AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0156260


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0156260 MtrunA17_Chr1g0167421 97.122 417 8 1 1 413 1 417 0.0 835
Msa0156260 MtrunA17_Chr8g0380261 46.328 354 172 10 66 410 48 392 3.67e-97 296
Msa0156260 MtrunA17_Chr4g0005881 88.679 53 6 0 178 230 21 73 3.81e-30 111
Msa0156260 MtrunA17_Chr7g0274061 30.091 329 187 12 62 385 16 306 3.77e-27 110
Msa0156260 MtrunA17_Chr1g0169691 28.099 363 202 12 57 405 1 318 1.90e-26 108
Msa0156260 MtrunA17_Chr7g0274071 28.060 335 180 13 62 385 18 302 8.15e-25 104
Msa0156260 MtrunA17_Chr7g0222171 27.714 350 199 14 61 403 8 310 8.53e-23 98.6
Msa0156260 MtrunA17_Chr7g0274041 27.193 342 179 11 61 385 11 299 8.84e-23 98.6
Msa0156260 MtrunA17_Chr7g0221791 26.891 357 202 15 61 408 8 314 3.89e-21 93.6
Msa0156260 MtrunA17_Chr1g0204651 26.284 331 196 13 61 385 9 297 5.82e-19 87.4
Msa0156260 MtrunA17_Chr3g0095421 24.324 333 199 10 61 380 39 331 2.93e-18 85.9
Msa0156260 MtrunA17_Chr3g0127491 25.965 285 152 10 48 305 10 262 6.33e-18 84.7
Msa0156260 MtrunA17_Chr7g0222121 26.110 383 196 14 61 403 8 343 7.30e-18 84.7
Msa0156260 MtrunA17_Chr7g0274081 30.220 182 112 7 223 404 2 168 3.46e-12 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0156260 AT1G04420.1 75.521 384 91 1 33 413 29 412 0.0 620
Msa0156260 AT1G04690.1 28.895 353 212 10 57 405 1 318 5.57e-29 115
Msa0156260 AT1G60690.1 28.857 350 195 13 61 403 11 313 3.58e-23 100
Msa0156260 AT1G60710.1 28.940 349 196 14 61 403 11 313 5.03e-23 99.8
Msa0156260 AT1G60680.1 27.515 338 195 11 61 391 11 305 1.89e-22 98.2
Msa0156260 AT1G10810.1 27.195 353 197 14 61 403 11 313 1.33e-20 92.8
Msa0156260 AT1G60750.1 28.000 350 182 13 61 403 12 298 3.06e-20 91.3
Msa0156260 AT1G60730.1 27.143 350 201 13 61 403 11 313 1.08e-19 90.1
Msa0156260 AT1G60730.3 27.195 353 217 13 61 403 11 333 2.74e-19 89.0
Msa0156260 AT5G53580.1 26.074 349 189 15 56 385 36 334 9.07e-18 84.7
Msa0156260 AT1G10810.2 28.854 253 135 10 61 307 11 224 1.03e-16 79.7
Msa0156260 AT1G60680.2 27.935 247 136 9 61 303 11 219 1.35e-15 76.6
Msa0156260 AT1G10810.3 27.046 281 156 11 129 403 24 261 2.74e-15 76.3
Msa0156260 AT4G33670.1 24.791 359 211 13 57 409 4 309 1.83e-12 68.2

Find 105 sgRNAs with CRISPR-Local

Find 271 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTCCGATTTCTTTCAAATT+TGG 0.092204 1_4:+22107285 Msa0156260:three_prime_UTR
AAGCCAATGTTGCAATTATT+TGG 0.195179 1_4:-22106402 None:intergenic
CCTTGTGTCTCTTTCTTCAT+TGG 0.197248 1_4:-22104162 None:intergenic
TTCAAAGGTATAGTGTTTAA+AGG 0.235324 1_4:-22107037 None:intergenic
GGTCAGAGTCACCAAGTTTC+CGG 0.264198 1_4:-22102685 None:intergenic
CGTTATGCGGCCGTACAAAC+TGG 0.271337 1_4:+22107132 Msa0156260:three_prime_UTR
CAAGCAAGCTATAGCTGTTC+TGG 0.272185 1_4:-22105388 None:intergenic
TTCCGATTTCTTTCAAATTT+GGG 0.272501 1_4:+22107286 Msa0156260:three_prime_UTR
TTCTGGATACTGACAATCTT+TGG 0.280723 1_4:-22105371 None:intergenic
GTCTCTTTCTTCATTGGAAT+CGG 0.294986 1_4:-22104156 None:intergenic
ATTCTTATGATCCTTCAAAA+TGG 0.302870 1_4:+22104837 Msa0156260:CDS
GATCGCTACGTTGCATTGTT+TGG 0.310293 1_4:+22104809 Msa0156260:CDS
GAGTGATTTCACTGATATTA+AGG 0.318627 1_4:-22102706 None:intergenic
CAATGTTTCAGATGACGTTT+GGG 0.330727 1_4:+22103739 Msa0156260:intron
TTCCCAAATTTGAAAGAAAT+CGG 0.337603 1_4:-22107288 None:intergenic
AGGAGTTAGACCATGTTTCT+TGG 0.357872 1_4:-22106832 None:intergenic
TATGTACCCGTGAAATTGAT+TGG 0.374448 1_4:-22106542 None:intergenic
AATCCAAGCGCGAGCTGAAC+AGG 0.376331 1_4:-22106852 None:intergenic
TTGTCATAACAAGTTAGTTT+TGG 0.387662 1_4:-22102358 None:intergenic
TGTGAGAGATCGTCCATTCA+TGG 0.397619 1_4:+22106875 Msa0156260:CDS
CTCAATTATGCATTTGAGAA+TGG 0.398022 1_4:+22103795 Msa0156260:CDS
GCAATGTTTCAGATGACGTT+TGG 0.398844 1_4:+22103738 Msa0156260:intron
TTTCAAGAACTTATCAATGA+AGG 0.411788 1_4:+22104896 Msa0156260:CDS
TTGCAACAAATCAATATAAT+CGG 0.421198 1_4:-22104530 None:intergenic
ATAATTGAACTCGCCATGAA+TGG 0.430321 1_4:-22106888 None:intergenic
TTGATTTGTTGCAAATTCAT+TGG 0.436665 1_4:+22104539 Msa0156260:CDS
CCATTGCAGTACCGGAAACT+TGG 0.436754 1_4:+22102674 Msa0156260:CDS
CATCCAAATAATTGCAACAT+TGG 0.438753 1_4:+22106399 Msa0156260:CDS
ACTCCTGTTCAGCTCGCGCT+TGG 0.440067 1_4:+22106849 Msa0156260:CDS
AGAGTGTTCCGCCGCCTAGT+GGG 0.440878 1_4:-22106437 None:intergenic
TTCATGGCGAGTTCAATTAT+CGG 0.446341 1_4:+22106891 Msa0156260:CDS
TCTCTTTCTTCATTGGAATC+GGG 0.450697 1_4:-22104155 None:intergenic
ATCATAGCAACAAAAGTTTG+CGG 0.453007 1_4:+22104403 Msa0156260:CDS
AGAAAAGCCTTAAGCGTCTT+GGG 0.457823 1_4:+22104506 Msa0156260:CDS
ATTCCTGTCATGACTTCTGC+TGG 0.463780 1_4:-22106978 None:intergenic
GTTTCAAATGAGACTTCATA+TGG 0.472814 1_4:+22105308 Msa0156260:CDS
GAGAGTGTTCCGCCGCCTAG+TGG 0.473729 1_4:-22106438 None:intergenic
AACAATGCAACGTAGCGATC+TGG 0.476923 1_4:-22104806 None:intergenic
CAATGTTGCAATTATTTGGA+TGG 0.477814 1_4:-22106398 None:intergenic
CTAGGCGGCGGAACACTCTC+AGG 0.478621 1_4:+22106441 Msa0156260:CDS
AATCGGTCCCAAGACGCTTA+AGG 0.480357 1_4:-22104513 None:intergenic
TTATATCTTTCCATGTAGCC+AGG 0.480910 1_4:-22106519 None:intergenic
TCAACAATCCATTGCAGTAC+CGG 0.485809 1_4:+22102666 Msa0156260:CDS
GATATAACCAATCAATTTCA+CGG 0.486738 1_4:+22106535 Msa0156260:CDS
GAATCTCTTCCCTGGCTACA+TGG 0.491377 1_4:+22106509 Msa0156260:CDS
GAGAAAAGCCTTAAGCGTCT+TGG 0.499990 1_4:+22104505 Msa0156260:CDS
AATATCAGTGAAATCACTCT+TGG 0.502115 1_4:+22102710 Msa0156260:CDS
TGTTCAACAAACGGCACACT+AGG 0.508236 1_4:-22104863 None:intergenic
CTGATCTCTACATTGCTAGC+TGG 0.513614 1_4:+22104190 Msa0156260:CDS
TATTCAATACCCAGTTTGTA+CGG 0.515207 1_4:-22107142 None:intergenic
CCAAGTTTCCGGTACTGCAA+TGG 0.518284 1_4:-22102674 None:intergenic
GTCATGACTTCTGCTGGTAA+AGG 0.518717 1_4:-22106972 None:intergenic
TCCGCCGCCTAGTGGGGAAT+AGG 0.518898 1_4:-22106430 None:intergenic
GTCCATGCAGCTAAAGTTGA+GGG 0.519118 1_4:+22105344 Msa0156260:CDS
ATATTCTTATATCAGTTCCA+TGG 0.527633 1_4:+22107069 Msa0156260:three_prime_UTR
AACTATTAAGTATCTTGAGT+TGG 0.528848 1_4:+22106809 Msa0156260:CDS
TATAGTGTTTAAAGGATGCT+AGG 0.529693 1_4:-22107029 None:intergenic
GGTTGATGCGGCAAATATCA+AGG 0.530779 1_4:+22104474 Msa0156260:CDS
AGTTACTTACGCGACAATGC+AGG 0.532771 1_4:+22104442 Msa0156260:CDS
GTTATGCGGCCGTACAAACT+GGG 0.534500 1_4:+22107133 Msa0156260:three_prime_UTR
GCTTGCAACTGTTCAACAAA+CGG 0.537666 1_4:-22104872 None:intergenic
CTAACTTGTTATGACAAAAG+AGG 0.539684 1_4:+22102364 Msa0156260:five_prime_UTR
GTACTGCAATGGATTGTTGA+TGG 0.539963 1_4:-22102663 None:intergenic
GTCCCTCAACTTTAGCTGCA+TGG 0.544863 1_4:-22105346 None:intergenic
TCCTATTCCCCACTAGGCGG+CGG 0.552022 1_4:+22106429 Msa0156260:CDS
AGCTGCTAAGAAGCCATGGC+CGG 0.553641 1_4:+22102494 Msa0156260:exon
ATTCAATATGTATCTATCCA+TGG 0.559972 1_4:-22107086 None:intergenic
AGAACTTATCAATGAAGGAA+AGG 0.566138 1_4:+22104901 Msa0156260:CDS
TTGCTATCCTATTCCCCACT+AGG 0.566323 1_4:+22106423 Msa0156260:CDS
CTTGAGTTGGCCAAGAAACA+TGG 0.566480 1_4:+22106822 Msa0156260:CDS
GAAGAAGATGCTTTCTGAGG+AGG 0.568327 1_4:+22102609 Msa0156260:CDS
ATGCATCAGGTACGTTACAT+AGG 0.569919 1_4:+22105284 Msa0156260:intron
TGGTGTGAGAGAATGAGAAA+TGG 0.573879 1_4:-22102546 None:intergenic
TGAGACTTCATATGGAGTGA+TGG 0.573984 1_4:+22105316 Msa0156260:CDS
CGTCCATGCAGCTAAAGTTG+AGG 0.578730 1_4:+22105343 Msa0156260:CDS
GGAAGATTGAATCTCTTCCC+TGG 0.579473 1_4:+22106501 Msa0156260:CDS
GAGTGTTCCGCCGCCTAGTG+GGG 0.583136 1_4:-22106436 None:intergenic
ATATAACCAATCAATTTCAC+GGG 0.584104 1_4:+22106536 Msa0156260:CDS
TATATCTTTCCATGTAGCCA+GGG 0.587281 1_4:-22106518 None:intergenic
GAAAGAGCAGACACCGGCCA+TGG 0.588039 1_4:-22102507 None:intergenic
CTTATGATCCTTCAAAATGG+AGG 0.594759 1_4:+22104840 Msa0156260:CDS
GATGTGCACGAGTGTGGTGT+TGG 0.599619 1_4:+22102394 Msa0156260:five_prime_UTR
AATTATCGGTGCAACATCTG+TGG 0.606607 1_4:+22106905 Msa0156260:CDS
GATAAGCTGCTAAGAAGCCA+TGG 0.609538 1_4:+22102490 Msa0156260:exon
TTACCAGCAGAAGTCATGAC+AGG 0.613222 1_4:+22106975 Msa0156260:CDS
GTAGAAGAAGATGCTTTCTG+AGG 0.613259 1_4:+22102606 Msa0156260:CDS
AAGTTTGCGGTTATTCTGAG+AGG 0.622868 1_4:+22104416 Msa0156260:CDS
GACGTTTGGGGAGCAAAACA+CGG 0.625843 1_4:+22103752 Msa0156260:CDS
GGCAAATATCAAGGAAAGTG+TGG 0.646225 1_4:+22104483 Msa0156260:CDS
AGAAATGGCAACAACGTCGG+AGG 0.648860 1_4:-22102531 None:intergenic
TTGATGGCGGCACAAACAAG+AGG 0.649025 1_4:-22102647 None:intergenic
GAAATCTCAATCTCGTGACA+AGG 0.665936 1_4:+22104215 Msa0156260:CDS
ATGAGAAATGGCAACAACGT+CGG 0.668018 1_4:-22102534 None:intergenic
GGAGGAGAAAGAGCAGACAC+CGG 0.670007 1_4:-22102513 None:intergenic
CATTGACAATAACTCAACAT+CGG 0.679051 1_4:-22107166 None:intergenic
CCAATGAAGAAAGAGACACA+AGG 0.681685 1_4:+22104162 Msa0156260:CDS
AACAACGTGTTTGTATTGTG+TGG 0.687492 1_4:+22102459 Msa0156260:five_prime_UTR
TAATGCTCTTGATACTGCTG+AGG 0.693085 1_4:+22103821 Msa0156260:CDS
TGAGGAGGACGAGAACTGTG+AGG 0.701626 1_4:+22102624 Msa0156260:CDS
AATGTTTCAGATGACGTTTG+GGG 0.705815 1_4:+22103740 Msa0156260:intron
CTGCAATGGATTGTTGATGG+CGG 0.723159 1_4:-22102660 None:intergenic
GTACTTGCGAAAACGTTATG+CGG 0.725667 1_4:+22107119 Msa0156260:three_prime_UTR
CTGTCTATAACAATAAACAG+AGG 0.736786 1_4:+22102426 Msa0156260:five_prime_UTR
CTATCCTATTCCCCACTAGG+CGG 0.752007 1_4:+22106426 Msa0156260:CDS
GTGTTGTTGAGAGACAGTGA+TGG 0.758761 1_4:-22102566 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CAAATTTTCAAAAAAATAAA+AGG + chr1_4:22103349-22103368 Msa0156260:intron 10.0%
!!! TATTTTATTTGTTACTTTAT+TGG + chr1_4:22104599-22104618 Msa0156260:intron 10.0%
!!! TATTTTGGTTTTTATAAAAA+TGG - chr1_4:22106599-22106618 None:intergenic 10.0%
!!! AATTTTCATTTTTTAATGTT+CGG + chr1_4:22106774-22106793 Msa0156260:intron 10.0%
!! AAACAAAAAAGAATAATAAG+AGG - chr1_4:22102773-22102792 None:intergenic 15.0%
!! AAGTTAATGTAAAAATTAGA+AGG + chr1_4:22103450-22103469 Msa0156260:intron 15.0%
!! TAAAAAATAAATGAAGAGAA+TGG - chr1_4:22103545-22103564 None:intergenic 15.0%
!!! TTTATTTAAAGTTGTTATTG+AGG + chr1_4:22103561-22103580 Msa0156260:intron 15.0%
!!! TTATTTAAAGTTGTTATTGA+GGG + chr1_4:22103562-22103581 Msa0156260:intron 15.0%
!!! CCTATACATTTTTATATAAA+AGG - chr1_4:22103625-22103644 None:intergenic 15.0%
!!! CCTTTTATATAAAAATGTAT+AGG + chr1_4:22103622-22103641 Msa0156260:intron 15.0%
!! TATAAAAATGTATAGGTTAT+TGG + chr1_4:22103629-22103648 Msa0156260:intron 15.0%
!! TAAAATTCAAGTATTTGAAT+TGG + chr1_4:22103918-22103937 Msa0156260:intron 15.0%
!!! AATGTGATTTTTATTGTATT+AGG + chr1_4:22104685-22104704 Msa0156260:intron 15.0%
!!! ATGTAATACTTTTAAAACTT+GGG - chr1_4:22105585-22105604 None:intergenic 15.0%
!!! AATGTAATACTTTTAAAACT+TGG - chr1_4:22105586-22105605 None:intergenic 15.0%
!!! TATTTTTGCAAATTTCTTAA+TGG - chr1_4:22106087-22106106 None:intergenic 15.0%
!! AAAAAATGAAAATTCTTGAT+TGG - chr1_4:22106768-22106787 None:intergenic 15.0%
!! TTGCAACAAATCAATATAAT+CGG - chr1_4:22104533-22104552 None:intergenic 20.0%
!! TAACTATTACTATAGATTGA+AGG - chr1_4:22105079-22105098 None:intergenic 20.0%
!!! TGTAATACTTTTAAAACTTG+GGG - chr1_4:22105584-22105603 None:intergenic 20.0%
!!! TACAAAGTATTGTAAAATAG+CGG + chr1_4:22106176-22106195 Msa0156260:intron 20.0%
!!! AAGTTTGGTTTTTATAACAT+TGG + chr1_4:22106706-22106725 Msa0156260:intron 20.0%
! TATCAACCTTAAAAAAAACC+CGG + chr1_4:22103135-22103154 Msa0156260:intron 25.0%
! TGAACATAAGTTTATAAGTG+CGG - chr1_4:22103380-22103399 None:intergenic 25.0%
! AAACAGACTAATAATCATGA+TGG - chr1_4:22104006-22104025 None:intergenic 25.0%
!! GATTTAGATTTCAGTTGTTT+TGG + chr1_4:22104304-22104323 Msa0156260:intron 25.0%
! TATGATAATCTATGCACAAA+GGG - chr1_4:22104389-22104408 None:intergenic 25.0%
!!! TTGATTTGTTGCAAATTCAT+TGG + chr1_4:22104539-22104558 Msa0156260:CDS 25.0%
!! TTTAAAACTTAAGTCAAGCA+TGG + chr1_4:22104652-22104671 Msa0156260:intron 25.0%
! ATTCTTATGATCCTTCAAAA+TGG + chr1_4:22104837-22104856 Msa0156260:CDS 25.0%
! TTTCAAGAACTTATCAATGA+AGG + chr1_4:22104896-22104915 Msa0156260:CDS 25.0%
! TAGAAAAGATAAAGCATGTT+AGG - chr1_4:22104936-22104955 None:intergenic 25.0%
! ATCAATTAATTCTGTATTGC+TGG + chr1_4:22105473-22105492 Msa0156260:intron 25.0%
! AACACGAATCATATACTATA+AGG - chr1_4:22105523-22105542 None:intergenic 25.0%
!!! TTTTTTATTTTGGACTCTCT+AGG - chr1_4:22105615-22105634 None:intergenic 25.0%
! TAGAGAGTCCAAAATAAAAA+AGG + chr1_4:22105614-22105633 Msa0156260:intron 25.0%
! ACAAATGATTACAGATAACA+TGG + chr1_4:22105716-22105735 Msa0156260:intron 25.0%
! TTGAGTTTCTTTATCTTACA+AGG + chr1_4:22105796-22105815 Msa0156260:intron 25.0%
! TGAGTTTCTTTATCTTACAA+GGG + chr1_4:22105797-22105816 Msa0156260:intron 25.0%
! GATATAACCAATCAATTTCA+CGG + chr1_4:22106535-22106554 Msa0156260:CDS 25.0%
! ATATAACCAATCAATTTCAC+GGG + chr1_4:22106536-22106555 Msa0156260:CDS 25.0%
!!! TTTTTTAATGTTCGGATTTC+AGG + chr1_4:22106782-22106801 Msa0156260:intron 25.0%
! AACTATTAAGTATCTTGAGT+TGG + chr1_4:22106809-22106828 Msa0156260:CDS 25.0%
!! TTCAAAGGTATAGTGTTTAA+AGG - chr1_4:22107040-22107059 None:intergenic 25.0%
!! CACTATACCTTTGAATTTTT+CGG + chr1_4:22107045-22107064 Msa0156260:three_prime_UTR 25.0%
!! ACTATACCTTTGAATTTTTC+GGG + chr1_4:22107046-22107065 Msa0156260:three_prime_UTR 25.0%
! ATATTCTTATATCAGTTCCA+TGG + chr1_4:22107069-22107088 Msa0156260:three_prime_UTR 25.0%
! ATTCAATATGTATCTATCCA+TGG - chr1_4:22107089-22107108 None:intergenic 25.0%
! TTCCGATTTCTTTCAAATTT+GGG + chr1_4:22107286-22107305 Msa0156260:three_prime_UTR 25.0%
! TTCCCAAATTTGAAAGAAAT+CGG - chr1_4:22107291-22107310 None:intergenic 25.0%
!! CTAACTTGTTATGACAAAAG+AGG + chr1_4:22102364-22102383 Msa0156260:five_prime_UTR 30.0%
CTGTCTATAACAATAAACAG+AGG + chr1_4:22102426-22102445 Msa0156260:five_prime_UTR 30.0%
GAGTGATTTCACTGATATTA+AGG - chr1_4:22102709-22102728 None:intergenic 30.0%
AATATCAGTGAAATCACTCT+TGG + chr1_4:22102710-22102729 Msa0156260:CDS 30.0%
!!! ACTTTCAAGTCACTTTTACT+CGG - chr1_4:22102911-22102930 None:intergenic 30.0%
AAAGTGACTTGAAAGTAAAG+TGG + chr1_4:22102915-22102934 Msa0156260:intron 30.0%
! AAAGTAAAGTGGTTTGTGTT+TGG + chr1_4:22102926-22102945 Msa0156260:intron 30.0%
! AAGTAAAGTGGTTTGTGTTT+GGG + chr1_4:22102927-22102946 Msa0156260:intron 30.0%
!! AGTTTTGCTTTGACTTCAAT+TGG + chr1_4:22103270-22103289 Msa0156260:intron 30.0%
GCACTTATAAACTTATGTTC+AGG + chr1_4:22103379-22103398 Msa0156260:intron 30.0%
CTCAATTATGCATTTGAGAA+TGG + chr1_4:22103795-22103814 Msa0156260:CDS 30.0%
! TAAATCTCAATCTAGCTTCA+GGG - chr1_4:22104290-22104309 None:intergenic 30.0%
ATGATAATCTATGCACAAAG+GGG - chr1_4:22104388-22104407 None:intergenic 30.0%
CTATGATAATCTATGCACAA+AGG - chr1_4:22104390-22104409 None:intergenic 30.0%
ATCATAGCAACAAAAGTTTG+CGG + chr1_4:22104403-22104422 Msa0156260:CDS 30.0%
! GTGATTTTCTGCTTCATTAT+AGG + chr1_4:22104783-22104802 Msa0156260:intron 30.0%
AGAACTTATCAATGAAGGAA+AGG + chr1_4:22104901-22104920 Msa0156260:CDS 30.0%
AGATAAAGCATGTTAGGAAT+AGG - chr1_4:22104930-22104949 None:intergenic 30.0%
!! TTTGTATTTTTGCATGCATC+AGG + chr1_4:22105271-22105290 Msa0156260:intron 30.0%
GTTTCAAATGAGACTTCATA+TGG + chr1_4:22105308-22105327 Msa0156260:CDS 30.0%
TCATATACTATAAGGACAAC+AGG - chr1_4:22105515-22105534 None:intergenic 30.0%
!!! CAGGAAAGCCTTTTTTATTT+TGG - chr1_4:22105625-22105644 None:intergenic 30.0%
GATTACAGATAACATGGTTT+AGG + chr1_4:22105722-22105741 Msa0156260:intron 30.0%
TCTCACAATCAGCAATTTAT+AGG + chr1_4:22105821-22105840 Msa0156260:intron 30.0%
TCCAATTTATCCTTCAAACT+TGG + chr1_4:22105883-22105902 Msa0156260:intron 30.0%
CCAATTTATCCTTCAAACTT+GGG + chr1_4:22105884-22105903 Msa0156260:intron 30.0%
TAGTCAAACACAGAAAATAG+CGG - chr1_4:22106247-22106266 None:intergenic 30.0%
CACTTTACACCTCTAATTAA+GGG - chr1_4:22106302-22106321 None:intergenic 30.0%
ACACTTTACACCTCTAATTA+AGG - chr1_4:22106303-22106322 None:intergenic 30.0%
ACACGAAGAAGCTTAAAATA+AGG - chr1_4:22106333-22106352 None:intergenic 30.0%
CAATGTTGCAATTATTTGGA+TGG - chr1_4:22106401-22106420 None:intergenic 30.0%
CATCCAAATAATTGCAACAT+TGG + chr1_4:22106399-22106418 Msa0156260:CDS 30.0%
AAGCCAATGTTGCAATTATT+TGG - chr1_4:22106405-22106424 None:intergenic 30.0%
!! AATTCTAAAGCTGCAAAAAG+TGG + chr1_4:22106480-22106499 Msa0156260:CDS 30.0%
AAAAACCAAACTTAACTAGC+TGG - chr1_4:22106699-22106718 None:intergenic 30.0%
TTAGACTATACTCTAAACCA+TGG + chr1_4:22106730-22106749 Msa0156260:intron 30.0%
ATTGGTTATCTTGTTAACCA+TGG - chr1_4:22106750-22106769 None:intergenic 30.0%
! ATGCTTTTACAACAACTGAA+CGG + chr1_4:22106949-22106968 Msa0156260:CDS 30.0%
TATAGTGTTTAAAGGATGCT+AGG - chr1_4:22107032-22107051 None:intergenic 30.0%
GAATATCCCGAAAAATTCAA+AGG - chr1_4:22107055-22107074 None:intergenic 30.0%
TATTCAATACCCAGTTTGTA+CGG - chr1_4:22107145-22107164 None:intergenic 30.0%
CATTGACAATAACTCAACAT+CGG - chr1_4:22107169-22107188 None:intergenic 30.0%
GTTCCGATTTCTTTCAAATT+TGG + chr1_4:22107285-22107304 Msa0156260:three_prime_UTR 30.0%
AACAACGTGTTTGTATTGTG+TGG + chr1_4:22102459-22102478 Msa0156260:five_prime_UTR 35.0%
!! TTCATGCATGTTTTGTTCTG+CGG + chr1_4:22102855-22102874 Msa0156260:intron 35.0%
!!! TGCACCTTTGGAATCAATTT+TGG + chr1_4:22103085-22103104 Msa0156260:intron 35.0%
!! TGTTTTGTTCCACTTCTAGA+GGG - chr1_4:22103112-22103131 None:intergenic 35.0%
!! ATGTTTTGTTCCACTTCTAG+AGG - chr1_4:22103113-22103132 None:intergenic 35.0%
TCACCAAACACAGAAATTGT+TGG - chr1_4:22103240-22103259 None:intergenic 35.0%
CAATCCAAGAACCAACTAAT+CGG - chr1_4:22103324-22103343 None:intergenic 35.0%
AGGTCAATCTCATTCAATGT+GGG + chr1_4:22103399-22103418 Msa0156260:intron 35.0%
CAATGTTTCAGATGACGTTT+GGG + chr1_4:22103739-22103758 Msa0156260:intron 35.0%
AATGTTTCAGATGACGTTTG+GGG + chr1_4:22103740-22103759 Msa0156260:intron 35.0%
GTGAAAATGAGATGGAATGA+AGG - chr1_4:22103878-22103897 None:intergenic 35.0%
GTACAAGTGTGAAAATGAGA+TGG - chr1_4:22103886-22103905 None:intergenic 35.0%
TCTCTTTCTTCATTGGAATC+GGG - chr1_4:22104158-22104177 None:intergenic 35.0%
GTCTCTTTCTTCATTGGAAT+CGG - chr1_4:22104159-22104178 None:intergenic 35.0%
! TGACAAGGTATTAGTTGTTC+AGG + chr1_4:22104230-22104249 Msa0156260:intron 35.0%
! CTAAATCTCAATCTAGCTTC+AGG - chr1_4:22104291-22104310 None:intergenic 35.0%
TGATAATCTATGCACAAAGG+GGG - chr1_4:22104387-22104406 None:intergenic 35.0%
! AGAAATAGTGATGATGAACC+AGG + chr1_4:22104719-22104738 Msa0156260:intron 35.0%
GTTCAAAAACAAGTTTAGCC+TGG - chr1_4:22104740-22104759 None:intergenic 35.0%
CTTATGATCCTTCAAAATGG+AGG + chr1_4:22104840-22104859 Msa0156260:CDS 35.0%
! AGCAAATACAAAGTACTCCT+CGG - chr1_4:22105007-22105026 None:intergenic 35.0%
TCACAGACTTATGAATCACA+AGG - chr1_4:22105170-22105189 None:intergenic 35.0%
AGTTTATGCTAATTGACGTG+TGG - chr1_4:22105214-22105233 None:intergenic 35.0%
TCACATACACATGTACAAGA+AGG - chr1_4:22105242-22105261 None:intergenic 35.0%
TTCTGGATACTGACAATCTT+TGG - chr1_4:22105374-22105393 None:intergenic 35.0%
!! CTTGTAAGAAGTCGTTTTGA+AGG + chr1_4:22105407-22105426 Msa0156260:CDS 35.0%
CCAAGTATTCAAAGATCTAC+AGG - chr1_4:22105644-22105663 None:intergenic 35.0%
CCTGTAGATCTTTGAATACT+TGG + chr1_4:22105641-22105660 Msa0156260:intron 35.0%
!!! TTTAGGATTTTAGTTGCCAG+AGG + chr1_4:22105739-22105758 Msa0156260:intron 35.0%
CCCAAGTTTGAAGGATAAAT+TGG - chr1_4:22105887-22105906 None:intergenic 35.0%
GAATATGATCCCAAGTTTGA+AGG - chr1_4:22105896-22105915 None:intergenic 35.0%
! TGCGCAAACTTTTAGTGTAT+TGG + chr1_4:22105946-22105965 Msa0156260:intron 35.0%
AGTTCAATTCGACAACACTA+CGG - chr1_4:22106222-22106241 None:intergenic 35.0%
TATATCTTTCCATGTAGCCA+GGG - chr1_4:22106521-22106540 None:intergenic 35.0%
TTATATCTTTCCATGTAGCC+AGG - chr1_4:22106522-22106541 None:intergenic 35.0%
TATGTACCCGTGAAATTGAT+TGG - chr1_4:22106545-22106564 None:intergenic 35.0%
! TGCTGGTACAATGTCTATTT+TGG - chr1_4:22106614-22106633 None:intergenic 35.0%
ATAATTGAACTCGCCATGAA+TGG - chr1_4:22106891-22106910 None:intergenic 35.0%
TTCATGGCGAGTTCAATTAT+CGG + chr1_4:22106891-22106910 Msa0156260:CDS 35.0%
! CATCGATGTCTTCTTTTAGT+TGG - chr1_4:22106932-22106951 None:intergenic 35.0%
ATGAGAAATGGCAACAACGT+CGG - chr1_4:22102537-22102556 None:intergenic 40.0%
TGGTGTGAGAGAATGAGAAA+TGG - chr1_4:22102549-22102568 None:intergenic 40.0%
GTAGAAGAAGATGCTTTCTG+AGG + chr1_4:22102606-22102625 Msa0156260:CDS 40.0%
!! GTACTGCAATGGATTGTTGA+TGG - chr1_4:22102666-22102685 None:intergenic 40.0%
TCAACAATCCATTGCAGTAC+CGG + chr1_4:22102666-22102685 Msa0156260:CDS 40.0%
CGTAATCAATTCTGCACCTT+TGG + chr1_4:22103073-22103092 Msa0156260:intron 40.0%
!! GTTTTGTTCCACTTCTAGAG+GGG - chr1_4:22103111-22103130 None:intergenic 40.0%
!!! TACAGGCCGGGTTTTTTTTA+AGG - chr1_4:22103144-22103163 None:intergenic 40.0%
CTAAAGAGTAGCATACTCCT+AGG - chr1_4:22103192-22103211 None:intergenic 40.0%
! CTAGGAGTATGCTACTCTTT+AGG + chr1_4:22103190-22103209 Msa0156260:intron 40.0%
GTGCCAACAATTTCTGTGTT+TGG + chr1_4:22103234-22103253 Msa0156260:intron 40.0%
CAGGTCAATCTCATTCAATG+TGG + chr1_4:22103398-22103417 Msa0156260:intron 40.0%
GGTCAATCTCATTCAATGTG+GGG + chr1_4:22103400-22103419 Msa0156260:intron 40.0%
GCAATGTTTCAGATGACGTT+TGG + chr1_4:22103738-22103757 Msa0156260:intron 40.0%
TAATGCTCTTGATACTGCTG+AGG + chr1_4:22103821-22103840 Msa0156260:CDS 40.0%
AGTTGTGTGTAGGGATAACT+TGG - chr1_4:22104055-22104074 None:intergenic 40.0%
GATTGCAAGAGTTGTGTGTA+GGG - chr1_4:22104064-22104083 None:intergenic 40.0%
AGATTGCAAGAGTTGTGTGT+AGG - chr1_4:22104065-22104084 None:intergenic 40.0%
CCTTGTGTCTCTTTCTTCAT+TGG - chr1_4:22104165-22104184 None:intergenic 40.0%
CCAATGAAGAAAGAGACACA+AGG + chr1_4:22104162-22104181 Msa0156260:CDS 40.0%
GAAATCTCAATCTCGTGACA+AGG + chr1_4:22104215-22104234 Msa0156260:CDS 40.0%
AAGTTTGCGGTTATTCTGAG+AGG + chr1_4:22104416-22104435 Msa0156260:CDS 40.0%
GGCAAATATCAAGGAAAGTG+TGG + chr1_4:22104483-22104502 Msa0156260:CDS 40.0%
AGAAAAGCCTTAAGCGTCTT+GGG + chr1_4:22104506-22104525 Msa0156260:CDS 40.0%
GCTTGCAACTGTTCAACAAA+CGG - chr1_4:22104875-22104894 None:intergenic 40.0%
ATGCATCAGGTACGTTACAT+AGG + chr1_4:22105284-22105303 Msa0156260:intron 40.0%
TGAGACTTCATATGGAGTGA+TGG + chr1_4:22105316-22105335 Msa0156260:CDS 40.0%
! AGTACAGTTCTTTTCTGACG+TGG + chr1_4:22105432-22105451 Msa0156260:intron 40.0%
TTGAAGGTGGCAAGAGAAAT+AGG + chr1_4:22105769-22105788 Msa0156260:intron 40.0%
!! GCATACATTCTCCTGCTTTT+GGG + chr1_4:22105843-22105862 Msa0156260:intron 40.0%
!! CATACATTCTCCTGCTTTTG+GGG + chr1_4:22105844-22105863 Msa0156260:intron 40.0%
GCTAAAAATTCCCCAAAAGC+AGG - chr1_4:22105857-22105876 None:intergenic 40.0%
TAAAAGTTTGCGCATCACGT+TGG - chr1_4:22105940-22105959 None:intergenic 40.0%
ATTTACCCCACTCCAAGTTA+GGG - chr1_4:22106054-22106073 None:intergenic 40.0%
AATTTACCCCACTCCAAGTT+AGG - chr1_4:22106055-22106074 None:intergenic 40.0%
TTGTAAAATAGCGGCTGTAG+TGG + chr1_4:22106185-22106204 Msa0156260:intron 40.0%
TGTAAAATAGCGGCTGTAGT+GGG + chr1_4:22106186-22106205 Msa0156260:intron 40.0%
ACACCTCTAATTAAGGGTCA+TGG - chr1_4:22106296-22106315 None:intergenic 40.0%
! TGTTTTCGCAGTTGATCTTG+TGG + chr1_4:22106368-22106387 Msa0156260:intron 40.0%
TCACGGGTACATAATACTTC+TGG + chr1_4:22106552-22106571 Msa0156260:intron 40.0%
ATTGTACCAGCAAGACTTCT+GGG + chr1_4:22106622-22106641 Msa0156260:intron 40.0%
TTTGAGCGGTTCAATTTCGA+TGG - chr1_4:22106668-22106687 None:intergenic 40.0%
! AGCTGGTTCAGTTATTTGAG+CGG - chr1_4:22106682-22106701 None:intergenic 40.0%
CTGAACCAGCTAGTTAAGTT+TGG + chr1_4:22106691-22106710 Msa0156260:intron 40.0%
AGGAGTTAGACCATGTTTCT+TGG - chr1_4:22106835-22106854 None:intergenic 40.0%
AATTATCGGTGCAACATCTG+TGG + chr1_4:22106905-22106924 Msa0156260:CDS 40.0%
GTACTTGCGAAAACGTTATG+CGG + chr1_4:22107119-22107138 Msa0156260:three_prime_UTR 40.0%
AAAAACGATGTGCACGAGTG+TGG + chr1_4:22102388-22102407 Msa0156260:five_prime_UTR 45.0%
GATAAGCTGCTAAGAAGCCA+TGG + chr1_4:22102490-22102509 Msa0156260:exon 45.0%
! GTGTTGTTGAGAGACAGTGA+TGG - chr1_4:22102569-22102588 None:intergenic 45.0%
! GAAGAAGATGCTTTCTGAGG+AGG + chr1_4:22102609-22102628 Msa0156260:CDS 45.0%
!! CTGCAATGGATTGTTGATGG+CGG - chr1_4:22102663-22102682 None:intergenic 45.0%
! GGGGCCAAAATTGATTCCAA+AGG - chr1_4:22103092-22103111 None:intergenic 45.0%
!! AATTTTGGCCCCTCTAGAAG+TGG + chr1_4:22103100-22103119 Msa0156260:intron 45.0%
ACAGAAATTGTTGGCACCTG+GGG - chr1_4:22103231-22103250 None:intergenic 45.0%
CACAGAAATTGTTGGCACCT+GGG - chr1_4:22103232-22103251 None:intergenic 45.0%
ACACAGAAATTGTTGGCACC+TGG - chr1_4:22103233-22103252 None:intergenic 45.0%
TTGGCGCACTAGTGAATGAT+AGG + chr1_4:22103289-22103308 Msa0156260:intron 45.0%
GGATTGATCCTCCGATTAGT+TGG + chr1_4:22103310-22103329 Msa0156260:intron 45.0%
! TCCTCCGATTAGTTGGTTCT+TGG + chr1_4:22103317-22103336 Msa0156260:intron 45.0%
TCCAAGAACCAACTAATCGG+AGG - chr1_4:22103321-22103340 None:intergenic 45.0%
CTGATCTCTACATTGCTAGC+TGG + chr1_4:22104190-22104209 Msa0156260:CDS 45.0%
AGTTACTTACGCGACAATGC+AGG + chr1_4:22104442-22104461 Msa0156260:CDS 45.0%
! GGTTGATGCGGCAAATATCA+AGG + chr1_4:22104474-22104493 Msa0156260:CDS 45.0%
GAGAAAAGCCTTAAGCGTCT+TGG + chr1_4:22104505-22104524 Msa0156260:CDS 45.0%
AACAATGCAACGTAGCGATC+TGG - chr1_4:22104809-22104828 None:intergenic 45.0%
GATCGCTACGTTGCATTGTT+TGG + chr1_4:22104809-22104828 Msa0156260:CDS 45.0%
! ACACTAGGCCTCCATTTTGA+AGG - chr1_4:22104851-22104870 None:intergenic 45.0%
TGTTCAACAAACGGCACACT+AGG - chr1_4:22104866-22104885 None:intergenic 45.0%
!!! GTTTTGACTTAGAGAAGCCG+AGG + chr1_4:22104987-22105006 Msa0156260:intron 45.0%
GTCCATGCAGCTAAAGTTGA+GGG + chr1_4:22105344-22105363 Msa0156260:CDS 45.0%
CAAGCAAGCTATAGCTGTTC+TGG - chr1_4:22105391-22105410 None:intergenic 45.0%
!! TTTTAGTTGCCAGAGGTGCA+AGG + chr1_4:22105746-22105765 Msa0156260:intron 45.0%
! GGCATACATTCTCCTGCTTT+TGG + chr1_4:22105842-22105861 Msa0156260:intron 45.0%
AGTCCAGTTGAACCCTAACT+TGG + chr1_4:22106039-22106058 Msa0156260:intron 45.0%
ACTCCAAGTTAGGGTTCAAC+TGG - chr1_4:22106045-22106064 None:intergenic 45.0%
AGTTGAACCCTAACTTGGAG+TGG + chr1_4:22106044-22106063 Msa0156260:intron 45.0%
GTTGAACCCTAACTTGGAGT+GGG + chr1_4:22106045-22106064 Msa0156260:intron 45.0%
TTGAACCCTAACTTGGAGTG+GGG + chr1_4:22106046-22106065 Msa0156260:intron 45.0%
GCACCATGACCCTTAATTAG+AGG + chr1_4:22106290-22106309 Msa0156260:intron 45.0%
TTGCTATCCTATTCCCCACT+AGG + chr1_4:22106423-22106442 Msa0156260:CDS 45.0%
GGAAGATTGAATCTCTTCCC+TGG + chr1_4:22106501-22106520 Msa0156260:CDS 45.0%
CATTGTACCAGCAAGACTTC+TGG + chr1_4:22106621-22106640 Msa0156260:intron 45.0%
!! CTTGAGTTGGCCAAGAAACA+TGG + chr1_4:22106822-22106841 Msa0156260:CDS 45.0%
TGTGAGAGATCGTCCATTCA+TGG + chr1_4:22106875-22106894 Msa0156260:CDS 45.0%
GTCATGACTTCTGCTGGTAA+AGG - chr1_4:22106975-22106994 None:intergenic 45.0%
TTACCAGCAGAAGTCATGAC+AGG + chr1_4:22106975-22106994 Msa0156260:CDS 45.0%
ATTCCTGTCATGACTTCTGC+TGG - chr1_4:22106981-22107000 None:intergenic 45.0%
AGAAATGGCAACAACGTCGG+AGG - chr1_4:22102534-22102553 None:intergenic 50.0%
!! TTGATGGCGGCACAAACAAG+AGG - chr1_4:22102650-22102669 None:intergenic 50.0%
CCAAGTTTCCGGTACTGCAA+TGG - chr1_4:22102677-22102696 None:intergenic 50.0%
! CCATTGCAGTACCGGAAACT+TGG + chr1_4:22102674-22102693 Msa0156260:CDS 50.0%
GGTCAGAGTCACCAAGTTTC+CGG - chr1_4:22102688-22102707 None:intergenic 50.0%
GTGTCAAGTTTGAATCCCCC+AGG + chr1_4:22103212-22103231 Msa0156260:intron 50.0%
CAGAAATTGTTGGCACCTGG+GGG - chr1_4:22103230-22103249 None:intergenic 50.0%
GACGTTTGGGGAGCAAAACA+CGG + chr1_4:22103752-22103771 Msa0156260:CDS 50.0%
! GCGACAATGCAGGCATTTTG+CGG + chr1_4:22104452-22104471 Msa0156260:CDS 50.0%
! CGACAATGCAGGCATTTTGC+GGG + chr1_4:22104453-22104472 Msa0156260:CDS 50.0%
!!! AGGCATTTTGCGGGTTGATG+CGG + chr1_4:22104462-22104481 Msa0156260:CDS 50.0%
AATCGGTCCCAAGACGCTTA+AGG - chr1_4:22104516-22104535 None:intergenic 50.0%
CGTCCATGCAGCTAAAGTTG+AGG + chr1_4:22105343-22105362 Msa0156260:CDS 50.0%
GTCCCTCAACTTTAGCTGCA+TGG - chr1_4:22105349-22105368 None:intergenic 50.0%
CTATCCTATTCCCCACTAGG+CGG + chr1_4:22106426-22106445 Msa0156260:CDS 50.0%
GAATCTCTTCCCTGGCTACA+TGG + chr1_4:22106509-22106528 Msa0156260:CDS 50.0%
GTTATGCGGCCGTACAAACT+GGG + chr1_4:22107133-22107152 Msa0156260:three_prime_UTR 50.0%
GATGTGCACGAGTGTGGTGT+TGG + chr1_4:22102394-22102413 Msa0156260:five_prime_UTR 55.0%
AGCTGCTAAGAAGCCATGGC+CGG + chr1_4:22102494-22102513 Msa0156260:exon 55.0%
GGAGGAGAAAGAGCAGACAC+CGG - chr1_4:22102516-22102535 None:intergenic 55.0%
TGAGGAGGACGAGAACTGTG+AGG + chr1_4:22102624-22102643 Msa0156260:CDS 55.0%
CATACTCCTAGGTCACCACC+AGG - chr1_4:22103181-22103200 None:intergenic 55.0%
! TGCCAGAGGTGCAAGGTTGA+AGG + chr1_4:22105753-22105772 Msa0156260:intron 55.0%
CACCTTCAACCTTGCACCTC+TGG - chr1_4:22105758-22105777 None:intergenic 55.0%
! CAGAGGTGCAAGGTTGAAGG+TGG + chr1_4:22105756-22105775 Msa0156260:intron 55.0%
ACCAGCAAGACTTCTGGGTC+AGG + chr1_4:22106627-22106646 Msa0156260:intron 55.0%
ACCTGACCCAGAAGTCTTGC+TGG - chr1_4:22106631-22106650 None:intergenic 55.0%
AATCCAAGCGCGAGCTGAAC+AGG - chr1_4:22106855-22106874 None:intergenic 55.0%
CGTTATGCGGCCGTACAAAC+TGG + chr1_4:22107132-22107151 Msa0156260:three_prime_UTR 55.0%
GAAAGAGCAGACACCGGCCA+TGG - chr1_4:22102510-22102529 None:intergenic 60.0%
AAAACCCGGCCTGTAACCCC+AGG + chr1_4:22103149-22103168 Msa0156260:intron 60.0%
AAACCCGGCCTGTAACCCCA+GGG + chr1_4:22103150-22103169 Msa0156260:intron 60.0%
AATCCCTGGGGTTACAGGCC+GGG - chr1_4:22103156-22103175 None:intergenic 60.0%
CAATCCCTGGGGTTACAGGC+CGG - chr1_4:22103157-22103176 None:intergenic 60.0%
AGGCCAATCCCTGGGGTTAC+AGG - chr1_4:22103161-22103180 None:intergenic 60.0%
!! TGTAACCCCAGGGATTGGCC+TGG + chr1_4:22103160-22103179 Msa0156260:intron 60.0%
TCACCACCAGGCCAATCCCT+GGG - chr1_4:22103169-22103188 None:intergenic 60.0%
!! GATTGGCCTGGTGGTGACCT+AGG + chr1_4:22103172-22103191 Msa0156260:intron 60.0%
TCCTATTCCCCACTAGGCGG+CGG + chr1_4:22106429-22106448 Msa0156260:CDS 60.0%
! AGAGTGTTCCGCCGCCTAGT+GGG - chr1_4:22106440-22106459 None:intergenic 60.0%
ACTCCTGTTCAGCTCGCGCT+TGG + chr1_4:22106849-22106868 Msa0156260:CDS 60.0%
CGGCCTGTAACCCCAGGGAT+TGG + chr1_4:22103155-22103174 Msa0156260:intron 65.0%
!! AACCCCAGGGATTGGCCTGG+TGG + chr1_4:22103163-22103182 Msa0156260:intron 65.0%
CACCACCAGGCCAATCCCTG+GGG - chr1_4:22103168-22103187 None:intergenic 65.0%
GTCACCACCAGGCCAATCCC+TGG - chr1_4:22103170-22103189 None:intergenic 65.0%
TCCGCCGCCTAGTGGGGAAT+AGG - chr1_4:22106433-22106452 None:intergenic 65.0%
GAGTGTTCCGCCGCCTAGTG+GGG - chr1_4:22106439-22106458 None:intergenic 65.0%
!! GAGAGTGTTCCGCCGCCTAG+TGG - chr1_4:22106441-22106460 None:intergenic 65.0%
CTAGGCGGCGGAACACTCTC+AGG + chr1_4:22106441-22106460 Msa0156260:CDS 65.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 22102359 22107323 22102359 ID=Msa0156260;Name=Msa0156260
chr1_4 mRNA 22102359 22107323 22102359 ID=Msa0156260-mRNA-1;Parent=Msa0156260;Name=Msa0156260-mRNA-1;_AED=0.08;_eAED=0.08;_QI=150|1|1|1|1|1|8|280|413
chr1_4 exon 22102359 22102736 22102359 ID=Msa0156260-mRNA-1:exon:7964;Parent=Msa0156260-mRNA-1
chr1_4 exon 22103750 22103845 22103750 ID=Msa0156260-mRNA-1:exon:7965;Parent=Msa0156260-mRNA-1
chr1_4 exon 22104153 22104236 22104153 ID=Msa0156260-mRNA-1:exon:7966;Parent=Msa0156260-mRNA-1
chr1_4 exon 22104400 22104560 22104400 ID=Msa0156260-mRNA-1:exon:7967;Parent=Msa0156260-mRNA-1
chr1_4 exon 22104805 22104922 22104805 ID=Msa0156260-mRNA-1:exon:7968;Parent=Msa0156260-mRNA-1
chr1_4 exon 22105293 22105428 22105293 ID=Msa0156260-mRNA-1:exon:7969;Parent=Msa0156260-mRNA-1
chr1_4 exon 22106379 22106557 22106379 ID=Msa0156260-mRNA-1:exon:7970;Parent=Msa0156260-mRNA-1
chr1_4 exon 22106804 22107323 22106804 ID=Msa0156260-mRNA-1:exon:7971;Parent=Msa0156260-mRNA-1
chr1_4 five_prime_UTR 22102359 22102508 22102359 ID=Msa0156260-mRNA-1:five_prime_utr;Parent=Msa0156260-mRNA-1
chr1_4 CDS 22102509 22102736 22102509 ID=Msa0156260-mRNA-1:cds;Parent=Msa0156260-mRNA-1
chr1_4 CDS 22103750 22103845 22103750 ID=Msa0156260-mRNA-1:cds;Parent=Msa0156260-mRNA-1
chr1_4 CDS 22104153 22104236 22104153 ID=Msa0156260-mRNA-1:cds;Parent=Msa0156260-mRNA-1
chr1_4 CDS 22104400 22104560 22104400 ID=Msa0156260-mRNA-1:cds;Parent=Msa0156260-mRNA-1
chr1_4 CDS 22104805 22104922 22104805 ID=Msa0156260-mRNA-1:cds;Parent=Msa0156260-mRNA-1
chr1_4 CDS 22105293 22105428 22105293 ID=Msa0156260-mRNA-1:cds;Parent=Msa0156260-mRNA-1
chr1_4 CDS 22106379 22106557 22106379 ID=Msa0156260-mRNA-1:cds;Parent=Msa0156260-mRNA-1
chr1_4 CDS 22106804 22107043 22106804 ID=Msa0156260-mRNA-1:cds;Parent=Msa0156260-mRNA-1
chr1_4 three_prime_UTR 22107044 22107323 22107044 ID=Msa0156260-mRNA-1:three_prime_utr;Parent=Msa0156260-mRNA-1
Gene Sequence

>Msa0156260

ATGGCCGGTGTCTGCTCTTTCTCCTCCGACGTTGTTGCCATTTCTCATTCTCTCACACCATCACTGTCTCTCAACAACACTACACTTTCAACAACAAGTAGAAGAAGATGCTTTCTGAGGAGGACGAGAACTGTGAGGCCTCTTGTTTGTGCCGCCATCAACAATCCATTGCAGTACCGGAAACTTGGTGACTCTGACCTTAATATCAGTGAAATCACTCTTGGTACTATGACGTTTGGGGAGCAAAACACGGAAAAAGAATCTCATGACATACTCAATTATGCATTTGAGAATGGCATTAATGCTCTTGATACTGCTGAGGCTTACCCGATTCCAATGAAGAAAGAGACACAAGGAAAAACTGATCTCTACATTGCTAGCTGGCTGAAATCTCAATCTCGTGACAAGATTATCATAGCAACAAAAGTTTGCGGTTATTCTGAGAGGTCGAGTTACTTACGCGACAATGCAGGCATTTTGCGGGTTGATGCGGCAAATATCAAGGAAAGTGTGGAGAAAAGCCTTAAGCGTCTTGGGACCGATTATATTGATTTGTTGCAAATTCATTGGCCAGATCGCTACGTTGCATTGTTTGGTGAATATTCTTATGATCCTTCAAAATGGAGGCCTAGTGTGCCGTTTGTTGAACAGTTGCAAGCTTTTCAAGAACTTATCAATGAAGGAAAGGTACGTTACATAGGTGTTTCAAATGAGACTTCATATGGAGTGATGGAATTCGTCCATGCAGCTAAAGTTGAGGGACTTCCAAAGATTGTCAGTATCCAGAACAGCTATAGCTTGCTTGTAAGAAGTCGTTTTGAAGTTGATCTTGTGGAAGTTTGCCATCCAAATAATTGCAACATTGGCTTGCTATCCTATTCCCCACTAGGCGGCGGAACACTCTCAGGAAAATATATAGATATAAATTCTAAAGCTGCAAAAAGTGGAAGATTGAATCTCTTCCCTGGCTACATGGAAAGATATAACCAATCAATTTCACGGGAAGCAACTATTAAGTATCTTGAGTTGGCCAAGAAACATGGTCTAACTCCTGTTCAGCTCGCGCTTGGATTTGTGAGAGATCGTCCATTCATGGCGAGTTCAATTATCGGTGCAACATCTGTGGACCAACTAAAAGAAGACATCGATGCTTTTACAACAACTGAACGGCCTTTACCAGCAGAAGTCATGACAGGAATTGAAGCTATCTTCAAGAGATACAAAGATCCTAGCATCCTTTAA

Protein sequence

>Msa0156260

MAGVCSFSSDVVAISHSLTPSLSLNNTTLSTTSRRRCFLRRTRTVRPLVCAAINNPLQYRKLGDSDLNISEITLGTMTFGEQNTEKESHDILNYAFENGINALDTAEAYPIPMKKETQGKTDLYIASWLKSQSRDKIIIATKVCGYSERSSYLRDNAGILRVDAANIKESVEKSLKRLGTDYIDLLQIHWPDRYVALFGEYSYDPSKWRPSVPFVEQLQAFQELINEGKVRYIGVSNETSYGVMEFVHAAKVEGLPKIVSIQNSYSLLVRSRFEVDLVEVCHPNNCNIGLLSYSPLGGGTLSGKYIDINSKAAKSGRLNLFPGYMERYNQSISREATIKYLELAKKHGLTPVQLALGFVRDRPFMASSIIGATSVDQLKEDIDAFTTTERPLPAEVMTGIEAIFKRYKDPSIL*