AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0164790

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0164790 MtrunA17_Chr8g0383321 99.690 323 1 0 1 323 1 323 0.0 651
Msa0164790 MtrunA17_Chr1g0201361 71.080 287 81 2 31 316 29 314 2.61e-152 430
Msa0164790 MtrunA17_Chr8g0386871 33.208 265 161 4 50 299 318 581 1.41e-41 152
Msa0164790 MtrunA17_Chr3g0086811 30.747 348 187 7 32 325 5 352 7.63e-39 140
Msa0164790 MtrunA17_Chr6g0463351 35.616 292 149 8 29 285 34 321 8.40e-37 135
Msa0164790 MtrunA17_Chr5g0431531 31.959 291 156 9 49 307 36 316 4.21e-33 124
Msa0164790 MtrunA17_Chr5g0431531 29.688 192 124 4 125 310 31 217 2.30e-16 78.6
Msa0164790 MtrunA17_Chr1g0200171 30.483 269 169 4 47 303 520 782 3.10e-32 127
Msa0164790 MtrunA17_Chr7g0269701 31.164 292 164 9 54 311 24 312 5.58e-26 105
Msa0164790 MtrunA17_Chr7g0219891 30.159 315 177 10 27 304 1 309 7.19e-24 99.8
Msa0164790 MtrunA17_Chr4g0004571 30.714 280 156 11 55 305 22 292 7.43e-24 99.4
Msa0164790 MtrunA17_Chr1g0195101 29.433 282 162 7 64 311 31 309 3.97e-23 97.4
Msa0164790 MtrunA17_Chr1g0149111 27.206 272 180 5 52 305 139 410 6.08e-22 95.5
Msa0164790 MtrunA17_Chr4g0063561 27.076 277 182 6 52 309 123 398 6.80e-22 95.1
Msa0164790 MtrunA17_Chr3g0137941 26.374 273 183 5 54 308 124 396 8.01e-22 95.1
Msa0164790 MtrunA17_Chr3g0137941 30.286 175 103 3 52 207 216 390 2.49e-14 73.2
Msa0164790 MtrunA17_Chr3g0137941 29.747 158 106 3 133 287 122 277 1.22e-13 71.2
Msa0164790 MtrunA17_Chr6g0455381 29.553 291 165 10 54 307 21 308 4.45e-21 92.0
Msa0164790 MtrunA17_Chr7g0252401 28.014 282 172 6 49 305 204 479 1.01e-20 92.4
Msa0164790 MtrunA17_Chr4g0028531 30.508 295 156 11 53 309 23 306 1.40e-20 90.5
Msa0164790 MtrunA17_Chr8g0347451 26.506 332 192 9 1 282 1 330 3.21e-20 90.1
Msa0164790 MtrunA17_Chr8g0347451 28.125 192 124 3 133 310 51 242 9.23e-18 83.2
Msa0164790 MtrunA17_Chr8g0385571 29.032 279 168 7 53 305 228 502 4.80e-20 90.5
Msa0164790 MtrunA17_Chr5g0396801 26.316 342 198 9 11 305 4 338 7.02e-20 89.0
Msa0164790 MtrunA17_Chr5g0396801 29.293 198 126 3 127 310 32 229 2.84e-18 84.3
Msa0164790 MtrunA17_Chr7g0241521 28.470 281 158 8 63 307 28 301 9.15e-20 87.8
Msa0164790 MtrunA17_Chr5g0423111 30.851 282 156 10 64 310 33 310 2.78e-19 87.4
Msa0164790 MtrunA17_Chr4g0000261 26.852 324 190 11 26 309 41 357 5.24e-19 86.7
Msa0164790 MtrunA17_Chr8g0343381 26.797 306 166 9 62 309 43 348 7.11e-19 86.3
Msa0164790 MtrunA17_Chr8g0372531 28.723 282 155 7 66 305 28 305 7.52e-19 85.5
Msa0164790 MtrunA17_Chr2g0331771 31.474 251 145 8 55 281 162 409 3.01e-18 85.1
Msa0164790 MtrunA17_Chr4g0008061 27.143 280 157 8 63 304 26 296 6.45e-18 82.8
Msa0164790 MtrunA17_Chr3g0131501 26.619 278 176 6 53 305 206 480 1.44e-17 83.2
Msa0164790 MtrunA17_Chr3g0131501 28.492 179 105 4 52 207 299 477 1.66e-13 70.9
Msa0164790 MtrunA17_Chr2g0293621 25.362 276 169 8 66 304 43 318 2.69e-17 81.3
Msa0164790 MtrunA17_Chr4g0006851 25.225 222 158 5 87 306 144 359 7.10e-16 77.8
Msa0164790 MtrunA17_Chr4g0006851 27.586 145 93 3 168 308 134 270 5.03e-11 63.2
Msa0164790 MtrunA17_Chr6g0488081 32.178 202 118 6 125 307 10 211 2.58e-15 75.5
Msa0164790 MtrunA17_Chr6g0488081 21.086 313 199 7 34 305 1 306 7.79e-12 65.1
Msa0164790 MtrunA17_Chr6g0488081 26.667 210 108 7 48 220 115 315 1.05e-11 64.7
Msa0164790 MtrunA17_Chr5g0411411 30.500 200 108 5 38 207 96 294 3.53e-15 74.7
Msa0164790 MtrunA17_Chr5g0411411 27.698 278 156 11 43 282 4 274 3.60e-13 68.9
Msa0164790 MtrunA17_Chr5g0411411 29.064 203 125 4 133 316 9 211 1.19e-11 64.7
Msa0164790 MtrunA17_Chr7g0242311 24.481 241 173 6 87 324 142 376 1.52e-14 73.6
Msa0164790 MtrunA17_Chr7g0242311 30.994 171 102 6 149 308 103 268 1.96e-12 67.4
Msa0164790 MtrunA17_Chr4g0067231 23.780 328 185 9 39 305 2 325 3.48e-14 72.4
Msa0164790 MtrunA17_Chr3g0135861 24.116 311 191 8 38 305 21 329 8.11e-14 71.2
Msa0164790 MtrunA17_Chr4g0046981 26.354 277 157 6 49 284 9 279 8.51e-14 70.9
Msa0164790 MtrunA17_Chr4g0046981 26.531 196 128 4 128 308 7 201 1.26e-11 64.3
Msa0164790 MtrunA17_Chr3g0136041 24.510 306 173 8 62 309 42 347 1.01e-13 71.2
Msa0164790 MtrunA17_Chr8g0366791 28.826 281 149 10 43 282 4 274 2.33e-13 69.7
Msa0164790 MtrunA17_Chr8g0366791 31.013 158 97 4 56 207 143 294 3.33e-12 66.2
Msa0164790 MtrunA17_Chr2g0296061 22.045 313 178 7 54 305 17 324 3.67e-13 69.3
Msa0164790 MtrunA17_Chr3g0133111 23.548 310 178 7 53 307 7 312 8.47e-13 68.2
Msa0164790 MtrunA17_Chr3g0103681 26.207 290 178 8 47 303 10 296 1.87e-12 67.0
Msa0164790 MtrunA17_Chr5g0436041 28.713 202 128 4 124 309 25 226 2.12e-12 67.0
Msa0164790 MtrunA17_Chr5g0436041 27.974 311 179 12 36 307 19 323 2.44e-12 66.6
Msa0164790 MtrunA17_Chr7g0240341 28.966 145 97 2 172 310 76 220 2.61e-12 66.6
Msa0164790 MtrunA17_Chr7g0240341 28.261 184 106 4 48 207 130 311 3.71e-12 66.2
Msa0164790 MtrunA17_Chr3g0115801 26.804 194 136 4 132 323 115 304 4.06e-12 66.6
Msa0164790 MtrunA17_Chr1g0196921 22.603 292 166 7 58 304 20 296 2.14e-11 63.9
Msa0164790 MtrunA17_Chr5g0436571 24.919 309 164 9 67 310 23 328 2.32e-11 63.9
Msa0164790 MtrunA17_Chr8g0367641 23.028 317 179 9 50 307 4 314 9.43e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0164790 AT4G39460.2 79.114 316 60 2 1 310 1 316 3.44e-178 496
Msa0164790 AT4G39460.1 79.114 316 60 2 1 310 1 316 3.44e-178 496
Msa0164790 AT4G39460.3 79.114 316 60 2 1 310 1 316 3.44e-178 496
Msa0164790 AT1G34065.1 73.571 280 74 0 29 308 59 338 1.43e-154 437
Msa0164790 AT1G34065.2 73.571 280 74 0 29 308 52 331 3.65e-154 436
Msa0164790 AT4G11440.1 33.696 276 157 5 54 306 332 604 2.23e-41 152
Msa0164790 AT4G11440.2 33.696 276 157 5 54 306 332 604 2.23e-41 152
Msa0164790 AT1G74240.1 34.615 286 140 5 48 286 32 317 3.85e-39 142
Msa0164790 AT1G74240.2 35.075 268 127 5 66 286 2 269 9.91e-37 134
Msa0164790 AT5G42130.1 32.567 261 150 5 66 302 132 390 3.51e-35 132
Msa0164790 AT2G26360.1 30.159 315 182 5 16 293 51 364 6.27e-34 128
Msa0164790 AT1G07030.1 31.930 285 167 6 48 307 36 318 2.03e-32 123
Msa0164790 AT1G07030.1 30.366 191 124 4 125 310 32 218 1.42e-16 79.7
Msa0164790 AT2G35800.1 29.545 264 177 2 48 303 541 803 6.33e-32 126
Msa0164790 AT2G30160.1 31.944 288 166 9 48 307 38 323 1.30e-31 121
Msa0164790 AT2G30160.1 30.055 183 119 4 133 310 42 220 1.60e-14 73.6
Msa0164790 AT3G54110.1 29.617 287 157 8 58 307 21 299 3.49e-24 100
Msa0164790 AT4G32400.1 28.623 276 179 6 52 309 114 389 5.26e-24 101
Msa0164790 AT3G20240.1 27.491 291 169 8 53 305 53 339 2.69e-23 99.0
Msa0164790 AT5G26200.1 26.280 293 171 6 62 309 49 341 1.46e-20 91.3
Msa0164790 AT4G01100.1 26.101 318 186 7 37 305 27 344 2.18e-20 90.9
Msa0164790 AT4G01100.1 30.412 194 117 5 133 310 42 233 1.05e-16 80.1
Msa0164790 AT1G79900.1 28.571 266 168 8 67 314 31 292 4.23e-20 89.4
Msa0164790 AT5G58970.1 27.551 294 177 6 47 307 11 301 5.40e-20 89.0
Msa0164790 AT5G15640.1 28.889 315 181 10 30 306 11 320 1.04e-19 88.6
Msa0164790 AT5G15640.2 28.622 283 164 7 62 306 31 313 1.83e-19 87.8
Msa0164790 AT4G03115.1 28.030 264 163 6 40 279 23 283 5.30e-19 86.3
Msa0164790 AT4G03115.3 28.030 264 163 6 40 279 55 315 6.53e-19 86.7
Msa0164790 AT2G47490.1 28.169 284 166 9 64 313 29 308 6.94e-19 85.9
Msa0164790 AT2G37890.1 27.184 309 188 10 32 305 26 332 2.04e-17 82.0
Msa0164790 AT2G37890.1 30.348 201 124 4 127 311 39 239 3.41e-15 75.9
Msa0164790 AT4G01100.2 25.000 332 186 8 37 305 27 358 2.44e-17 82.4
Msa0164790 AT4G01100.2 27.670 206 121 4 133 310 42 247 1.93e-14 73.9
Msa0164790 AT5G09470.1 26.638 229 157 3 89 307 107 334 3.90e-17 81.3
Msa0164790 AT4G01100.3 26.877 253 151 5 87 305 42 294 5.88e-17 80.5
Msa0164790 AT4G01100.3 31.677 161 97 4 161 310 25 183 4.90e-16 77.8
Msa0164790 AT4G01100.3 28.205 195 99 5 54 207 97 291 3.92e-13 69.3
Msa0164790 AT5G66380.1 28.638 213 131 5 130 326 7 214 7.14e-17 80.1
Msa0164790 AT5G66380.1 27.063 303 181 8 49 313 7 307 2.83e-15 75.5
Msa0164790 AT5G51050.1 29.286 280 163 8 53 305 224 495 9.96e-17 81.3
Msa0164790 AT5G51050.1 29.545 176 103 6 52 207 318 492 1.78e-12 68.2
Msa0164790 AT4G03115.5 29.442 197 131 4 88 279 19 212 1.48e-16 78.2
Msa0164790 AT1G72820.1 26.159 302 169 8 62 309 41 342 1.80e-16 79.7
Msa0164790 AT1G72820.2 26.159 302 169 8 62 309 41 342 1.80e-16 79.7
Msa0164790 AT4G03115.6 29.442 197 131 4 88 279 27 220 2.06e-16 78.2
Msa0164790 AT1G25380.1 29.078 282 162 9 64 310 33 311 3.53e-16 79.0
Msa0164790 AT1G25380.2 29.078 282 162 9 64 310 33 311 3.53e-16 79.0
Msa0164790 AT5G01340.1 28.269 283 160 9 53 299 18 293 2.89e-15 75.5
Msa0164790 AT5G61810.2 28.520 277 168 8 52 306 65 333 1.22e-14 73.9
Msa0164790 AT5G61810.1 28.520 277 168 8 52 306 208 476 1.30e-14 74.7
Msa0164790 AT3G55640.2 30.137 146 95 3 172 310 86 231 2.58e-14 72.0
Msa0164790 AT3G55640.3 30.137 146 95 3 172 310 86 231 2.58e-14 72.0
Msa0164790 AT3G51870.1 25.103 243 171 7 87 325 146 381 4.00e-14 72.8
Msa0164790 AT3G51870.1 28.889 180 98 7 146 307 104 271 1.43e-11 65.1
Msa0164790 AT3G53940.1 26.102 295 176 10 50 306 71 361 4.59e-14 72.8
Msa0164790 AT3G53940.1 29.897 194 113 5 139 311 76 267 3.62e-13 70.1
Msa0164790 AT5G46800.2 28.315 279 156 8 43 282 3 276 5.16e-14 72.0
Msa0164790 AT5G46800.2 29.048 210 127 4 129 316 4 213 2.06e-12 67.0
Msa0164790 AT5G46800.3 28.315 279 156 8 43 282 3 276 5.16e-14 72.0
Msa0164790 AT5G46800.3 29.048 210 127 4 129 316 4 213 2.06e-12 67.0
Msa0164790 AT5G46800.1 28.315 279 156 8 43 282 3 276 5.16e-14 72.0
Msa0164790 AT5G46800.1 29.048 210 127 4 129 316 4 213 2.06e-12 67.0
Msa0164790 AT5G01500.1 27.027 222 154 5 87 306 174 389 6.99e-14 72.4
Msa0164790 AT5G01500.1 30.726 179 98 7 146 308 132 300 2.43e-11 64.7
Msa0164790 AT3G55640.1 30.137 146 95 3 172 310 86 231 1.01e-13 71.2
Msa0164790 AT3G55640.1 29.508 183 107 3 48 208 141 323 1.69e-12 67.8
Msa0164790 AT3G55640.4 30.137 146 95 3 172 310 86 231 1.01e-13 71.2
Msa0164790 AT3G55640.4 29.508 183 107 3 48 208 141 323 1.69e-12 67.8
Msa0164790 AT2G33820.1 26.182 275 164 7 48 285 14 286 1.15e-13 70.9
Msa0164790 AT3G53940.2 29.798 198 116 5 139 315 76 271 1.26e-13 70.5
Msa0164790 AT1G14140.1 25.436 287 180 7 52 306 16 300 1.41e-13 70.9
Msa0164790 AT4G26180.2 28.293 205 127 7 133 318 22 225 3.02e-13 69.7
Msa0164790 AT4G26180.2 23.322 283 176 6 37 280 4 284 1.02e-12 68.2
Msa0164790 AT4G26180.1 28.293 205 127 7 133 318 22 225 4.22e-13 69.7
Msa0164790 AT4G26180.1 23.377 308 195 6 37 305 4 309 5.54e-13 69.3
Msa0164790 AT2G33820.3 25.088 283 165 7 48 285 14 294 7.36e-13 68.6
Msa0164790 AT5G07320.1 27.239 268 167 6 60 306 217 477 7.61e-13 69.3
Msa0164790 AT5G07320.1 29.143 175 104 5 52 207 300 473 2.91e-12 67.8
Msa0164790 AT4G24570.1 25.991 227 158 2 90 307 87 312 1.33e-12 67.8
Msa0164790 AT3G21390.2 24.918 305 169 9 54 299 43 346 2.29e-12 67.4
Msa0164790 AT3G21390.1 24.918 305 169 9 54 299 21 324 2.43e-12 67.4
Msa0164790 AT1G14560.1 25.402 311 176 9 43 305 18 320 8.71e-12 65.5
Msa0164790 AT1G14560.3 27.700 213 106 8 52 221 25 232 2.57e-11 63.2
Msa0164790 AT5G64970.3 28.079 203 137 5 106 302 106 305 6.79e-11 63.2

Find 85 sgRNAs with CRISPR-Local

Find 378 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTAGCAATTTCTGCTTTGC+AGG 0.223057 1_4:-44570490 None:intergenic
TTATTGAAAGGCCTTTATTC+TGG 0.225181 1_4:+44569325 Msa0164790:CDS
GATCCAGAAAATGCAATTAT+TGG 0.242454 1_4:+44571642 Msa0164790:CDS
GCATCTAGGGAGGGCTTTAA+AGG 0.249580 1_4:+44571035 Msa0164790:CDS
ATTCCCTTGTATTGGTTTGC+AGG 0.276596 1_4:-44572504 None:intergenic
TATATTTATTGCAGGGTATT+GGG 0.281623 1_4:+44572736 Msa0164790:intron
AAGATTAAGAATATGATTCT+TGG 0.288865 1_4:+44572889 Msa0164790:exon
TTGTGTTCAAACCATTATTA+AGG 0.295101 1_4:+44572533 Msa0164790:CDS
CTGCAGCACTGAGCTAGTTT+AGG 0.298289 1_4:-44572849 None:intergenic
GACTTCTTACGCACTTTATT+CGG 0.315195 1_4:+44568195 Msa0164790:CDS
TTATATTTATTGCAGGGTAT+TGG 0.325821 1_4:+44572735 Msa0164790:intron
ATAGGTGGTTCAATATTCTT+TGG 0.340105 1_4:+44572780 Msa0164790:CDS
CCGAATACTACAAAACTAGA+TGG 0.342327 1_4:-44572982 None:intergenic
CTCTATGAGCAGATTCGTTT+AGG 0.342765 1_4:+44571231 Msa0164790:CDS
GGATTGGCAGGGAACCTTGC+TGG 0.346162 1_4:+44569346 Msa0164790:CDS
GTCAAGCAACGAATGCAAAC+TGG 0.350543 1_4:+44570975 Msa0164790:CDS
TGGGCCCTCTTCCTTAATAA+TGG 0.357096 1_4:-44572544 None:intergenic
TAGCTTCAAAATCTAGGTCT+TGG 0.362663 1_4:+44573027 Msa0164790:three_prime_UTR
GGCCTTTATTCTGGATTGGC+AGG 0.363354 1_4:+44569334 Msa0164790:CDS
TCCCTGCCAATCCAGAATAA+AGG 0.367538 1_4:-44569336 None:intergenic
AGGGCATCTGCTTTATTTGT+TGG 0.371448 1_4:+44570457 Msa0164790:intron
AATCTACAATTCCCTTGTAT+TGG 0.374693 1_4:-44572512 None:intergenic
ATGTATTCTGCCTGCGGAAA+CGG 0.375941 1_4:-44567326 None:intergenic
TGTCATCAAGACAAGGTTAA+TGG 0.406251 1_4:+44572344 Msa0164790:CDS
TCAAACCATTATTAAGGAAG+AGG 0.421702 1_4:+44572539 Msa0164790:CDS
TATTCTTAGCTTCAAAATCT+AGG 0.423179 1_4:+44573021 Msa0164790:three_prime_UTR
TTTCTTGTAGGCGCACTAAC+CGG 0.426214 1_4:+44572300 Msa0164790:intron
CTGTTCGCTTTATTGCATCT+AGG 0.427767 1_4:+44571021 Msa0164790:CDS
CGCTTTATTGCATCTAGGGA+GGG 0.439283 1_4:+44571026 Msa0164790:CDS
ATGCCTATCCAAAGCACTCT+TGG 0.455630 1_4:-44572759 None:intergenic
TTTAAACTTCCTTAGACTGC+AGG 0.461102 1_4:+44570814 Msa0164790:intron
AGATGCAGCAATGCCTCCTA+TGG 0.462674 1_4:-44570839 None:intergenic
CCTTAGACTGCAGGTGCCAT+AGG 0.468200 1_4:+44570823 Msa0164790:intron
TCCTCTTACACTCTCCGTTA+CGG 0.470847 1_4:+44567376 Msa0164790:CDS
TGTATTCTGCCTGCGGAAAC+GGG 0.473681 1_4:-44567325 None:intergenic
TGTTCGCTTTATTGCATCTA+GGG 0.478843 1_4:+44571022 Msa0164790:CDS
GAGAATTAAGCAACCTCTGT+TGG 0.484810 1_4:-44570874 None:intergenic
GAAAGGCCTTTATTCTGGAT+TGG 0.486028 1_4:+44569330 Msa0164790:CDS
GTATTGGGCCAAGAGTGCTT+TGG 0.489705 1_4:+44572751 Msa0164790:CDS
CAAGACAAGGTTAATGGTCC+AGG 0.493486 1_4:+44572350 Msa0164790:CDS
TATTTCCAATCACAGGGGTA+TGG 0.494820 1_4:+44571162 Msa0164790:intron
AAAGTGCGTAAGAAGTCAAA+TGG 0.506329 1_4:-44568189 None:intergenic
ATTATTAAGGAAGAGGGCCC+AGG 0.516548 1_4:+44572546 Msa0164790:CDS
GTTATCGCAGGAGGTACAGC+TGG 0.521468 1_4:+44568792 Msa0164790:CDS
TGTACAATGTATTACCCCTC+TGG 0.532453 1_4:+44572941 Msa0164790:three_prime_UTR
TCAAAATCTAGGTCTTGGAT+TGG 0.533368 1_4:+44573032 Msa0164790:three_prime_UTR
CAAACCATTATTAAGGAAGA+GGG 0.542176 1_4:+44572540 Msa0164790:CDS
AAGTGGTGTAGTTATAGCTC+CGG 0.542614 1_4:-44572319 None:intergenic
GGGCCAAGAGTGCTTTGGAT+AGG 0.546598 1_4:+44572756 Msa0164790:CDS
CGAATACTACAAAACTAGAT+GGG 0.558824 1_4:-44572981 None:intergenic
TATGCAGAGGGTGTTATCGC+AGG 0.559305 1_4:+44568780 Msa0164790:intron
TCAAGCAACGAATGCAAACT+GGG 0.559945 1_4:+44570976 Msa0164790:CDS
GGGACCTGCAAACCAATACA+AGG 0.561092 1_4:+44572500 Msa0164790:intron
ACGGTGCAAGATTCTGCCTC+CGG 0.561209 1_4:+44567395 Msa0164790:CDS
TCGTTTAGGTTATATGCTTG+CGG 0.564520 1_4:+44571245 Msa0164790:CDS
GCAAAACTGAATAGCATCGA+AGG 0.569103 1_4:-44571208 None:intergenic
GGCAGAATCTTGCACCGTAA+CGG 0.574358 1_4:-44567390 None:intergenic
TCGCTTTATTGCATCTAGGG+AGG 0.574800 1_4:+44571025 Msa0164790:CDS
AGATAACAACCCGTTTCCGC+AGG 0.574858 1_4:+44567316 Msa0164790:five_prime_UTR
TAGACTGCAGGTGCCATAGG+AGG 0.585629 1_4:+44570826 Msa0164790:intron
GCCTTTATTCTGGATTGGCA+GGG 0.591598 1_4:+44569335 Msa0164790:CDS
TTTAGGTGTAGGACGCCTCT+CGG 0.591628 1_4:-44572832 None:intergenic
GAGCCATCACTGAACAAAAG+AGG 0.599207 1_4:-44567355 None:intergenic
GTGTAGGACGCCTCTCGGCA+AGG 0.600855 1_4:-44572827 None:intergenic
AGAGTGCTTTGGATAGGCAT+AGG 0.606452 1_4:+44572762 Msa0164790:CDS
CTGCAAAGCAGAAATTGCTA+AGG 0.608222 1_4:+44570491 Msa0164790:CDS
ACCGTAACGGAGAGTGTAAG+AGG 0.610387 1_4:-44567377 None:intergenic
CTAAACGAATCTGCTCATAG+AGG 0.612392 1_4:-44571230 None:intergenic
TACATTTCGAATTAACCAGA+GGG 0.615797 1_4:-44572956 None:intergenic
GCGAACAGCATTAGAAGCTG+AGG 0.620160 1_4:-44571006 None:intergenic
CACTTGATGTCATCAAGACA+AGG 0.621719 1_4:+44572337 Msa0164790:CDS
GAGGGGTAATACATTGTACA+CGG 0.631402 1_4:-44572938 None:intergenic
CACTGAGCTAGTTTAGGTGT+AGG 0.633466 1_4:-44572843 None:intergenic
CATACCTTCAGAAAAGCACC+TGG 0.639866 1_4:-44572564 None:intergenic
CAAAACTGAATAGCATCGAA+GGG 0.640886 1_4:-44571207 None:intergenic
GTGCTTTGGATAGGCATAGG+TGG 0.648337 1_4:+44572765 Msa0164790:CDS
CAAAACGTTTCCTTGCCGAG+AGG 0.661791 1_4:+44572817 Msa0164790:CDS
CTTGTCTTGATGACATCAAG+TGG 0.662260 1_4:-44572336 None:intergenic
GCAGAGGGTGTTATCGCAGG+AGG 0.664121 1_4:+44568783 Msa0164790:intron
ATACATTTCGAATTAACCAG+AGG 0.673284 1_4:-44572957 None:intergenic
AGGGGTAATACATTGTACAC+GGG 0.699598 1_4:-44572937 None:intergenic
GGACCTGCAAACCAATACAA+GGG 0.705803 1_4:+44572501 Msa0164790:CDS
CTCACGGTAAGACACCAGCA+AGG 0.720656 1_4:-44569360 None:intergenic
ATACCTTCAGAAAAGCACCT+GGG 0.748450 1_4:-44572563 None:intergenic
ACATTTCGAATTAACCAGAG+GGG 0.749171 1_4:-44572955 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTAAAATTGATATTTCTA+TGG + chr1_4:44570901-44570920 Msa0164790:intron 10.0%
!!! TTCTATTTTTATGTATTTTA+AGG + chr1_4:44571281-44571300 Msa0164790:intron 10.0%
!! TTATACTATCTAATCTATAT+GGG - chr1_4:44567784-44567803 None:intergenic 15.0%
!! TTTATACTATCTAATCTATA+TGG - chr1_4:44567785-44567804 None:intergenic 15.0%
!! AAATAAAATACACATATGAA+GGG - chr1_4:44568391-44568410 None:intergenic 15.0%
!! AAAATAAAATACACATATGA+AGG - chr1_4:44568392-44568411 None:intergenic 15.0%
!!! GAAAATAAACCTATATTTTT+TGG + chr1_4:44569027-44569046 Msa0164790:intron 15.0%
!! AATATGATTTATCTAATTCT+TGG + chr1_4:44569530-44569549 Msa0164790:intron 15.0%
!! TAACAAATATATGGAAATTA+AGG - chr1_4:44569583-44569602 None:intergenic 15.0%
!!! ATATTTGTTGATATTGATAT+AGG + chr1_4:44569642-44569661 Msa0164790:intron 15.0%
!!! TCCTTATATTAAATTTTGTT+TGG + chr1_4:44570238-44570257 Msa0164790:intron 15.0%
!! TCCAAACAAAATTTAATATA+AGG - chr1_4:44570242-44570261 None:intergenic 15.0%
!! TATTTCACAAATTATTTAAG+CGG + chr1_4:44570341-44570360 Msa0164790:intron 15.0%
!!! AAAATGCTTTAGAATTTTTA+TGG + chr1_4:44570769-44570788 Msa0164790:intron 15.0%
!!! AAATGCTTTAGAATTTTTAT+GGG + chr1_4:44570770-44570789 Msa0164790:intron 15.0%
!!! ATTTTGTTTAAATGTTTCTT+TGG + chr1_4:44571133-44571152 Msa0164790:intron 15.0%
!! TCTTTAAACATTAATTCATA+AGG - chr1_4:44571779-44571798 None:intergenic 15.0%
!!! TTTAATTAAGATCTAGAATT+AGG - chr1_4:44571939-44571958 None:intergenic 15.0%
!! CAAAAAATTACAAATAGAAA+TGG - chr1_4:44572142-44572161 None:intergenic 15.0%
!!! TTTCTATTTGTAATTTTTTG+TGG + chr1_4:44572142-44572161 Msa0164790:intron 15.0%
!!! AAATGATCATTTCTTTATTT+TGG + chr1_4:44572209-44572228 Msa0164790:intron 15.0%
!! ATATTCTTATATTTATTGCA+GGG + chr1_4:44572729-44572748 Msa0164790:intron 15.0%
!! ACTGTCAATAATCAATAATA+TGG - chr1_4:44567925-44567944 None:intergenic 20.0%
!!! CATCATTTTAACAGATTATA+TGG + chr1_4:44568084-44568103 Msa0164790:intron 20.0%
!!! TATTTTATTTTTCGACTGTA+AGG + chr1_4:44568401-44568420 Msa0164790:intron 20.0%
!! GATATTTAAACACAATCTAA+GGG - chr1_4:44568687-44568706 None:intergenic 20.0%
!! TGATATTTAAACACAATCTA+AGG - chr1_4:44568688-44568707 None:intergenic 20.0%
!! ACAAATTATAATGACTATTG+AGG + chr1_4:44568888-44568907 Msa0164790:intron 20.0%
!! CAAATTATAATGACTATTGA+GGG + chr1_4:44568889-44568908 Msa0164790:intron 20.0%
!!! ACAATAGCAATTTTTTTTGT+TGG + chr1_4:44569070-44569089 Msa0164790:intron 20.0%
!!! TTAAGTTTTTGATATTTCCA+TGG + chr1_4:44569203-44569222 Msa0164790:intron 20.0%
!!! TCCCATTTTTTTTACATAAA+AGG + chr1_4:44569248-44569267 Msa0164790:intron 20.0%
!!! GCCTTTTATGTAAAAAAAAT+GGG - chr1_4:44569252-44569271 None:intergenic 20.0%
!!! ATGTTTGTTTTTGTTTTGTT+AGG + chr1_4:44569279-44569298 Msa0164790:intron 20.0%
!! AAATATATGGAAATTAAGGT+TGG - chr1_4:44569579-44569598 None:intergenic 20.0%
!!! CAGTTGTTTTAACAAATATA+TGG - chr1_4:44569592-44569611 None:intergenic 20.0%
!!! CATATATTTGTTAAAACAAC+TGG + chr1_4:44569590-44569609 Msa0164790:intron 20.0%
!! ATATTATCATCATAATTTCC+AGG - chr1_4:44569626-44569645 None:intergenic 20.0%
!!! TATAGCATGAACTATTTTAT+GGG - chr1_4:44569803-44569822 None:intergenic 20.0%
!!! TTATAGCATGAACTATTTTA+TGG - chr1_4:44569804-44569823 None:intergenic 20.0%
!!! AACACCAACTATTAAATTTT+TGG + chr1_4:44570209-44570228 Msa0164790:intron 20.0%
!! CAAAATTTAATATAAGGAGA+GGG - chr1_4:44570236-44570255 None:intergenic 20.0%
!! ACAAAATTTAATATAAGGAG+AGG - chr1_4:44570237-44570256 None:intergenic 20.0%
!! TTGATTCATGAATCATATAT+AGG + chr1_4:44570397-44570416 Msa0164790:intron 20.0%
!! GTTACTACTTATGTTTATAT+AGG - chr1_4:44570564-44570583 None:intergenic 20.0%
!! AAATATCAAAAGAAAGAGAT+GGG - chr1_4:44571082-44571101 None:intergenic 20.0%
!! AAAATATCAAAAGAAAGAGA+TGG - chr1_4:44571083-44571102 None:intergenic 20.0%
!! ACATTTAAACAAAATATCAC+AGG - chr1_4:44571128-44571147 None:intergenic 20.0%
!! AATTAATGTTTAAAGATGTG+TGG + chr1_4:44571783-44571802 Msa0164790:intron 20.0%
!! TAGCAAATATATCTTCATTT+AGG - chr1_4:44572100-44572119 None:intergenic 20.0%
!!! TATTTGTAATTTTTTGTGGA+TGG + chr1_4:44572146-44572165 Msa0164790:intron 20.0%
!! CATATTCTTATATTTATTGC+AGG + chr1_4:44572728-44572747 Msa0164790:intron 20.0%
!! AAGATTAAGAATATGATTCT+TGG + chr1_4:44572889-44572908 Msa0164790:exon 20.0%
!!! TTAACTTTTGTTATAGCAGT+AGG - chr1_4:44567541-44567560 None:intergenic 25.0%
! ATTAATTCTCTCGTGAATAT+AGG - chr1_4:44567718-44567737 None:intergenic 25.0%
! AGAATTAATCTCAATAGTGT+TGG + chr1_4:44567729-44567748 Msa0164790:intron 25.0%
! GAATTAATCTCAATAGTGTT+GGG + chr1_4:44567730-44567749 Msa0164790:intron 25.0%
! GCACAATATAAAAACCTAAT+AGG + chr1_4:44567875-44567894 Msa0164790:intron 25.0%
!! TTATTGATTATTGACAGTCA+AGG + chr1_4:44567927-44567946 Msa0164790:intron 25.0%
!! TTCTATTCTTTTAATGACTG+AGG + chr1_4:44568488-44568507 Msa0164790:intron 25.0%
!!! TATTATGGTTACCCTTTTTT+AGG + chr1_4:44568515-44568534 Msa0164790:intron 25.0%
!! ACATTGGCTATTACTTATTA+CGG - chr1_4:44568954-44568973 None:intergenic 25.0%
!!! AGCAATTTTTTTTGTTGGAT+AGG + chr1_4:44569075-44569094 Msa0164790:intron 25.0%
! ACATATTAAATCTTGACGAT+TGG - chr1_4:44569132-44569151 None:intergenic 25.0%
!! AGTTGATTTACATAGTATAG+TGG + chr1_4:44569163-44569182 Msa0164790:intron 25.0%
!! CGCCTTTTATGTAAAAAAAA+TGG - chr1_4:44569253-44569272 None:intergenic 25.0%
! GGAGAAAAACTATTATTGAA+AGG + chr1_4:44569313-44569332 Msa0164790:CDS 25.0%
! TTGATACTTCTTACAATCTA+TGG + chr1_4:44570111-44570130 Msa0164790:intron 25.0%
!! ATGTTCTGATTTTACAAAAG+AGG + chr1_4:44570171-44570190 Msa0164790:intron 25.0%
!! TGTTCTGATTTTACAAAAGA+GGG + chr1_4:44570172-44570191 Msa0164790:intron 25.0%
!!! TGTATTACTTTTAAATGTGC+AGG + chr1_4:44570437-44570456 Msa0164790:intron 25.0%
!!! GTATTACTTTTAAATGTGCA+GGG + chr1_4:44570438-44570457 Msa0164790:intron 25.0%
! AATATCAAAAGAAAGAGATG+GGG - chr1_4:44571081-44571100 None:intergenic 25.0%
! TATTGATATTTCCAATCACA+GGG + chr1_4:44571156-44571175 Msa0164790:intron 25.0%
! TTTAAGGACTTGATTTCATT+TGG + chr1_4:44571297-44571316 Msa0164790:intron 25.0%
! AAGAATTCATATCAACATGT+AGG + chr1_4:44571504-44571523 Msa0164790:intron 25.0%
!! GATTTGTATTTCTTTTTGCT+AGG + chr1_4:44571602-44571621 Msa0164790:intron 25.0%
! AGGTGAATAAATGACATTAT+AGG + chr1_4:44571674-44571693 Msa0164790:intron 25.0%
!!! TAAGATTCAAGGTTTTGATT+CGG - chr1_4:44571835-44571854 None:intergenic 25.0%
! TCAAGCTATATTTCTTTACA+AGG + chr1_4:44571860-44571879 Msa0164790:intron 25.0%
! TAAACAATGAAGAAATCAGT+AGG + chr1_4:44571955-44571974 Msa0164790:intron 25.0%
!!! AAATAGGTTTTTCGGTAATT+AGG + chr1_4:44572174-44572193 Msa0164790:intron 25.0%
! TTGTGTTCAAACCATTATTA+AGG + chr1_4:44572533-44572552 Msa0164790:CDS 25.0%
! AAAATATATTTCTTGCCATG+TGG - chr1_4:44572689-44572708 None:intergenic 25.0%
!! ACATGGCAAGAAATATATTT+TGG + chr1_4:44572688-44572707 Msa0164790:intron 25.0%
! TTATATTTATTGCAGGGTAT+TGG + chr1_4:44572735-44572754 Msa0164790:intron 25.0%
!! TATATTTATTGCAGGGTATT+GGG + chr1_4:44572736-44572755 Msa0164790:intron 25.0%
!!! GAATATGATTCTTGGTTTTA+TGG + chr1_4:44572897-44572916 Msa0164790:three_prime_UTR 25.0%
! TATTCTTAGCTTCAAAATCT+AGG + chr1_4:44573021-44573040 Msa0164790:three_prime_UTR 25.0%
TAAGTTGTTTATCGAAACAG+AGG - chr1_4:44567499-44567518 None:intergenic 30.0%
TCGAAAAATAGCTTATTGCT+GGG - chr1_4:44567571-44567590 None:intergenic 30.0%
ATCGAAAAATAGCTTATTGC+TGG - chr1_4:44567572-44567591 None:intergenic 30.0%
TATCTAATCTATATGGGACT+TGG - chr1_4:44567778-44567797 None:intergenic 30.0%
! GATTTGCTCTTATTCCTATT+AGG - chr1_4:44567892-44567911 None:intergenic 30.0%
ATTATTGACAGTCAAGGAAA+AGG + chr1_4:44567933-44567952 Msa0164790:intron 30.0%
AATGACTGAGGACATTATTA+TGG + chr1_4:44568500-44568519 Msa0164790:intron 30.0%
ATAAAGAAAGCAACCATTTG+AGG - chr1_4:44568541-44568560 None:intergenic 30.0%
! TCAAATGGTTGCTTTCTTTA+TGG + chr1_4:44568540-44568559 Msa0164790:intron 30.0%
TTCACTGCATATATGAATGA+GGG - chr1_4:44568649-44568668 None:intergenic 30.0%
TCATATATGCAGTGAAGAAT+TGG + chr1_4:44568653-44568672 Msa0164790:intron 30.0%
!! GTGTTTTTATAGTGTCAATG+GGG - chr1_4:44568842-44568861 None:intergenic 30.0%
!! CGTGTTTTTATAGTGTCAAT+GGG - chr1_4:44568843-44568862 None:intergenic 30.0%
!! ACGTGTTTTTATAGTGTCAA+TGG - chr1_4:44568844-44568863 None:intergenic 30.0%
GTAATAAGTAATAGCCAATG+TGG + chr1_4:44568953-44568972 Msa0164790:intron 30.0%
CTCGTCTTTCCAAAAAATAT+AGG - chr1_4:44569039-44569058 None:intergenic 30.0%
!!! CTATATTTTTTGGAAAGACG+AGG + chr1_4:44569037-44569056 Msa0164790:intron 30.0%
!! CAAAAACTTAACACTGATTC+AGG - chr1_4:44569194-44569213 None:intergenic 30.0%
TTATTGAAAGGCCTTTATTC+TGG + chr1_4:44569325-44569344 Msa0164790:CDS 30.0%
CATGATGTTTCAAACATTCT+AGG + chr1_4:44569397-44569416 Msa0164790:intron 30.0%
AAAAGTTATTGGCAAGCATA+GGG + chr1_4:44569468-44569487 Msa0164790:intron 30.0%
CATAGTATACAACTTTCAGT+AGG + chr1_4:44569501-44569520 Msa0164790:intron 30.0%
! ATATGGAAATTAAGGTTGGT+GGG - chr1_4:44569575-44569594 None:intergenic 30.0%
TATATGGAAATTAAGGTTGG+TGG - chr1_4:44569576-44569595 None:intergenic 30.0%
TTTGTTAAAACAACTGGAGT+TGG + chr1_4:44569596-44569615 Msa0164790:intron 30.0%
TTGTTAAAACAACTGGAGTT+GGG + chr1_4:44569597-44569616 Msa0164790:intron 30.0%
ATGTAAAACTCCATCATATC+GGG - chr1_4:44569717-44569736 None:intergenic 30.0%
GATGTAAAACTCCATCATAT+CGG - chr1_4:44569718-44569737 None:intergenic 30.0%
TAGGCAAATTCTATGTAAGT+AGG - chr1_4:44569740-44569759 None:intergenic 30.0%
AGGCATATGATGTTTCAAAT+AGG - chr1_4:44569759-44569778 None:intergenic 30.0%
!!! AACATCATATGCCTCTTTTT+TGG + chr1_4:44569765-44569784 Msa0164790:intron 30.0%
!!! ACATCATATGCCTCTTTTTT+GGG + chr1_4:44569766-44569785 Msa0164790:intron 30.0%
! GAACTATTTTATGGGTAAGA+TGG - chr1_4:44569795-44569814 None:intergenic 30.0%
TGACAATGTGTTTATAAGTG+GGG - chr1_4:44569923-44569942 None:intergenic 30.0%
CTGACAATGTGTTTATAAGT+GGG - chr1_4:44569924-44569943 None:intergenic 30.0%
AACATAGACAGGATAATTTC+AGG - chr1_4:44570000-44570019 None:intergenic 30.0%
GTCCTTAAGTTTGTACTTTA+AGG + chr1_4:44570029-44570048 Msa0164790:intron 30.0%
GGATCACTTAGCTATATATA+TGG + chr1_4:44570132-44570151 Msa0164790:intron 30.0%
TAGCTATATATATGGTTGTC+TGG + chr1_4:44570140-44570159 Msa0164790:intron 30.0%
! GTTCTGATTTTACAAAAGAG+GGG + chr1_4:44570173-44570192 Msa0164790:intron 30.0%
GGGTCCAAAAATTTAATAGT+TGG - chr1_4:44570216-44570235 None:intergenic 30.0%
! TGAGTTGAAGTGTTAAGTAT+GGG - chr1_4:44570619-44570638 None:intergenic 30.0%
!! TTGAGTTGAAGTGTTAAGTA+TGG - chr1_4:44570620-44570639 None:intergenic 30.0%
! TGTTATCATTCTTTTGTTGC+TGG + chr1_4:44570728-44570747 Msa0164790:intron 30.0%
ATGGTTGAAAACTGTTTCAT+TGG + chr1_4:44570920-44570939 Msa0164790:intron 30.0%
TGGTTGAAAACTGTTTCATT+GGG + chr1_4:44570921-44570940 Msa0164790:intron 30.0%
TAAACAAAATATCACAGGTG+CGG - chr1_4:44571123-44571142 None:intergenic 30.0%
! GTATTGATATTTCCAATCAC+AGG + chr1_4:44571155-44571174 Msa0164790:intron 30.0%
ATTGATATTTCCAATCACAG+GGG + chr1_4:44571157-44571176 Msa0164790:intron 30.0%
AAATATCACAATAGTGGCTT+GGG - chr1_4:44571337-44571356 None:intergenic 30.0%
TGATATTTCGTTGCTAAGAA+TGG + chr1_4:44571349-44571368 Msa0164790:intron 30.0%
!! ATAACTTTTGTTTGCCAGAA+AGG - chr1_4:44571390-44571409 None:intergenic 30.0%
ACATGTAGGAAATACCTATT+TGG + chr1_4:44571518-44571537 Msa0164790:intron 30.0%
CATGTAGGAAATACCTATTT+GGG + chr1_4:44571519-44571538 Msa0164790:intron 30.0%
ATGTAGGAAATACCTATTTG+GGG + chr1_4:44571520-44571539 Msa0164790:intron 30.0%
ATCTTTGATAAACCCCAAAT+AGG - chr1_4:44571535-44571554 None:intergenic 30.0%
GATCCAGAAAATGCAATTAT+TGG + chr1_4:44571642-44571661 Msa0164790:CDS 30.0%
GCTTGACAAAATAAGATTCA+AGG - chr1_4:44571846-44571865 None:intergenic 30.0%
!!! TGTAATTTTTTGTGGATGGT+AGG + chr1_4:44572150-44572169 Msa0164790:intron 30.0%
! TGGTAGGTAAATAGGTTTTT+CGG + chr1_4:44572166-44572185 Msa0164790:intron 30.0%
!! TGTTGCTTTGTTAAGCATTA+TGG + chr1_4:44572239-44572258 Msa0164790:intron 30.0%
TATGTGTATCAGGTAAAAAC+AGG - chr1_4:44572387-44572406 None:intergenic 30.0%
AATCTACAATTCCCTTGTAT+TGG - chr1_4:44572515-44572534 None:intergenic 30.0%
TCAAACCATTATTAAGGAAG+AGG + chr1_4:44572539-44572558 Msa0164790:CDS 30.0%
CAAACCATTATTAAGGAAGA+GGG + chr1_4:44572540-44572559 Msa0164790:CDS 30.0%
AAATTATGTTCTACAGCCTT+GGG + chr1_4:44572644-44572663 Msa0164790:intron 30.0%
ATAGGTGGTTCAATATTCTT+TGG + chr1_4:44572780-44572799 Msa0164790:CDS 30.0%
TACATTTCGAATTAACCAGA+GGG - chr1_4:44572959-44572978 None:intergenic 30.0%
ATACATTTCGAATTAACCAG+AGG - chr1_4:44572960-44572979 None:intergenic 30.0%
CGAATACTACAAAACTAGAT+GGG - chr1_4:44572984-44573003 None:intergenic 30.0%
!!! CCATCTAGTTTTGTAGTATT+CGG + chr1_4:44572982-44573001 Msa0164790:three_prime_UTR 30.0%
!!! CATCTAGTTTTGTAGTATTC+GGG + chr1_4:44572983-44573002 Msa0164790:three_prime_UTR 30.0%
! TTTTGAATGTATTCTGCCTG+CGG - chr1_4:44567335-44567354 None:intergenic 35.0%
! AAACCTCTTTTGTTCAGTGA+TGG + chr1_4:44567352-44567371 Msa0164790:exon 35.0%
TGAAGTGATGTGAAACATAC+CGG - chr1_4:44567417-44567436 None:intergenic 35.0%
ATCGAAACATGTGCATAAGT+TGG - chr1_4:44567618-44567637 None:intergenic 35.0%
TCAATGAGTCAATCCAAACA+CGG + chr1_4:44567692-44567711 Msa0164790:intron 35.0%
! TTCTTTTGCATCTGTTAGTG+TGG + chr1_4:44568155-44568174 Msa0164790:CDS 35.0%
! TCTTTTGCATCTGTTAGTGT+GGG + chr1_4:44568156-44568175 Msa0164790:CDS 35.0%
AAAGTGCGTAAGAAGTCAAA+TGG - chr1_4:44568192-44568211 None:intergenic 35.0%
GACTTCTTACGCACTTTATT+CGG + chr1_4:44568195-44568214 Msa0164790:CDS 35.0%
! TCGCTTTGATAGCAGAAAAA+TGG - chr1_4:44568266-44568285 None:intergenic 35.0%
TTTCTGCTATCAAAGCGAAA+AGG + chr1_4:44568268-44568287 Msa0164790:intron 35.0%
! ACCATTTGAGGCCTAAAAAA+GGG - chr1_4:44568529-44568548 None:intergenic 35.0%
! AACCATTTGAGGCCTAAAAA+AGG - chr1_4:44568530-44568549 None:intergenic 35.0%
TTTAGCCCTATTTGAGTAGA+AGG + chr1_4:44568593-44568612 Msa0164790:intron 35.0%
ATATATGAATGAGGGATTGG+GGG - chr1_4:44568641-44568660 None:intergenic 35.0%
CATATATGAATGAGGGATTG+GGG - chr1_4:44568642-44568661 None:intergenic 35.0%
GCATATATGAATGAGGGATT+GGG - chr1_4:44568643-44568662 None:intergenic 35.0%
TGCATATATGAATGAGGGAT+TGG - chr1_4:44568644-44568663 None:intergenic 35.0%
CTTCACTGCATATATGAATG+AGG - chr1_4:44568650-44568669 None:intergenic 35.0%
!! TTTTGGAAAGACGAGGAAAA+AGG + chr1_4:44569044-44569063 Msa0164790:intron 35.0%
AGTCCTCTGCTATTAAGAAA+AGG - chr1_4:44569229-44569248 None:intergenic 35.0%
CGAAAGAAGCCAAAAGTTAT+TGG + chr1_4:44569457-44569476 Msa0164790:intron 35.0%
! CTATGCTTGCCAATAACTTT+TGG - chr1_4:44569469-44569488 None:intergenic 35.0%
CAAAAGTTATTGGCAAGCAT+AGG + chr1_4:44569467-44569486 Msa0164790:intron 35.0%
ACAGATTAAGAACTCCTTGT+TGG + chr1_4:44569671-44569690 Msa0164790:intron 35.0%
GTATCAATAAGTCTCCAACA+AGG - chr1_4:44569688-44569707 None:intergenic 35.0%
!!! CATCATATGCCTCTTTTTTG+GGG + chr1_4:44569767-44569786 Msa0164790:intron 35.0%
GACAATGTGTTTATAAGTGG+GGG - chr1_4:44569922-44569941 None:intergenic 35.0%
CCTGACAATGTGTTTATAAG+TGG - chr1_4:44569925-44569944 None:intergenic 35.0%
CCACTTATAAACACATTGTC+AGG + chr1_4:44569922-44569941 Msa0164790:intron 35.0%
ACTATTAAAGAGTCCCACAT+CGG - chr1_4:44569959-44569978 None:intergenic 35.0%
ATTATCCTGTCTATGTTTCG+TGG + chr1_4:44570003-44570022 Msa0164790:intron 35.0%
CGCCTTAAAGTACAAACTTA+AGG - chr1_4:44570034-44570053 None:intergenic 35.0%
!! TGTACTTTAAGGCGTAGTAA+TGG + chr1_4:44570040-44570059 Msa0164790:intron 35.0%
! AGTATGGGACTTGTTCTAAA+GGG - chr1_4:44570604-44570623 None:intergenic 35.0%
! AAGTATGGGACTTGTTCTAA+AGG - chr1_4:44570605-44570624 None:intergenic 35.0%
!! TTGCTTTAAAGTCGTAAGTC+TGG + chr1_4:44570648-44570667 Msa0164790:intron 35.0%
TCTGGCTAATTATGGTTATG+TGG + chr1_4:44570666-44570685 Msa0164790:intron 35.0%
TCCAATACAAGCCAAATAGA+TGG - chr1_4:44570694-44570713 None:intergenic 35.0%
TTTAAACTTCCTTAGACTGC+AGG + chr1_4:44570814-44570833 Msa0164790:intron 35.0%
! TGTTCGCTTTATTGCATCTA+GGG + chr1_4:44571022-44571041 Msa0164790:CDS 35.0%
AAACAAAATATCACAGGTGC+GGG - chr1_4:44571122-44571141 None:intergenic 35.0%
!!! GGTATGGATCTTTTTTACTG+CGG + chr1_4:44571178-44571197 Msa0164790:CDS 35.0%
!!! GTATGGATCTTTTTTACTGC+GGG + chr1_4:44571179-44571198 Msa0164790:CDS 35.0%
! CAAAACTGAATAGCATCGAA+GGG - chr1_4:44571210-44571229 None:intergenic 35.0%
! TCGTTTAGGTTATATGCTTG+CGG + chr1_4:44571245-44571264 Msa0164790:CDS 35.0%
GAAATATCACAATAGTGGCT+TGG - chr1_4:44571338-44571357 None:intergenic 35.0%
GCAACGAAATATCACAATAG+TGG - chr1_4:44571343-44571362 None:intergenic 35.0%
GCAAGCATAATTTAGTAGCA+TGG + chr1_4:44571457-44571476 Msa0164790:intron 35.0%
AATTTAGTAGCATGGATTCG+AGG + chr1_4:44571465-44571484 Msa0164790:intron 35.0%
! GCACCAATAATTGCATTTTC+TGG - chr1_4:44571648-44571667 None:intergenic 35.0%
ACAGTTAAAGCATAAGCTCA+TGG - chr1_4:44571740-44571759 None:intergenic 35.0%
!! TTGATTCGGCAGAGTAAATA+CGG - chr1_4:44571821-44571840 None:intergenic 35.0%
TTTGTGGATGGTAGGTAAAT+AGG + chr1_4:44572158-44572177 Msa0164790:intron 35.0%
TGTCATCAAGACAAGGTTAA+TGG + chr1_4:44572344-44572363 Msa0164790:CDS 35.0%
AAACAGGACTAAATCTTACC+TGG - chr1_4:44572371-44572390 None:intergenic 35.0%
TAGGAACTTCGTAAATGAGT+GGG - chr1_4:44572464-44572483 None:intergenic 35.0%
ATAGGAACTTCGTAAATGAG+TGG - chr1_4:44572465-44572484 None:intergenic 35.0%
CAAATTATGTTCTACAGCCT+TGG + chr1_4:44572643-44572662 Msa0164790:intron 35.0%
TATCTTTCTGAATTTGCCCA+AGG - chr1_4:44572663-44572682 None:intergenic 35.0%
ACATTTCGAATTAACCAGAG+GGG - chr1_4:44572958-44572977 None:intergenic 35.0%
CCGAATACTACAAAACTAGA+TGG - chr1_4:44572985-44573004 None:intergenic 35.0%
TAGCTTCAAAATCTAGGTCT+TGG + chr1_4:44573027-44573046 Msa0164790:three_prime_UTR 35.0%
TCAAAATCTAGGTCTTGGAT+TGG + chr1_4:44573032-44573051 Msa0164790:three_prime_UTR 35.0%
!! GGGTTTTGTAAGGATGACTT+AGG + chr1_4:44567853-44567872 Msa0164790:intron 40.0%
! CTTTTGCATCTGTTAGTGTG+GGG + chr1_4:44568157-44568176 Msa0164790:CDS 40.0%
!!! ACCCTTTTTTAGGCCTCAAA+TGG + chr1_4:44568525-44568544 Msa0164790:intron 40.0%
GTCAGCCTTCTACTCAAATA+GGG - chr1_4:44568601-44568620 None:intergenic 40.0%
AATCTTGCTAACGAGCTTGA+TGG + chr1_4:44568754-44568773 Msa0164790:intron 40.0%
AGCTTGATGGAATTATGCAG+AGG + chr1_4:44568767-44568786 Msa0164790:intron 40.0%
GCTTGATGGAATTATGCAGA+GGG + chr1_4:44568768-44568787 Msa0164790:intron 40.0%
CACTATAAAAACACGTCTGC+AGG + chr1_4:44568848-44568867 Msa0164790:CDS 40.0%
TAGAGGCTTGATATCCACAT+TGG - chr1_4:44568970-44568989 None:intergenic 40.0%
CTGCTATTAAGAAAAGGCCA+TGG - chr1_4:44569223-44569242 None:intergenic 40.0%
! TGGCCTTTTCTTAATAGCAG+AGG + chr1_4:44569223-44569242 Msa0164790:intron 40.0%
GAAAGGCCTTTATTCTGGAT+TGG + chr1_4:44569330-44569349 Msa0164790:CDS 40.0%
AAGATGGAACCCCAAAAAAG+AGG - chr1_4:44569779-44569798 None:intergenic 40.0%
TTTGTGACTCTTGAGAATCG+TGG + chr1_4:44569842-44569861 Msa0164790:intron 40.0%
!! AACTCACAAGCCAGTTTTGT+GGG - chr1_4:44569891-44569910 None:intergenic 40.0%
!! AGGGCATCTGCTTTATTTGT+TGG + chr1_4:44570457-44570476 Msa0164790:intron 40.0%
CTTAGCAATTTCTGCTTTGC+AGG - chr1_4:44570493-44570512 None:intergenic 40.0%
CTGCAAAGCAGAAATTGCTA+AGG + chr1_4:44570491-44570510 Msa0164790:CDS 40.0%
!!! GCAAAAGCACTCAGATTTTC+AGG - chr1_4:44570523-44570542 None:intergenic 40.0%
! TCTGAGTGCTTTTGCTCATT+TGG + chr1_4:44570528-44570547 Msa0164790:CDS 40.0%
GTCGTAAGTCTGGCTAATTA+TGG + chr1_4:44570658-44570677 Msa0164790:intron 40.0%
GTTATGTGGAGCCATCTATT+TGG + chr1_4:44570680-44570699 Msa0164790:intron 40.0%
!! GCCATCTATTTGGCTTGTAT+TGG + chr1_4:44570690-44570709 Msa0164790:intron 40.0%
GAGAATTAAGCAACCTCTGT+TGG - chr1_4:44570877-44570896 None:intergenic 40.0%
! CATTTTCTTTAATGCTCCGC+AGG + chr1_4:44570950-44570969 Msa0164790:intron 40.0%
TCAAGCAACGAATGCAAACT+GGG + chr1_4:44570976-44570995 Msa0164790:CDS 40.0%
! CTGTTCGCTTTATTGCATCT+AGG + chr1_4:44571021-44571040 Msa0164790:CDS 40.0%
AACAAAATATCACAGGTGCG+GGG - chr1_4:44571121-44571140 None:intergenic 40.0%
TATTTCCAATCACAGGGGTA+TGG + chr1_4:44571162-44571181 Msa0164790:intron 40.0%
! GCAAAACTGAATAGCATCGA+AGG - chr1_4:44571211-44571230 None:intergenic 40.0%
CTAAACGAATCTGCTCATAG+AGG - chr1_4:44571233-44571252 None:intergenic 40.0%
CTCTATGAGCAGATTCGTTT+AGG + chr1_4:44571231-44571250 Msa0164790:CDS 40.0%
TCCACTACTTCATTTGTGCA+TGG + chr1_4:44571573-44571592 Msa0164790:intron 40.0%
ACCATGCACAAATGAAGTAG+TGG - chr1_4:44571577-44571596 None:intergenic 40.0%
!! GCAATTATTGGTGCTTTTGC+AGG + chr1_4:44571654-44571673 Msa0164790:CDS 40.0%
TTTAACTGTGCTTCAAGCTG+AGG + chr1_4:44571751-44571770 Msa0164790:intron 40.0%
AAGTGGTGTAGTTATAGCTC+CGG - chr1_4:44572322-44572341 None:intergenic 40.0%
! CTTGTCTTGATGACATCAAG+TGG - chr1_4:44572339-44572358 None:intergenic 40.0%
CACTTGATGTCATCAAGACA+AGG + chr1_4:44572337-44572356 Msa0164790:CDS 40.0%
!! ATTCCCTTGTATTGGTTTGC+AGG - chr1_4:44572507-44572526 None:intergenic 40.0%
!! ATACCTTCAGAAAAGCACCT+GGG - chr1_4:44572566-44572585 None:intergenic 40.0%
TTCAGAAAGATACAGCCACA+TGG + chr1_4:44572671-44572690 Msa0164790:intron 40.0%
! GGAAACGTTTTGTACTCTCA+AGG - chr1_4:44572809-44572828 None:intergenic 40.0%
AGGGGTAATACATTGTACAC+GGG - chr1_4:44572940-44572959 None:intergenic 40.0%
GAGGGGTAATACATTGTACA+CGG - chr1_4:44572941-44572960 None:intergenic 40.0%
TGTACAATGTATTACCCCTC+TGG + chr1_4:44572941-44572960 Msa0164790:three_prime_UTR 40.0%
ATGTATTCTGCCTGCGGAAA+CGG - chr1_4:44567329-44567348 None:intergenic 45.0%
GAGCCATCACTGAACAAAAG+AGG - chr1_4:44567358-44567377 None:intergenic 45.0%
TCCTCTTACACTCTCCGTTA+CGG + chr1_4:44567376-44567395 Msa0164790:CDS 45.0%
AGTGATGTGAAACATACCGG+AGG - chr1_4:44567414-44567433 None:intergenic 45.0%
TCGTGAATATAGGCCGTGTT+TGG - chr1_4:44567708-44567727 None:intergenic 45.0%
AAAACCCGCTGGTAAGATGA+GGG - chr1_4:44567840-44567859 None:intergenic 45.0%
!! TCTTACCAGCGGGTTTTGTA+AGG + chr1_4:44567843-44567862 Msa0164790:intron 45.0%
ACATATGAAGGGATCGCAAC+TGG - chr1_4:44568380-44568399 None:intergenic 45.0%
GGTCAGCCTTCTACTCAAAT+AGG - chr1_4:44568602-44568621 None:intergenic 45.0%
!! TTGTTTTGTTAGGCTGCTCG+CGG + chr1_4:44569289-44569308 Msa0164790:intron 45.0%
!! GCCTTTATTCTGGATTGGCA+GGG + chr1_4:44569335-44569354 Msa0164790:CDS 45.0%
TCCCTGCCAATCCAGAATAA+AGG - chr1_4:44569339-44569358 None:intergenic 45.0%
GAAACATCATGCTATCCACG+AGG - chr1_4:44569388-44569407 None:intergenic 45.0%
ATACTCCTGTCCCGATATGA+TGG + chr1_4:44569704-44569723 Msa0164790:intron 45.0%
AAACTCCATCATATCGGGAC+AGG - chr1_4:44569712-44569731 None:intergenic 45.0%
GTGGGGTTGTGTTAGGATTT+GGG - chr1_4:44569873-44569892 None:intergenic 45.0%
TGTGGGGTTGTGTTAGGATT+TGG - chr1_4:44569874-44569893 None:intergenic 45.0%
!! CAGTTTTGTGGGGTTGTGTT+AGG - chr1_4:44569880-44569899 None:intergenic 45.0%
CTAACACAACCCCACAAAAC+TGG + chr1_4:44569878-44569897 Msa0164790:intron 45.0%
!! ACTCACAAGCCAGTTTTGTG+GGG - chr1_4:44569890-44569909 None:intergenic 45.0%
! CAACTCACAAGCCAGTTTTG+TGG - chr1_4:44569892-44569911 None:intergenic 45.0%
!! CAAAACTGGCTTGTGAGTTG+AGG + chr1_4:44569892-44569911 Msa0164790:intron 45.0%
ACACTCCACGAAACATAGAC+AGG - chr1_4:44570011-44570030 None:intergenic 45.0%
! TTTTGTTCGCGTTCCAACAG+AGG + chr1_4:44570861-44570880 Msa0164790:CDS 45.0%
ATTCGTTGCTTGACAACCTG+CGG - chr1_4:44570969-44570988 None:intergenic 45.0%
GTCAAGCAACGAATGCAAAC+TGG + chr1_4:44570975-44570994 Msa0164790:CDS 45.0%
! TCGCTTTATTGCATCTAGGG+AGG + chr1_4:44571025-44571044 Msa0164790:CDS 45.0%
! CGCTTTATTGCATCTAGGGA+GGG + chr1_4:44571026-44571045 Msa0164790:CDS 45.0%
AAGATCCATACCCCTGTGAT+TGG - chr1_4:44571170-44571189 None:intergenic 45.0%
TTTGCCAGAAAGGTCTGAGA+GGG - chr1_4:44571380-44571399 None:intergenic 45.0%
GCACCACCATATTTCAGACA+CGG + chr1_4:44572064-44572083 Msa0164790:intron 45.0%
CACCACCATATTTCAGACAC+GGG + chr1_4:44572065-44572084 Msa0164790:intron 45.0%
! AAGCTCCCGTGTCTGAAATA+TGG - chr1_4:44572073-44572092 None:intergenic 45.0%
TTTCTTGTAGGCGCACTAAC+CGG + chr1_4:44572300-44572319 Msa0164790:intron 45.0%
CAAGACAAGGTTAATGGTCC+AGG + chr1_4:44572350-44572369 Msa0164790:CDS 45.0%
CACGAGAGGATATGTGTATC+AGG - chr1_4:44572397-44572416 None:intergenic 45.0%
GCAGAGTAATTAGACACGAG+AGG - chr1_4:44572411-44572430 None:intergenic 45.0%
! TCCTATTTTCCTCCTCCTCA+AGG + chr1_4:44572479-44572498 Msa0164790:intron 45.0%
! CCTATTTTCCTCCTCCTCAA+GGG + chr1_4:44572480-44572499 Msa0164790:intron 45.0%
GGACCTGCAAACCAATACAA+GGG + chr1_4:44572501-44572520 Msa0164790:CDS 45.0%
TGGGCCCTCTTCCTTAATAA+TGG - chr1_4:44572547-44572566 None:intergenic 45.0%
ATTATTAAGGAAGAGGGCCC+AGG + chr1_4:44572546-44572565 Msa0164790:CDS 45.0%
!! CATACCTTCAGAAAAGCACC+TGG - chr1_4:44572567-44572586 None:intergenic 45.0%
! ATGCCTATCCAAAGCACTCT+TGG - chr1_4:44572762-44572781 None:intergenic 45.0%
! AGAGTGCTTTGGATAGGCAT+AGG + chr1_4:44572762-44572781 Msa0164790:CDS 45.0%
! CACTGAGCTAGTTTAGGTGT+AGG - chr1_4:44572846-44572865 None:intergenic 45.0%
!!! AAAAATAATTTAGTTTTATT+TGG + chr1_4:44571990-44572009 Msa0164790:intron 5.0%
AGATAACAACCCGTTTCCGC+AGG + chr1_4:44567316-44567335 Msa0164790:five_prime_UTR 50.0%
TGTATTCTGCCTGCGGAAAC+GGG - chr1_4:44567328-44567347 None:intergenic 50.0%
! ACCGTAACGGAGAGTGTAAG+AGG - chr1_4:44567380-44567399 None:intergenic 50.0%
GGCAGAATCTTGCACCGTAA+CGG - chr1_4:44567393-44567412 None:intergenic 50.0%
! TCAATAGTGTTGGGCGTGAG+AGG + chr1_4:44567739-44567758 Msa0164790:intron 50.0%
GATACCCCTCATCTTACCAG+CGG + chr1_4:44567832-44567851 Msa0164790:intron 50.0%
ATACCCCTCATCTTACCAGC+GGG + chr1_4:44567833-44567852 Msa0164790:intron 50.0%
AAACCCGCTGGTAAGATGAG+GGG - chr1_4:44567839-44567858 None:intergenic 50.0%
CAAAACCCGCTGGTAAGATG+AGG - chr1_4:44567841-44567860 None:intergenic 50.0%
GTCATCCTTACAAAACCCGC+TGG - chr1_4:44567851-44567870 None:intergenic 50.0%
GCAACTGGTGTGTGTGAGAA+CGG - chr1_4:44568365-44568384 None:intergenic 50.0%
GGGGGATAGCATCTTAGTGT+TGG - chr1_4:44568623-44568642 None:intergenic 50.0%
!! TATGCAGAGGGTGTTATCGC+AGG + chr1_4:44568780-44568799 Msa0164790:intron 50.0%
GGCAGTGATGCAAAGTCTAG+AGG - chr1_4:44568987-44569006 None:intergenic 50.0%
ACTTTGCATCACTGCCAGCT+AGG + chr1_4:44568991-44569010 Msa0164790:intron 50.0%
CCACAACAATCAAGCCTAGC+TGG - chr1_4:44569008-44569027 None:intergenic 50.0%
CCAGCTAGGCTTGATTGTTG+TGG + chr1_4:44569005-44569024 Msa0164790:intron 50.0%
!! GGCCTTTATTCTGGATTGGC+AGG + chr1_4:44569334-44569353 Msa0164790:CDS 50.0%
TGCTATCCACGAGGATCTCA+CGG - chr1_4:44569379-44569398 None:intergenic 50.0%
ACAACTGGAGTTGGGTTACC+TGG + chr1_4:44569605-44569624 Msa0164790:intron 50.0%
AGGCCATCTCTTATCCGATG+TGG + chr1_4:44569942-44569961 Msa0164790:intron 50.0%
GGCCATCTCTTATCCGATGT+GGG + chr1_4:44569943-44569962 Msa0164790:intron 50.0%
GTCCCACATCGGATAAGAGA+TGG - chr1_4:44569948-44569967 None:intergenic 50.0%
AGATGCAGCAATGCCTCCTA+TGG - chr1_4:44570842-44570861 None:intergenic 50.0%
GCGAACAGCATTAGAAGCTG+AGG - chr1_4:44571009-44571028 None:intergenic 50.0%
! GCATCTAGGGAGGGCTTTAA+AGG + chr1_4:44571035-44571054 Msa0164790:CDS 50.0%
ATATCACAGGTGCGGGGAAT+AGG - chr1_4:44571115-44571134 None:intergenic 50.0%
TTGCCAGAAAGGTCTGAGAG+GGG - chr1_4:44571379-44571398 None:intergenic 50.0%
GTTTGCCAGAAAGGTCTGAG+AGG - chr1_4:44571381-44571400 None:intergenic 50.0%
! CTCCCGTGTCTGAAATATGG+TGG - chr1_4:44572070-44572089 None:intergenic 50.0%
TACCACATCACAAGGCTGCT+AGG - chr1_4:44572270-44572289 None:intergenic 50.0%
CCCTTGAGGAGGAGGAAAAT+AGG - chr1_4:44572483-44572502 None:intergenic 50.0%
!! ATTGGTTTGCAGGTCCCTTG+AGG - chr1_4:44572497-44572516 None:intergenic 50.0%
GGGACCTGCAAACCAATACA+AGG + chr1_4:44572500-44572519 Msa0164790:intron 50.0%
!! GTATTGGGCCAAGAGTGCTT+TGG + chr1_4:44572751-44572770 Msa0164790:CDS 50.0%
! GTGCTTTGGATAGGCATAGG+TGG + chr1_4:44572765-44572784 Msa0164790:CDS 50.0%
CAAAACGTTTCCTTGCCGAG+AGG + chr1_4:44572817-44572836 Msa0164790:CDS 50.0%
TTTAGGTGTAGGACGCCTCT+CGG - chr1_4:44572835-44572854 None:intergenic 50.0%
! CTGCAGCACTGAGCTAGTTT+AGG - chr1_4:44572852-44572871 None:intergenic 50.0%
ACGGTGCAAGATTCTGCCTC+CGG + chr1_4:44567395-44567414 Msa0164790:CDS 55.0%
! GTTGGGCGTGAGAGGTGTAT+TGG + chr1_4:44567747-44567766 Msa0164790:intron 55.0%
GTGTGTGTGAGAACGGAGTG+AGG - chr1_4:44568358-44568377 None:intergenic 55.0%
! GTTATCGCAGGAGGTACAGC+TGG + chr1_4:44568792-44568811 Msa0164790:CDS 55.0%
! TTTTGTTAGGCTGCTCGCGG+AGG + chr1_4:44569292-44569311 Msa0164790:intron 55.0%
CTCACGGTAAGACACCAGCA+AGG - chr1_4:44569363-44569382 None:intergenic 55.0%
GTCTTACCGTGAGATCCTCG+TGG + chr1_4:44569370-44569389 Msa0164790:intron 55.0%
CCTATGGCACCTGCAGTCTA+AGG - chr1_4:44570826-44570845 None:intergenic 55.0%
! CCTTAGACTGCAGGTGCCAT+AGG + chr1_4:44570823-44570842 Msa0164790:intron 55.0%
! TAGACTGCAGGTGCCATAGG+AGG + chr1_4:44570826-44570845 Msa0164790:intron 55.0%
TGCCAGAAAGGTCTGAGAGG+GGG - chr1_4:44571378-44571397 None:intergenic 55.0%
! GTCCTAGCAGCCTTGTGATG+TGG + chr1_4:44572265-44572284 Msa0164790:intron 55.0%
!! GGGCCAAGAGTGCTTTGGAT+AGG + chr1_4:44572756-44572775 Msa0164790:CDS 55.0%
!! GCAGAGGGTGTTATCGCAGG+AGG + chr1_4:44568783-44568802 Msa0164790:intron 60.0%
! GGATTGGCAGGGAACCTTGC+TGG + chr1_4:44569346-44569365 Msa0164790:CDS 60.0%
TCCCCCCTCTCAGACCTTTC+TGG + chr1_4:44571373-44571392 Msa0164790:intron 60.0%
GCCAGAAAGGTCTGAGAGGG+GGG - chr1_4:44571377-44571396 None:intergenic 60.0%
TTGCAGGTCCCTTGAGGAGG+AGG - chr1_4:44572491-44572510 None:intergenic 60.0%
GGTTTGCAGGTCCCTTGAGG+AGG - chr1_4:44572494-44572513 None:intergenic 60.0%
! GGGCCCAGGTGCTTTTCTGA+AGG + chr1_4:44572560-44572579 Msa0164790:CDS 60.0%
GTGTAGGACGCCTCTCGGCA+AGG - chr1_4:44572830-44572849 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 44567294 44573079 44567294 ID=Msa0164790;Name=Msa0164790
chr1_4 mRNA 44567294 44573079 44567294 ID=Msa0164790-mRNA-1;Parent=Msa0164790;Name=Msa0164790-mRNA-1;_AED=0.14;_eAED=0.14;_QI=77|1|1|1|1|1|12|183|326
chr1_4 exon 44567294 44567416 44567294 ID=Msa0164790-mRNA-1:exon:12757;Parent=Msa0164790-mRNA-1
chr1_4 exon 44568115 44568216 44568115 ID=Msa0164790-mRNA-1:exon:12758;Parent=Msa0164790-mRNA-1
chr1_4 exon 44568787 44568869 44568787 ID=Msa0164790-mRNA-1:exon:12759;Parent=Msa0164790-mRNA-1
chr1_4 exon 44569301 44569377 44569301 ID=Msa0164790-mRNA-1:exon:12760;Parent=Msa0164790-mRNA-1
chr1_4 exon 44570459 44570549 44570459 ID=Msa0164790-mRNA-1:exon:12761;Parent=Msa0164790-mRNA-1
chr1_4 exon 44570829 44570882 44570829 ID=Msa0164790-mRNA-1:exon:12762;Parent=Msa0164790-mRNA-1
chr1_4 exon 44570972 44571067 44570972 ID=Msa0164790-mRNA-1:exon:12763;Parent=Msa0164790-mRNA-1
chr1_4 exon 44571177 44571266 44571177 ID=Msa0164790-mRNA-1:exon:12764;Parent=Msa0164790-mRNA-1
chr1_4 exon 44571624 44571675 44571624 ID=Msa0164790-mRNA-1:exon:12765;Parent=Msa0164790-mRNA-1
chr1_4 exon 44572310 44572371 44572310 ID=Msa0164790-mRNA-1:exon:12766;Parent=Msa0164790-mRNA-1
chr1_4 exon 44572501 44572581 44572501 ID=Msa0164790-mRNA-1:exon:12767;Parent=Msa0164790-mRNA-1
chr1_4 exon 44572750 44573079 44572750 ID=Msa0164790-mRNA-1:exon:12768;Parent=Msa0164790-mRNA-1
chr1_4 five_prime_UTR 44567294 44567370 44567294 ID=Msa0164790-mRNA-1:five_prime_utr;Parent=Msa0164790-mRNA-1
chr1_4 CDS 44567371 44567416 44567371 ID=Msa0164790-mRNA-1:cds;Parent=Msa0164790-mRNA-1
chr1_4 CDS 44568115 44568216 44568115 ID=Msa0164790-mRNA-1:cds;Parent=Msa0164790-mRNA-1
chr1_4 CDS 44568787 44568869 44568787 ID=Msa0164790-mRNA-1:cds;Parent=Msa0164790-mRNA-1
chr1_4 CDS 44569301 44569377 44569301 ID=Msa0164790-mRNA-1:cds;Parent=Msa0164790-mRNA-1
chr1_4 CDS 44570459 44570549 44570459 ID=Msa0164790-mRNA-1:cds;Parent=Msa0164790-mRNA-1
chr1_4 CDS 44570829 44570882 44570829 ID=Msa0164790-mRNA-1:cds;Parent=Msa0164790-mRNA-1
chr1_4 CDS 44570972 44571067 44570972 ID=Msa0164790-mRNA-1:cds;Parent=Msa0164790-mRNA-1
chr1_4 CDS 44571177 44571266 44571177 ID=Msa0164790-mRNA-1:cds;Parent=Msa0164790-mRNA-1
chr1_4 CDS 44571624 44571675 44571624 ID=Msa0164790-mRNA-1:cds;Parent=Msa0164790-mRNA-1
chr1_4 CDS 44572310 44572371 44572310 ID=Msa0164790-mRNA-1:cds;Parent=Msa0164790-mRNA-1
chr1_4 CDS 44572501 44572581 44572501 ID=Msa0164790-mRNA-1:cds;Parent=Msa0164790-mRNA-1
chr1_4 CDS 44572750 44572896 44572750 ID=Msa0164790-mRNA-1:cds;Parent=Msa0164790-mRNA-1
chr1_4 three_prime_UTR 44572897 44573079 44572897 ID=Msa0164790-mRNA-1:three_prime_utr;Parent=Msa0164790-mRNA-1
Gene Sequence

>Msa0164790

ATGGCTCCTCTTACACTCTCCGTTACGGTGCAAGATTCTGCCTCCGATGCTTGTACTAAGAGAAAGCAGAACTTAATTCTGAAAAATTCTTTTGCATCTGTTAGTGTGGGGCAAGAAAAGCCATTTGACTTCTTACGCACTTTATTCGAGGGTGTTATCGCAGGAGGTACAGCTGGAGTTGTTGTCGAAACAGCTTTATACCCCATTGACACTATAAAAACACGTCTGCAGGCTGCTCGCGGAGGAGAAAAACTATTATTGAAAGGCCTTTATTCTGGATTGGCAGGGAACCTTGCTGGTGTCTTACCGGCATCTGCTTTATTTGTTGGAGTTTATGAACCTGCAAAGCAGAAATTGCTAAGGATGTTTCCTGAAAATCTGAGTGCTTTTGCTCATTTGACTGCAGGTGCCATAGGAGGCATTGCTGCATCTTTTGTTCGCGTTCCAACAGAGGTTGTCAAGCAACGAATGCAAACTGGGCAGTTTACCTCAGCTTCTAATGCTGTTCGCTTTATTGCATCTAGGGAGGGCTTTAAAGGATTTTATGCTGGGTATGGATCTTTTTTACTGCGGGATTTGCCCTTCGATGCTATTCAGTTTTGCCTCTATGAGCAGATTCGTTTAGGTTATATGCTTGCGGCACGAAGAAATCTGAACGATCCAGAAAATGCAATTATTGGTGCTTTTGCAGGCGCACTAACCGGAGCTATAACTACACCACTTGATGTCATCAAGACAAGGTTAATGGTCCAGGGACCTGCAAACCAATACAAGGGAATTGTAGATTGTGTTCAAACCATTATTAAGGAAGAGGGCCCAGGTGCTTTTCTGAAGGGTATTGGGCCAAGAGTGCTTTGGATAGGCATAGGTGGTTCAATATTCTTTGGCGTCCTTGAGAGTACAAAACGTTTCCTTGCCGAGAGGCGTCCTACACCTAAACTAGCTCAGTGCTGCAGAAACTCAGAAAAAAGTAAAGATTAA
Protein sequence

>Msa0164790

MAPLTLSVTVQDSASDACTKRKQNLILKNSFASVSVGQEKPFDFLRTLFEGVIAGGTAGVVVETALYPIDTIKTRLQAARGGEKLLLKGLYSGLAGNLAGVLPASALFVGVYEPAKQKLLRMFPENLSAFAHLTAGAIGGIAASFVRVPTEVVKQRMQTGQFTSASNAVRFIASREGFKGFYAGYGSFLLRDLPFDAIQFCLYEQIRLGYMLAARRNLNDPENAIIGAFAGALTGAITTPLDVIKTRLMVQGPANQYKGIVDCVQTIIKEEGPGAFLKGIGPRVLWIGIGGSIFFGVLESTKRFLAERRPTPKLAQCCRNSEKSKD*