTCTCTTCACCAACCACAATGGCTACAATCACCGGCGCCGCCGCCGCACGCATGATTCCCTCCGCCACCAGAGCCACCGTCTCACTCTCAACCTCCCGTTCGTTCTTCTCATTTTCATCGTCATCTTCTTCCAGTTCCGTTTCCTCGCTCAATTGCTTGCGTTCTTCTCCTCGCATTTCTCACATCTTTCTCAATCAGCGAAGAGGAGAAGTTCGTGCTTCGAGGGGACGATTCGGAACGGTTGCGTTTGCGTCTGATCCTGATCAGTTGAAAAGCGCTAGAGAAGATATCAAGGAGCTTCTTAAGACTAAGTTCTGTCATCCTCTTTTGATTCGTTTGGGATGGCATGATGCTGGTACCTATAATAAGAATATTGAGGAGTGGCCACAGAGAGGTGGAGCCAATGGTAGCTTAAGATTTGAAGTTGAGTTGAAACATGGAGCCAATGCTGGCCTTGTAAATGCATTGAAACTTCTCCAGCCAATCAAAGACAAATATTCAGGCGTGACATATGCAGACTTATTTCAGTTAGCTAGTGCTACAGCTGTGGAGGAAGCTGGAGGCCCAAAAATTCCCATGAAATATGGAAGAGTAGACGTCACTGGACCTGAACAATGCCCTGAAGAAGGGAGACTTCCTGATGCTGGCCCCCCTTCACCTGCGGATCATTTGCGTCAAGTTTTCTACCGAATGGGGTTGAATGACAAGGAAATTGTTGCATTATCTGGTGCGCACACACTGGGGCGGTCTAGACCAGACCGCAGTGGCTGGGGCAAACCTGAGACTAAATACACGAAAGATGGGCCAGGAGCACCTGGGGGACAATCCTGGACTGCACAATGGTTAAAGTTTGACAACTCTTACTTCAAGTATAGGAAGGGAAGAGGAGAGGATAGACATCAAAGAAAAAAGGATGAAGATCTATTGGTATTGCCAACTGATGCTGCTCTTTTTGACGATCCTTCCTTCAAGGTATATGCTGAGAAATATGCTGTAGATCAGGAAGCATTCTTTAAAGATTATGCTGAAGCACATGCCAAACTCAGCAACCTTGGAGCAAAGTTTGAACCTGCAGAGGGCATTGTGGTAGATGGTTCTCCAAATGTAGTGGGAGAGAAGTTTGTAGCAGCCAATTACTCCTCTGGAAAGAAAGAGCTGTCTGATGCTATGAGGAAGAAGATACGGGCTGAATATGAGGCGGTTGGCGGAAGCCCAGATAAGGCTCTAAAGTCAAACTATTTCCTAAACATCATAATTGTTATTGCTGCTTTGGCTATTTTGACATATCTGTTTGGAAACTAA
Protein sequence

>Msa0374400

MAERVLLTPSLSSPTTMATITGAAAARMIPSATRATVSLSTSRSFFSFSSSSSSSSVSSLNCLRSSPRISHIFLNQRRGEVRASRGRFGTVAFASDPDQLKSAREDIKELLKTKFCHPLLIRLGWHDAGTYNKNIEEWPQRGGANGSLRFEVELKHGANAGLVNALKLLQPIKDKYSGVTYADLFQLASATAVEEAGGPKIPMKYGRVDVTGPEQCPEEGRLPDAGPPSPADHLRQVFYRMGLNDKEIVALSGAHTLGRSRPDRSGWGKPETKYTKDGPGAPGGQSWTAQWLKFDNSYFKYRKGRGEDRHQRKKDEDLLVLPTDAALFDDPSFKVYAEKYAVDQEAFFKDYAEAHAKLSNLGAKFEPAEGIVVDGSPNVVGEKFVAANYSSGKKELSDAMRKKIRAEYEAVGGSPDKALKSNYFLNIIIVIAALAILTYLFGN*