AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0307820

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0307820 MtrunA17_Chr2g0277021 98.544 412 6 0 100 511 296 707 0.0 814
Msa0307820 MtrunA17_Chr2g0277021 100.000 100 0 0 1 100 86 185 5.09e-60 210
Msa0307820 MtrunA17_Chr4g0049501 56.053 380 167 0 89 468 266 645 5.09e-143 426
Msa0307820 MtrunA17_Chr4g0049501 48.837 86 42 1 1 84 68 153 1.68e-18 89.0
Msa0307820 MtrunA17_Chr2g0279901 55.263 380 170 0 89 468 268 647 5.82e-142 424
Msa0307820 MtrunA17_Chr2g0279901 45.545 101 51 2 1 99 71 169 3.90e-19 90.9
Msa0307820 MtrunA17_Chr8g0388761 49.280 347 163 6 100 437 267 609 1.09e-98 311
Msa0307820 MtrunA17_Chr8g0388761 40.367 109 48 4 1 99 53 154 3.69e-12 68.9
Msa0307820 MtrunA17_Chr8g0388671 49.280 347 163 6 100 437 267 609 2.79e-98 310
Msa0307820 MtrunA17_Chr8g0388671 44.000 100 51 4 4 99 56 154 2.24e-12 69.7
Msa0307820 MtrunA17_Chr7g0262821 44.581 406 204 9 100 492 241 638 9.92e-97 306
Msa0307820 MtrunA17_Chr7g0262821 42.574 101 43 4 8 99 31 125 1.12e-11 67.4
Msa0307820 MtrunA17_Chr7g0223181 49.412 340 160 5 101 432 242 577 1.28e-96 306
Msa0307820 MtrunA17_Chr7g0223181 41.905 105 46 4 8 103 31 129 4.16e-12 68.6
Msa0307820 MtrunA17_Chr4g0031301 44.828 406 203 8 101 489 242 643 1.49e-96 305
Msa0307820 MtrunA17_Chr4g0031301 43.750 96 49 3 8 99 31 125 4.62e-12 68.6
Msa0307820 MtrunA17_Chr4g0031321 48.580 352 162 6 101 444 242 582 2.90e-96 305
Msa0307820 MtrunA17_Chr4g0031321 44.792 96 48 3 8 99 31 125 1.16e-12 70.5
Msa0307820 MtrunA17_Chr7g0223291 44.776 402 200 8 101 485 242 638 9.54e-96 303
Msa0307820 MtrunA17_Chr7g0223291 40.952 105 47 4 8 103 31 129 1.12e-11 67.4
Msa0307820 MtrunA17_Chr4g0073741 48.571 350 165 7 101 442 241 583 2.39e-94 300
Msa0307820 MtrunA17_Chr4g0073741 40.000 100 55 3 8 103 30 128 1.87e-11 66.6
Msa0307820 MtrunA17_Chr2g0284681 44.444 342 170 8 101 432 245 576 2.38e-76 251
Msa0307820 MtrunA17_Chr7g0221661 42.319 345 183 9 100 435 243 580 6.70e-75 248
Msa0307820 MtrunA17_Chr7g0233311 41.975 324 179 4 100 418 243 562 7.36e-74 245
Msa0307820 MtrunA17_Chr7g0233311 43.689 103 53 3 2 100 27 128 1.75e-14 76.3
Msa0307820 MtrunA17_Chr2g0298851 43.077 325 174 6 100 418 243 562 3.12e-73 243
Msa0307820 MtrunA17_Chr2g0298851 41.000 100 54 3 4 99 29 127 2.82e-11 65.9
Msa0307820 MtrunA17_Chr2g0293581 39.305 374 213 6 69 435 216 582 2.33e-71 238
Msa0307820 MtrunA17_Chr7g0223751 41.667 324 178 6 100 418 243 560 1.07e-70 237
Msa0307820 MtrunA17_Chr7g0223751 41.748 103 53 4 2 99 27 127 9.73e-12 67.4
Msa0307820 MtrunA17_Chr8g0350731 41.667 324 178 6 100 418 271 588 2.33e-70 237
Msa0307820 MtrunA17_Chr8g0350731 44.792 96 48 3 8 99 61 155 1.17e-11 67.4
Msa0307820 MtrunA17_Chr2g0287631 37.405 393 232 6 69 454 215 600 2.81e-70 236
Msa0307820 MtrunA17_Chr2g0287631 43.564 101 42 4 8 99 33 127 2.82e-11 65.9
Msa0307820 MtrunA17_Chr7g0223721 41.486 323 179 5 100 417 243 560 7.33e-70 234
Msa0307820 MtrunA17_Chr7g0223721 42.157 102 54 3 2 99 27 127 3.10e-11 65.9
Msa0307820 MtrunA17_Chr7g0223631 40.000 335 190 6 89 418 218 546 1.61e-69 233
Msa0307820 MtrunA17_Chr7g0223631 43.750 96 49 3 8 99 33 127 3.86e-11 65.5
Msa0307820 MtrunA17_Chr6g0462601 40.118 339 190 6 102 432 243 576 2.18e-68 231
Msa0307820 MtrunA17_Chr7g0223731 41.358 324 179 6 100 418 243 560 6.05e-68 229
Msa0307820 MtrunA17_Chr7g0223731 41.667 96 51 3 8 99 33 127 7.09e-11 64.7
Msa0307820 MtrunA17_Chr7g0223541 40.741 324 182 6 100 418 200 518 2.81e-67 227
Msa0307820 MtrunA17_Chr7g0223781 38.938 339 199 5 100 435 243 576 4.79e-67 227
Msa0307820 MtrunA17_Chr7g0223621 38.592 355 199 9 100 444 243 588 4.25e-66 224
Msa0307820 MtrunA17_Chr7g0223621 41.667 96 51 3 8 99 33 127 5.06e-11 65.1
Msa0307820 MtrunA17_Chr7g0217971 40.741 324 181 6 100 418 219 536 5.55e-66 224
Msa0307820 MtrunA17_Chr7g0217971 43.137 102 53 3 2 99 27 127 2.47e-12 69.3
Msa0307820 MtrunA17_Chr5g0427901 40.373 322 182 5 101 417 255 571 6.32e-66 224
Msa0307820 MtrunA17_Chr5g0427901 41.176 102 55 3 2 99 27 127 2.14e-11 66.2
Msa0307820 MtrunA17_Chr8g0390821 40.867 323 181 5 100 417 281 598 1.79e-65 224
Msa0307820 MtrunA17_Chr2g0298861 39.198 324 186 6 100 417 254 572 4.31e-65 222
Msa0307820 MtrunA17_Chr4g0040931 38.136 354 206 6 69 417 215 560 1.15e-64 221
Msa0307820 MtrunA17_Chr4g0040931 42.157 102 54 3 2 99 27 127 8.60e-12 67.8
Msa0307820 MtrunA17_Chr7g0248151 38.764 356 203 8 69 418 215 561 5.49e-64 219
Msa0307820 MtrunA17_Chr6g0462611 38.235 340 199 6 102 435 193 527 7.41e-64 219
Msa0307820 MtrunA17_Chr7g0245531 45.349 258 135 4 166 418 2 258 1.14e-63 209
Msa0307820 MtrunA17_Chr7g0223031 39.155 355 202 8 69 418 215 560 1.79e-63 218
Msa0307820 MtrunA17_Chr7g0223031 41.748 103 55 3 2 100 27 128 9.08e-13 70.9
Msa0307820 MtrunA17_Chr7g0223711 36.103 349 211 6 101 442 244 587 4.73e-63 216
Msa0307820 MtrunA17_Chr7g0223711 42.708 96 50 3 8 99 33 127 1.60e-11 66.6
Msa0307820 MtrunA17_Chr7g0223851 40.000 325 183 7 100 418 252 570 5.18e-63 216
Msa0307820 MtrunA17_Chr7g0223851 42.268 97 51 3 8 100 42 137 3.38e-11 65.9
Msa0307820 MtrunA17_Chr7g0223681 37.113 388 225 10 69 448 126 502 6.51e-63 214
Msa0307820 MtrunA17_Chr7g0223741 38.889 324 188 5 100 418 243 561 9.64e-63 215
Msa0307820 MtrunA17_Chr7g0223741 40.196 102 56 3 2 99 27 127 6.25e-12 68.2
Msa0307820 MtrunA17_Chr6g0462681 38.462 338 195 6 102 431 243 575 1.07e-62 216
Msa0307820 MtrunA17_Chr6g0462681 43.137 102 43 4 8 100 31 126 6.64e-11 65.1
Msa0307820 MtrunA17_Chr7g0248131 38.202 356 205 8 69 418 217 563 1.52e-62 215
Msa0307820 MtrunA17_Chr7g0248131 43.689 103 52 4 3 100 28 129 1.84e-12 69.7
Msa0307820 MtrunA17_Chr7g0223831 39.506 324 184 7 101 418 216 533 3.89e-62 214
Msa0307820 MtrunA17_Chr7g0223831 43.299 97 50 3 8 100 33 128 5.01e-12 68.6
Msa0307820 MtrunA17_Chr6g0462711 36.443 343 200 6 102 431 245 582 1.32e-61 214
Msa0307820 MtrunA17_Chr6g0462711 42.593 108 47 4 2 100 27 128 2.95e-12 69.3
Msa0307820 MtrunA17_Chr7g0223801 38.701 354 203 8 69 417 214 558 1.35e-61 212
Msa0307820 MtrunA17_Chr7g0223801 42.574 101 54 3 2 99 27 126 1.96e-11 66.6
Msa0307820 MtrunA17_Chr4g0012541 38.769 325 187 7 100 418 234 552 4.06e-61 211
Msa0307820 MtrunA17_Chr2g0296391 40.767 287 161 4 100 381 243 525 3.63e-60 207
Msa0307820 MtrunA17_Chr2g0296391 57.407 54 22 1 8 61 33 85 9.55e-11 64.3
Msa0307820 MtrunA17_Chr7g0225671 39.385 325 184 8 100 418 250 567 6.21e-60 208
Msa0307820 MtrunA17_Chr7g0225671 40.566 106 58 3 2 103 34 138 1.44e-11 67.0
Msa0307820 MtrunA17_Chr7g0223701 36.111 360 208 10 102 445 245 598 6.41e-58 203
Msa0307820 MtrunA17_Chr7g0223701 44.792 96 48 3 8 99 33 127 7.30e-13 71.2
Msa0307820 MtrunA17_Chr7g0215261 37.654 324 176 6 100 418 225 527 6.33e-57 199
Msa0307820 MtrunA17_Chr7g0215261 43.137 102 43 4 8 100 33 128 2.89e-11 65.9
Msa0307820 MtrunA17_Chr6g0462771 36.025 322 188 6 102 411 243 558 2.34e-56 199
Msa0307820 MtrunA17_Chr6g0462771 43.396 106 45 4 4 100 27 126 5.81e-12 68.2
Msa0307820 MtrunA17_Chr7g0233301 38.769 325 157 8 100 418 243 531 1.38e-55 196
Msa0307820 MtrunA17_Chr7g0233301 42.453 106 56 3 2 103 27 131 1.33e-14 76.6
Msa0307820 MtrunA17_Chr6g0462641 34.451 328 199 5 102 418 243 565 2.83e-55 196
Msa0307820 MtrunA17_Chr6g0462641 42.342 111 49 4 2 103 25 129 1.82e-11 66.6
Msa0307820 MtrunA17_Chr7g0223821 39.262 298 153 8 100 390 243 519 5.49e-50 182
Msa0307820 MtrunA17_Chr7g0223761 33.746 323 161 6 101 417 6 281 3.75e-49 172
Msa0307820 MtrunA17_Chr2g0331381 35.621 306 151 6 101 401 215 479 7.18e-49 175
Msa0307820 MtrunA17_Chr2g0331381 43.137 102 54 3 2 100 24 124 1.72e-11 66.2
Msa0307820 MtrunA17_Chr1g0152001 41.296 247 137 6 177 418 2 245 1.58e-47 167
Msa0307820 MtrunA17_Chr1g0166551 30.625 480 235 13 2 429 23 456 5.36e-47 171
Msa0307820 MtrunA17_Chr6g0462861 35.974 303 180 6 102 400 232 524 2.89e-45 168
Msa0307820 MtrunA17_Chr1g0188611 42.562 242 133 4 186 422 4 244 4.08e-44 157
Msa0307820 MtrunA17_Chr2g0293601 35.526 304 151 7 69 368 215 477 2.72e-40 152
Msa0307820 MtrunA17_Chr2g0293601 40.404 99 54 3 5 99 30 127 5.62e-11 64.7
Msa0307820 MtrunA17_Chr7g0228281 32.188 320 170 5 100 418 304 577 8.51e-39 149
Msa0307820 MtrunA17_Chr7g0228281 41.748 103 55 3 2 100 88 189 1.06e-12 70.5
Msa0307820 MtrunA17_Chr5g0394221 32.258 279 179 9 162 435 71 344 1.32e-34 133
Msa0307820 MtrunA17_Chr5g0394391 38.860 193 108 4 168 352 331 521 9.10e-33 131
Msa0307820 MtrunA17_Chr7g0245541 43.448 145 80 2 274 417 1 144 1.36e-29 115
Msa0307820 MtrunA17_Chr4g0060241 38.462 195 114 5 166 355 314 507 1.51e-28 119
Msa0307820 MtrunA17_Chr6g0462691 44.526 137 71 2 186 317 4 140 3.28e-28 110
Msa0307820 MtrunA17_Chr4g0064621 33.451 284 171 8 89 363 378 652 1.40e-27 117
Msa0307820 MtrunA17_Chr5g0442171 33.831 201 110 5 157 346 132 320 1.13e-25 107
Msa0307820 MtrunA17_Chr2g0299881 41.060 151 84 2 101 250 1273 1419 2.02e-24 107
Msa0307820 MtrunA17_Chr6g0462631 38.068 176 84 3 102 273 143 297 8.16e-24 101
Msa0307820 MtrunA17_Chr2g0299821 41.497 147 81 2 101 246 244 386 2.83e-23 102
Msa0307820 MtrunA17_Chr2g0299821 51.648 91 36 2 314 396 394 484 2.05e-18 88.2
Msa0307820 MtrunA17_Chr2g0299791 40.397 151 85 2 101 250 1273 1419 4.02e-23 103
Msa0307820 MtrunA17_Chr4g0046871 47.475 99 48 2 200 294 9 107 6.49e-23 93.6
Msa0307820 MtrunA17_Chr2g0299851 40.000 150 85 2 101 249 1269 1414 9.30e-23 102
Msa0307820 MtrunA17_Chr2g0299921 37.017 181 106 3 69 248 1231 1404 1.41e-20 95.9
Msa0307820 MtrunA17_Chr2g0299921 39.706 136 77 2 101 235 1645 1776 2.24e-18 89.4
Msa0307820 MtrunA17_Chr4g0004331 27.068 266 170 5 102 352 238 494 1.71e-20 95.5
Msa0307820 MtrunA17_Chr3g0098761 29.528 254 160 7 106 352 242 483 3.73e-20 94.4
Msa0307820 MtrunA17_Chr2g0293271 33.168 202 91 4 110 311 249 406 2.10e-19 90.5
Msa0307820 MtrunA17_Chr2g0293561 35.374 147 90 2 101 246 244 386 2.27e-19 90.1
Msa0307820 MtrunA17_Chr2g0293561 59.259 54 21 1 8 61 33 85 3.43e-11 65.1
Msa0307820 MtrunA17_Chr5g0444001 26.848 257 171 5 105 352 241 489 5.68e-19 90.1
Msa0307820 MtrunA17_Chr2g0331901 28.372 215 134 4 106 306 242 450 3.44e-17 85.1
Msa0307820 MtrunA17_Chr6g0462751 42.342 111 59 2 164 269 193 303 7.17e-17 81.6
Msa0307820 MtrunA17_Chr2g0284661 38.889 144 58 4 186 306 7 143 7.51e-17 77.4
Msa0307820 MtrunA17_Chr3g0120101 29.146 199 124 5 101 286 273 467 9.23e-16 80.5
Msa0307820 MtrunA17_Chr4g0064651 38.710 93 57 0 254 346 29 121 1.91e-15 72.8
Msa0307820 MtrunA17_Chr2g0299941 50.000 68 34 0 248 315 15 82 2.25e-12 63.2
Msa0307820 MtrunA17_Chr7g0245521 42.708 96 50 3 8 99 33 127 1.07e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0307820 AT5G49910.1 86.811 417 45 4 100 510 305 717 0.0 706
Msa0307820 AT5G49910.1 80.328 122 18 2 1 122 95 210 9.57e-54 193
Msa0307820 AT4G24280.1 86.473 414 54 1 100 511 305 718 0.0 691
Msa0307820 AT4G24280.1 80.328 122 18 2 1 122 95 210 2.48e-54 195
Msa0307820 AT5G09590.1 54.737 380 172 0 89 468 272 651 3.38e-139 417
Msa0307820 AT5G09590.1 47.525 101 49 2 1 99 74 172 1.85e-18 89.4
Msa0307820 AT4G37910.1 55.000 380 171 0 89 468 267 646 1.30e-131 398
Msa0307820 AT4G37910.1 46.535 101 50 2 1 99 69 167 1.14e-17 86.7
Msa0307820 AT4G37910.2 55.000 380 171 0 89 468 267 646 1.30e-131 398
Msa0307820 AT4G37910.2 46.535 101 50 2 1 99 69 167 1.14e-17 86.7
Msa0307820 AT5G28540.1 49.563 343 160 6 100 433 266 604 1.61e-98 311
Msa0307820 AT5G28540.1 44.231 104 51 4 1 99 52 153 4.78e-13 72.0
Msa0307820 AT5G02500.1 49.118 340 161 5 101 432 242 577 5.99e-98 310
Msa0307820 AT5G02500.1 40.000 100 55 3 8 103 31 129 2.92e-11 66.6
Msa0307820 AT5G42020.1 43.878 392 204 6 100 479 266 653 1.45e-97 309
Msa0307820 AT5G42020.1 45.545 101 48 4 4 99 55 153 4.82e-13 72.0
Msa0307820 AT5G42020.3 43.878 392 204 6 100 479 271 658 2.18e-97 309
Msa0307820 AT5G42020.3 45.545 101 48 4 4 99 60 158 4.52e-13 72.4
Msa0307820 AT5G02490.1 46.739 368 181 6 101 457 242 605 2.51e-97 308
Msa0307820 AT3G09440.1 50.440 341 157 6 100 432 241 577 2.01e-96 305
Msa0307820 AT3G09440.4 50.440 341 157 6 100 432 241 577 2.01e-96 305
Msa0307820 AT3G09440.2 50.440 341 157 6 100 432 241 577 2.01e-96 305
Msa0307820 AT3G09440.3 50.440 341 157 6 100 432 241 577 2.01e-96 305
Msa0307820 AT3G12580.1 48.824 340 162 5 101 432 242 577 7.13e-96 304
Msa0307820 AT3G12580.1 38.000 100 57 3 8 103 31 129 5.65e-11 65.5
Msa0307820 AT1G16030.1 46.307 352 177 5 101 444 241 588 1.04e-92 296
Msa0307820 AT1G56410.1 46.221 344 175 4 101 438 242 581 2.35e-92 294
Msa0307820 AT1G56410.1 41.000 100 54 3 8 103 31 129 1.08e-11 67.8
Msa0307820 AT1G09080.1 48.703 347 165 6 100 437 280 622 8.00e-86 278
Msa0307820 AT1G09080.1 43.158 95 50 3 8 99 74 167 1.37e-11 67.4
Msa0307820 AT1G09080.2 48.703 347 165 6 100 437 270 612 8.25e-86 278
Msa0307820 AT1G09080.2 43.158 95 50 3 8 99 64 157 1.50e-11 67.4
Msa0307820 AT5G42020.2 49.416 257 120 4 100 350 266 518 2.81e-71 238
Msa0307820 AT5G42020.2 45.545 101 48 4 4 99 55 153 4.80e-13 72.0
Msa0307820 AT2G32120.1 38.693 199 116 2 162 354 315 513 1.08e-33 134
Msa0307820 AT2G32120.2 38.693 199 116 2 162 354 315 513 1.08e-33 134
Msa0307820 AT5G02500.2 43.421 152 81 2 101 251 242 389 4.09e-29 120
Msa0307820 AT5G02500.2 40.000 100 55 3 8 103 31 129 3.19e-11 66.2
Msa0307820 AT1G79920.1 25.939 293 184 9 79 352 216 494 1.34e-19 92.8
Msa0307820 AT4G16660.1 29.302 215 135 5 101 302 272 482 1.90e-19 92.4
Msa0307820 AT1G79920.3 25.939 293 184 9 79 352 216 494 1.96e-19 92.4
Msa0307820 AT1G79920.2 25.939 293 184 9 79 352 216 494 1.96e-19 92.4
Msa0307820 AT1G79920.4 25.939 293 184 9 79 352 216 494 1.96e-19 92.4
Msa0307820 AT4G16660.2 29.302 215 135 5 101 302 296 506 2.02e-19 92.4
Msa0307820 AT1G11660.2 25.547 274 187 6 102 366 202 467 3.12e-19 91.7
Msa0307820 AT1G11660.4 25.547 274 187 6 102 366 239 504 3.34e-19 91.7
Msa0307820 AT1G11660.3 25.547 274 187 6 102 366 239 504 3.34e-19 91.7
Msa0307820 AT1G11660.1 25.547 274 187 6 102 366 239 504 3.34e-19 91.7
Msa0307820 AT1G79930.1 25.939 293 184 9 79 352 216 494 4.55e-19 91.3
Msa0307820 AT1G79930.2 25.939 293 184 9 79 352 216 494 5.57e-19 90.9

Find 370 sgRNAs with CRISPR-Local

Find 538 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTTCTGTTGGTGGATAATT+TGG 0.092404 2_4:+968227 None:intergenic
GGTGGGAAGGGTAGTGTTTC+TGG 0.104549 2_4:+966318 None:intergenic
TCCAATTCCTCTTGGTATTC+TGG 0.133724 2_4:-964987 Msa0307820:three_prime_UTR
GTTTGTAATATTAGATAAAT+TGG 0.146075 2_4:-964012 Msa0307820:three_prime_UTR
TTCAAACAACTCCCCAAATT+AGG 0.163204 2_4:-968423 Msa0307820:five_prime_UTR
ATGAAACCCTAACCCTAATT+TGG 0.168091 2_4:+968410 None:intergenic
TCTGTGTTCGTATGCTTATC+TGG 0.168659 2_4:-963921 Msa0307820:three_prime_UTR
AGAAACCAAGGCCGTGTATT+TGG 0.174826 2_4:+968357 None:intergenic
CTGCTGCTGCTGCCGCTGTT+GGG 0.178392 2_4:-964060 Msa0307820:three_prime_UTR
GTAACAATGGAGAGTGATTT+TGG 0.182896 2_4:-963236 Msa0307820:three_prime_UTR
ATTACCTACTAAATAAAATA+AGG 0.195966 2_4:+962809 Msa0307810:five_prime_UTR
CCACGGTTTGCATCAGTTAA+AGG 0.197029 2_4:+963956 Msa0307810:CDS
GAGCTTAAAGATGCTATTTC+TGG 0.211733 2_4:-965701 Msa0307820:CDS
GACGAGTCTGTCGCCGTTCT+TGG 0.217047 2_4:+968056 None:intergenic
CGTCAAATGTGCATTCAATT+TGG 0.227303 2_4:+963050 Msa0307810:five_prime_UTR
AGTTATAGAGATTATTTAAT+AGG 0.230973 2_4:-965474 Msa0307820:three_prime_UTR
TGCCCTTGGGGCTGCAGTTC+AGG 0.235738 2_4:-966610 Msa0307820:intron
AAGGGAATTATTACCATAAA+AGG 0.243270 2_4:-962947 Msa0307820:three_prime_UTR
CCATGGCATCTTTAATAGTT+TGG 0.245937 2_4:+965669 None:intergenic
AATGAATGCCATGCCTCTTT+TGG 0.250553 2_4:+962603 Msa0307810:five_prime_UTR
GCTGCTGCTGCTGCCGCTGT+TGG 0.252491 2_4:-964061 Msa0307820:three_prime_UTR
TTATCTGGGGAGATTGATTT+TGG 0.255814 2_4:-963906 Msa0307820:three_prime_UTR
TAGCGTTTCTCTAACAAATA+TGG 0.260963 2_4:-963810 Msa0307820:three_prime_UTR
TTTAGTAATAGTTTCCTCTT+TGG 0.273377 2_4:-962629 Msa0307820:three_prime_UTR
TTCTCCATTGTCCTTGGGTT+TGG 0.279104 2_4:-966374 Msa0307820:CDS
GACGCACGTTTCTGTATCTT+TGG 0.280336 2_4:-965348 Msa0307820:three_prime_UTR
AGAGGCATGGCATTCATTAC+TGG 0.286065 2_4:-962598 Msa0307820:three_prime_UTR
CTTCCCTGTGCCCTTGTCTA+TGG 0.287108 2_4:+966093 None:intergenic
CTGGTTAAGCATACCATAAA+AGG 0.289084 2_4:-962966 Msa0307820:three_prime_UTR
TCCTGCTAACCGGTGCCCTT+GGG 0.297149 2_4:-962992 Msa0307820:three_prime_UTR
AATGATGCAACTTTGTATAA+AGG 0.300744 2_4:-965168 Msa0307820:three_prime_UTR
GTGCTTCTTCCGTGCTAAAT+TGG 0.303995 2_4:-965437 Msa0307820:three_prime_UTR
GTAAAATTTCTTTGCAGTTA+TGG 0.308820 2_4:+963333 Msa0307810:CDS
GTTACCGAAGAAAAGGGTTT+TGG 0.309192 2_4:+968293 None:intergenic
TGTAGAAATTAATGTCCTTC+AGG 0.311881 2_4:-966251 Msa0307820:CDS
GAGAAATGCTAATAATAAAT+AGG 0.312248 2_4:+963122 Msa0307810:five_prime_UTR
GTCCTGCTAACCGGTGCCCT+TGG 0.313080 2_4:-962993 Msa0307820:three_prime_UTR
TCAAACAACTCCCCAAATTA+GGG 0.314528 2_4:-968422 Msa0307820:five_prime_UTR
GACAGCTGAGAAAGCTAAAA+TGG 0.319675 2_4:-967207 Msa0307820:CDS
AGATGTTTCTCCATTGTCCT+TGG 0.323323 2_4:-966380 Msa0307820:CDS
TGAAACCCTAACCCTAATTT+GGG 0.323385 2_4:+968411 None:intergenic
ATGCAGGTTCGTATCTTAAT+AGG 0.326245 2_4:+965225 None:intergenic
AGGGTGAGAGAGAATTTGTT+AGG 0.327608 2_4:-966231 Msa0307820:CDS
GGATGCAAAACTCTCAATTA+AGG 0.328971 2_4:-966748 Msa0307820:CDS
CATGGCATCTTTAATAGTTT+GGG 0.330953 2_4:+965670 None:intergenic
ATTTCCTTCGAAGCCACTTT+TGG 0.331266 2_4:+963728 Msa0307810:CDS
ACTAGTTAAGGATATGAAAA+AGG 0.332483 2_4:+962856 Msa0307810:five_prime_UTR
AATGTGCATTCAATTTGGTT+AGG 0.336075 2_4:+963055 Msa0307810:five_prime_UTR
CAACTCCCCAAATTAGGGTT+AGG 0.337705 2_4:-968417 Msa0307820:five_prime_UTR
AAACAGGATATTACCATTAC+TGG 0.341919 2_4:-966070 Msa0307820:CDS
TTTCTGTTGGTGGATAATTT+GGG 0.343137 2_4:+968228 None:intergenic
CTGGATTGACAGTGACATTT+GGG 0.351553 2_4:+966643 None:intergenic
GAAAGTTGTCGGTATCGATT+TGG 0.352181 2_4:-968178 Msa0307820:five_prime_UTR
TCTGGATTGACAGTGACATT+TGG 0.354339 2_4:+966642 None:intergenic
ACCAATGCATCAAGCTCTTC+AGG 0.358829 2_4:-963615 Msa0307820:three_prime_UTR
CTTTCAATTGCTTCTCAGTC+TGG 0.359163 2_4:+965780 None:intergenic
ACCAGAATACCAAGAGGAAT+TGG 0.364370 2_4:+964986 None:intergenic
AAGAGTGGTCTCAATATGTT+TGG 0.366947 2_4:+967013 None:intergenic
GAAACCAAGGCCGTGTATTT+GGG 0.367690 2_4:+968358 None:intergenic
TAATAATAGATGGAGAAAAC+AGG 0.371647 2_4:+963288 Msa0307810:exon
ATTGATGAGGTGATTCTTGT+TGG 0.375118 2_4:-966723 Msa0307820:CDS
AAACTCGATTGTCCAGCTAT+TGG 0.377600 2_4:-967886 Msa0307820:CDS
TTTGTAATATTAGATAAATT+GGG 0.384311 2_4:-964011 Msa0307820:three_prime_UTR
GTTATCAGATATGATGAAAA+AGG 0.385042 2_4:+963545 Msa0307810:intron
ATTGTCACGACTGGCTTGAT+TGG 0.385082 2_4:-965145 Msa0307820:three_prime_UTR
TGTGCGGACGATTCCATTGA+TGG 0.387975 2_4:-963841 Msa0307820:three_prime_UTR
ATGTGCATTCAATTTGGTTA+GGG 0.388898 2_4:+963056 Msa0307810:five_prime_UTR
ACACCACCTGGTAGCGAGTC+TGG 0.390173 2_4:-965569 Msa0307820:CDS
CCCGTTTCATTTCTAATCTA+CGG 0.392723 2_4:+968636 None:intergenic
CCTGCTGCATCTGCAGCTCC+AGG 0.394942 2_4:+965596 None:intergenic
CACGGTTTGCATCAGTTAAA+GGG 0.398468 2_4:+963957 Msa0307810:CDS
TTACTATTACTATTAAGTTA+AGG 0.402685 2_4:-962663 Msa0307820:three_prime_UTR
AACCGGTGCCCTTGGGGCAC+TGG 0.404347 2_4:-962985 Msa0307820:three_prime_UTR
GATGTTTCTCCATTGTCCTT+GGG 0.404643 2_4:-966379 Msa0307820:CDS
CGCTACATTGATGCCATCAA+TGG 0.407160 2_4:+963828 Msa0307810:CDS
AAACAAATAATAATAATAGA+TGG 0.408743 2_4:+963278 Msa0307810:exon
GGTATTCTGGTTTCTCCAGA+TGG 0.414539 2_4:-964974 Msa0307820:three_prime_UTR
ATTTAGGCTGGTGTCTTGGC+TGG 0.414758 2_4:-966427 Msa0307820:intron
AAGGTGAGTGGCATGGTTGA+TGG 0.415747 2_4:+963564 Msa0307810:CDS
TCATATCCTTAACTAGTGTC+CGG 0.416463 2_4:-962850 Msa0307820:three_prime_UTR
ACTGCTTTCCGGCTCGCTAA+TGG 0.420294 2_4:+965044 None:intergenic
CCAAGGGCAACCACTTCATC+TGG 0.421073 2_4:+966624 None:intergenic
TTCTCTGTGAAGAGGTTCAT+TGG 0.423406 2_4:-967985 Msa0307820:CDS
CACAGAGAAGAAGGTGTTCT+CGG 0.423446 2_4:+967999 None:intergenic
TCCTCTTTGGATTCCAAAAG+AGG 0.423801 2_4:-962616 Msa0307820:three_prime_UTR
AGAGTTGTTGATTGGTTGGC+TGG 0.425635 2_4:-967296 Msa0307820:CDS
GTGGGAAGGGTAGTGTTTCT+GGG 0.426262 2_4:+966319 None:intergenic
ATGAATGGAAGGAAATGAAA+AGG 0.427790 2_4:+968529 None:intergenic
CCCCAAGGGCACCGGTTAGC+AGG 0.429921 2_4:+962991 Msa0307810:five_prime_UTR
ATTATTAGGGTCCTGCTAAC+CGG 0.430847 2_4:-963002 Msa0307820:three_prime_UTR
CAGATGAAGTGGTTGCCCTT+GGG 0.432611 2_4:-966623 Msa0307820:CDS
TGCGGAACCCCACGGGGAGC+AGG 0.433702 2_4:+966166 None:intergenic
CTGTGTTCGTATGCTTATCT+GGG 0.437217 2_4:-963920 Msa0307820:three_prime_UTR
TCTTACAAGGGCTAAATTTG+AGG 0.438497 2_4:-966994 Msa0307820:CDS
AAAGTTGTCGGTATCGATTT+GGG 0.440783 2_4:-968177 Msa0307820:five_prime_UTR
AGAGTGGTCTCAATATGTTT+GGG 0.441226 2_4:+967014 None:intergenic
ATTGAAAGAGCTAGGAGAAA+AGG 0.442500 2_4:-965765 Msa0307820:CDS
GGACCCTAATAATAAATATG+AGG 0.442865 2_4:+963012 Msa0307810:five_prime_UTR
TGAGACGGTTACCGAAGAAA+AGG 0.443785 2_4:+968286 None:intergenic
ACCGTAGATTAGAAATGAAA+CGG 0.444068 2_4:-968637 Msa0307820:five_prime_UTR
GGTAGGTTTGCCACCTTCCA+TGG 0.444552 2_4:+968131 None:intergenic
ACCTTCGGCGTTGGTGATGA+TGG 0.444925 2_4:+968110 None:intergenic
TTACCTACTAAATAAAATAA+GGG 0.445654 2_4:+962810 Msa0307810:five_prime_UTR
GAGCTTGTTTGTCCTTCAAA+AGG 0.446462 2_4:+967246 None:intergenic
GACTATAGAGAGTTGTTGAT+TGG 0.448100 2_4:-967304 Msa0307820:intron
CGGTCAGATTGCCAAGCGTC+AGG 0.448199 2_4:-968034 Msa0307820:CDS
ATTGATTTAGGCTGGTGTCT+TGG 0.448822 2_4:-966431 Msa0307820:intron
CGATGGGGTCCTCAAGTATG+TGG 0.449347 2_4:+963380 Msa0307810:CDS
GATAGATTAGATCAGATCAT+AGG 0.449844 2_4:-963194 Msa0307820:three_prime_UTR
TGCCATGGCTGCCCTCAATC+AGG 0.451859 2_4:-965654 Msa0307820:CDS
AACACGTATCCCTGCTGTTC+AGG 0.452328 2_4:-966694 Msa0307820:CDS
TTGGGCGAGCTTCTCACTCT+TGG 0.453525 2_4:-963993 Msa0307820:three_prime_UTR
ACGAAGCAATGGGGCTCCTC+CGG 0.453539 2_4:-963697 Msa0307820:three_prime_UTR
GCCACCTTCCATGGCGGCGA+CGG 0.457667 2_4:+968140 None:intergenic
AACTCCCCAAATTAGGGTTA+GGG 0.459448 2_4:-968416 Msa0307820:five_prime_UTR
GTTAGGGACAATAAATCTCT+TGG 0.460837 2_4:-966214 Msa0307820:CDS
CCAGATGAAGTGGTTGCCCT+TGG 0.461546 2_4:-966624 Msa0307820:CDS
TGCTGAAGAAATTTCTGCTC+AGG 0.463110 2_4:-967851 Msa0307820:intron
AAATATGGTTCAACAGATAG+TGG 0.463281 2_4:-963795 Msa0307820:three_prime_UTR
TGAGAGAGGATGGATAGGTT+TGG 0.466095 2_4:+968564 None:intergenic
GGTGAAAGGCTTTCTGTTGG+TGG 0.466768 2_4:+968218 None:intergenic
CAAGGGCACAGGGAAGAAAC+AGG 0.466939 2_4:-966086 Msa0307820:CDS
TGGTGATTGTCTATTGTTGT+TGG 0.467442 2_4:-964036 Msa0307820:three_prime_UTR
TCTCTTCCACTTCTATCCAT+TGG 0.467921 2_4:-968480 Msa0307820:five_prime_UTR
TTTACAAGCTCCTGAACAGC+AGG 0.471374 2_4:+966684 None:intergenic
TCAATTTGGTTAGGGGAAGT+TGG 0.474010 2_4:+963064 Msa0307810:five_prime_UTR
ACCTTCCATGGCGGCGACGG+CGG 0.475434 2_4:+968143 None:intergenic
CCGTAGATTAGAAATGAAAC+GGG 0.476489 2_4:-968636 Msa0307820:five_prime_UTR
GAGGGGCCAGACTCGCTACC+AGG 0.477166 2_4:+965563 None:intergenic
TATGTTCAGATCTTCTTGAC+AGG 0.478172 2_4:-966968 Msa0307820:intron
GCTGCCCAAATACACGGCCT+TGG 0.482140 2_4:-968362 Msa0307820:five_prime_UTR
TGCTGCTGCTGCCGCTGTTG+GGG 0.483196 2_4:-964059 Msa0307820:three_prime_UTR
TAATTTGGGGAGTTGTTTGA+AGG 0.483956 2_4:+968425 None:intergenic
ATCTCTTGGTAGCTTCCGCT+TGG 0.485746 2_4:-966200 Msa0307820:CDS
ATTAACGACGGCCTGACGCT+TGG 0.485806 2_4:+968023 None:intergenic
TGCTGCTGCCGCTGTTGGGG+TGG 0.485834 2_4:-964056 Msa0307820:three_prime_UTR
AAGTTCGACATTGATGCAAA+TGG 0.486650 2_4:-966133 Msa0307820:CDS
AACACAATATCCACACCATC+TGG 0.488032 2_4:+964959 None:intergenic
AAAATAAGGGAAATGCTAAC+CGG 0.488986 2_4:+962823 Msa0307810:five_prime_UTR
CTGCATAACTTCCTGATTGA+GGG 0.491953 2_4:+965643 None:intergenic
TTCAATCTGCGGAACCCCAC+GGG 0.492109 2_4:+966159 None:intergenic
GTATTCCTCCTGCTCCCCGT+GGG 0.492587 2_4:-966174 Msa0307820:CDS
GAATGCGGCGCGAGGGAAGG+TGG 0.493111 2_4:+968251 None:intergenic
ACAGAGAAGAAGGTGTTCTC+GGG 0.493212 2_4:+968000 None:intergenic
TCATCAGGCAAGGGAGCAGA+TGG 0.493669 2_4:-965533 Msa0307820:CDS
GTAGAAATTAATGTCCTTCA+GGG 0.494626 2_4:-966250 Msa0307820:CDS
AACTCTGGTCCAATTCCTCT+TGG 0.494801 2_4:-964995 Msa0307820:three_prime_UTR
TTAACTAGTGTCCGGGGCAC+CGG 0.495343 2_4:-962842 Msa0307820:three_prime_UTR
CAAGGTACTGGCACCAGTAA+TGG 0.496725 2_4:+966057 None:intergenic
GGGTCCTCAAGTATGTGGGC+GGG 0.497126 2_4:+963385 Msa0307810:CDS
CATATCCTTAACTAGTGTCC+GGG 0.497887 2_4:-962849 Msa0307820:three_prime_UTR
TGAATGGAAGGAAATGAAAA+GGG 0.498708 2_4:+968530 None:intergenic
AGAAAAGGTGGAAGCAAAGC+TGG 0.498767 2_4:-965726 Msa0307820:CDS
GATGAGGTGATTCTTGTTGG+TGG 0.498989 2_4:-966720 Msa0307820:CDS
CAGATCCTCATTTGTTCTAA+CGG 0.499228 2_4:-963640 Msa0307820:three_prime_UTR
TTCTGTTGGTGGATAATTTG+GGG 0.500667 2_4:+968229 None:intergenic
CATTACTGGATTGCATTGGA+TGG 0.500915 2_4:-962584 Msa0307820:three_prime_UTR
TTTGGTGAGAGAGGATGGAT+AGG 0.500981 2_4:+968559 None:intergenic
GCTGCATAACTTCCTGATTG+AGG 0.501316 2_4:+965642 None:intergenic
ACTCTGCCCTTGCAACCATT+AGG 0.501732 2_4:-964902 Msa0307820:intron
CCTGGAGCTGCAGATGCAGC+AGG 0.503847 2_4:-965596 Msa0307820:CDS
GTGTATTTGGGCAGCACTTG+AGG 0.504133 2_4:+968370 None:intergenic
GGGAGTGGTACGCTGACCTT+CGG 0.504739 2_4:+968095 None:intergenic
GTCGTCAATGAGAAAGTTGT+CGG 0.504824 2_4:-968189 Msa0307820:five_prime_UTR
TGGGTTTGGAAACTCTAGGT+GGG 0.506495 2_4:-966360 Msa0307820:CDS
GAGACGGTTACCGAAGAAAA+GGG 0.506580 2_4:+968287 None:intergenic
GGCCCCTCAGAATCATCATC+AGG 0.507133 2_4:-965548 Msa0307820:CDS
CCTGCTAACCGGTGCCCTTG+GGG 0.507538 2_4:-962991 Msa0307820:three_prime_UTR
CTTGCCTGATGATGATTCTG+AGG 0.507741 2_4:+965544 None:intergenic
GAACATGATCGGCATGAGAC+CGG 0.508503 2_4:+963678 Msa0307810:CDS
ATAATATAATAATCAATGAA+TGG 0.508595 2_4:+968514 None:intergenic
TACTTTACCTAATGGTTGCA+AGG 0.509035 2_4:+964895 None:intergenic
CCCTCACTCAAACAAACATC+AGG 0.511377 2_4:-967175 Msa0307820:intron
AACCAGTGCCCCAAGGGCAC+CGG 0.511909 2_4:+962983 Msa0307810:five_prime_UTR
ATAGAGAGTTGTTGATTGGT+TGG 0.512990 2_4:-967300 Msa0307820:intron
ACAGATAGTGGATGTAGTCC+TGG 0.513125 2_4:-963783 Msa0307820:three_prime_UTR
CCAATGCATCAAGCTCTTCA+GGG 0.513355 2_4:-963614 Msa0307820:three_prime_UTR
TCGGCGTTGGTGATGATGGT+AGG 0.514213 2_4:+968114 None:intergenic
TTCTACCACGATCCTCCGAT+GGG 0.514763 2_4:+963364 Msa0307810:CDS
TATAATAATCAATGAATGGA+AGG 0.514935 2_4:+968518 None:intergenic
TTGCCTGATGATGATTCTGA+GGG 0.515307 2_4:+965545 None:intergenic
AACAGTCATAATCAAATGCA+AGG 0.515465 2_4:+963753 Msa0307810:CDS
CTGTGAAGAGGTTCATTGGT+AGG 0.515676 2_4:-967981 Msa0307820:CDS
ATATTGAGACCACTCTTACA+AGG 0.516752 2_4:-967007 Msa0307820:CDS
CCCTGAAGAGCTTGATGCAT+TGG 0.518000 2_4:+963614 Msa0307810:CDS
AAATTCCGCCGTCGCCGCCA+TGG 0.519355 2_4:-968148 Msa0307820:exon
TGGTAATTTGTATAGCAGAT+TGG 0.520111 2_4:+965064 None:intergenic
TATTATAAGTTGAATTGAGA+GGG 0.522345 2_4:+963088 Msa0307810:five_prime_UTR
CATTCACGCTCGAGGAACTC+TGG 0.522954 2_4:-965010 Msa0307820:three_prime_UTR
TCTGGTTTCTCCAGATGGTG+TGG 0.523229 2_4:-964969 Msa0307820:three_prime_UTR
TTCATAACTGCCACAGCAGA+TGG 0.523408 2_4:-967038 Msa0307820:CDS
CAAGCTCTTCAGGGATCACC+TGG 0.525156 2_4:-963605 Msa0307820:three_prime_UTR
GAGCTTGTAAAGAAGATGAC+TGG 0.527440 2_4:-966672 Msa0307820:CDS
TTTGCATCAGTTAAAGGGTA+GGG 0.528704 2_4:+963962 Msa0307810:CDS
CATTCATTACTGGATTGCAT+TGG 0.528871 2_4:-962588 Msa0307820:three_prime_UTR
ACAAATTACCATTAGCGAGC+CGG 0.528978 2_4:-965052 Msa0307820:three_prime_UTR
GGGGAATGCGGCGCGAGGGA+AGG 0.529489 2_4:+968248 None:intergenic
AATCATTTGTAGAATCATGC+AGG 0.530033 2_4:+965209 None:intergenic
TTATGACTGTTGACCAAAAG+TGG 0.530097 2_4:-963741 Msa0307820:three_prime_UTR
GAACCTCTTCACAGAGAAGA+AGG 0.530342 2_4:+967990 None:intergenic
AATCAGGAAGTTATGCAGCT+TGG 0.532389 2_4:-965638 Msa0307820:CDS
GGAGACTTCAAGAGAGATGA+AGG 0.532940 2_4:-967275 Msa0307820:CDS
GGGTGAGAGAGAATTTGTTA+GGG 0.534415 2_4:-966230 Msa0307820:CDS
GAATCGTCCGCACAAGCCCC+AGG 0.535942 2_4:+963850 Msa0307810:CDS
CTTGGTAGCTTCCGCTTGGA+CGG 0.536040 2_4:-966196 Msa0307820:CDS
TGATATACAGGTTGAGAGGA+TGG 0.536379 2_4:-965888 Msa0307820:intron
GTATAAAGGATTGTCACGAC+TGG 0.536603 2_4:-965154 Msa0307820:three_prime_UTR
GGATCTGAAGCACATGATTG+AGG 0.537025 2_4:+963656 Msa0307810:CDS
TGATGCAAACCGTGGTGGAA+GGG 0.537165 2_4:-963948 Msa0307820:three_prime_UTR
GGAAATGCTAACCGGTGCCC+CGG 0.537524 2_4:+962831 Msa0307810:five_prime_UTR
GACCCTAATAATAAATATGA+GGG 0.539048 2_4:+963013 Msa0307810:five_prime_UTR
GAGCTAGGAGAAAAGGTACC+TGG 0.540979 2_4:-965758 Msa0307820:CDS
AATTAGACCTGGGGCTTGTG+CGG 0.541882 2_4:-963857 Msa0307820:three_prime_UTR
CTGCATCTGCAGCTCCAGGT+TGG 0.542960 2_4:+965600 None:intergenic
TTGGGTTTGGAAACTCTAGG+TGG 0.543344 2_4:-966361 Msa0307820:CDS
AATACAGGTATTATTGTGGA+TGG 0.545289 2_4:-965310 Msa0307820:three_prime_UTR
AAATTTAGCCCTTGTAAGAG+TGG 0.545733 2_4:+966998 None:intergenic
CTGATGCAAACCGTGGTGGA+AGG 0.545943 2_4:-963949 Msa0307820:three_prime_UTR
GGTGCCCCGGACACTAGTTA+AGG 0.546047 2_4:+962844 Msa0307810:five_prime_UTR
GTCAGTTGCTGCCATAGACA+AGG 0.546283 2_4:-966104 Msa0307820:CDS
CTTAAAGATGCTATTTCTGG+TGG 0.546395 2_4:-965698 Msa0307820:CDS
ATTGCCGGTTGGCGAGAGGA+TGG 0.546447 2_4:-968671 None:intergenic
TTCCTGATTGAGGGCAGCCA+TGG 0.546693 2_4:+965652 None:intergenic
TTTAGCTTTCTCAGCTGTCT+CGG 0.547108 2_4:+967211 None:intergenic
ATTAGATCAGATCATAGGAA+TGG 0.549160 2_4:-963189 Msa0307820:three_prime_UTR
TCTTTGCAGTTATGGTGGAA+AGG 0.551046 2_4:+963341 Msa0307810:CDS
ACCAGTAGAAAATTCATTGA+GGG 0.551286 2_4:-966769 Msa0307820:CDS
TATTGAGACCACTCTTACAA+GGG 0.551559 2_4:-967006 Msa0307820:CDS
GGTAGACAACAGAGTCCGCC+TGG 0.552888 2_4:+965801 None:intergenic
GTTTGCATCAGTTAAAGGGT+AGG 0.553013 2_4:+963961 Msa0307810:CDS
ACTGGATTGCATTGGATGGA+TGG 0.553522 2_4:-962580 Msa0307820:three_prime_UTR
AGTGATTGTAAAGCATAGGT+TGG 0.553672 2_4:+962531 Msa0307810:five_prime_UTR
GAGAAGCAATTGAAAGAGCT+AGG 0.553890 2_4:-965773 Msa0307820:CDS
AGATGAAGTGGTTGCCCTTG+GGG 0.554418 2_4:-966622 Msa0307820:CDS
ACAACAACAACAACTACCAA+TGG 0.556294 2_4:+968464 None:intergenic
GAGTGGCATGGTTGATGGAG+AGG 0.556435 2_4:+963569 Msa0307810:CDS
CTCAGAATCATCATCAGGCA+AGG 0.557364 2_4:-965543 Msa0307820:CDS
TTGACCAAAAGTGGCTTCGA+AGG 0.557537 2_4:-963732 Msa0307820:three_prime_UTR
TCCGCCGTCGCCGCCATGGA+AGG 0.557762 2_4:-968144 Msa0307820:exon
TGGTTAAGCATACCATAAAA+GGG 0.558920 2_4:-962965 Msa0307820:three_prime_UTR
ACCTGGCCCTGTGAAAGAAA+AGG 0.559548 2_4:-965741 Msa0307820:CDS
CCGGAGACGGTGACGTCGCG+AGG 0.560078 2_4:-963429 Msa0307820:intron
GCGTGGTGCAAAATTAGACC+TGG 0.562059 2_4:-963868 Msa0307820:three_prime_UTR
GGTCCTCAAGTATGTGGGCG+GGG 0.562272 2_4:+963386 Msa0307810:CDS
ACACCTTCTTCTCTGTGAAG+AGG 0.562706 2_4:-967993 Msa0307820:CDS
GTTCTACCACGATCCTCCGA+TGG 0.563446 2_4:+963363 Msa0307810:CDS
AAGGACATTAATTTCTACAC+TGG 0.563521 2_4:+966255 None:intergenic
AAATTTCTTTGCAGTTATGG+TGG 0.564870 2_4:+963336 Msa0307810:CDS
CAAAGGAGGACAAGGAGAAG+AGG 0.565066 2_4:-965844 Msa0307820:CDS
CAGCAGCAGCAGCATGATCA+TGG 0.566973 2_4:+964071 Msa0307810:CDS
CACCAGTAGAAAATTCATTG+AGG 0.566996 2_4:-966770 Msa0307820:CDS
ACCCCTCAAAAGTGTAACAA+TGG 0.567398 2_4:-963249 Msa0307820:three_prime_UTR
ATGCTTAACCAGTGCCCCAA+GGG 0.568341 2_4:+962977 Msa0307810:five_prime_UTR
AAAGGAGGACAAGGAGAAGA+GGG 0.570032 2_4:-965843 Msa0307820:CDS
CTCATCACTAGGCAAGGTAC+TGG 0.570673 2_4:+966045 None:intergenic
CTTCAATCTGCGGAACCCCA+CGG 0.570947 2_4:+966158 None:intergenic
GCCGTCGCCGCCATGGAAGG+TGG 0.571675 2_4:-968141 Msa0307820:exon
GACCTGAACTGCAGCCCCAA+GGG 0.573604 2_4:+966608 None:intergenic
GGGTTTCATCTATCTAAACA+TGG 0.575208 2_4:-968396 Msa0307820:five_prime_UTR
AGAGGTGGTGTTAAAGTACC+AGG 0.575535 2_4:+963587 Msa0307810:CDS
AGGGCAGAGTTATTCATCAC+AGG 0.577182 2_4:+964915 None:intergenic
CAACTACCAATGGATAGAAG+TGG 0.577273 2_4:+968474 None:intergenic
GTAAGCAACAACGGAGGGAG+TGG 0.577943 2_4:+968080 None:intergenic
ATCAGGCAAGGGAGCAGATG+GGG 0.579068 2_4:-965531 Msa0307820:CDS
CGACCTGAACTGCAGCCCCA+AGG 0.579884 2_4:+966607 None:intergenic
ACTTTACCTAATGGTTGCAA+GGG 0.581568 2_4:+964896 None:intergenic
CAAATGCAAGGGCAACCACC+AGG 0.582712 2_4:+963765 Msa0307810:CDS
GGGGTCCTCAAGTATGTGGG+CGG 0.582949 2_4:+963384 Msa0307810:CDS
CACTGTCAATCCAGATGAAG+TGG 0.585751 2_4:-966634 Msa0307820:CDS
GGAACCCCACGGGGAGCAGG+AGG 0.586360 2_4:+966169 None:intergenic
CAGTCTCTATATAACCAACC+TGG 0.588475 2_4:-965614 Msa0307820:CDS
TTCGGATTGGGGAGAAACCA+AGG 0.588752 2_4:+968345 None:intergenic
GTGAAATACAGGTATTATTG+TGG 0.588804 2_4:-965314 Msa0307820:three_prime_UTR
CCTGATGTTTGTTTGAGTGA+GGG 0.590087 2_4:+967175 None:intergenic
TGGCATGGTTGATGGAGAGG+TGG 0.590317 2_4:+963572 Msa0307810:CDS
CGTGGTGCAAAATTAGACCT+GGG 0.591631 2_4:-963867 Msa0307820:three_prime_UTR
CATCAGGCAAGGGAGCAGAT+GGG 0.592026 2_4:-965532 Msa0307820:CDS
GAAGGTGAAAGGCTTTCTGT+TGG 0.592432 2_4:+968215 None:intergenic
CCAAACTATTAAAGATGCCA+TGG 0.593171 2_4:-965669 Msa0307820:CDS
ACCTAGAGTTTCCAAACCCA+AGG 0.594061 2_4:+966363 None:intergenic
TTATTATAAGTTGAATTGAG+AGG 0.594510 2_4:+963087 Msa0307810:five_prime_UTR
TCTGAGTGATTGTAAAGCAT+AGG 0.596970 2_4:+962527 Msa0307810:five_prime_UTR
TTGACGACACGGAAGGTGAA+AGG 0.597140 2_4:+968204 None:intergenic
CAGTACCTTGCCTAGTGATG+AGG 0.597471 2_4:-966044 Msa0307820:intron
CTCAATTAAGGATATTGATG+AGG 0.598604 2_4:-966736 Msa0307820:CDS
GGTGTCCGTTAGAACAAATG+AGG 0.598833 2_4:+963635 Msa0307810:CDS
AATAATAGATGGAGAAAACA+GGG 0.600370 2_4:+963289 Msa0307810:exon
GGTACGCTGACCTTCGGCGT+TGG 0.600932 2_4:+968101 None:intergenic
GGTATTCCTCCTGCTCCCCG+TGG 0.601224 2_4:-966175 Msa0307820:CDS
TCCTTGGGTTTGGAAACTCT+AGG 0.601698 2_4:-966364 Msa0307820:CDS
ACCTGATGTTTGTTTGAGTG+AGG 0.601734 2_4:+967174 None:intergenic
CTGCCATAGACAAGGGCACA+GGG 0.603731 2_4:-966096 Msa0307820:CDS
CAAATTCTCTCTCACCCTGA+AGG 0.606133 2_4:+966236 None:intergenic
TTTGGATTCCAAAAGAGGCA+TGG 0.606256 2_4:-962611 Msa0307820:three_prime_UTR
TGCAATAGACACAAAGAACC+AGG 0.606261 2_4:-965819 Msa0307820:CDS
GTTTCCAAACCCAAGGACAA+TGG 0.606610 2_4:+966370 None:intergenic
ATATACCTCATCACTAGGCA+AGG 0.607252 2_4:+966039 None:intergenic
AATTTGGGGAATGCGGCGCG+AGG 0.608723 2_4:+968243 None:intergenic
GGGTTTGGAAACTCTAGGTG+GGG 0.609313 2_4:-966359 Msa0307820:CDS
GGTGGATAATTTGGGGAATG+CGG 0.609380 2_4:+968236 None:intergenic
GGTTTGTCCATCAGCAGCGG+TGG 0.609839 2_4:+966276 None:intergenic
GATGGGGTCCTCAAGTATGT+GGG 0.610469 2_4:+963381 Msa0307810:CDS
GTTGTTGCTTACACCAAGAA+CGG 0.610720 2_4:-968069 Msa0307820:CDS
ACAAATTGCCGGTTGGCGAG+AGG 0.610733 2_4:-968675 None:intergenic
ATGTTTGGGGCCATCTGCTG+TGG 0.611510 2_4:+967028 None:intergenic
AGAGTCATTAGAGACGATAA+CGG 0.614625 2_4:-967916 Msa0307820:CDS
TGGCGTGATTAGAATTGAGA+CGG 0.614990 2_4:+968271 None:intergenic
TGTGCATTCAATTTGGTTAG+GGG 0.617125 2_4:+963057 Msa0307810:five_prime_UTR
AGAAGATATACCTCATCACT+AGG 0.617745 2_4:+966034 None:intergenic
ACCATCATCACCAACGCCGA+AGG 0.617924 2_4:-968111 Msa0307820:CDS
CCTTCCCACCTCAAAATCAG+AGG 0.618118 2_4:-966305 Msa0307820:CDS
GACTCGCTACCAGGTGGTGT+AGG 0.618229 2_4:+965572 None:intergenic
TTTCTCATTGACGACACGGA+AGG 0.618619 2_4:+968197 None:intergenic
TCTGCTGTGGCAGTTATGAA+CGG 0.623015 2_4:+967041 None:intergenic
ACATGATTGAGGAACATGAT+CGG 0.627684 2_4:+963667 Msa0307810:CDS
GCTGCCATAGACAAGGGCAC+AGG 0.627845 2_4:-966097 Msa0307820:CDS
TGGCCCTGTGAAAGAAAAGG+TGG 0.629625 2_4:-965738 Msa0307820:CDS
TGGATGATATACAGGTTGAG+AGG 0.629889 2_4:-965892 Msa0307820:intron
GCAGCAGGACCTACACCACC+TGG 0.631841 2_4:-965581 Msa0307820:CDS
CACATACTTGAGGACCCCAT+CGG 0.633311 2_4:-963379 Msa0307820:three_prime_UTR
ATTTGGGGAATGCGGCGCGA+GGG 0.634265 2_4:+968244 None:intergenic
TATGCTTAACCAGTGCCCCA+AGG 0.634418 2_4:+962976 Msa0307810:five_prime_UTR
TTGGTGTAAGCAACAACGGA+GGG 0.635190 2_4:+968075 None:intergenic
ACCCTAATAATAAATATGAG+GGG 0.636839 2_4:+963014 Msa0307810:five_prime_UTR
TCAAGTGCTGCCCAAATACA+CGG 0.637196 2_4:-968368 Msa0307820:five_prime_UTR
TCTCCCCGCCCACATACTTG+AGG 0.638523 2_4:-963389 Msa0307820:three_prime_UTR
CCCTAATAATAAATATGAGG+GGG 0.640858 2_4:+963015 Msa0307810:five_prime_UTR
TCAGAATCATCATCAGGCAA+GGG 0.642669 2_4:-965542 Msa0307820:CDS
CAACTTTCTCATTGACGACA+CGG 0.643110 2_4:+968193 None:intergenic
CATTGGTAGGAAGATGTCTG+AGG 0.643809 2_4:-967968 Msa0307820:CDS
AGGACCCCATCGGAGGATCG+TGG 0.644063 2_4:-963369 Msa0307820:three_prime_UTR
TTAACTGATGCAAACCGTGG+TGG 0.644479 2_4:-963953 Msa0307820:three_prime_UTR
TATTCCTCCTGCTCCCCGTG+GGG 0.646272 2_4:-966173 Msa0307820:CDS
TCGAACTTCACTTCAATCTG+CGG 0.646442 2_4:+966148 None:intergenic
GGTTGAGAGGATGGTCAATG+AGG 0.648062 2_4:-965879 Msa0307820:CDS
CGGAGACGGTGACGTCGCGA+GGG 0.648226 2_4:-963428 Msa0307820:three_prime_UTR
AAAGTAATGTTGTGTCTGTG+TGG 0.653123 2_4:+962742 Msa0307810:five_prime_UTR
CATGATCGGCATGAGACCGG+AGG 0.658608 2_4:+963681 Msa0307810:CDS
GCTTGATTGGACGACGGTGT+AGG 0.660624 2_4:-965132 Msa0307820:three_prime_UTR
GTTCTTGGTGTAAGCAACAA+CGG 0.661153 2_4:+968071 None:intergenic
AGGTTTGCCACCTTCCATGG+CGG 0.661820 2_4:+968134 None:intergenic
ACAGTCATAATCAAATGCAA+GGG 0.665151 2_4:+963754 Msa0307810:CDS
ATACTTGAGGACCCCATCGG+AGG 0.666215 2_4:-963376 Msa0307820:three_prime_UTR
ACTGGTTTGTCCATCAGCAG+CGG 0.667077 2_4:+966273 None:intergenic
GAGTGGTCTCAATATGTTTG+GGG 0.667521 2_4:+967015 None:intergenic
TCAGTTGCTGCCATAGACAA+GGG 0.668838 2_4:-966103 Msa0307820:CDS
AATTAACACAGACACGACAA+AGG 0.670561 2_4:+962493 Msa0307810:five_prime_UTR
TTACAAGCTCCTGAACAGCA+GGG 0.671122 2_4:+966685 None:intergenic
AAATCACTACCAATTTAGCA+CGG 0.675626 2_4:+965428 None:intergenic
TCAATCTGCGGAACCCCACG+GGG 0.676124 2_4:+966160 None:intergenic
ATATCCTTAACTAGTGTCCG+GGG 0.679191 2_4:-962848 Msa0307820:three_prime_UTR
GGGCCAGACTCGCTACCAGG+TGG 0.679501 2_4:+965566 None:intergenic
GTGGTGCAAAATTAGACCTG+GGG 0.682694 2_4:-963866 Msa0307820:three_prime_UTR
CAGGAGGAATACCGTCCAAG+CGG 0.683864 2_4:+966185 None:intergenic
GACAATCACCACCCCAACAG+CGG 0.686594 2_4:+964048 Msa0307810:CDS
GGTGAAGAACATGCAGAGCG+TGG 0.689038 2_4:-963885 Msa0307820:three_prime_UTR
AAGAACGGCGACAGACTCGT+CGG 0.694498 2_4:-968054 Msa0307820:CDS
CCTTTAACTGATGCAAACCG+TGG 0.695081 2_4:-963956 Msa0307820:three_prime_UTR
TGTGTTCGTATGCTTATCTG+GGG 0.695498 2_4:-963919 Msa0307820:three_prime_UTR
TGCCTGATGATGATTCTGAG+GGG 0.696479 2_4:+965546 None:intergenic
TCTACCACGATCCTCCGATG+GGG 0.698881 2_4:+963365 Msa0307810:CDS
CTTGGTGTAAGCAACAACGG+AGG 0.704805 2_4:+968074 None:intergenic
ACAGACTCGCCCTTCCACCA+CGG 0.708254 2_4:+963939 Msa0307810:CDS
GGAGAAACCAGAATACCAAG+AGG 0.716721 2_4:+964980 None:intergenic
CGACTGGCTTGATTGGACGA+CGG 0.719837 2_4:-965138 Msa0307820:three_prime_UTR
GGTGTTCTCGGGATTAACGA+CGG 0.722290 2_4:+968011 None:intergenic
GAAACCCTAACCCTAATTTG+GGG 0.725965 2_4:+968412 None:intergenic
ATAATAGATGGAGAAAACAG+GGG 0.729240 2_4:+963290 Msa0307810:exon
GATAGTGGATGTAGTCCTGG+TGG 0.746904 2_4:-963780 Msa0307820:three_prime_UTR
AATAGACACAAAGAACCAGG+CGG 0.795319 2_4:-965816 Msa0307820:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATAATATAATATAATAT+AGG - chr2_4:963360-963379 Msa0307820:three_prime_UTR 0.0%
!! ATAATATAATAATCAATGAA+TGG + chr2_4:962603-962622 Msa0307810:five_prime_UTR 10.0%
!! TTTGTAATATTAGATAAATT+GGG - chr2_4:967103-967122 Msa0307820:intron 10.0%
!! AAACAAATAATAATAATAGA+TGG + chr2_4:967839-967858 None:intergenic 10.0%
!! TATTATTATTCTATGTTCTT+AGG - chr2_4:963306-963325 Msa0307820:three_prime_UTR 15.0%
!! AGTTATAGAGATTATTTAAT+AGG - chr2_4:965640-965659 Msa0307820:CDS 15.0%
!!! TATAATTAGACTTTTCTTAT+AGG - chr2_4:965735-965754 Msa0307820:CDS 15.0%
!! GTACATAAATTTAAACAAAA+GGG + chr2_4:966676-966695 None:intergenic 15.0%
!! AGTACATAAATTTAAACAAA+AGG + chr2_4:966677-966696 None:intergenic 15.0%
!! ATATTCATATTCATATTCAT+TGG - chr2_4:966914-966933 Msa0307820:intron 15.0%
!! GTTTGTAATATTAGATAAAT+TGG - chr2_4:967102-967121 Msa0307820:intron 15.0%
!!! AGAAATTTTACTTTATTCTT+TGG - chr2_4:967793-967812 Msa0307820:intron 15.0%
!! TTACCTACTAAATAAAATAA+GGG + chr2_4:968307-968326 None:intergenic 15.0%
!! ATTACCTACTAAATAAAATA+AGG + chr2_4:968308-968327 None:intergenic 15.0%
!!! TTACTTTTTTTTTTTAGCAA+AGG - chr2_4:968388-968407 Msa0307820:five_prime_UTR 15.0%
!! TTACTATTACTATTAAGTTA+AGG - chr2_4:968451-968470 Msa0307820:five_prime_UTR 15.0%
!! TATAATAATCAATGAATGGA+AGG + chr2_4:962599-962618 Msa0307810:five_prime_UTR 20.0%
!! ATAATATAATATAGGTCTTG+AGG - chr2_4:963368-963387 Msa0307820:three_prime_UTR 20.0%
!! TTTGAATGATAAAGTAACTA+AGG - chr2_4:963417-963436 Msa0307820:three_prime_UTR 20.0%
!!! ACTTGCTATATAATAAAGTA+AGG + chr2_4:963733-963752 Msa0307810:CDS 20.0%
!! TATAGTCAACATACAAAAAT+AGG + chr2_4:963797-963816 Msa0307810:CDS 20.0%
!!! GTGTATTTTTTGATTGATTT+AGG - chr2_4:964671-964690 Msa0307820:intron 20.0%
!!! TATTTTTTTTCTTCCAAACT+AGG + chr2_4:966607-966626 None:intergenic 20.0%
!! TATTAATTACTATTACTCCA+CGG + chr2_4:966867-966886 None:intergenic 20.0%
!! GAGAAATGCTAATAATAAAT+AGG + chr2_4:967995-968014 None:intergenic 20.0%
!!! TATTATAAGTTGAATTGAGA+GGG + chr2_4:968029-968048 None:intergenic 20.0%
!!! TTATTATAAGTTGAATTGAG+AGG + chr2_4:968030-968049 None:intergenic 20.0%
!!! TCAAAAACAATTTCCTTTTA+TGG + chr2_4:968183-968202 None:intergenic 20.0%
!!! TTTCCCTTATTTTATTTAGT+AGG - chr2_4:968301-968320 Msa0307820:five_prime_UTR 20.0%
!!! AAATGAAAAGGGTTTTGTTT+TGG + chr2_4:962576-962595 Msa0307810:five_prime_UTR 25.0%
!! GAAAAACAATGAAACCATTT+TGG - chr2_4:963576-963595 Msa0307820:three_prime_UTR 25.0%
!! TAATTTGTACAAAGCTTGAA+AGG + chr2_4:964019-964038 Msa0307810:CDS 25.0%
! TTCAGTGTAACTTATCAAAA+TGG + chr2_4:964583-964602 None:intergenic 25.0%
! TCAATCAAAAAATACACATG+AGG + chr2_4:964668-964687 None:intergenic 25.0%
!!! ATTTTTTGATTGATTTAGGC+TGG - chr2_4:964675-964694 Msa0307820:intron 25.0%
! CAAGAGATAATTATAAACAC+CGG + chr2_4:965204-965223 None:intergenic 25.0%
!! AAATTTTGTCTGTGAAATAC+AGG - chr2_4:965789-965808 Msa0307820:CDS 25.0%
! AATGATGCAACTTTGTATAA+AGG - chr2_4:965946-965965 Msa0307820:intron 25.0%
! ATTAAAACAGAATAACGAGA+GGG + chr2_4:966249-966268 None:intergenic 25.0%
! TATTAAAACAGAATAACGAG+AGG + chr2_4:966250-966269 None:intergenic 25.0%
! CAATATAACACTTATAGACA+AGG + chr2_4:966329-966348 None:intergenic 25.0%
! GTCTATAAGTGTTATATTGT+TGG - chr2_4:966330-966349 Msa0307820:CDS 25.0%
! TGATTACAGATTAAGAAACT+GGG + chr2_4:966579-966598 None:intergenic 25.0%
!!! TAATTAGTTTGTTGTGAGAA+GGG - chr2_4:966713-966732 Msa0307820:CDS 25.0%
! GTTATCAGATATGATGAAAA+AGG + chr2_4:967572-967591 None:intergenic 25.0%
! GAATAGAAAATGAATGTTAC+CGG - chr2_4:967666-967685 Msa0307820:intron 25.0%
! GTAAAATTTCTTTGCAGTTA+TGG + chr2_4:967784-967803 None:intergenic 25.0%
! AATAATAGATGGAGAAAACA+GGG + chr2_4:967828-967847 None:intergenic 25.0%
! TAATAATAGATGGAGAAAAC+AGG + chr2_4:967829-967848 None:intergenic 25.0%
! ACCCTAATAATAAATATGAG+GGG + chr2_4:968103-968122 None:intergenic 25.0%
! GACCCTAATAATAAATATGA+GGG + chr2_4:968104-968123 None:intergenic 25.0%
!! ATGGTAATAATTCCCTTTTA+TGG + chr2_4:968164-968183 None:intergenic 25.0%
! AAGGGAATTATTACCATAAA+AGG - chr2_4:968167-968186 Msa0307820:five_prime_UTR 25.0%
! ACTAGTTAAGGATATGAAAA+AGG + chr2_4:968261-968280 None:intergenic 25.0%
! TTTAGTAATAGTTTCCTCTT+TGG - chr2_4:968485-968504 Msa0307820:five_prime_UTR 25.0%
ACCGTAGATTAGAAATGAAA+CGG - chr2_4:962477-962496 Msa0307820:three_prime_UTR 30.0%
TGAATGGAAGGAAATGAAAA+GGG + chr2_4:962587-962606 Msa0307810:five_prime_UTR 30.0%
ATGAATGGAAGGAAATGAAA+AGG + chr2_4:962588-962607 Msa0307810:five_prime_UTR 30.0%
! AAGAAGAAGAAGAAGGTTTT+CGG + chr2_4:962790-962809 Msa0307810:five_prime_UTR 30.0%
! AATTCCAAAACCCTTTTCTT+CGG - chr2_4:962817-962836 Msa0307820:three_prime_UTR 30.0%
! TTTCTGTTGGTGGATAATTT+GGG + chr2_4:962889-962908 Msa0307810:five_prime_UTR 30.0%
CATACTTCAATGATTCACAA+AGG - chr2_4:963458-963477 Msa0307820:intron 30.0%
ATAAAGTAAGGAAGAAGAAG+TGG + chr2_4:963721-963740 Msa0307810:CDS 30.0%
TTAGAGGGTAACAAAAGATT+TGG + chr2_4:964185-964204 Msa0307810:CDS 30.0%
ACCAGTAGAAAATTCATTGA+GGG - chr2_4:964345-964364 Msa0307820:intron 30.0%
CTCAATTAAGGATATTGATG+AGG - chr2_4:964378-964397 Msa0307820:intron 30.0%
TTTGATAAGTTACACTGAAG+TGG - chr2_4:964584-964603 Msa0307820:intron 30.0%
TTGATAAGTTACACTGAAGT+GGG - chr2_4:964585-964604 Msa0307820:intron 30.0%
AAGGACATTAATTTCTACAC+TGG + chr2_4:964862-964881 None:intergenic 30.0%
TGTAGAAATTAATGTCCTTC+AGG - chr2_4:964863-964882 Msa0307820:intron 30.0%
GTAGAAATTAATGTCCTTCA+GGG - chr2_4:964864-964883 Msa0307820:intron 30.0%
AAACAGGATATTACCATTAC+TGG - chr2_4:965044-965063 Msa0307820:three_prime_UTR 30.0%
CGGTGTTTATAATTATCTCT+TGG - chr2_4:965202-965221 Msa0307820:three_prime_UTR 30.0%
TTATCTCTTGGATGATATAC+AGG - chr2_4:965214-965233 Msa0307820:three_prime_UTR 30.0%
CATGGCATCTTTAATAGTTT+GGG + chr2_4:965447-965466 None:intergenic 30.0%
AAATCACTACCAATTTAGCA+CGG + chr2_4:965689-965708 None:intergenic 30.0%
!!! TTGGTAGTGATTTTTGTCAA+TGG - chr2_4:965696-965715 Msa0307820:CDS 30.0%
GTGAAATACAGGTATTATTG+TGG - chr2_4:965800-965819 Msa0307820:CDS 30.0%
AATACAGGTATTATTGTGGA+TGG - chr2_4:965804-965823 Msa0307820:CDS 30.0%
AATCATTTGTAGAATCATGC+AGG + chr2_4:965908-965927 None:intergenic 30.0%
TGCTTAGAGCAAACTAAAAA+TGG + chr2_4:966030-966049 None:intergenic 30.0%
! TGGTAATTTGTATAGCAGAT+TGG + chr2_4:966053-966072 None:intergenic 30.0%
TTAAAAAGAAGACTGCTTTC+CGG + chr2_4:966084-966103 None:intergenic 30.0%
AGGGAAAATACTTTACCTAA+TGG + chr2_4:966230-966249 None:intergenic 30.0%
GTGATTACAGATTAAGAAAC+TGG + chr2_4:966580-966599 None:intergenic 30.0%
TGTAATCACAATACCTAGTT+TGG - chr2_4:966591-966610 Msa0307820:intron 30.0%
!! GTAATTAGTTTGTTGTGAGA+AGG - chr2_4:966712-966731 Msa0307820:CDS 30.0%
TTTATCCCTTGTTCTTGTAT+GGG - chr2_4:966971-966990 Msa0307820:CDS 30.0%
TAGCGTTTCTCTAACAAATA+TGG - chr2_4:967304-967323 Msa0307820:intron 30.0%
AAATATGGTTCAACAGATAG+TGG - chr2_4:967319-967338 Msa0307820:intron 30.0%
ACAGTCATAATCAAATGCAA+GGG + chr2_4:967363-967382 None:intergenic 30.0%
AACAGTCATAATCAAATGCA+AGG + chr2_4:967364-967383 None:intergenic 30.0%
AATAAAAATGCACGAAGCAA+TGG - chr2_4:967406-967425 Msa0307820:intron 30.0%
ATAAAAATGCACGAAGCAAT+GGG - chr2_4:967407-967426 Msa0307820:intron 30.0%
TGAGTTTGATAGAGAAAGAA+AGG - chr2_4:967644-967663 Msa0307820:intron 30.0%
AAATTTCTTTGCAGTTATGG+TGG + chr2_4:967781-967800 None:intergenic 30.0%
ATAATAGATGGAGAAAACAG+GGG + chr2_4:967827-967846 None:intergenic 30.0%
! TAACAATGGAGAGTGATTTT+GGG - chr2_4:967879-967898 Msa0307820:CDS 30.0%
!!! TGATTTTGGGATCAAAGTAA+AGG - chr2_4:967892-967911 Msa0307820:CDS 30.0%
GATAGATTAGATCAGATCAT+AGG - chr2_4:967920-967939 Msa0307820:CDS 30.0%
ATTAGATCAGATCATAGGAA+TGG - chr2_4:967925-967944 Msa0307820:CDS 30.0%
ATGTGCATTCAATTTGGTTA+GGG + chr2_4:968061-968080 None:intergenic 30.0%
AATGTGCATTCAATTTGGTT+AGG + chr2_4:968062-968081 None:intergenic 30.0%
TCCCCCTCATATTTATTATT+AGG - chr2_4:968098-968117 Msa0307820:CDS 30.0%
CCCTAATAATAAATATGAGG+GGG + chr2_4:968102-968121 None:intergenic 30.0%
CCCCCTCATATTTATTATTA+GGG - chr2_4:968099-968118 Msa0307820:CDS 30.0%
GGACCCTAATAATAAATATG+AGG + chr2_4:968105-968124 None:intergenic 30.0%
TGGTTAAGCATACCATAAAA+GGG - chr2_4:968149-968168 Msa0307820:exon 30.0%
AAAATAAGGGAAATGCTAAC+CGG + chr2_4:968294-968313 None:intergenic 30.0%
CCCGTTTCATTTCTAATCTA+CGG + chr2_4:962481-962500 Msa0307810:five_prime_UTR 35.0%
CCGTAGATTAGAAATGAAAC+GGG - chr2_4:962478-962497 Msa0307820:three_prime_UTR 35.0%
ACAACAACAACAACTACCAA+TGG + chr2_4:962653-962672 Msa0307810:five_prime_UTR 35.0%
TAATTTGGGGAGTTGTTTGA+AGG + chr2_4:962692-962711 Msa0307810:five_prime_UTR 35.0%
TTCAAACAACTCCCCAAATT+AGG - chr2_4:962691-962710 Msa0307820:three_prime_UTR 35.0%
TCAAACAACTCCCCAAATTA+GGG - chr2_4:962692-962711 Msa0307820:three_prime_UTR 35.0%
TGAAACCCTAACCCTAATTT+GGG + chr2_4:962706-962725 Msa0307810:five_prime_UTR 35.0%
ATGAAACCCTAACCCTAATT+TGG + chr2_4:962707-962726 Msa0307810:five_prime_UTR 35.0%
GGGTTTCATCTATCTAAACA+TGG - chr2_4:962718-962737 Msa0307820:three_prime_UTR 35.0%
! AAGAAGAAGGTTTTCGGATT+GGG + chr2_4:962784-962803 Msa0307810:five_prime_UTR 35.0%
GAAGAAGAAGAAGAAGAAGA+AGG + chr2_4:962797-962816 Msa0307810:five_prime_UTR 35.0%
! TTCTGTTGGTGGATAATTTG+GGG + chr2_4:962888-962907 Msa0307810:five_prime_UTR 35.0%
! CTTTCTGTTGGTGGATAATT+TGG + chr2_4:962890-962909 Msa0307810:five_prime_UTR 35.0%
!! AAAGTTGTCGGTATCGATTT+GGG - chr2_4:962937-962956 Msa0307820:three_prime_UTR 35.0%
AGAGTCATTAGAGACGATAA+CGG - chr2_4:963198-963217 Msa0307820:three_prime_UTR 35.0%
! GCAAATGATTTTCCAATAGC+TGG + chr2_4:963243-963262 Msa0307810:five_prime_UTR 35.0%
TGTGAATCATTGAAGTATGC+AGG + chr2_4:963457-963476 Msa0307810:intron 35.0%
GACTATAGAGAGTTGTTGAT+TGG - chr2_4:963810-963829 Msa0307820:three_prime_UTR 35.0%
! ATAGAGAGTTGTTGATTGGT+TGG - chr2_4:963814-963833 Msa0307820:three_prime_UTR 35.0%
!! TGAAGGTATAGACCTTTTGA+AGG - chr2_4:963856-963875 Msa0307820:three_prime_UTR 35.0%
ATCAGGTATTTGCTTTCTCA+TGG - chr2_4:963956-963975 Msa0307820:three_prime_UTR 35.0%
TAGCAGAAGTGGTTAAAGAT+TGG + chr2_4:963983-964002 Msa0307810:CDS 35.0%
AACTCATAAACTAGCAGAAG+TGG + chr2_4:963994-964013 Msa0307810:CDS 35.0%
AGAGTGGTCTCAATATGTTT+GGG + chr2_4:964103-964122 Msa0307810:CDS 35.0%
AAGAGTGGTCTCAATATGTT+TGG + chr2_4:964104-964123 Msa0307810:CDS 35.0%
ATATTGAGACCACTCTTACA+AGG - chr2_4:964107-964126 Msa0307820:three_prime_UTR 35.0%
TATTGAGACCACTCTTACAA+GGG - chr2_4:964108-964127 Msa0307820:three_prime_UTR 35.0%
AAATTTAGCCCTTGTAAGAG+TGG + chr2_4:964119-964138 Msa0307810:CDS 35.0%
TCTTACAAGGGCTAAATTTG+AGG - chr2_4:964120-964139 Msa0307820:intron 35.0%
TATGTTCAGATCTTCTTGAC+AGG - chr2_4:964146-964165 Msa0307820:intron 35.0%
GCAAGCAGTTCAAAATTAGA+GGG + chr2_4:964200-964219 Msa0307810:CDS 35.0%
AGCAAGCAGTTCAAAATTAG+AGG + chr2_4:964201-964220 Msa0307810:CDS 35.0%
GTGACATTCAATTCAACATC+AGG + chr2_4:964224-964243 Msa0307810:CDS 35.0%
! GCTTTTGCAATAAAGCTTCA+AGG + chr2_4:964282-964301 Msa0307810:CDS 35.0%
CACCAGTAGAAAATTCATTG+AGG - chr2_4:964344-964363 Msa0307820:intron 35.0%
! TCCCTCAATGAATTTTCTAC+TGG + chr2_4:964349-964368 Msa0307810:CDS 35.0%
GGATGCAAAACTCTCAATTA+AGG - chr2_4:964366-964385 Msa0307820:intron 35.0%
ATTGATGAGGTGATTCTTGT+TGG - chr2_4:964391-964410 Msa0307820:intron 35.0%
!!! AAAACCTCTGATTTTGAGGT+GGG + chr2_4:964816-964835 None:intergenic 35.0%
GTTAGGGACAATAAATCTCT+TGG - chr2_4:964900-964919 Msa0307820:intron 35.0%
AAGTTCGACATTGATGCAAA+TGG - chr2_4:964981-965000 Msa0307820:three_prime_UTR 35.0%
AGAAGATATACCTCATCACT+AGG + chr2_4:965083-965102 None:intergenic 35.0%
CTTTATCTGCTTACTACTTC+TGG - chr2_4:965137-965156 Msa0307820:three_prime_UTR 35.0%
ATTGAAAGAGCTAGGAGAAA+AGG - chr2_4:965349-965368 Msa0307820:three_prime_UTR 35.0%
!! GAGCTTAAAGATGCTATTTC+TGG - chr2_4:965413-965432 Msa0307820:three_prime_UTR 35.0%
!! CTTAAAGATGCTATTTCTGG+TGG - chr2_4:965416-965435 Msa0307820:three_prime_UTR 35.0%
CCATGGCATCTTTAATAGTT+TGG + chr2_4:965448-965467 None:intergenic 35.0%
CCAAACTATTAAAGATGCCA+TGG - chr2_4:965445-965464 Msa0307820:three_prime_UTR 35.0%
ATGCAGGTTCGTATCTTAAT+AGG + chr2_4:965892-965911 None:intergenic 35.0%
ACTTTACCTAATGGTTGCAA+GGG + chr2_4:966221-966240 None:intergenic 35.0%
TACTTTACCTAATGGTTGCA+AGG + chr2_4:966222-966241 None:intergenic 35.0%
AACAACCAATTCTCCAACAT+CGG - chr2_4:966530-966549 Msa0307820:intron 35.0%
TCATTCCCATATAGACATTC+TGG - chr2_4:966754-966773 Msa0307820:CDS 35.0%
CATTCCCATATAGACATTCT+GGG - chr2_4:966755-966774 Msa0307820:CDS 35.0%
AAGTCCCAGAATGTCTATAT+GGG + chr2_4:966762-966781 None:intergenic 35.0%
!! ATATAGACATTCTGGGACTT+CGG - chr2_4:966762-966781 Msa0307820:CDS 35.0%
AAGAACAAGGGATAAACATG+GGG + chr2_4:966967-966986 None:intergenic 35.0%
CAAGAACAAGGGATAAACAT+GGG + chr2_4:966968-966987 None:intergenic 35.0%
ACAAGAACAAGGGATAAACA+TGG + chr2_4:966969-966988 None:intergenic 35.0%
GTTTATCCCTTGTTCTTGTA+TGG - chr2_4:966970-966989 Msa0307820:CDS 35.0%
TGGTGATTGTCTATTGTTGT+TGG - chr2_4:967078-967097 Msa0307820:intron 35.0%
TTTGCATCAGTTAAAGGGTA+GGG + chr2_4:967155-967174 None:intergenic 35.0%
!! TTATCTGGGGAGATTGATTT+TGG - chr2_4:967208-967227 Msa0307820:CDS 35.0%
TTATGACTGTTGACCAAAAG+TGG - chr2_4:967373-967392 Msa0307820:intron 35.0%
TAAAAATGCACGAAGCAATG+GGG - chr2_4:967408-967427 Msa0307820:intron 35.0%
ACATGATTGAGGAACATGAT+CGG + chr2_4:967450-967469 None:intergenic 35.0%
CAGATCCTCATTTGTTCTAA+CGG - chr2_4:967474-967493 Msa0307820:intron 35.0%
GATATGATGAAAAAGGTGAG+TGG + chr2_4:967565-967584 None:intergenic 35.0%
AAAATGAATGTTACCGGAGA+CGG - chr2_4:967672-967691 Msa0307820:intron 35.0%
! TCCATTGTTACACTTTTGAG+GGG + chr2_4:967869-967888 None:intergenic 35.0%
! CTCCATTGTTACACTTTTGA+GGG + chr2_4:967870-967889 None:intergenic 35.0%
! TCTCCATTGTTACACTTTTG+AGG + chr2_4:967871-967890 None:intergenic 35.0%
! GTAACAATGGAGAGTGATTT+TGG - chr2_4:967878-967897 Msa0307820:CDS 35.0%
TGTGCATTCAATTTGGTTAG+GGG + chr2_4:968060-968079 None:intergenic 35.0%
CGTCAAATGTGCATTCAATT+TGG + chr2_4:968067-968086 None:intergenic 35.0%
CTGGTTAAGCATACCATAAA+AGG - chr2_4:968148-968167 Msa0307820:exon 35.0%
TCATATCCTTAACTAGTGTC+CGG - chr2_4:968264-968283 Msa0307820:five_prime_UTR 35.0%
AAAGTAATGTTGTGTCTGTG+TGG + chr2_4:968375-968394 None:intergenic 35.0%
CATTCATTACTGGATTGCAT+TGG - chr2_4:968526-968545 Msa0307820:five_prime_UTR 35.0%
AGTGATTGTAAAGCATAGGT+TGG + chr2_4:968586-968605 None:intergenic 35.0%
TCTGAGTGATTGTAAAGCAT+AGG + chr2_4:968590-968609 None:intergenic 35.0%
AATTAACACAGACACGACAA+AGG + chr2_4:968624-968643 None:intergenic 35.0%
!!! TTTGTTTTGGTGAGAGAGGA+TGG + chr2_4:962563-962582 Msa0307810:five_prime_UTR 40.0%
TCTCTTCCACTTCTATCCAT+TGG - chr2_4:962634-962653 Msa0307820:three_prime_UTR 40.0%
CAACTACCAATGGATAGAAG+TGG + chr2_4:962643-962662 Msa0307810:five_prime_UTR 40.0%
AACTCCCCAAATTAGGGTTA+GGG - chr2_4:962698-962717 Msa0307820:three_prime_UTR 40.0%
GAAACCCTAACCCTAATTTG+GGG + chr2_4:962705-962724 Msa0307810:five_prime_UTR 40.0%
! AGAAGAAGGTTTTCGGATTG+GGG + chr2_4:962783-962802 Msa0307810:five_prime_UTR 40.0%
! GAAGAAGAAGGTTTTCGGAT+TGG + chr2_4:962785-962804 Msa0307810:five_prime_UTR 40.0%
! GTTACCGAAGAAAAGGGTTT+TGG + chr2_4:962824-962843 Msa0307810:five_prime_UTR 40.0%
TGGCGTGATTAGAATTGAGA+CGG + chr2_4:962846-962865 Msa0307810:five_prime_UTR 40.0%
CAACTTTCTCATTGACGACA+CGG + chr2_4:962924-962943 Msa0307810:five_prime_UTR 40.0%
GTCGTCAATGAGAAAGTTGT+CGG - chr2_4:962925-962944 Msa0307820:three_prime_UTR 40.0%
!! GAAAGTTGTCGGTATCGATT+TGG - chr2_4:962936-962955 Msa0307820:three_prime_UTR 40.0%
! GTTCTTGGTGTAAGCAACAA+CGG + chr2_4:963046-963065 Msa0307810:five_prime_UTR 40.0%
! GTTGTTGCTTACACCAAGAA+CGG - chr2_4:963045-963064 Msa0307820:three_prime_UTR 40.0%
TTCTCTGTGAAGAGGTTCAT+TGG - chr2_4:963129-963148 Msa0307820:three_prime_UTR 40.0%
AAACTCGATTGTCCAGCTAT+TGG - chr2_4:963228-963247 Msa0307820:three_prime_UTR 40.0%
TGCTGAAGAAATTTCTGCTC+AGG - chr2_4:963263-963282 Msa0307820:three_prime_UTR 40.0%
GAAGAAATTTCTGCTCAGGT+AGG - chr2_4:963267-963286 Msa0307820:three_prime_UTR 40.0%
AATTTCTGCTCAGGTAGGTT+AGG - chr2_4:963272-963291 Msa0307820:three_prime_UTR 40.0%
!! ACCATTTTGGTCTTTGACCT+TGG - chr2_4:963589-963608 Msa0307820:three_prime_UTR 40.0%
TCCAAGGTCAAAGACCAAAA+TGG + chr2_4:963593-963612 Msa0307810:CDS 40.0%
!! ATTTTGGTCTTTGACCTTGG+AGG - chr2_4:963592-963611 Msa0307820:three_prime_UTR 40.0%
! TTTTGATGTCTCAGTGCTTG+AGG - chr2_4:963621-963640 Msa0307820:three_prime_UTR 40.0%
! TTTGAAGTGCTCTCTACTTC+TGG - chr2_4:963658-963677 Msa0307820:three_prime_UTR 40.0%
TACTTCTGGTGATACACACT+TGG - chr2_4:963672-963691 Msa0307820:three_prime_UTR 40.0%
ACTTCTGGTGATACACACTT+GGG - chr2_4:963673-963692 Msa0307820:three_prime_UTR 40.0%
!! GGGTGGTGATGATTTTGATA+AGG - chr2_4:963693-963712 Msa0307820:three_prime_UTR 40.0%
! GAGCTTGTTTGTCCTTCAAA+AGG + chr2_4:963871-963890 Msa0307810:CDS 40.0%
!! TTTAGCTTTCTCAGCTGTCT+CGG + chr2_4:963906-963925 Msa0307810:CDS 40.0%
GACAGCTGAGAAAGCTAAAA+TGG - chr2_4:963907-963926 Msa0307820:three_prime_UTR 40.0%
CCTGATGTTTGTTTGAGTGA+GGG + chr2_4:963942-963961 Msa0307810:CDS 40.0%
ACCTGATGTTTGTTTGAGTG+AGG + chr2_4:963943-963962 Msa0307810:CDS 40.0%
GAGTGGTCTCAATATGTTTG+GGG + chr2_4:964102-964121 Msa0307810:CDS 40.0%
GAGCTTGTAAAGAAGATGAC+TGG - chr2_4:964442-964461 Msa0307820:intron 40.0%
CTGGATTGACAGTGACATTT+GGG + chr2_4:964474-964493 None:intergenic 40.0%
TCTGGATTGACAGTGACATT+TGG + chr2_4:964475-964494 None:intergenic 40.0%
GGAGAGAATGATGTTTCTCT+GGG - chr2_4:964606-964625 Msa0307820:intron 40.0%
! ATTGATTTAGGCTGGTGTCT+TGG - chr2_4:964683-964702 Msa0307820:intron 40.0%
AGATGTTTCTCCATTGTCCT+TGG - chr2_4:964734-964753 Msa0307820:intron 40.0%
GATGTTTCTCCATTGTCCTT+GGG - chr2_4:964735-964754 Msa0307820:intron 40.0%
!! GAAAACCTCTGATTTTGAGG+TGG + chr2_4:964817-964836 None:intergenic 40.0%
! GGAGAAAACCTCTGATTTTG+AGG + chr2_4:964820-964839 None:intergenic 40.0%
! AGGGTGAGAGAGAATTTGTT+AGG - chr2_4:964883-964902 Msa0307820:intron 40.0%
!! GGGTGAGAGAGAATTTGTTA+GGG - chr2_4:964884-964903 Msa0307820:intron 40.0%
TCGAACTTCACTTCAATCTG+CGG + chr2_4:964969-964988 None:intergenic 40.0%
ATATACCTCATCACTAGGCA+AGG + chr2_4:965078-965097 None:intergenic 40.0%
TATCTGCTTACTACTTCTGG+AGG - chr2_4:965140-965159 Msa0307820:three_prime_UTR 40.0%
!! TTGTTACTCCAGCATTGATG+TGG - chr2_4:965169-965188 Msa0307820:three_prime_UTR 40.0%
!! TGTTACTCCAGCATTGATGT+GGG - chr2_4:965170-965189 Msa0307820:three_prime_UTR 40.0%
! TGGATGATATACAGGTTGAG+AGG - chr2_4:965222-965241 Msa0307820:three_prime_UTR 40.0%
! TGATATACAGGTTGAGAGGA+TGG - chr2_4:965226-965245 Msa0307820:three_prime_UTR 40.0%
! TGAGGCTGAGAGATTTTCAA+AGG - chr2_4:965253-965272 Msa0307820:three_prime_UTR 40.0%
! GAGATTTTCAAAGGAGGACA+AGG - chr2_4:965262-965281 Msa0307820:three_prime_UTR 40.0%
TGCAATAGACACAAAGAACC+AGG - chr2_4:965295-965314 Msa0307820:three_prime_UTR 40.0%
AATAGACACAAAGAACCAGG+CGG - chr2_4:965298-965317 Msa0307820:three_prime_UTR 40.0%
CTTTCAATTGCTTCTCAGTC+TGG + chr2_4:965337-965356 None:intergenic 40.0%
GAGAAGCAATTGAAAGAGCT+AGG - chr2_4:965341-965360 Msa0307820:three_prime_UTR 40.0%
! CTTCCACCTTTTCTTTCACA+GGG + chr2_4:965382-965401 None:intergenic 40.0%
CTGCATAACTTCCTGATTGA+GGG + chr2_4:965474-965493 None:intergenic 40.0%
AATCAGGAAGTTATGCAGCT+TGG - chr2_4:965476-965495 Msa0307820:three_prime_UTR 40.0%
CAGTCTCTATATAACCAACC+TGG - chr2_4:965500-965519 Msa0307820:CDS 40.0%
! TTGCCTGATGATGATTCTGA+GGG + chr2_4:965572-965591 None:intergenic 40.0%
TCAGAATCATCATCAGGCAA+GGG - chr2_4:965572-965591 Msa0307820:CDS 40.0%
! ATTTTTGTCAATGGAGAGCG+AGG - chr2_4:965705-965724 Msa0307820:CDS 40.0%
! TTTTTGTCAATGGAGAGCGA+GGG - chr2_4:965706-965725 Msa0307820:CDS 40.0%
GTATAAAGGATTGTCACGAC+TGG - chr2_4:965960-965979 Msa0307820:intron 40.0%
ACAAATTACCATTAGCGAGC+CGG - chr2_4:966062-966081 Msa0307820:CDS 40.0%
! CTTTTTAACATTCACGCTCG+AGG - chr2_4:966096-966115 Msa0307820:CDS 40.0%
TCCAATTCCTCTTGGTATTC+TGG - chr2_4:966127-966146 Msa0307820:CDS 40.0%
ACCAGAATACCAAGAGGAAT+TGG + chr2_4:966131-966150 None:intergenic 40.0%
AACACAATATCCACACCATC+TGG + chr2_4:966158-966177 None:intergenic 40.0%
AAAATAGCGTAGAGCATGCT+AGG - chr2_4:966490-966509 Msa0307820:intron 40.0%
TGATTCCGATGTTGGAGAAT+TGG + chr2_4:966538-966557 None:intergenic 40.0%
GAAGTCCCAGAATGTCTATA+TGG + chr2_4:966763-966782 None:intergenic 40.0%
!! TATAGACATTCTGGGACTTC+GGG - chr2_4:966763-966782 Msa0307820:CDS 40.0%
ACATAAAGCGTATGCATACC+AGG + chr2_4:966834-966853 None:intergenic 40.0%
TGGTATGCATACGCTTTATG+TGG - chr2_4:966833-966852 Msa0307820:intron 40.0%
ACAGATAATAGCAGCAGTAG+GGG + chr2_4:966890-966909 None:intergenic 40.0%
GACAGATAATAGCAGCAGTA+GGG + chr2_4:966891-966910 None:intergenic 40.0%
TGACAGATAATAGCAGCAGT+AGG + chr2_4:966892-966911 None:intergenic 40.0%
TCAGACCCATACAAGAACAA+GGG + chr2_4:966979-966998 None:intergenic 40.0%
TTCAGACCCATACAAGAACA+AGG + chr2_4:966980-966999 None:intergenic 40.0%
TGTATGGGTCTGAATGCAAT+AGG - chr2_4:966986-967005 Msa0307820:CDS 40.0%
GTATGGGTCTGAATGCAATA+GGG - chr2_4:966987-967006 Msa0307820:CDS 40.0%
TATGGGTCTGAATGCAATAG+GGG - chr2_4:966988-967007 Msa0307820:CDS 40.0%
GTTTGCATCAGTTAAAGGGT+AGG + chr2_4:967156-967175 None:intergenic 40.0%
CACGGTTTGCATCAGTTAAA+GGG + chr2_4:967160-967179 None:intergenic 40.0%
TCTGTGTTCGTATGCTTATC+TGG - chr2_4:967193-967212 Msa0307820:CDS 40.0%
CTGTGTTCGTATGCTTATCT+GGG - chr2_4:967194-967213 Msa0307820:CDS 40.0%
TGTGTTCGTATGCTTATCTG+GGG - chr2_4:967195-967214 Msa0307820:CDS 40.0%
!! ATTTCCTTCGAAGCCACTTT+TGG + chr2_4:967389-967408 None:intergenic 40.0%
! TCTTTGCAGTTATGGTGGAA+AGG + chr2_4:967776-967795 None:intergenic 40.0%
! ACCCCTCAAAAGTGTAACAA+TGG - chr2_4:967865-967884 Msa0307820:CDS 40.0%
TCAATTTGGTTAGGGGAAGT+TGG + chr2_4:968053-968072 None:intergenic 40.0%
ATTATTAGGGTCCTGCTAAC+CGG - chr2_4:968112-968131 Msa0307820:CDS 40.0%
CATATCCTTAACTAGTGTCC+GGG - chr2_4:968265-968284 Msa0307820:five_prime_UTR 40.0%
ATATCCTTAACTAGTGTCCG+GGG - chr2_4:968266-968285 Msa0307820:five_prime_UTR 40.0%
TCCTCTTTGGATTCCAAAAG+AGG - chr2_4:968498-968517 Msa0307820:five_prime_UTR 40.0%
TTTGGATTCCAAAAGAGGCA+TGG - chr2_4:968503-968522 Msa0307820:five_prime_UTR 40.0%
! AATGAATGCCATGCCTCTTT+TGG + chr2_4:968514-968533 None:intergenic 40.0%
CATTACTGGATTGCATTGGA+TGG - chr2_4:968530-968549 Msa0307820:five_prime_UTR 40.0%
TGAGAGAGGATGGATAGGTT+TGG + chr2_4:962553-962572 Msa0307810:five_prime_UTR 45.0%
TTTGGTGAGAGAGGATGGAT+AGG + chr2_4:962558-962577 Msa0307810:five_prime_UTR 45.0%
!!! GGGTTTTGTTTTGGTGAGAG+AGG + chr2_4:962567-962586 Msa0307810:five_prime_UTR 45.0%
CAACTCCCCAAATTAGGGTT+AGG - chr2_4:962697-962716 Msa0307820:three_prime_UTR 45.0%
! TCAAGTGCTGCCCAAATACA+CGG - chr2_4:962746-962765 Msa0307820:three_prime_UTR 45.0%
GAAACCAAGGCCGTGTATTT+GGG + chr2_4:962759-962778 Msa0307810:five_prime_UTR 45.0%
AGAAACCAAGGCCGTGTATT+TGG + chr2_4:962760-962779 Msa0307810:five_prime_UTR 45.0%
GAGACGGTTACCGAAGAAAA+GGG + chr2_4:962830-962849 Msa0307810:five_prime_UTR 45.0%
TGAGACGGTTACCGAAGAAA+AGG + chr2_4:962831-962850 Msa0307810:five_prime_UTR 45.0%
GGTGGATAATTTGGGGAATG+CGG + chr2_4:962881-962900 Msa0307810:five_prime_UTR 45.0%
GAAGGTGAAAGGCTTTCTGT+TGG + chr2_4:962902-962921 Msa0307810:five_prime_UTR 45.0%
TTTCTCATTGACGACACGGA+AGG + chr2_4:962920-962939 Msa0307810:five_prime_UTR 45.0%
TTGGTGTAAGCAACAACGGA+GGG + chr2_4:963042-963061 Msa0307810:five_prime_UTR 45.0%
!! ACAGAGAAGAAGGTGTTCTC+GGG + chr2_4:963117-963136 Msa0307810:five_prime_UTR 45.0%
!! CACAGAGAAGAAGGTGTTCT+CGG + chr2_4:963118-963137 Msa0307810:five_prime_UTR 45.0%
ACACCTTCTTCTCTGTGAAG+AGG - chr2_4:963121-963140 Msa0307820:three_prime_UTR 45.0%
GAACCTCTTCACAGAGAAGA+AGG + chr2_4:963127-963146 Msa0307810:five_prime_UTR 45.0%
CTGTGAAGAGGTTCATTGGT+AGG - chr2_4:963133-963152 Msa0307820:three_prime_UTR 45.0%
CATTGGTAGGAAGATGTCTG+AGG - chr2_4:963146-963165 Msa0307820:three_prime_UTR 45.0%
TTCACAAAGGACTGCTACCA+AGG - chr2_4:963471-963490 Msa0307820:intron 45.0%
CCTTTCGAAACCATAAGCCA+AGG + chr2_4:963557-963576 Msa0307810:CDS 45.0%
CCTTGGCTTATGGTTTCGAA+AGG - chr2_4:963554-963573 Msa0307820:three_prime_UTR 45.0%
!! CATCAAAAGTACCACCTCCA+AGG + chr2_4:963609-963628 Msa0307810:CDS 45.0%
! AGAGTTGTTGATTGGTTGGC+TGG - chr2_4:963818-963837 Msa0307820:three_prime_UTR 45.0%
GGAGACTTCAAGAGAGATGA+AGG - chr2_4:963839-963858 Msa0307820:three_prime_UTR 45.0%
CCCTCACTCAAACAAACATC+AGG - chr2_4:963939-963958 Msa0307820:three_prime_UTR 45.0%
TCTGCTGTGGCAGTTATGAA+CGG + chr2_4:964076-964095 Msa0307810:CDS 45.0%
TTCATAACTGCCACAGCAGA+TGG - chr2_4:964076-964095 Msa0307820:three_prime_UTR 45.0%
GATGAGGTGATTCTTGTTGG+TGG - chr2_4:964394-964413 Msa0307820:intron 45.0%
TTACAAGCTCCTGAACAGCA+GGG + chr2_4:964432-964451 Msa0307810:three_prime_UTR 45.0%
TTTACAAGCTCCTGAACAGC+AGG + chr2_4:964433-964452 Msa0307810:three_prime_UTR 45.0%
CACTGTCAATCCAGATGAAG+TGG - chr2_4:964480-964499 Msa0307820:intron 45.0%
CGGTTTAGCTGTTCTCATCA+AGG - chr2_4:964528-964547 Msa0307820:intron 45.0%
GGGAGAGAATGATGTTTCTC+TGG - chr2_4:964605-964624 Msa0307820:intron 45.0%
TTCTCCATTGTCCTTGGGTT+TGG - chr2_4:964740-964759 Msa0307820:intron 45.0%
GTTTCCAAACCCAAGGACAA+TGG + chr2_4:964747-964766 None:intergenic 45.0%
TCCTTGGGTTTGGAAACTCT+AGG - chr2_4:964750-964769 Msa0307820:intron 45.0%
ACCTAGAGTTTCCAAACCCA+AGG + chr2_4:964754-964773 None:intergenic 45.0%
TTGGGTTTGGAAACTCTAGG+TGG - chr2_4:964753-964772 Msa0307820:intron 45.0%
TGGGTTTGGAAACTCTAGGT+GGG - chr2_4:964754-964773 Msa0307820:intron 45.0%
!!! CTCTGATTTTGAGGTGGGAA+GGG + chr2_4:964811-964830 None:intergenic 45.0%
CAAATTCTCTCTCACCCTGA+AGG + chr2_4:964881-964900 None:intergenic 45.0%
TCAGTTGCTGCCATAGACAA+GGG - chr2_4:965011-965030 Msa0307820:three_prime_UTR 45.0%
ATTGATGTGGGAAGCTGTTC+CGG - chr2_4:965182-965201 Msa0307820:three_prime_UTR 45.0%
! GGCTGAGAGATTTTCAAAGG+AGG - chr2_4:965256-965275 Msa0307820:three_prime_UTR 45.0%
AAAGGAGGACAAGGAGAAGA+GGG - chr2_4:965271-965290 Msa0307820:three_prime_UTR 45.0%
! GCTTCCACCTTTTCTTTCAC+AGG + chr2_4:965383-965402 None:intergenic 45.0%
AGAAAAGGTGGAAGCAAAGC+TGG - chr2_4:965388-965407 Msa0307820:three_prime_UTR 45.0%
GCTGCATAACTTCCTGATTG+AGG + chr2_4:965475-965494 None:intergenic 45.0%
! TGCCTGATGATGATTCTGAG+GGG + chr2_4:965571-965590 None:intergenic 45.0%
! CTTGCCTGATGATGATTCTG+AGG + chr2_4:965573-965592 None:intergenic 45.0%
CTCAGAATCATCATCAGGCA+AGG - chr2_4:965571-965590 Msa0307820:CDS 45.0%
GTGCTTCTTCCGTGCTAAAT+TGG - chr2_4:965677-965696 Msa0307820:CDS 45.0%
GACGCACGTTTCTGTATCTT+TGG - chr2_4:965766-965785 Msa0307820:CDS 45.0%
!! ATTGTCACGACTGGCTTGAT+TGG - chr2_4:965969-965988 Msa0307820:intron 45.0%
AACTCTGGTCCAATTCCTCT+TGG - chr2_4:966119-966138 Msa0307820:CDS 45.0%
GGAGAAACCAGAATACCAAG+AGG + chr2_4:966137-966156 None:intergenic 45.0%
!! GGTATTCTGGTTTCTCCAGA+TGG - chr2_4:966140-966159 Msa0307820:CDS 45.0%
AGGGCAGAGTTATTCATCAC+AGG + chr2_4:966202-966221 None:intergenic 45.0%
GTGCACTTTGATTCCGATGT+TGG + chr2_4:966546-966565 None:intergenic 45.0%
!! AGTTTGTTGTGAGAAGGGAG+AGG - chr2_4:966718-966737 Msa0307820:CDS 45.0%
!! ATAGACATTCTGGGACTTCG+GGG - chr2_4:966764-966783 Msa0307820:CDS 45.0%
TATGACCAACAGAGTCATCC+TGG - chr2_4:966813-966832 Msa0307820:intron 45.0%
TTTATGTGGTCTGTTTGCCG+TGG - chr2_4:966847-966866 Msa0307820:intron 45.0%
CAAGGGATAAACATGGGGAT+GGG + chr2_4:966962-966981 None:intergenic 45.0%
ACAAGGGATAAACATGGGGA+TGG + chr2_4:966963-966982 None:intergenic 45.0%
ATGGGTCTGAATGCAATAGG+GGG - chr2_4:966989-967008 Msa0307820:CDS 45.0%
CCACGGTTTGCATCAGTTAA+AGG + chr2_4:967161-967180 None:intergenic 45.0%
CCTTTAACTGATGCAAACCG+TGG - chr2_4:967158-967177 Msa0307820:intron 45.0%
TTAACTGATGCAAACCGTGG+TGG - chr2_4:967161-967180 Msa0307820:intron 45.0%
CGTGGTGCAAAATTAGACCT+GGG - chr2_4:967247-967266 Msa0307820:CDS 45.0%
GTGGTGCAAAATTAGACCTG+GGG - chr2_4:967248-967267 Msa0307820:CDS 45.0%
CGCTACATTGATGCCATCAA+TGG + chr2_4:967289-967308 None:intergenic 45.0%
!! ACAGATAGTGGATGTAGTCC+TGG - chr2_4:967331-967350 Msa0307820:intron 45.0%
TTGACCAAAAGTGGCTTCGA+AGG - chr2_4:967382-967401 Msa0307820:intron 45.0%
! GGATCTGAAGCACATGATTG+AGG + chr2_4:967461-967480 None:intergenic 45.0%
GGTGTCCGTTAGAACAAATG+AGG + chr2_4:967482-967501 None:intergenic 45.0%
ACCAATGCATCAAGCTCTTC+AGG - chr2_4:967499-967518 Msa0307820:intron 45.0%
CCAATGCATCAAGCTCTTCA+GGG - chr2_4:967500-967519 Msa0307820:intron 45.0%
! AGAGGTGGTGTTAAAGTACC+AGG + chr2_4:967530-967549 None:intergenic 45.0%
GATGAAAAAGGTGAGTGGCA+TGG + chr2_4:967560-967579 None:intergenic 45.0%
!!! GCCTCTTTTGGAATCCAAAG+AGG + chr2_4:968502-968521 None:intergenic 45.0%
! AGAGGCATGGCATTCATTAC+TGG - chr2_4:968516-968535 Msa0307820:five_prime_UTR 45.0%
ACTGGATTGCATTGGATGGA+TGG - chr2_4:968534-968553 Msa0307820:five_prime_UTR 45.0%
GTGTATTTGGGCAGCACTTG+AGG + chr2_4:962747-962766 Msa0307810:five_prime_UTR 50.0%
! TTCGGATTGGGGAGAAACCA+AGG + chr2_4:962772-962791 Msa0307810:five_prime_UTR 50.0%
GGTGAAAGGCTTTCTGTTGG+TGG + chr2_4:962899-962918 Msa0307810:five_prime_UTR 50.0%
TTGACGACACGGAAGGTGAA+AGG + chr2_4:962913-962932 Msa0307810:five_prime_UTR 50.0%
! CTTGGTGTAAGCAACAACGG+AGG + chr2_4:963043-963062 Msa0307810:five_prime_UTR 50.0%
GGTGTTCTCGGGATTAACGA+CGG + chr2_4:963106-963125 Msa0307810:five_prime_UTR 50.0%
TGAACCAACTGCTGCATCCT+TGG - chr2_4:963537-963556 Msa0307820:intron 50.0%
TAAGCCAAGGATGCAGCAGT+TGG + chr2_4:963544-963563 Msa0307810:intron 50.0%
ACTGCTGCATCCTTGGCTTA+TGG - chr2_4:963544-963563 Msa0307820:intron 50.0%
! TTGGTCTTTGACCTTGGAGG+TGG - chr2_4:963595-963614 Msa0307820:three_prime_UTR 50.0%
GATGTCTCAGTGCTTGAGGT+TGG - chr2_4:963625-963644 Msa0307820:three_prime_UTR 50.0%
!! TCAGTGCTTGAGGTTGGTGA+TGG - chr2_4:963631-963650 Msa0307820:three_prime_UTR 50.0%
TCTGGTGATACACACTTGGG+TGG - chr2_4:963676-963695 Msa0307820:three_prime_UTR 50.0%
AACACGTATCCCTGCTGTTC+AGG - chr2_4:964420-964439 Msa0307820:intron 50.0%
CAGATGAAGTGGTTGCCCTT+GGG - chr2_4:964491-964510 Msa0307820:intron 50.0%
AGATGAAGTGGTTGCCCTTG+GGG - chr2_4:964492-964511 Msa0307820:intron 50.0%
ATTTAGGCTGGTGTCTTGGC+TGG - chr2_4:964687-964706 Msa0307820:intron 50.0%
GGGTTTGGAAACTCTAGGTG+GGG - chr2_4:964755-964774 Msa0307820:intron 50.0%
GTGGGAAGGGTAGTGTTTCT+GGG + chr2_4:964798-964817 None:intergenic 50.0%
!!! CCTCTGATTTTGAGGTGGGA+AGG + chr2_4:964812-964831 None:intergenic 50.0%
CCTTCCCACCTCAAAATCAG+AGG - chr2_4:964809-964828 Msa0307820:intron 50.0%
!! ACTGGTTTGTCCATCAGCAG+CGG + chr2_4:964844-964863 None:intergenic 50.0%
! ATCTCTTGGTAGCTTCCGCT+TGG - chr2_4:964914-964933 Msa0307820:three_prime_UTR 50.0%
GTCAGTTGCTGCCATAGACA+AGG - chr2_4:965010-965029 Msa0307820:three_prime_UTR 50.0%
!! CAAGGTACTGGCACCAGTAA+TGG + chr2_4:965060-965079 None:intergenic 50.0%
CTCATCACTAGGCAAGGTAC+TGG + chr2_4:965072-965091 None:intergenic 50.0%
CAGTACCTTGCCTAGTGATG+AGG - chr2_4:965070-965089 Msa0307820:three_prime_UTR 50.0%
ACAGCTTCCCACATCAATGC+TGG + chr2_4:965180-965199 None:intergenic 50.0%
GGTTGAGAGGATGGTCAATG+AGG - chr2_4:965235-965254 Msa0307820:three_prime_UTR 50.0%
CAAAGGAGGACAAGGAGAAG+AGG - chr2_4:965270-965289 Msa0307820:three_prime_UTR 50.0%
!! GAGCTAGGAGAAAAGGTACC+TGG - chr2_4:965356-965375 Msa0307820:three_prime_UTR 50.0%
ACCTGGCCCTGTGAAAGAAA+AGG - chr2_4:965373-965392 Msa0307820:three_prime_UTR 50.0%
! ACCTTTTCTTTCACAGGGCC+AGG + chr2_4:965377-965396 None:intergenic 50.0%
TGGCCCTGTGAAAGAAAAGG+TGG - chr2_4:965376-965395 Msa0307820:three_prime_UTR 50.0%
! TCTGGTTTCTCCAGATGGTG+TGG - chr2_4:966145-966164 Msa0307820:CDS 50.0%
ACTCTGCCCTTGCAACCATT+AGG - chr2_4:966212-966231 Msa0307820:CDS 50.0%
!! TAGACATTCTGGGACTTCGG+GGG - chr2_4:966765-966784 Msa0307820:CDS 50.0%
GCATACCAGGATGACTCTGT+TGG + chr2_4:966821-966840 None:intergenic 50.0%
GGATAAACATGGGGATGGGA+AGG + chr2_4:966958-966977 None:intergenic 50.0%
TGGGTCTGAATGCAATAGGG+GGG - chr2_4:966990-967009 Msa0307820:CDS 50.0%
TGAATGCAATAGGGGGGTTG+TGG - chr2_4:966996-967015 Msa0307820:CDS 50.0%
! TGATGCAAACCGTGGTGGAA+GGG - chr2_4:967166-967185 Msa0307820:intron 50.0%
GCGTGGTGCAAAATTAGACC+TGG - chr2_4:967246-967265 Msa0307820:CDS 50.0%
AATTAGACCTGGGGCTTGTG+CGG - chr2_4:967257-967276 Msa0307820:CDS 50.0%
TGTGCGGACGATTCCATTGA+TGG - chr2_4:967273-967292 Msa0307820:CDS 50.0%
!! GATAGTGGATGTAGTCCTGG+TGG - chr2_4:967334-967353 Msa0307820:intron 50.0%
GAACATGATCGGCATGAGAC+CGG + chr2_4:967439-967458 None:intergenic 50.0%
CCCTGAAGAGCTTGATGCAT+TGG + chr2_4:967503-967522 None:intergenic 50.0%
AAGGTGAGTGGCATGGTTGA+TGG + chr2_4:967553-967572 None:intergenic 50.0%
GATGGGGTCCTCAAGTATGT+GGG + chr2_4:967736-967755 None:intergenic 50.0%
CACATACTTGAGGACCCCAT+CGG - chr2_4:967735-967754 Msa0307820:intron 50.0%
TTCTACCACGATCCTCCGAT+GGG + chr2_4:967753-967772 None:intergenic 50.0%
ATGCTTAACCAGTGCCCCAA+GGG + chr2_4:968140-968159 None:intergenic 50.0%
TATGCTTAACCAGTGCCCCA+AGG + chr2_4:968141-968160 None:intergenic 50.0%
AGGTTTGCCACCTTCCATGG+CGG + chr2_4:962983-963002 Msa0307810:five_prime_UTR 55.0%
GGTAGGTTTGCCACCTTCCA+TGG + chr2_4:962986-963005 Msa0307810:five_prime_UTR 55.0%
!! TCGGCGTTGGTGATGATGGT+AGG + chr2_4:963003-963022 Msa0307810:five_prime_UTR 55.0%
ACCATCATCACCAACGCCGA+AGG - chr2_4:963003-963022 Msa0307820:three_prime_UTR 55.0%
!! ACCTTCGGCGTTGGTGATGA+TGG + chr2_4:963007-963026 Msa0307810:five_prime_UTR 55.0%
GTAAGCAACAACGGAGGGAG+TGG + chr2_4:963037-963056 Msa0307810:five_prime_UTR 55.0%
AAGAACGGCGACAGACTCGT+CGG - chr2_4:963060-963079 Msa0307820:three_prime_UTR 55.0%
ATTAACGACGGCCTGACGCT+TGG + chr2_4:963094-963113 Msa0307810:five_prime_UTR 55.0%
AGGACTGCTACCAAGGATGC+AGG - chr2_4:963478-963497 Msa0307820:intron 55.0%
AGCAATCCTGCCTGCATCCT+TGG + chr2_4:963491-963510 Msa0307810:intron 55.0%
AAGGATGCAGGCAGGATTGC+TGG - chr2_4:963490-963509 Msa0307820:intron 55.0%
! ATGTTTGGGGCCATCTGCTG+TGG + chr2_4:964089-964108 Msa0307810:CDS 55.0%
CCAAGGGCAACCACTTCATC+TGG + chr2_4:964493-964512 None:intergenic 55.0%
CCAGATGAAGTGGTTGCCCT+TGG - chr2_4:964490-964509 Msa0307820:intron 55.0%
GGTGGGAAGGGTAGTGTTTC+TGG + chr2_4:964799-964818 None:intergenic 55.0%
! GTTTTCTCCACCGCTGCTGA+TGG - chr2_4:964831-964850 Msa0307820:intron 55.0%
! CTTGGTAGCTTCCGCTTGGA+CGG - chr2_4:964918-964937 Msa0307820:three_prime_UTR 55.0%
CAGGAGGAATACCGTCCAAG+CGG + chr2_4:964932-964951 None:intergenic 55.0%
TTCAATCTGCGGAACCCCAC+GGG + chr2_4:964958-964977 None:intergenic 55.0%
CTTCAATCTGCGGAACCCCA+CGG + chr2_4:964959-964978 None:intergenic 55.0%
! CTGCCATAGACAAGGGCACA+GGG - chr2_4:965018-965037 Msa0307820:three_prime_UTR 55.0%
CTTCCCTGTGCCCTTGTCTA+TGG + chr2_4:965024-965043 None:intergenic 55.0%
! CAAGGGCACAGGGAAGAAAC+AGG - chr2_4:965028-965047 Msa0307820:three_prime_UTR 55.0%
TTCCTGATTGAGGGCAGCCA+TGG + chr2_4:965465-965484 None:intergenic 55.0%
GGCCCCTCAGAATCATCATC+AGG - chr2_4:965566-965585 Msa0307820:CDS 55.0%
TCATCAGGCAAGGGAGCAGA+TGG - chr2_4:965581-965600 Msa0307820:CDS 55.0%
CATCAGGCAAGGGAGCAGAT+GGG - chr2_4:965582-965601 Msa0307820:CDS 55.0%
ATCAGGCAAGGGAGCAGATG+GGG - chr2_4:965583-965602 Msa0307820:CDS 55.0%
!! CGACTGGCTTGATTGGACGA+CGG - chr2_4:965976-965995 Msa0307820:intron 55.0%
GCTTGATTGGACGACGGTGT+AGG - chr2_4:965982-966001 Msa0307820:intron 55.0%
! ACTGCTTTCCGGCTCGCTAA+TGG + chr2_4:966073-966092 None:intergenic 55.0%
CATTCACGCTCGAGGAACTC+TGG - chr2_4:966104-966123 Msa0307820:CDS 55.0%
CAGCAGCAGCAGCATGATCA+TGG + chr2_4:967046-967065 None:intergenic 55.0%
GACAATCACCACCCCAACAG+CGG + chr2_4:967069-967088 None:intergenic 55.0%
TTGGGCGAGCTTCTCACTCT+TGG - chr2_4:967121-967140 Msa0307820:intron 55.0%
! CTGATGCAAACCGTGGTGGA+AGG - chr2_4:967165-967184 Msa0307820:intron 55.0%
GGTGAAGAACATGCAGAGCG+TGG - chr2_4:967229-967248 Msa0307820:CDS 55.0%
CAAATGCAAGGGCAACCACC+AGG + chr2_4:967352-967371 None:intergenic 55.0%
CAAGCTCTTCAGGGATCACC+TGG - chr2_4:967509-967528 Msa0307820:intron 55.0%
!! TGGCATGGTTGATGGAGAGG+TGG + chr2_4:967545-967564 None:intergenic 55.0%
!! GAGTGGCATGGTTGATGGAG+AGG + chr2_4:967548-967567 None:intergenic 55.0%
CGATGGGGTCCTCAAGTATG+TGG + chr2_4:967737-967756 None:intergenic 55.0%
ATACTTGAGGACCCCATCGG+AGG - chr2_4:967738-967757 Msa0307820:intron 55.0%
TCTACCACGATCCTCCGATG+GGG + chr2_4:967752-967771 None:intergenic 55.0%
GTTCTACCACGATCCTCCGA+TGG + chr2_4:967754-967773 None:intergenic 55.0%
TTAACTAGTGTCCGGGGCAC+CGG - chr2_4:968272-968291 Msa0307820:five_prime_UTR 55.0%
GCTGCCCAAATACACGGCCT+TGG - chr2_4:962752-962771 Msa0307820:three_prime_UTR 60.0%
ATTTGGGGAATGCGGCGCGA+GGG + chr2_4:962873-962892 Msa0307810:five_prime_UTR 60.0%
AATTTGGGGAATGCGGCGCG+AGG + chr2_4:962874-962893 Msa0307810:five_prime_UTR 60.0%
GGGAGTGGTACGCTGACCTT+CGG + chr2_4:963022-963041 Msa0307810:five_prime_UTR 60.0%
GACGAGTCTGTCGCCGTTCT+TGG + chr2_4:963061-963080 Msa0307810:five_prime_UTR 60.0%
CGGTCAGATTGCCAAGCGTC+AGG - chr2_4:963080-963099 Msa0307820:three_prime_UTR 60.0%
CTGCTACCAAGGATGCAGGC+AGG - chr2_4:963482-963501 Msa0307820:intron 60.0%
GACCTGAACTGCAGCCCCAA+GGG + chr2_4:964509-964528 None:intergenic 60.0%
CTTGGGGCTGCAGTTCAGGT+CGG - chr2_4:964508-964527 Msa0307820:intron 60.0%
GGTTTGTCCATCAGCAGCGG+TGG + chr2_4:964841-964860 None:intergenic 60.0%
GTATTCCTCCTGCTCCCCGT+GGG - chr2_4:964940-964959 Msa0307820:three_prime_UTR 60.0%
TATTCCTCCTGCTCCCCGTG+GGG - chr2_4:964941-964960 Msa0307820:three_prime_UTR 60.0%
TCAATCTGCGGAACCCCACG+GGG + chr2_4:964957-964976 None:intergenic 60.0%
! GCTGCCATAGACAAGGGCAC+AGG - chr2_4:965017-965036 Msa0307820:three_prime_UTR 60.0%
GGTAGACAACAGAGTCCGCC+TGG + chr2_4:965316-965335 None:intergenic 60.0%
TGCCATGGCTGCCCTCAATC+AGG - chr2_4:965460-965479 Msa0307820:three_prime_UTR 60.0%
CTGCATCTGCAGCTCCAGGT+TGG + chr2_4:965517-965536 None:intergenic 60.0%
GACTCGCTACCAGGTGGTGT+AGG + chr2_4:965545-965564 None:intergenic 60.0%
! ACACCACCTGGTAGCGAGTC+TGG - chr2_4:965545-965564 Msa0307820:CDS 60.0%
!! CATTCTGGGACTTCGGGGGA+CGG - chr2_4:966769-966788 Msa0307820:CDS 60.0%
ACAGACTCGCCCTTCCACCA+CGG + chr2_4:967178-967197 None:intergenic 60.0%
ACGAAGCAATGGGGCTCCTC+CGG - chr2_4:967417-967436 Msa0307820:intron 60.0%
CATGATCGGCATGAGACCGG+AGG + chr2_4:967436-967455 None:intergenic 60.0%
TCTCCCCGCCCACATACTTG+AGG - chr2_4:967725-967744 Msa0307820:intron 60.0%
GGTCCTCAAGTATGTGGGCG+GGG + chr2_4:967731-967750 None:intergenic 60.0%
GGGTCCTCAAGTATGTGGGC+GGG + chr2_4:967732-967751 None:intergenic 60.0%
GGGGTCCTCAAGTATGTGGG+CGG + chr2_4:967733-967752 None:intergenic 60.0%
TCCTGCTAACCGGTGCCCTT+GGG - chr2_4:968122-968141 Msa0307820:CDS 60.0%
GGTGCCCCGGACACTAGTTA+AGG + chr2_4:968273-968292 None:intergenic 60.0%
GGAAATGCTAACCGGTGCCC+CGG + chr2_4:968286-968305 None:intergenic 60.0%
AAATTCCGCCGTCGCCGCCA+TGG - chr2_4:962966-962985 Msa0307820:three_prime_UTR 65.0%
GGTACGCTGACCTTCGGCGT+TGG + chr2_4:963016-963035 Msa0307810:five_prime_UTR 65.0%
TGCCCTTGGGGCTGCAGTTC+AGG - chr2_4:964504-964523 Msa0307820:intron 65.0%
CGACCTGAACTGCAGCCCCA+AGG + chr2_4:964510-964529 None:intergenic 65.0%
GGTATTCCTCCTGCTCCCCG+TGG - chr2_4:964939-964958 Msa0307820:three_prime_UTR 65.0%
CCTGCTGCATCTGCAGCTCC+AGG + chr2_4:965521-965540 None:intergenic 65.0%
CCTGGAGCTGCAGATGCAGC+AGG - chr2_4:965518-965537 Msa0307820:CDS 65.0%
GCAGCAGGACCTACACCACC+TGG - chr2_4:965533-965552 Msa0307820:CDS 65.0%
CTGCTGCTGCTGCCGCTGTT+GGG - chr2_4:967054-967073 Msa0307820:intron 65.0%
TGCTGCTGCTGCCGCTGTTG+GGG - chr2_4:967055-967074 Msa0307820:intron 65.0%
GAATCGTCCGCACAAGCCCC+AGG + chr2_4:967267-967286 None:intergenic 65.0%
AGGACCCCATCGGAGGATCG+TGG - chr2_4:967745-967764 Msa0307820:intron 65.0%
GTCCTGCTAACCGGTGCCCT+TGG - chr2_4:968121-968140 Msa0307820:CDS 65.0%
CCTGCTAACCGGTGCCCTTG+GGG - chr2_4:968123-968142 Msa0307820:CDS 65.0%
! AACCAGTGCCCCAAGGGCAC+CGG + chr2_4:968134-968153 None:intergenic 65.0%
GAATGCGGCGCGAGGGAAGG+TGG + chr2_4:962866-962885 Msa0307810:five_prime_UTR 70.0%
ACCTTCCATGGCGGCGACGG+CGG + chr2_4:962974-962993 Msa0307810:five_prime_UTR 70.0%
GCCACCTTCCATGGCGGCGA+CGG + chr2_4:962977-962996 Msa0307810:five_prime_UTR 70.0%
GGGCCAGACTCGCTACCAGG+TGG + chr2_4:965551-965570 None:intergenic 70.0%
GAGGGGCCAGACTCGCTACC+AGG + chr2_4:965554-965573 None:intergenic 70.0%
GCTGCTGCTGCTGCCGCTGT+TGG - chr2_4:967053-967072 Msa0307820:intron 70.0%
TGCTGCTGCCGCTGTTGGGG+TGG - chr2_4:967058-967077 Msa0307820:intron 70.0%
CCTCGCGACGTCACCGTCTC+CGG + chr2_4:967688-967707 None:intergenic 70.0%
CGGAGACGGTGACGTCGCGA+GGG - chr2_4:967686-967705 Msa0307820:intron 70.0%
!! CCCCAAGGGCACCGGTTAGC+AGG + chr2_4:968126-968145 None:intergenic 70.0%
AACCGGTGCCCTTGGGGCAC+TGG - chr2_4:968129-968148 Msa0307820:CDS 70.0%
GGGGAATGCGGCGCGAGGGA+AGG + chr2_4:962869-962888 Msa0307810:five_prime_UTR 75.0%
TCCGCCGTCGCCGCCATGGA+AGG - chr2_4:962970-962989 Msa0307820:three_prime_UTR 75.0%
GCCGTCGCCGCCATGGAAGG+TGG - chr2_4:962973-962992 Msa0307820:three_prime_UTR 75.0%
GGAACCCCACGGGGAGCAGG+AGG + chr2_4:964948-964967 None:intergenic 75.0%
TGCGGAACCCCACGGGGAGC+AGG + chr2_4:964951-964970 None:intergenic 75.0%
CCGGAGACGGTGACGTCGCG+AGG - chr2_4:967685-967704 Msa0307820:intron 75.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 962453 968683 962453 ID=Msa0307820;Name=Msa0307820
chr2_4 mRNA 962453 968683 962453 ID=Msa0307820-mRNA-1;Parent=Msa0307820;Name=Msa0307820-mRNA-1;_AED=0.14;_eAED=0.14;_QI=532|0.85|1|1|0.71|0.62|8|2167|511
chr2_4 exon 962453 963447 962453 ID=Msa0307820-mRNA-1:exon:375;Parent=Msa0307820-mRNA-1
chr2_4 exon 963550 964128 963550 ID=Msa0307820-mRNA-1:exon:374;Parent=Msa0307820-mRNA-1
chr2_4 exon 964903 965900 964903 ID=Msa0307820-mRNA-1:exon:373;Parent=Msa0307820-mRNA-1
chr2_4 exon 966045 966443 966045 ID=Msa0307820-mRNA-1:exon:372;Parent=Msa0307820-mRNA-1
chr2_4 exon 966611 966800 966611 ID=Msa0307820-mRNA-1:exon:371;Parent=Msa0307820-mRNA-1
chr2_4 exon 966969 967067 966969 ID=Msa0307820-mRNA-1:exon:370;Parent=Msa0307820-mRNA-1
chr2_4 exon 967176 967318 967176 ID=Msa0307820-mRNA-1:exon:369;Parent=Msa0307820-mRNA-1
chr2_4 exon 967852 968683 967852 ID=Msa0307820-mRNA-1:exon:368;Parent=Msa0307820-mRNA-1
chr2_4 five_prime_UTR 968152 968683 968152 ID=Msa0307820-mRNA-1:five_prime_utr;Parent=Msa0307820-mRNA-1
chr2_4 CDS 967852 968151 967852 ID=Msa0307820-mRNA-1:cds;Parent=Msa0307820-mRNA-1
chr2_4 CDS 967176 967318 967176 ID=Msa0307820-mRNA-1:cds;Parent=Msa0307820-mRNA-1
chr2_4 CDS 966969 967067 966969 ID=Msa0307820-mRNA-1:cds;Parent=Msa0307820-mRNA-1
chr2_4 CDS 966611 966800 966611 ID=Msa0307820-mRNA-1:cds;Parent=Msa0307820-mRNA-1
chr2_4 CDS 966045 966443 966045 ID=Msa0307820-mRNA-1:cds;Parent=Msa0307820-mRNA-1
chr2_4 CDS 965496 965900 965496 ID=Msa0307820-mRNA-1:cds;Parent=Msa0307820-mRNA-1
chr2_4 three_prime_UTR 964903 965495 964903 ID=Msa0307820-mRNA-1:three_prime_utr;Parent=Msa0307820-mRNA-1
chr2_4 three_prime_UTR 963550 964128 963550 ID=Msa0307820-mRNA-1:three_prime_utr;Parent=Msa0307820-mRNA-1
chr2_4 three_prime_UTR 962453 963447 962453 ID=Msa0307820-mRNA-1:three_prime_utr;Parent=Msa0307820-mRNA-1
Gene Sequence

>Msa0307820

ATGGAAGGTGGCAAACCTACCATCATCACCAACGCCGAAGGTCAGCGTACCACTCCCTCCGTTGTTGCTTACACCAAGAACGGCGACAGACTCGTCGGTCAGATTGCCAAGCGTCAGGCCGTCGTTAATCCCGAGAACACCTTCTTCTCTGTGAAGAGGTTCATTGGTAGGAAGATGTCTGAGGTTGACGAAGAGTCTAAACAAGTCTCTTACAGAGTCATTAGAGACGATAACGGCAACGTCAAACTCGATTGTCCAGCTATTGGAAAATCATTTGCTGCTGAAGAAATTTCTGCTCAGAGAGTTGTTGATTGGTTGGCTGGAGACTTCAAGAGAGATGAAGGTATAGACCTTTTGAAGGACAAACAAGCTCTTCAGCGTCTTACCGAGACAGCTGAGAAAGCTAAAATGGAGCTTTCATCCCTCACTCAAACAAACATCAGTTTGCCGTTCATAACTGCCACAGCAGATGGCCCCAAACATATTGAGACCACTCTTACAAGGGCTAAATTTGAGGAATTATGTTCAGATCTTCTTGACAGACTCAAGACACCAGTAGAAAATTCATTGAGGGATGCAAAACTCTCAATTAAGGATATTGATGAGGTGATTCTTGTTGGTGGATCAACACGTATCCCTGCTGTTCAGGAGCTTGTAAAGAAGATGACTGGAAAAGACCCAAATGTCACTGTCAATCCAGATGAAGTGGTTGCCCTTGGGGCTGCAGTTCAGGCTGGTGTCTTGGCTGGAGATGTCAGCGACATTGTACTGTTAGATGTTTCTCCATTGTCCTTGGGTTTGGAAACTCTAGGTGGGGTGATGACAAAAATTATTCCCAGAAACACTACCCTTCCCACCTCAAAATCAGAGGTTTTCTCCACCGCTGCTGATGGACAAACCAGTGTAGAAATTAATGTCCTTCAGGGTGAGAGAGAATTTGTTAGGGACAATAAATCTCTTGGTAGCTTCCGCTTGGACGGTATTCCTCCTGCTCCCCGTGGGGTTCCGCAGATTGAAGTGAAGTTCGACATTGATGCAAATGGCATTCTGTCAGTTGCTGCCATAGACAAGGGCACAGGGAAGAAACAGGATATTACCATTACTGGTGCCAGTACCTTGCCTAGTGATGAGGTTGAGAGGATGGTCAATGAGGCTGAGAGATTTTCAAAGGAGGACAAGGAGAAGAGGGATGCAATAGACACAAAGAACCAGGCGGACTCTGTTGTCTACCAGACTGAGAAGCAATTGAAAGAGCTAGGAGAAAAGGTACCTGGCCCTGTGAAAGAAAAGGTGGAAGCAAAGCTGGTAGAGCTTAAAGATGCTATTTCTGGTGGTTCGACCCAAACTATTAAAGATGCCATGGCTGCCCTCAATCAGGAAGTTATGCAGCTTGGACAGTCTCTATATAACCAACCTGGAGCTGCAGATGCAGCAGGACCTACACCACCTGGTAGCGAGTCTGGCCCCTCAGAATCATCATCAGGCAAGGGAGCAGATGGGGATGTGATTGATGCAGATTTTACTGACTCTAAATGA
Protein sequence

>Msa0307820

MEGGKPTIITNAEGQRTTPSVVAYTKNGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSEVDEESKQVSYRVIRDDNGNVKLDCPAIGKSFAAEEISAQRVVDWLAGDFKRDEGIDLLKDKQALQRLTETAEKAKMELSSLTQTNISLPFITATADGPKHIETTLTRAKFEELCSDLLDRLKTPVENSLRDAKLSIKDIDEVILVGGSTRIPAVQELVKKMTGKDPNVTVNPDEVVALGAAVQAGVLAGDVSDIVLLDVSPLSLGLETLGGVMTKIIPRNTTLPTSKSEVFSTAADGQTSVEINVLQGEREFVRDNKSLGSFRLDGIPPAPRGVPQIEVKFDIDANGILSVAAIDKGTGKKQDITITGASTLPSDEVERMVNEAERFSKEDKEKRDAIDTKNQADSVVYQTEKQLKELGEKVPGPVKEKVEAKLVELKDAISGGSTQTIKDAMAALNQEVMQLGQSLYNQPGAADAAGPTPPGSESGPSESSSGKGADGDVIDADFTDSK*