AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0400890


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0400890 MtrunA17_Chr3g0089171 98.656 372 5 0 1 372 1 372 0.0 759
Msa0400890 MtrunA17_Chr4g0019301 80.822 365 70 0 5 369 63 427 0.0 620
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0400890 AT5G47970.1 74.247 365 93 1 2 365 3 367 0.0 576
Msa0400890 AT5G47970.2 74.247 365 93 1 2 365 3 367 0.0 576
Msa0400890 AT3G63510.1 74.044 366 93 2 6 369 49 414 0.0 575
Msa0400890 AT3G63510.2 73.011 352 93 2 20 369 30 381 0.0 545
Msa0400890 AT5G47970.3 79.182 269 56 0 2 270 3 271 4.34e-164 460
Msa0400890 AT5G67220.1 25.000 244 161 7 9 248 88 313 1.62e-12 68.9

Find 145 sgRNAs with CRISPR-Local

Find 745 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAACAGCCCTTGGCATATTT+TGG 0.075789 3_2:-25660118 Msa0400890:intron
AGGCAGTAATTTAGAGAATT+TGG 0.183178 3_2:-25665057 Msa0400890:CDS
GCTGCTGTTTGCTCTGTTGC+TGG 0.185357 3_2:-25655775 Msa0400890:three_prime_UTR
GCCTCTGGGGTGCCTCTTCT+TGG 0.187436 3_2:+25655730 None:intergenic
CTTATTCTTACTGTTGGTTT+TGG 0.221107 3_2:-25655384 Msa0400890:three_prime_UTR
TTGAGGAATTTGTGCTAGTT+AGG 0.240176 3_2:-25665761 Msa0400890:five_prime_UTR
TCAACGTGGCAATAACTTAT+TGG 0.275459 3_2:-25656140 Msa0400890:three_prime_UTR
ATTATCTTCCTCCTTGGTTT+AGG 0.275986 3_2:-25665676 Msa0400890:intron
GACTTAGTGTTGCTACAATA+TGG 0.294861 3_2:-25659891 Msa0400890:CDS
CTGCTGTTTGCTCTGTTGCT+GGG 0.300217 3_2:-25655774 Msa0400890:three_prime_UTR
GATAATATACCGTGCAAGTT+TGG 0.307358 3_2:+25657928 None:intergenic
TGTTGCTACAATATGGATTT+CGG 0.322880 3_2:-25659884 Msa0400890:CDS
CTTATGCCAGGACAGATTCT+TGG 0.323434 3_2:-25665120 Msa0400890:intron
AGTGGAAGAATGAATATATA+TGG 0.337603 3_2:+25656044 None:intergenic
AACGTTGATAGTGCAATTTA+TGG 0.338705 3_2:-25660093 Msa0400890:CDS
TTAAACTTTCTATATAGAAT+TGG 0.339026 3_2:+25656616 None:intergenic
ACATATCACTACTTTATAGT+AGG 0.343218 3_2:-25655434 Msa0400890:three_prime_UTR
TGTTTATCAAAAGGGTAATC+TGG 0.345459 3_2:-25665437 Msa0400890:intron
ACCAAGCTTGCTGATGCTTA+TGG 0.353537 3_2:-25665026 Msa0400890:CDS
ATTGCTACCCTCCTTGTCAT+TGG 0.354454 3_2:+25655831 None:intergenic
ACTTTGCTGCAGCCTTTACT+TGG 0.359095 3_2:-25658008 Msa0400890:intron
GTTGGGTTAGTGACACAAAC+AGG 0.359822 3_2:+25655691 None:intergenic
TGAAACAATTGTTTATCAAA+AGG 0.368406 3_2:-25665446 Msa0400890:CDS
AAAACATGCTTGGCTCTATA+CGG 0.372691 3_2:-25665482 Msa0400890:CDS
GCATTGCAGTCTCCTCTTCA+AGG 0.374683 3_2:+25666431 None:intergenic
TTTGATTTGTAATGTACAAT+GGG 0.389294 3_2:-25655632 Msa0400890:three_prime_UTR
CTCTGTTGCTGGGGTTGCAA+TGG 0.391387 3_2:-25655764 Msa0400890:three_prime_UTR
CCTCCGATTTGAAGCACAAT+AGG 0.394225 3_2:+25665077 None:intergenic
TGAGGAATTTGTGCTAGTTA+GGG 0.399635 3_2:-25665760 Msa0400890:five_prime_UTR
CTGAGCCTGGGAATGGACTT+TGG 0.401286 3_2:-25657974 Msa0400890:CDS
GACTTAACATTTACAATCAA+TGG 0.407072 3_2:-25663727 Msa0400890:CDS
TTTGCTCTTATTCTTACTGT+TGG 0.410661 3_2:-25655390 Msa0400890:three_prime_UTR
AACCGATGATCGGTTGGTTA+CGG 0.418255 3_2:+25655921 None:intergenic
TCCTCGTCTCTTGTTCTGTA+TGG 0.418375 3_2:+25656689 None:intergenic
TTCCATTCTGAGCCTGGGAA+TGG 0.419020 3_2:-25657981 Msa0400890:CDS
CTTGAGAAATACCAAGTATA+CGG 0.424123 3_2:-25659915 Msa0400890:CDS
GACTCAGTCCTGCTGAAAAT+CGG 0.424228 3_2:-25663884 Msa0400890:CDS
GACGAATCCAAGACTGAGTC+TGG 0.424697 3_2:+25656776 None:intergenic
TTGATTGTAAATGTTAAGTC+AGG 0.446431 3_2:+25663730 None:intergenic
CGCTTCCAAAGTCCATTCCC+AGG 0.446798 3_2:+25657969 None:intergenic
GTAACGAGTAAGTTAGAAAC+GGG 0.453061 3_2:-25666459 None:intergenic
CATATCACTACTTTATAGTA+GGG 0.455483 3_2:-25655433 Msa0400890:three_prime_UTR
ATTTATGGTGTACCAAGTAT+TGG 0.455566 3_2:-25660078 Msa0400890:CDS
ACTGACAGGTACATTTGTAT+TGG 0.466354 3_2:+25664685 None:intergenic
CATCCTATTGTGCTTCAAAT+CGG 0.466584 3_2:-25665080 Msa0400890:CDS
TATTGGTCTTACACGTCGTC+AGG 0.466771 3_2:-25660061 Msa0400890:intron
GTCAGGTGATTTCATTTACA+AGG 0.469226 3_2:-25663967 Msa0400890:intron
GCCATAAGCATCAGCAAGCT+TGG 0.470192 3_2:+25665025 None:intergenic
TTTCATAATTCACTCAAGAA+AGG 0.470852 3_2:-25663919 Msa0400890:CDS
TGCATATAACAGATAACAAA+AGG 0.473099 3_2:+25656654 None:intergenic
GATGATCGGTTGGTTACGGC+TGG 0.474152 3_2:+25655925 None:intergenic
GCTAGGATTTGTCGCTATTG+AGG 0.474783 3_2:-25655667 Msa0400890:three_prime_UTR
AAGATGATTATCTTCCTCCT+TGG 0.476846 3_2:-25665682 Msa0400890:CDS
GAAACAATTGTTTATCAAAA+GGG 0.476875 3_2:-25665445 Msa0400890:CDS
GAGGTCAGGCTTATCTGATA+TGG 0.479703 3_2:+25656478 None:intergenic
GGTAGTTATATACATCTTTG+AGG 0.483116 3_2:-25665778 Msa0400890:five_prime_UTR
GTAGCTGGACGTGGATGCTT+TGG 0.484500 3_2:-25664866 Msa0400890:CDS
ACACTAAGTCTCCGTATACT+TGG 0.484984 3_2:+25659904 None:intergenic
TTTCAGTGTGGCTCCAATGA+TGG 0.488112 3_2:-25665548 Msa0400890:intron
TGCCCTAGTCCTAGAGTAGC+TGG 0.494583 3_2:-25664881 Msa0400890:CDS
AGCAATTCCAGACTCAGTCT+TGG 0.502558 3_2:-25656783 Msa0400890:CDS
GTCTCATATCAAAACATGCT+TGG 0.503896 3_2:-25665492 Msa0400890:CDS
AATTCAAGTACATTTAGATA+AGG 0.505057 3_2:+25655529 None:intergenic
GTCAGTGTCAAATGTCGAAT+CGG 0.505517 3_2:-25664668 Msa0400890:CDS
TTATCTGTCCAATCCATCAT+TGG 0.505521 3_2:+25665535 None:intergenic
GAATGAGATAAGATAATGTA+TGG 0.505892 3_2:-25656108 Msa0400890:three_prime_UTR
TGCTGTTTGCTCTGTTGCTG+GGG 0.508878 3_2:-25655773 Msa0400890:three_prime_UTR
CGTATACTTGGTATTTCTCA+AGG 0.521086 3_2:+25659916 None:intergenic
GTCCATTCCCAGGCTCAGAA+TGG 0.521732 3_2:+25657979 None:intergenic
TAGCGACAAATCCTAGCAGT+TGG 0.523285 3_2:+25655673 None:intergenic
ACGTCTTATGCTTGAGCCAA+AGG 0.524944 3_2:-25664840 Msa0400890:intron
GCTGCGTTGCAACCGATGAT+CGG 0.526416 3_2:+25655911 None:intergenic
CGTCCAGCTACTCTAGGACT+AGG 0.527580 3_2:+25664878 None:intergenic
CTCAAGAAAGGCATTGCTGA+AGG 0.531715 3_2:-25663907 Msa0400890:CDS
GGTGCTCATGGTGTTATGCT+TGG 0.533656 3_2:-25661915 Msa0400890:CDS
AGCACAATAGGATGTTGGTC+TGG 0.537619 3_2:+25665089 None:intergenic
ATTCGACATTTGACACTGAC+AGG 0.541211 3_2:+25664671 None:intergenic
AGCGACAAATCCTAGCAGTT+GGG 0.546386 3_2:+25655674 None:intergenic
TGAATTATGAAATGCCTAGC+AGG 0.546624 3_2:+25663930 None:intergenic
GCGAAATCACCACCTGGCCG+TGG 0.548774 3_2:-25656749 Msa0400890:CDS
CGTTGCAACCGATGATCGGT+TGG 0.553263 3_2:+25655915 None:intergenic
AGTGCTGTAAGAGCAGTTGA+AGG 0.554404 3_2:-25655874 Msa0400890:three_prime_UTR
TCGTCTCTTGTTCTGTATGG+TGG 0.555848 3_2:+25656692 None:intergenic
GCTCTATACGGAGATGCTTG+CGG 0.558253 3_2:-25665470 Msa0400890:CDS
AATCACTATGACATCCTCAA+TGG 0.558898 3_2:-25655956 Msa0400890:three_prime_UTR
AGTTTAAGTAAAAGCACTAG+TGG 0.562140 3_2:-25656600 Msa0400890:three_prime_UTR
AACATACAGTGTAGTTGCAA+TGG 0.562425 3_2:-25665708 Msa0400890:exon
ACTATGACATCCTCAATGGT+TGG 0.565016 3_2:-25655952 Msa0400890:three_prime_UTR
CGACGTGTAAGACCAATACT+TGG 0.566812 3_2:+25660066 None:intergenic
GTGTCACTAACCCAACTGCT+AGG 0.567214 3_2:-25655684 Msa0400890:three_prime_UTR
AGTCCTAGAGTAGCTGGACG+TGG 0.567588 3_2:-25664875 Msa0400890:CDS
GCTCTAAAGATCGGTGCTCA+TGG 0.568010 3_2:-25661927 Msa0400890:CDS
ATCAATGCAGCTCTAAAGAT+CGG 0.570665 3_2:-25661936 Msa0400890:CDS
TGTAACGAGTAAGTTAGAAA+CGG 0.570907 3_2:-25666460 None:intergenic
CATCCACGTCCAGCTACTCT+AGG 0.571905 3_2:+25664872 None:intergenic
AATGACAAGGAGGGTAGCAA+TGG 0.572603 3_2:-25655829 Msa0400890:three_prime_UTR
TTTGAAGCACAATAGGATGT+TGG 0.573878 3_2:+25665084 None:intergenic
TCTCTTGTTCTGTATGGTGG+AGG 0.574824 3_2:+25656695 None:intergenic
TAGCTTATATTGTGAGCAAG+TGG 0.576612 3_2:+25656026 None:intergenic
TCTCTTCTCTATCACCTGCT+AGG 0.577149 3_2:-25663944 Msa0400890:CDS
ACAAGGAAAGTTTGTTGCGG+AGG 0.577574 3_2:-25664726 Msa0400890:intron
GTGTGGCTCCAATGATGGAT+TGG 0.579309 3_2:-25665543 Msa0400890:CDS
TCAAGAAAGGCATTGCTGAA+GGG 0.580403 3_2:-25663906 Msa0400890:CDS
GTGCTGTAAGAGCAGTTGAA+GGG 0.585017 3_2:-25655873 Msa0400890:three_prime_UTR
AGCCGTAACCAACCGATCAT+CGG 0.587544 3_2:-25655923 Msa0400890:three_prime_UTR
ACGTTCCCCAAAATATGCCA+AGG 0.589900 3_2:+25660111 None:intergenic
GTCCAGCTACTCTAGGACTA+GGG 0.590412 3_2:+25664879 None:intergenic
ACAAGGAGGGTAGCAATGGA+AGG 0.594273 3_2:-25655825 Msa0400890:three_prime_UTR
TGCTGTAAGAGCAGTTGAAG+GGG 0.596756 3_2:-25655872 Msa0400890:three_prime_UTR
TTCACAATGTCTCTCACAGT+TGG 0.596783 3_2:+25659861 None:intergenic
ATTGGGACATACTTCAGTGG+AGG 0.599434 3_2:+25663855 None:intergenic
ATGTATGGTCCTACCACAGA+AGG 0.600602 3_2:-25656093 Msa0400890:three_prime_UTR
AGTCAGGAAAGTCGCGCAAG+AGG 0.602476 3_2:+25663746 None:intergenic
TTCTGCTGTCCAAACTTGCA+CGG 0.605924 3_2:-25657937 Msa0400890:intron
ATTTGTTACTTACTTATGGT+AGG 0.613498 3_2:+25661884 None:intergenic
ACAATAGGATGTTGGTCTGG+AGG 0.620417 3_2:+25665092 None:intergenic
TTTATTGGGACATACTTCAG+TGG 0.624926 3_2:+25663852 None:intergenic
ATGATCGGTTGGTTACGGCT+GGG 0.625964 3_2:+25655926 None:intergenic
TTAACATTTACAATCAATGG+TGG 0.629206 3_2:-25663724 Msa0400890:CDS
TATACAAGGAAAGTTTGTTG+CGG 0.637006 3_2:-25664729 Msa0400890:intron
TGGTATTACTTGTATTGATG+AGG 0.637445 3_2:-25663704 Msa0400890:intron
TCGTTTGCGAAATCACCACC+TGG 0.639022 3_2:-25656755 Msa0400890:CDS
GGCTGGGAAACCAACCATTG+AGG 0.639229 3_2:+25655942 None:intergenic
ATATCACTACTTTATAGTAG+GGG 0.639878 3_2:-25655432 Msa0400890:three_prime_UTR
AAACGGGGTATACCTTGAAG+AGG 0.640784 3_2:-25666443 Msa0400890:five_prime_UTR
AAAACCAACAGTAAAAGCAA+AGG 0.644645 3_2:+25656560 None:intergenic
CGTTCCCCAAAATATGCCAA+GGG 0.648232 3_2:+25660112 None:intergenic
CCTATTGTGCTTCAAATCGG+AGG 0.656979 3_2:-25665077 Msa0400890:CDS
GCAGATGATGAACCAAGAAG+AGG 0.660121 3_2:-25655742 Msa0400890:three_prime_UTR
AAGCATAGATACCTAAACCA+AGG 0.663616 3_2:+25665665 None:intergenic
GATCATCGGTTGCAACGCAG+CGG 0.682918 3_2:-25655909 Msa0400890:three_prime_UTR
AGTTGTACCAATGACAAGGA+GGG 0.684053 3_2:-25655838 Msa0400890:three_prime_UTR
CAGTTGTACCAATGACAAGG+AGG 0.687873 3_2:-25655839 Msa0400890:three_prime_UTR
AAAAGATCTCCACGGCCAGG+TGG 0.689304 3_2:+25656740 None:intergenic
TTGGGTTAGTGACACAAACA+GGG 0.691418 3_2:+25655692 None:intergenic
TGTCAAATGTCGAATCGGTG+TGG 0.696626 3_2:-25664663 Msa0400890:CDS
ACCAAGAAGAGGCACCCCAG+AGG 0.700077 3_2:-25655731 Msa0400890:three_prime_UTR
GATCAGTTGTACCAATGACA+AGG 0.701301 3_2:-25655842 Msa0400890:three_prime_UTR
CATAGATACCTAAACCAAGG+AGG 0.709626 3_2:+25665668 None:intergenic
AACTGTGAGAGACATTGTGA+AGG 0.711057 3_2:-25659859 Msa0400890:intron
ACCATACAGAACAAGAGACG+AGG 0.726301 3_2:-25656690 Msa0400890:CDS
TTGATTTGTAATGTACAATG+GGG 0.728176 3_2:-25655631 Msa0400890:three_prime_UTR
CCATTATCAACTATTCAACG+TGG 0.732744 3_2:-25656154 Msa0400890:intron
TAACGAGTAAGTTAGAAACG+GGG 0.769862 3_2:-25666458 None:intergenic
CAGTTGTTGACAGAATCCAG+CGG 0.775960 3_2:+25666375 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTATTTTTTTTTTAAAAAA+AGG + chr3_2:25664371-25664390 None:intergenic 0.0%
!!! TTTTTTTAAAAAAAAAATAA+TGG - chr3_2:25664370-25664389 Msa0400890:intron 0.0%
!!! TTTTTTAAAAAAAAAATAAT+GGG - chr3_2:25664371-25664390 Msa0400890:intron 0.0%
!! AATAAAAATTTAACAAAAAC+GGG + chr3_2:25655495-25655514 None:intergenic 10.0%
!! GTTTATAATGATAATAAATT+AGG - chr3_2:25656372-25656391 Msa0400890:intron 10.0%
!! CTATAAAAATCAAAATTTAT+TGG + chr3_2:25657949-25657968 None:intergenic 10.0%
!!! TGACTTATTTATTTATTTTT+TGG + chr3_2:25659355-25659374 None:intergenic 10.0%
!!! ATAAAATTGAACTTTTTATT+TGG - chr3_2:25659505-25659524 Msa0400890:intron 10.0%
!!! AAAAATCTAAAAAATGTTTT+AGG + chr3_2:25660389-25660408 None:intergenic 10.0%
!! TTATTTAATCTATAATTTGA+AGG - chr3_2:25660672-25660691 Msa0400890:intron 10.0%
!!! ATTAAACTAATGATATTTTA+AGG - chr3_2:25660730-25660749 Msa0400890:intron 10.0%
!!! TAATATCCATTTAAAATTTT+GGG + chr3_2:25662382-25662401 None:intergenic 10.0%
!! ATTTAAAGAAAAATATTCAT+TGG - chr3_2:25662537-25662556 Msa0400890:intron 10.0%
!!! TTTTTTTTTTAATCAAAGAT+CGG + chr3_2:25662651-25662670 None:intergenic 10.0%
!! TAGAAATAATAATGTAAATA+GGG + chr3_2:25663512-25663531 None:intergenic 10.0%
!! TTAGAAATAATAATGTAAAT+AGG + chr3_2:25663513-25663532 None:intergenic 10.0%
!! TAACTATTCAGAATAATAAT+TGG - chr3_2:25655686-25655705 Msa0400890:three_prime_UTR 15.0%
!! ATAATGATAATAAATTAGGA+AGG - chr3_2:25656376-25656395 Msa0400890:intron 15.0%
!! TAAGAAACAAAAATAATCAA+TGG + chr3_2:25656647-25656666 None:intergenic 15.0%
!!! AGTTAGAATTTTTTTGAATT+TGG - chr3_2:25657223-25657242 Msa0400890:intron 15.0%
!! ATTTATAAGAACACAAAATA+GGG + chr3_2:25657642-25657661 None:intergenic 15.0%
!! AAGAAATAACATATAAAGTA+AGG - chr3_2:25658229-25658248 Msa0400890:intron 15.0%
!!! ACTTATTTGTTGAATATAAA+GGG + chr3_2:25659323-25659342 None:intergenic 15.0%
!!! TATAATATTGAAGGTATTAT+TGG - chr3_2:25659598-25659617 Msa0400890:intron 15.0%
!!! ATAATATTGAAGGTATTATT+GGG - chr3_2:25659599-25659618 Msa0400890:intron 15.0%
!!! GTATTTGTTGTTATTATATA+AGG - chr3_2:25659767-25659786 Msa0400890:intron 15.0%
!!! ATATTATGAACAAATTTTCA+AGG - chr3_2:25660440-25660459 Msa0400890:intron 15.0%
!!! TATTATGAACAAATTTTCAA+GGG - chr3_2:25660441-25660460 Msa0400890:intron 15.0%
!! TTGAAAACAGATAATTTATA+GGG + chr3_2:25660544-25660563 None:intergenic 15.0%
!! ATTGAAAACAGATAATTTAT+AGG + chr3_2:25660545-25660564 None:intergenic 15.0%
!!! ACAAAACTAATGATATTTTA+GGG + chr3_2:25660645-25660664 None:intergenic 15.0%
!!! TGAATTTTTGTAAAATAGTT+AGG - chr3_2:25660807-25660826 Msa0400890:intron 15.0%
!!! GAATTTTTGTAAAATAGTTA+GGG - chr3_2:25660808-25660827 Msa0400890:intron 15.0%
!!! TAAAATTTTCCTTCAATTTT+TGG + chr3_2:25660865-25660884 None:intergenic 15.0%
!! TCAATCAAACTAAAATATAA+AGG + chr3_2:25660987-25661006 None:intergenic 15.0%
!!! CTAATATCCATTTAAAATTT+TGG + chr3_2:25662383-25662402 None:intergenic 15.0%
!! TGTTAATGTTATAATTCATT+GGG + chr3_2:25663303-25663322 None:intergenic 15.0%
!! TTAACACTTAATAATAGATT+AGG - chr3_2:25663317-25663336 Msa0400890:intron 15.0%
!! TAACACTTAATAATAGATTA+GGG - chr3_2:25663318-25663337 Msa0400890:intron 15.0%
!!! TCATACTTTTAACAAATAAT+AGG + chr3_2:25663632-25663651 None:intergenic 15.0%
!! GAAAAATAGAGAAAAAAATT+GGG + chr3_2:25663884-25663903 None:intergenic 15.0%
!! TTAAACTTTCTATATAGAAT+TGG + chr3_2:25665170-25665189 None:intergenic 15.0%
!!! TAATACAATCTTCATTTTTT+CGG - chr3_2:25665354-25665373 Msa0400890:intron 15.0%
!!! TGATTTTCTCAAATTATTAG+CGG + chr3_2:25655788-25655807 None:intergenic 20.0%
!!! ACAAATATAAGATTTTCAAG+AGG - chr3_2:25655877-25655896 Msa0400890:three_prime_UTR 20.0%
!!! CAAATATAAGATTTTCAAGA+GGG - chr3_2:25655878-25655897 Msa0400890:three_prime_UTR 20.0%
!! TGCACACAAAAAAAAAATTA+TGG + chr3_2:25655978-25655997 None:intergenic 20.0%
!!! ATAATTTTTTTTTTGTGTGC+AGG - chr3_2:25655977-25655996 Msa0400890:three_prime_UTR 20.0%
!! TGAAACAATTGTTTATCAAA+AGG - chr3_2:25656337-25656356 Msa0400890:intron 20.0%
!! GAAACAATTGTTTATCAAAA+GGG - chr3_2:25656338-25656357 Msa0400890:intron 20.0%
!!! TTTTCAATATATTACAGTTG+TGG - chr3_2:25656878-25656897 Msa0400890:intron 20.0%
!!! TTGTTAATTTTTGCTCAAAA+TGG - chr3_2:25657359-25657378 Msa0400890:intron 20.0%
!! GATTTATAAGAACACAAAAT+AGG + chr3_2:25657643-25657662 None:intergenic 20.0%
!!! TGTTCTTATAAATCTTCTTT+TGG - chr3_2:25657649-25657668 Msa0400890:intron 20.0%
!!! GTGTTATAAGTTTTAGAATT+TGG + chr3_2:25658467-25658486 None:intergenic 20.0%
!!! GTAATTCTCTTTTTTCATTT+TGG - chr3_2:25658703-25658722 Msa0400890:intron 20.0%
!!! AAGTTTTATTTATGTTGCTT+TGG - chr3_2:25658759-25658778 Msa0400890:intron 20.0%
!! ACCATATTCAGTAAATATAA+GGG + chr3_2:25659137-25659156 None:intergenic 20.0%
!! AACCATATTCAGTAAATATA+AGG + chr3_2:25659138-25659157 None:intergenic 20.0%
!! AAATAATTTACACAAGACAA+CGG + chr3_2:25659194-25659213 None:intergenic 20.0%
!!! GACTTATTTGTTGAATATAA+AGG + chr3_2:25659324-25659343 None:intergenic 20.0%
!!! GTTCAATTTTATCATATGTT+GGG + chr3_2:25659497-25659516 None:intergenic 20.0%
!!! AGTTCAATTTTATCATATGT+TGG + chr3_2:25659498-25659517 None:intergenic 20.0%
!! AAAAAATTTGTAGAATGTGA+TGG - chr3_2:25660007-25660026 Msa0400890:intron 20.0%
!! AAAAATTTGTAGAATGTGAT+GGG - chr3_2:25660008-25660027 Msa0400890:intron 20.0%
!! AGCTAAAGATTAAAAAACAA+AGG - chr3_2:25660048-25660067 Msa0400890:intron 20.0%
!!! ATTTTTCCTTTTTTTTTGAC+CGG - chr3_2:25660403-25660422 Msa0400890:intron 20.0%
!!! AATCAAAGCAAATTTTTAGA+GGG + chr3_2:25660515-25660534 None:intergenic 20.0%
!!! AAATCAAAGCAAATTTTTAG+AGG + chr3_2:25660516-25660535 None:intergenic 20.0%
!! TGTAATCAAATAAAGTTGTT+TGG + chr3_2:25660608-25660627 None:intergenic 20.0%
!!! CACAAAACTAATGATATTTT+AGG + chr3_2:25660646-25660665 None:intergenic 20.0%
!!! AAATTGAAGGAAAATTTTAG+AGG - chr3_2:25660866-25660885 Msa0400890:intron 20.0%
!!! AATTGAAGGAAAATTTTAGA+GGG - chr3_2:25660867-25660886 Msa0400890:intron 20.0%
!!! TTGAAAGTTGATATATTTAG+AGG - chr3_2:25660897-25660916 Msa0400890:intron 20.0%
!!! TGAAAGTTGATATATTTAGA+GGG - chr3_2:25660898-25660917 Msa0400890:intron 20.0%
!! CATATTTAATCCAATTTAAC+TGG - chr3_2:25660929-25660948 Msa0400890:intron 20.0%
!! CTGAAAACATATCAATAAAT+AGG - chr3_2:25661267-25661286 Msa0400890:intron 20.0%
!!! TTATCTTTTATTGTAGTTTG+TGG - chr3_2:25661339-25661358 Msa0400890:intron 20.0%
!!! TTGCATATTTGAATTTTCTT+TGG - chr3_2:25661378-25661397 Msa0400890:intron 20.0%
!!! TGCATATTTGAATTTTCTTT+GGG - chr3_2:25661379-25661398 Msa0400890:intron 20.0%
!!! TATTGATTAATTAGTTGTTG+TGG - chr3_2:25661473-25661492 Msa0400890:intron 20.0%
!!! AATTTAAGGTTTCAGAAATT+AGG + chr3_2:25661526-25661545 None:intergenic 20.0%
!!! TTCTGAAACCTTAAATTATT+AGG - chr3_2:25661529-25661548 Msa0400890:intron 20.0%
!! AACAATGAAAACATTATTAG+AGG + chr3_2:25661577-25661596 None:intergenic 20.0%
!! GTTATTGAACATTCTTAATT+CGG - chr3_2:25661594-25661613 Msa0400890:intron 20.0%
!! ACATACTATTTCAATTTGAA+TGG - chr3_2:25661757-25661776 Msa0400890:intron 20.0%
!! CATTATTATTTGTTTAATCC+AGG - chr3_2:25661843-25661862 Msa0400890:intron 20.0%
!!! ATAACTTATATACGTGTTTT+TGG + chr3_2:25662257-25662276 None:intergenic 20.0%
!! ATTGAATATCATTGGTATAA+AGG - chr3_2:25663243-25663262 Msa0400890:intron 20.0%
!! GTGTTAATGTTATAATTCAT+TGG + chr3_2:25663304-25663323 None:intergenic 20.0%
!!! GTTTTTTTCTTTCTCAAATA+TGG + chr3_2:25663368-25663387 None:intergenic 20.0%
!! TTGTATATTATTATGAACTG+TGG + chr3_2:25663471-25663490 None:intergenic 20.0%
!!! CATTATTATTTCTAATAGCA+CGG - chr3_2:25663518-25663537 Msa0400890:intron 20.0%
!!! CTTTTAACAAATAATAGGAA+AGG + chr3_2:25663627-25663646 None:intergenic 20.0%
!!! TTAAAAGTATGAATATGTAC+TGG - chr3_2:25663640-25663659 Msa0400890:intron 20.0%
!! GGAAAAATAGAGAAAAAAAT+TGG + chr3_2:25663885-25663904 None:intergenic 20.0%
!!! TAAAAAAAAAATAATGGGGA+AGG - chr3_2:25664376-25664395 Msa0400890:intron 20.0%
!!! AAAAAAAAAATAATGGGGAA+GGG - chr3_2:25664377-25664396 Msa0400890:intron 20.0%
!!! TATTTTTTCGTCAGTATTAT+GGG - chr3_2:25664705-25664724 Msa0400890:CDS 20.0%
!!! GATTAATTTTGATGCATTTT+CGG - chr3_2:25665381-25665400 Msa0400890:intron 20.0%
!!! CAATGTACAAATATTTTACA+AGG + chr3_2:25665539-25665558 None:intergenic 20.0%
!! TAAAAATCACATTGTAGAAA+TGG - chr3_2:25665800-25665819 Msa0400890:intron 20.0%
!! TGTACATTACAAATCAAAAA+AGG + chr3_2:25666149-25666168 None:intergenic 20.0%
!!! TTTTGATTTGTAATGTACAA+TGG - chr3_2:25666150-25666169 Msa0400890:intron 20.0%
!!! TTTGATTTGTAATGTACAAT+GGG - chr3_2:25666151-25666170 Msa0400890:intron 20.0%
!! AATTCAAGTACATTTAGATA+AGG + chr3_2:25666257-25666276 None:intergenic 20.0%
!!! AACTAAATTCAAACACTTTT+AGG + chr3_2:25666287-25666306 None:intergenic 20.0%
! TTAACAAAAACGGGTAAAAA+AGG + chr3_2:25655486-25655505 None:intergenic 25.0%
!! ATTGGTAATTACACATCAAT+TGG - chr3_2:25655704-25655723 Msa0400890:three_prime_UTR 25.0%
! TTATATTTGTCCTATAAGCA+CGG + chr3_2:25655867-25655886 None:intergenic 25.0%
!!! TTTGTAGTTGCAATTTGTTA+AGG - chr3_2:25656418-25656437 Msa0400890:intron 25.0%
!! AAATTTGAGTTAAAAGACCA+GGG - chr3_2:25656445-25656464 Msa0400890:intron 25.0%
! AAGAAGAATAAGAGTGAAAA+TGG - chr3_2:25656580-25656599 Msa0400890:three_prime_UTR 25.0%
!! GTATACAAAGCCATTATTTT+GGG - chr3_2:25656602-25656621 Msa0400890:three_prime_UTR 25.0%
!!! TTATTTTTGTTTCTTATGCC+AGG - chr3_2:25656651-25656670 Msa0400890:three_prime_UTR 25.0%
! CTGCATGTAATATTTAACTA+CGG + chr3_2:25656981-25657000 None:intergenic 25.0%
! TTCATACAATGAACTATGTA+AGG - chr3_2:25657153-25657172 Msa0400890:intron 25.0%
!! CAAATAGTGTTGTTAAGAAA+AGG + chr3_2:25657179-25657198 None:intergenic 25.0%
! ACTGTAGTATAACATAATGT+AGG - chr3_2:25657382-25657401 Msa0400890:intron 25.0%
! CTGTAGTATAACATAATGTA+GGG - chr3_2:25657383-25657402 Msa0400890:intron 25.0%
! TTTATATAGTGTGTCAAGTA+AGG - chr3_2:25657461-25657480 Msa0400890:intron 25.0%
! TTATATAGTGTGTCAAGTAA+GGG - chr3_2:25657462-25657481 Msa0400890:intron 25.0%
! AACACAAAATAGGGAATAAA+CGG + chr3_2:25657633-25657652 None:intergenic 25.0%
! TTTCATAATTCACTCAAGAA+AGG - chr3_2:25657864-25657883 Msa0400890:intron 25.0%
! AAGTATTCATATCTGCAATA+AGG + chr3_2:25658011-25658030 None:intergenic 25.0%
!! TGCAGATATGAATACTTTTA+TGG - chr3_2:25658014-25658033 Msa0400890:intron 25.0%
! TTGATTGTAAATGTTAAGTC+AGG + chr3_2:25658056-25658075 None:intergenic 25.0%
! GACTTAACATTTACAATCAA+TGG - chr3_2:25658056-25658075 Msa0400890:intron 25.0%
! TTAACATTTACAATCAATGG+TGG - chr3_2:25658059-25658078 Msa0400890:intron 25.0%
! ATTTATTCATAAGCAAACTC+TGG - chr3_2:25658158-25658177 Msa0400890:intron 25.0%
!! TTTTCAATAATTAGAGAGCT+TGG - chr3_2:25658289-25658308 Msa0400890:intron 25.0%
!!! TAGTTTTATTGAGTAGTCAA+GGG + chr3_2:25658324-25658343 None:intergenic 25.0%
!!! ATAGTTTTATTGAGTAGTCA+AGG + chr3_2:25658325-25658344 None:intergenic 25.0%
! TTTGTATGTTCAAACTTTGT+TGG - chr3_2:25658633-25658652 Msa0400890:intron 25.0%
!!! GTTGGTTTTTTAAAATGAGT+TGG - chr3_2:25658651-25658670 Msa0400890:intron 25.0%
! TTTCCAATCAAAAGAAAAGA+GGG + chr3_2:25658817-25658836 None:intergenic 25.0%
!! AAAGTTTTTCATCTTCTGAT+GGG - chr3_2:25658834-25658853 Msa0400890:intron 25.0%
! AATAATTTACACAAGACAAC+GGG + chr3_2:25659193-25659212 None:intergenic 25.0%
!! TTATTATCAAGTACCCATTT+TGG - chr3_2:25659281-25659300 Msa0400890:intron 25.0%
! CGTGATATCTATAATATTGA+AGG - chr3_2:25659589-25659608 Msa0400890:intron 25.0%
!! ATTTGTTACTTACTTATGGT+AGG + chr3_2:25659902-25659921 None:intergenic 25.0%
!! AAGCATTTGTTACTTACTTA+TGG + chr3_2:25659906-25659925 None:intergenic 25.0%
! GAATCTGCATTTCAATAATA+GGG - chr3_2:25659937-25659956 Msa0400890:intron 25.0%
! AATCTGCATTTCAATAATAG+GGG - chr3_2:25659938-25659957 Msa0400890:intron 25.0%
! AAGAAAATAGCATAATCTCT+TGG + chr3_2:25660182-25660201 None:intergenic 25.0%
! ATAAAATTGTTTCCCAATTC+TGG - chr3_2:25660291-25660310 Msa0400890:intron 25.0%
! AATATAGAAAATATTCCAGC+CGG + chr3_2:25660425-25660444 None:intergenic 25.0%
! TGAAAGTCGGTATATTTATA+GGG + chr3_2:25660484-25660503 None:intergenic 25.0%
! ATTAAAACCCGAAAATTTAG+AGG - chr3_2:25660837-25660856 Msa0400890:intron 25.0%
! TTAAAACCCGAAAATTTAGA+GGG - chr3_2:25660838-25660857 Msa0400890:intron 25.0%
!! CAGTTTTCTCTTAAAAGTAA+AGG + chr3_2:25661111-25661130 None:intergenic 25.0%
! ATCATGATCTAAACTTTGTT+TGG - chr3_2:25661193-25661212 Msa0400890:intron 25.0%
! GACTTCAACCTAATAATTTA+AGG + chr3_2:25661540-25661559 None:intergenic 25.0%
! GGTTTATATAAACTGATACT+TGG - chr3_2:25661615-25661634 Msa0400890:intron 25.0%
! TAGAAATAGATGTTCTTGTT+GGG + chr3_2:25662088-25662107 None:intergenic 25.0%
! ATAGAAATAGATGTTCTTGT+TGG + chr3_2:25662089-25662108 None:intergenic 25.0%
! GGTCTTAAATATAAGCAAAA+AGG - chr3_2:25662118-25662137 Msa0400890:intron 25.0%
! GCAATCAAATGTATATTCTT+TGG + chr3_2:25662180-25662199 None:intergenic 25.0%
! AGATTCAACAGAAAATAACA+TGG - chr3_2:25662281-25662300 Msa0400890:intron 25.0%
!! CATCTTCCCAAAATTTTAAA+TGG - chr3_2:25662373-25662392 Msa0400890:intron 25.0%
!!! TCACATTTTAATGTGTGATA+AGG + chr3_2:25662563-25662582 None:intergenic 25.0%
!!! TATAAAAAGCATCAAGTCTT+TGG + chr3_2:25662715-25662734 None:intergenic 25.0%
!!! TTATGTTGCTGGTTTTATAT+GGG + chr3_2:25663123-25663142 None:intergenic 25.0%
!!! TTTATGTTGCTGGTTTTATA+TGG + chr3_2:25663124-25663143 None:intergenic 25.0%
! ATAAAACCAGCAACATAAAA+AGG - chr3_2:25663125-25663144 Msa0400890:intron 25.0%
! ATGATATTCAATGCCTATAT+GGG + chr3_2:25663235-25663254 None:intergenic 25.0%
! AATGATATTCAATGCCTATA+TGG + chr3_2:25663236-25663255 None:intergenic 25.0%
!!! ATATAGGCATTGAATATCAT+TGG - chr3_2:25663235-25663254 Msa0400890:intron 25.0%
! ATTATGAACTGTGGTAATTA+GGG + chr3_2:25663462-25663481 None:intergenic 25.0%
! TATTATGAACTGTGGTAATT+AGG + chr3_2:25663463-25663482 None:intergenic 25.0%
! TAATGTAAATAGGGTAACTA+TGG + chr3_2:25663503-25663522 None:intergenic 25.0%
! TAGGAAAGGAAAATAAAAGT+GGG + chr3_2:25663613-25663632 None:intergenic 25.0%
! ATAGGAAAGGAAAATAAAAG+TGG + chr3_2:25663614-25663633 None:intergenic 25.0%
! TCATTGGCATCTTAATTAAA+TGG + chr3_2:25663722-25663741 None:intergenic 25.0%
! TAGCAGAAAATGAATATCAT+TGG + chr3_2:25663738-25663757 None:intergenic 25.0%
!! ATTTTCATTCATGGATAGTA+AGG - chr3_2:25663908-25663927 Msa0400890:CDS 25.0%
!! TTTTCATTCATGGATAGTAA+GGG - chr3_2:25663909-25663928 Msa0400890:CDS 25.0%
! ACCAATTAAGACATCTAATA+AGG - chr3_2:25664017-25664036 Msa0400890:intron 25.0%
! TCCTTATTAGATGTCTTAAT+TGG + chr3_2:25664021-25664040 None:intergenic 25.0%
! TATGATGTAATCTAGTAACT+TGG - chr3_2:25664108-25664127 Msa0400890:intron 25.0%
! AAGAAATAAATTGTTGTGTC+TGG - chr3_2:25664137-25664156 Msa0400890:intron 25.0%
!! GTGGTAAATGACATTATTTT+TGG - chr3_2:25664225-25664244 Msa0400890:intron 25.0%
!!! GTATTTTTTCGTCAGTATTA+TGG - chr3_2:25664704-25664723 Msa0400890:CDS 25.0%
! AGAAAAAGCTAACAACAATA+CGG + chr3_2:25664745-25664764 None:intergenic 25.0%
!!! TCTTTTGTTTACTGTAACTA+CGG - chr3_2:25664882-25664901 Msa0400890:CDS 25.0%
! TGCATATAACAGATAACAAA+AGG + chr3_2:25665132-25665151 None:intergenic 25.0%
! CTTAAAAGTCATACAAAAGA+TGG + chr3_2:25665441-25665460 None:intergenic 25.0%
! GAATGAGATAAGATAATGTA+TGG - chr3_2:25665675-25665694 Msa0400890:intron 25.0%
! AGTGGAAGAATGAATATATA+TGG + chr3_2:25665742-25665761 None:intergenic 25.0%
!! ATGTGATTTTTATTCTGAAC+TGG + chr3_2:25665792-25665811 None:intergenic 25.0%
!!! TTGATTTGTAATGTACAATG+GGG - chr3_2:25666152-25666171 Msa0400890:intron 25.0%
! ACATATCACTACTTTATAGT+AGG - chr3_2:25666349-25666368 Msa0400890:intron 25.0%
! CATATCACTACTTTATAGTA+GGG - chr3_2:25666350-25666369 Msa0400890:intron 25.0%
! ATATCACTACTTTATAGTAG+GGG - chr3_2:25666351-25666370 Msa0400890:intron 25.0%
! TATCTGTTGAGAAAAATGTT+CGG - chr3_2:25666443-25666462 Msa0400890:five_prime_UTR 25.0%
AAACGGGTAAAAAAGGAAAA+CGG + chr3_2:25655479-25655498 None:intergenic 30.0%
TTCAGTGTAATTACATGTGT+CGG - chr3_2:25655813-25655832 Msa0400890:three_prime_UTR 30.0%
GGTAGTTATATACATCTTTG+AGG - chr3_2:25656005-25656024 Msa0400890:three_prime_UTR 30.0%
! GTTTTCTGCTTATACTTCAA+AGG - chr3_2:25656048-25656067 Msa0400890:three_prime_UTR 30.0%
CATGATGTTCTGATTATACA+TGG - chr3_2:25656196-25656215 Msa0400890:intron 30.0%
TGTTTATCAAAAGGGTAATC+TGG - chr3_2:25656346-25656365 Msa0400890:intron 30.0%
TAAATTAGGAAGGAATTGTG+TGG - chr3_2:25656386-25656405 Msa0400890:intron 30.0%
! GAAATTTGAGTTAAAAGACC+AGG - chr3_2:25656444-25656463 Msa0400890:intron 30.0%
ACTATTAATCAACTGATGCT+TGG + chr3_2:25656544-25656563 None:intergenic 30.0%
! GGTATACAAAGCCATTATTT+TGG - chr3_2:25656601-25656620 Msa0400890:three_prime_UTR 30.0%
AACAATCCATCCCAAAATAA+TGG + chr3_2:25656615-25656634 None:intergenic 30.0%
AGGCAGTAATTTAGAGAATT+TGG - chr3_2:25656726-25656745 Msa0400890:CDS 30.0%
TATTCATCATCGTGCATTAA+TGG - chr3_2:25657019-25657038 Msa0400890:intron 30.0%
ATTCATCATCGTGCATTAAT+GGG - chr3_2:25657020-25657039 Msa0400890:intron 30.0%
!! TATACAAGGAAAGTTTGTTG+CGG - chr3_2:25657054-25657073 Msa0400890:intron 30.0%
ATTTGTCTATTGATGTCAGA+AGG - chr3_2:25657194-25657213 Msa0400890:intron 30.0%
!!! TTTTTTGAATTTGGCTCTGA+AGG - chr3_2:25657232-25657251 Msa0400890:intron 30.0%
!!! TTTTTGAATTTGGCTCTGAA+GGG - chr3_2:25657233-25657252 Msa0400890:intron 30.0%
ACAACTTATAAGCCTTAGTT+GGG + chr3_2:25657301-25657320 None:intergenic 30.0%
AACAACTTATAAGCCTTAGT+TGG + chr3_2:25657302-25657321 None:intergenic 30.0%
! TTAGGGTGTGTGATTTTAAA+TGG - chr3_2:25657417-25657436 Msa0400890:intron 30.0%
! TAGGGTGTGTGATTTTAAAT+GGG - chr3_2:25657418-25657437 Msa0400890:intron 30.0%
! TGATTTTAAATGGGCAAATG+AGG - chr3_2:25657427-25657446 Msa0400890:intron 30.0%
TATATAGTGTGTCAAGTAAG+GGG - chr3_2:25657463-25657482 Msa0400890:intron 30.0%
!! ATATAGCTTGTAAGAGTATC+CGG - chr3_2:25657542-25657561 Msa0400890:intron 30.0%
! ATATCTTCATCATTGACTAC+AGG - chr3_2:25657601-25657620 Msa0400890:intron 30.0%
! TAACTCTAGTTTGTAGCAAA+TGG - chr3_2:25657683-25657702 Msa0400890:intron 30.0%
TGCTACTACTTCTTAGAATT+TGG - chr3_2:25657729-25657748 Msa0400890:intron 30.0%
GCTACTACTTCTTAGAATTT+GGG - chr3_2:25657730-25657749 Msa0400890:intron 30.0%
! TGGTATTACTTGTATTGATG+AGG - chr3_2:25658079-25658098 Msa0400890:intron 30.0%
ATTATTGAAAATGAGAGACC+TGG + chr3_2:25658280-25658299 None:intergenic 30.0%
AAGTCCTTAATTACACAGTA+TGG + chr3_2:25658369-25658388 None:intergenic 30.0%
ATACTGTGTAATTAAGGACT+TGG - chr3_2:25658368-25658387 Msa0400890:intron 30.0%
! TTTTATGATCACACTATGAC+TGG - chr3_2:25658435-25658454 Msa0400890:intron 30.0%
TTTATGATCACACTATGACT+GGG - chr3_2:25658436-25658455 Msa0400890:intron 30.0%
!!! ATGTTGTGTTTGTGCTTTTT+TGG - chr3_2:25658537-25658556 Msa0400890:intron 30.0%
GAAAATGACTTGAAACACTA+TGG + chr3_2:25658597-25658616 None:intergenic 30.0%
! TTAAAATGAGTTGGCTATAC+AGG - chr3_2:25658660-25658679 Msa0400890:intron 30.0%
!! TTTTCATTTTGGTCTGTCTA+CGG - chr3_2:25658714-25658733 Msa0400890:intron 30.0%
!! TTTATGTTGCTTTGGCAAAT+AGG - chr3_2:25658767-25658786 Msa0400890:intron 30.0%
!! TTATGTTGCTTTGGCAAATA+GGG - chr3_2:25658768-25658787 Msa0400890:intron 30.0%
! TTTCCCTCTTTTCTTTTGAT+TGG - chr3_2:25658811-25658830 Msa0400890:intron 30.0%
CTTTCCAATCAAAAGAAAAG+AGG + chr3_2:25658818-25658837 None:intergenic 30.0%
! GAAAGTTTTTCATCTTCTGA+TGG - chr3_2:25658833-25658852 Msa0400890:intron 30.0%
! AAGTTTTTCATCTTCTGATG+GGG - chr3_2:25658835-25658854 Msa0400890:intron 30.0%
AAAATACTGATCCATCAACT+AGG + chr3_2:25658923-25658942 None:intergenic 30.0%
!!! AGTTGATGGATCAGTATTTT+TGG - chr3_2:25658923-25658942 Msa0400890:intron 30.0%
GAAAATGTCCAACTTTATTG+TGG + chr3_2:25658955-25658974 None:intergenic 30.0%
AGTTATGAAGTTGCATGAAA+TGG + chr3_2:25658979-25658998 None:intergenic 30.0%
! TTCATAACTGATTTACTCCT+GGG - chr3_2:25658990-25659009 Msa0400890:intron 30.0%
TGGAGATCAATAACCTAATT+TGG - chr3_2:25659019-25659038 Msa0400890:intron 30.0%
AACCTAATTTGGTAAATCCT+CGG - chr3_2:25659030-25659049 Msa0400890:intron 30.0%
CTTAATTAGAATCTAAACCG+AGG + chr3_2:25659050-25659069 None:intergenic 30.0%
CTCGGTTTAGATTCTAATTA+AGG - chr3_2:25659048-25659067 Msa0400890:intron 30.0%
GCCCTTATATTTACTGAATA+TGG - chr3_2:25659133-25659152 Msa0400890:intron 30.0%
AATGAATTTACGCAAGACAA+CGG + chr3_2:25659229-25659248 None:intergenic 30.0%
CTGTATAATGGTTCCAAAAT+GGG + chr3_2:25659297-25659316 None:intergenic 30.0%
TCTGTATAATGGTTCCAAAA+TGG + chr3_2:25659298-25659317 None:intergenic 30.0%
TATAAAGGGACTCTGTATAA+TGG + chr3_2:25659309-25659328 None:intergenic 30.0%
TGAATATCATGATACATGAC+TGG - chr3_2:25659396-25659415 Msa0400890:intron 30.0%
!! AGTCTAAAGTGATTTTGCAT+AGG + chr3_2:25659449-25659468 None:intergenic 30.0%
! CAATTTTATCATATGTTGGG+TGG + chr3_2:25659494-25659513 None:intergenic 30.0%
ATTATTGGGCTTCATTAGAT+TGG - chr3_2:25659613-25659632 Msa0400890:intron 30.0%
TTATTGGGCTTCATTAGATT+GGG - chr3_2:25659614-25659633 Msa0400890:intron 30.0%
AACAAATGCTTTCAAACATC+AGG - chr3_2:25659915-25659934 Msa0400890:CDS 30.0%
GGAATCTGCATTTCAATAAT+AGG - chr3_2:25659936-25659955 Msa0400890:intron 30.0%
CAATCACATGATCATTTATG+AGG + chr3_2:25659984-25660003 None:intergenic 30.0%
TATTCTCGTAGAGTTAAAAC+TGG - chr3_2:25660082-25660101 Msa0400890:CDS 30.0%
TTAAAACTGGAGAGAAGAAT+GGG - chr3_2:25660095-25660114 Msa0400890:CDS 30.0%
AAGTAATAAGCTCAGAGAAA+AGG + chr3_2:25660208-25660227 None:intergenic 30.0%
! TTTTCTCTGAGCTTATTACT+TGG - chr3_2:25660207-25660226 Msa0400890:intron 30.0%
TTTCTCTGAGCTTATTACTT+GGG - chr3_2:25660208-25660227 Msa0400890:intron 30.0%
CTGAAAGTCGGTATATTTAT+AGG + chr3_2:25660485-25660504 None:intergenic 30.0%
! ATGAGCTTTTGTAAAAAAGC+AGG + chr3_2:25660575-25660594 None:intergenic 30.0%
! TTTTGGTCCCTCTAAATTTT+CGG + chr3_2:25660848-25660867 None:intergenic 30.0%
! TTTGACGTGGATATATTTTC+TGG - chr3_2:25660955-25660974 Msa0400890:intron 30.0%
! TTTTCAACTTCTGATAACAG+AGG - chr3_2:25661010-25661029 Msa0400890:intron 30.0%
! ATCTAAACTTTGTTTGGTCA+TGG - chr3_2:25661199-25661218 Msa0400890:intron 30.0%
! TTGAATTTTCTTTGGGCTAA+AGG - chr3_2:25661386-25661405 Msa0400890:intron 30.0%
! TGAATTTTCTTTGGGCTAAA+GGG - chr3_2:25661387-25661406 Msa0400890:intron 30.0%
!! TGTGCTTTGATTTGAAAATG+AGG - chr3_2:25661433-25661452 Msa0400890:intron 30.0%
!! AACGTTGATAGTGCAATTTA+TGG - chr3_2:25661690-25661709 Msa0400890:intron 30.0%
ATTTATGGTGTACCAAGTAT+TGG - chr3_2:25661705-25661724 Msa0400890:intron 30.0%
CTTGAGAAATACCAAGTATA+CGG - chr3_2:25661868-25661887 Msa0400890:intron 30.0%
TGTTGCTACAATATGGATTT+CGG - chr3_2:25661899-25661918 Msa0400890:CDS 30.0%
!! ATCTATTTCTATACTCCCTT+CGG - chr3_2:25662097-25662116 Msa0400890:intron 30.0%
! TGCTTATATTTAAGACCGAA+GGG + chr3_2:25662115-25662134 None:intergenic 30.0%
! TTGCTTATATTTAAGACCGA+AGG + chr3_2:25662116-25662135 None:intergenic 30.0%
! AGCAAAAAGGTACATGTATT+TGG - chr3_2:25662131-25662150 Msa0400890:intron 30.0%
TATACATTTGATTGCACAAG+CGG - chr3_2:25662185-25662204 Msa0400890:intron 30.0%
ACAGAAAATAACATGGAATG+TGG - chr3_2:25662288-25662307 Msa0400890:intron 30.0%
TAACTCAATAACCAGAAGTA+AGG - chr3_2:25662346-25662365 Msa0400890:intron 30.0%
! GATATTAGCTTGAAGTAACA+AGG - chr3_2:25662395-25662414 Msa0400890:intron 30.0%
TCTGCAATACAATTATGTTG+TGG - chr3_2:25662458-25662477 Msa0400890:intron 30.0%
!! AAGTTGATGAATCATCTCTT+TGG - chr3_2:25662496-25662515 Msa0400890:intron 30.0%
TCTTTACTAACTTCTTCAAG+TGG + chr3_2:25662738-25662757 None:intergenic 30.0%
CTTGAAGAAGTTAGTAAAGA+TGG - chr3_2:25662738-25662757 Msa0400890:intron 30.0%
! TTATCGCCTTATGAGATTTT+GGG + chr3_2:25663073-25663092 None:intergenic 30.0%
! TTTATCGCCTTATGAGATTT+TGG + chr3_2:25663074-25663093 None:intergenic 30.0%
!! CATTCCCAAATGTTTTTACA+TGG - chr3_2:25663160-25663179 Msa0400890:intron 30.0%
CGATCCATGTAAAAACATTT+GGG + chr3_2:25663167-25663186 None:intergenic 30.0%
TCGATCCATGTAAAAACATT+TGG + chr3_2:25663168-25663187 None:intergenic 30.0%
TGATATTCAATGCCTATATG+GGG + chr3_2:25663234-25663253 None:intergenic 30.0%
!! TTTTTACGTTGTTTGGTAGT+AGG + chr3_2:25663276-25663295 None:intergenic 30.0%
GAGAAAGAAAAAAACGAAAG+AGG - chr3_2:25663373-25663392 Msa0400890:intron 30.0%
AGCACGGATATAGAAAATAA+AGG - chr3_2:25663534-25663553 Msa0400890:intron 30.0%
TCAAGCAAATAAATGGAAGA+TGG + chr3_2:25663690-25663709 None:intergenic 30.0%
GAATGGAAAAAACCAAGTAA+AGG + chr3_2:25663790-25663809 None:intergenic 30.0%
! TTTTCCCTGATTTTCATTCA+TGG - chr3_2:25663899-25663918 Msa0400890:CDS 30.0%
CTATCCATGAATGAAAATCA+GGG + chr3_2:25663906-25663925 None:intergenic 30.0%
ACTATCCATGAATGAAAATC+AGG + chr3_2:25663907-25663926 None:intergenic 30.0%
TTTCATTCATGGATAGTAAG+GGG - chr3_2:25663910-25663929 Msa0400890:CDS 30.0%
GAGCTAATTTGGTTGAAATA+AGG - chr3_2:25664203-25664222 Msa0400890:intron 30.0%
CTAATTTGGTTGAAATAAGG+TGG - chr3_2:25664206-25664225 Msa0400890:intron 30.0%
!! CTTTTAGTTAACACTAACGT+GGG + chr3_2:25664285-25664304 None:intergenic 30.0%
GGTTGTAAAATAGTCATTAG+TGG + chr3_2:25664426-25664445 None:intergenic 30.0%
! TTTGTAACCTAAAAGGTACA+GGG + chr3_2:25664467-25664486 None:intergenic 30.0%
! TTTTAGTGCCTGCAAATATA+TGG - chr3_2:25664558-25664577 Msa0400890:intron 30.0%
!!! TTAGTGTCTACCCATTTTTT+TGG - chr3_2:25664651-25664670 Msa0400890:CDS 30.0%
!!! TACCCATTTTTTTGGTTATG+CGG - chr3_2:25664659-25664678 Msa0400890:CDS 30.0%
TACCAAATTACATTACACGT+TGG + chr3_2:25664687-25664706 None:intergenic 30.0%
GTGCTTATTAAAAAGTTAGC+CGG - chr3_2:25664782-25664801 Msa0400890:intron 30.0%
CATAAAATTGACCTACTAAC+CGG + chr3_2:25664804-25664823 None:intergenic 30.0%
AGATATGTACAAATGCCAAA+AGG + chr3_2:25664861-25664880 None:intergenic 30.0%
! AAATGATTTTACTGTCTGCA+TGG + chr3_2:25664963-25664982 None:intergenic 30.0%
!! AGTTTAAGTAAAAGCACTAG+TGG - chr3_2:25665183-25665202 Msa0400890:intron 30.0%
AAAACCAACAGTAAAAGCAA+AGG + chr3_2:25665226-25665245 None:intergenic 30.0%
!!! TTTGCTTTTACTGTTGGTTT+TGG - chr3_2:25665225-25665244 Msa0400890:intron 30.0%
TTATCTGTTGAGAAAAATGC+TGG - chr3_2:25665267-25665286 Msa0400890:intron 30.0%
TATCTGTTGAGAAAAATGCT+GGG - chr3_2:25665268-25665287 Msa0400890:intron 30.0%
CAAAAAAAAAAGACCTTCTG+TGG + chr3_2:25665706-25665725 None:intergenic 30.0%
TTTGCTCTTATTCTTACTGT+TGG - chr3_2:25666393-25666412 Msa0400890:five_prime_UTR 30.0%
!!! CTTATTCTTACTGTTGGTTT+TGG - chr3_2:25666399-25666418 Msa0400890:five_prime_UTR 30.0%
! AAACTTTTCAATTTTGCCGC+TGG - chr3_2:25655392-25655411 Msa0400890:three_prime_UTR 35.0%
TCAAAACATGGGTTTGAGAA+GGG + chr3_2:25655526-25655545 None:intergenic 35.0%
AAAATCAACCCTAACTCAAC+TGG + chr3_2:25655654-25655673 None:intergenic 35.0%
CAATTGGACAATATGAAGCA+CGG - chr3_2:25655720-25655739 Msa0400890:three_prime_UTR 35.0%
!!! TTTTTTTGTGTGCAGGTTGT+TGG - chr3_2:25655984-25656003 Msa0400890:three_prime_UTR 35.0%
TTGAGGAATTTGTGCTAGTT+AGG - chr3_2:25656022-25656041 Msa0400890:three_prime_UTR 35.0%
TGAGGAATTTGTGCTAGTTA+GGG - chr3_2:25656023-25656042 Msa0400890:three_prime_UTR 35.0%
AACATACAGTGTAGTTGCAA+TGG - chr3_2:25656075-25656094 Msa0400890:three_prime_UTR 35.0%
AAGATGATTATCTTCCTCCT+TGG - chr3_2:25656101-25656120 Msa0400890:three_prime_UTR 35.0%
ATTATCTTCCTCCTTGGTTT+AGG - chr3_2:25656107-25656126 Msa0400890:three_prime_UTR 35.0%
AAGCATAGATACCTAAACCA+AGG + chr3_2:25656121-25656140 None:intergenic 35.0%
TTATCTGTCCAATCCATCAT+TGG + chr3_2:25656251-25656270 None:intergenic 35.0%
GTCTCATATCAAAACATGCT+TGG - chr3_2:25656291-25656310 Msa0400890:intron 35.0%
!! AAAACATGCTTGGCTCTATA+CGG - chr3_2:25656301-25656320 Msa0400890:intron 35.0%
AAAGACCAGGGTTCAAATAT+CGG - chr3_2:25656457-25656476 Msa0400890:intron 35.0%
ACTGATGCTTGGAAACAATA+AGG + chr3_2:25656533-25656552 None:intergenic 35.0%
!!! ACAAAGCCATTATTTTGGGA+TGG - chr3_2:25656606-25656625 Msa0400890:three_prime_UTR 35.0%
! TTTGAAGCACAATAGGATGT+TGG + chr3_2:25656702-25656721 None:intergenic 35.0%
CATCCTATTGTGCTTCAAAT+CGG - chr3_2:25656703-25656722 Msa0400890:CDS 35.0%
TTCATCATCGTGCATTAATG+GGG - chr3_2:25657021-25657040 Msa0400890:intron 35.0%
GGGGAATTCTAATGTATACA+AGG - chr3_2:25657040-25657059 Msa0400890:intron 35.0%
ACTGACAGGTACATTTGTAT+TGG + chr3_2:25657101-25657120 None:intergenic 35.0%
CAACTTATAAGCCTTAGTTG+GGG + chr3_2:25657300-25657319 None:intergenic 35.0%
TAACATAATGTAGGGACATG+CGG - chr3_2:25657391-25657410 Msa0400890:intron 35.0%
! TTTTAAATGGGCAAATGAGG+TGG - chr3_2:25657430-25657449 Msa0400890:intron 35.0%
TTTAAATGGGCAAATGAGGT+GGG - chr3_2:25657431-25657450 Msa0400890:intron 35.0%
ATATAGTGTGTCAAGTAAGG+GGG - chr3_2:25657464-25657483 Msa0400890:intron 35.0%
CTATATGGCTAAAGAATACG+AGG + chr3_2:25657528-25657547 None:intergenic 35.0%
GGATACTCTTACAAGCTATA+TGG + chr3_2:25657543-25657562 None:intergenic 35.0%
TAGTAGCAAACTAGCATCTA+AGG + chr3_2:25657717-25657736 None:intergenic 35.0%
TACTTCTTAGAATTTGGGCT+TGG - chr3_2:25657735-25657754 Msa0400890:intron 35.0%
ACTTCTTAGAATTTGGGCTT+GGG - chr3_2:25657736-25657755 Msa0400890:intron 35.0%
! CAGACAAACAACAAGCTTTT+AGG + chr3_2:25657797-25657816 None:intergenic 35.0%
GTCAGGTGATTTCATTTACA+AGG - chr3_2:25657816-25657835 Msa0400890:intron 35.0%
TGAATTATGAAATGCCTAGC+AGG + chr3_2:25657856-25657875 None:intergenic 35.0%
TTTATTGGGACATACTTCAG+TGG + chr3_2:25657934-25657953 None:intergenic 35.0%
TTTATTGAGTAGTCAAGGGA+AGG + chr3_2:25658320-25658339 None:intergenic 35.0%
CTTAATTACACAGTATGGCA+AGG + chr3_2:25658364-25658383 None:intergenic 35.0%
CTTGCCATACTGTGTAATTA+AGG - chr3_2:25658362-25658381 Msa0400890:intron 35.0%
GTTAACTGCACATGTAAGTA+GGG + chr3_2:25658569-25658588 None:intergenic 35.0%
GACTTGAAACACTATGGAAT+GGG + chr3_2:25658591-25658610 None:intergenic 35.0%
TGACTTGAAACACTATGGAA+TGG + chr3_2:25658592-25658611 None:intergenic 35.0%
!! TTTCATTTTGGTCTGTCTAC+GGG - chr3_2:25658715-25658734 Msa0400890:intron 35.0%
! TAGGTTTTTCCACGTTTTTG+CGG - chr3_2:25658878-25658897 Msa0400890:intron 35.0%
TCCATCAACTAGGACTATAT+GGG + chr3_2:25658913-25658932 None:intergenic 35.0%
ATCCATCAACTAGGACTATA+TGG + chr3_2:25658914-25658933 None:intergenic 35.0%
!!! TGGATCAGTATTTTTGGTTC+AGG - chr3_2:25658929-25658948 Msa0400890:intron 35.0%
! CTTCATAACTGATTTACTCC+TGG - chr3_2:25658989-25659008 Msa0400890:intron 35.0%
AACCGAGGATTTACCAAATT+AGG + chr3_2:25659035-25659054 None:intergenic 35.0%
TTTGTTCACAGTTGAAGTAG+TGG - chr3_2:25659093-25659112 Msa0400890:intron 35.0%
!! AGTGGATTACTGATTGATTG+AGG - chr3_2:25659111-25659130 Msa0400890:intron 35.0%
CACAAGTAAAACTCAAGGTA+TGG + chr3_2:25659253-25659272 None:intergenic 35.0%
! CATACCTTGAGTTTTACTTG+TGG - chr3_2:25659251-25659270 Msa0400890:intron 35.0%
! AAACTTTAGAAGCTGTTCAC+TGG + chr3_2:25659664-25659683 None:intergenic 35.0%
ACAATCAAAATCCACGTGTA+AGG + chr3_2:25659825-25659844 None:intergenic 35.0%
!! ATCAATGCAGCTCTAAAGAT+CGG - chr3_2:25659847-25659866 Msa0400890:intron 35.0%
ATCATTTATGAGGAGTCGAA+GGG + chr3_2:25659974-25659993 None:intergenic 35.0%
! CTCTACGAGAATACACTTTT+AGG + chr3_2:25660075-25660094 None:intergenic 35.0%
GTTAAAACTGGAGAGAAGAA+TGG - chr3_2:25660094-25660113 Msa0400890:CDS 35.0%
TAATAAGCTCAGAGAAAAGG+CGG + chr3_2:25660205-25660224 None:intergenic 35.0%
ATTGTTTCCCAATTCTGGAT+AGG - chr3_2:25660296-25660315 Msa0400890:intron 35.0%
AGTCATTCCTATCCAGAATT+GGG + chr3_2:25660306-25660325 None:intergenic 35.0%
AAGTCATTCCTATCCAGAAT+TGG + chr3_2:25660307-25660326 None:intergenic 35.0%
TGTCACAGAAAAATGTCGTT+TGG - chr3_2:25660773-25660792 Msa0400890:intron 35.0%
! TTTGGTCCCTCTAAATTTTC+GGG + chr3_2:25660847-25660866 None:intergenic 35.0%
TTAGAGGGACCAAAAATTGA+AGG - chr3_2:25660853-25660872 Msa0400890:intron 35.0%
CGTCAAACTTCCAGTTAAAT+TGG + chr3_2:25660942-25660961 None:intergenic 35.0%
ATTTAACTGGAAGTTTGACG+TGG - chr3_2:25660942-25660961 Msa0400890:intron 35.0%
TTCCTCACCAGGTAAAAAAT+AGG - chr3_2:25661157-25661176 Msa0400890:intron 35.0%
!!! TTCCTATTTTTTACCTGGTG+AGG + chr3_2:25661162-25661181 None:intergenic 35.0%
!!! CTGCATTCCTATTTTTTACC+TGG + chr3_2:25661167-25661186 None:intergenic 35.0%
TTTGAAAATGAGGACTGACA+AGG - chr3_2:25661443-25661462 Msa0400890:intron 35.0%
GTTGAAGTCCATTAATGATC+TGG - chr3_2:25661551-25661570 Msa0400890:intron 35.0%
ATTAGAGGCCAGATCATTAA+TGG + chr3_2:25661562-25661581 None:intergenic 35.0%
CGTATACTTGGTATTTCTCA+AGG + chr3_2:25661870-25661889 None:intergenic 35.0%
! GACTTAGTGTTGCTACAATA+TGG - chr3_2:25661892-25661911 Msa0400890:intron 35.0%
CGCATATACAATACTTTGGA+GGG + chr3_2:25662026-25662045 None:intergenic 35.0%
!! CCTCCAAAGTATTGTATATG+CGG - chr3_2:25662024-25662043 Msa0400890:intron 35.0%
TCTCCGCATATACAATACTT+TGG + chr3_2:25662030-25662049 None:intergenic 35.0%
GAGCACTTAGAAAATCTGAT+AGG - chr3_2:25662052-25662071 Msa0400890:intron 35.0%
! CTTTGTTCATGTCTTTTTCC+AGG + chr3_2:25662225-25662244 None:intergenic 35.0%
ATAACATGGAATGTGGAATC+TGG - chr3_2:25662295-25662314 Msa0400890:intron 35.0%
AACAAGCAGTATCAAGAAGA+TGG - chr3_2:25662418-25662437 Msa0400890:intron 35.0%
TGTGAATTGAGCGATCAAAT+TGG - chr3_2:25662578-25662597 Msa0400890:intron 35.0%
GTGAATTGAGCGATCAAATT+GGG - chr3_2:25662579-25662598 Msa0400890:intron 35.0%
AGTTAGTAAAGATGGTAGCT+AGG - chr3_2:25662746-25662765 Msa0400890:intron 35.0%
GTTAGTAAAGATGGTAGCTA+GGG - chr3_2:25662747-25662766 Msa0400890:intron 35.0%
ATGGATAGTGTCTTACTTTG+TGG - chr3_2:25662865-25662884 Msa0400890:intron 35.0%
AGTGTCTTACTTTGTGGAAA+TGG - chr3_2:25662871-25662890 Msa0400890:intron 35.0%
TTTGTGGAAATGGTTGTACA+TGG - chr3_2:25662881-25662900 Msa0400890:intron 35.0%
TTGTGGAAATGGTTGTACAT+GGG - chr3_2:25662882-25662901 Msa0400890:intron 35.0%
CTCATAAGGCGATAAACAAA+AGG - chr3_2:25663078-25663097 Msa0400890:intron 35.0%
! AACAGACCTTTTTATGTTGC+TGG + chr3_2:25663134-25663153 None:intergenic 35.0%
ATCATTGGTATAAAGGACCT+TGG - chr3_2:25663250-25663269 Msa0400890:intron 35.0%
ATTTGTGTTGAGTTATGCAC+AGG - chr3_2:25663406-25663425 Msa0400890:intron 35.0%
CATGCTGTCAAGCAAATAAA+TGG + chr3_2:25663697-25663716 None:intergenic 35.0%
CATTTATTTGCTTGACAGCA+TGG - chr3_2:25663695-25663714 Msa0400890:intron 35.0%
GATAATATACCGTGCAAGTT+TGG + chr3_2:25663858-25663877 None:intergenic 35.0%
AGTCAGCTGTTAATATCACA+AGG - chr3_2:25663993-25664012 Msa0400890:intron 35.0%
GAGTCATTTGTGAGCTAATT+TGG - chr3_2:25664192-25664211 Msa0400890:intron 35.0%
!! GCTTTTAGTTAACACTAACG+TGG + chr3_2:25664286-25664305 None:intergenic 35.0%
! TATTTTACAACCGTTCCTGA+GGG - chr3_2:25664434-25664453 Msa0400890:intron 35.0%
! TTTTGAACCCTGTACCTTTT+AGG - chr3_2:25664457-25664476 Msa0400890:intron 35.0%
! CTTTGTAACCTAAAAGGTAC+AGG + chr3_2:25664468-25664487 None:intergenic 35.0%
!! GCTTAGCTTTGTAACCTAAA+AGG + chr3_2:25664474-25664493 None:intergenic 35.0%
GTAATGTCATATGTAACCTC+AGG + chr3_2:25664503-25664522 None:intergenic 35.0%
! CTCAAGATACTCAATTTGCT+AGG + chr3_2:25664525-25664544 None:intergenic 35.0%
AAATGTTAGGGATCAAAACG+GGG + chr3_2:25664616-25664635 None:intergenic 35.0%
GAAATGTTAGGGATCAAAAC+GGG + chr3_2:25664617-25664636 None:intergenic 35.0%
GGAAATGTTAGGGATCAAAA+CGG + chr3_2:25664618-25664637 None:intergenic 35.0%
GATCCCTAACATTTCCAAAA+TGG - chr3_2:25664622-25664641 Msa0400890:intron 35.0%
!! TGGCCATTTTGGAAATGTTA+GGG + chr3_2:25664628-25664647 None:intergenic 35.0%
AAATGGGTAGACACTAAAAG+TGG + chr3_2:25664648-25664667 None:intergenic 35.0%
TGCCGCATAACCAAAAAAAT+GGG + chr3_2:25664664-25664683 None:intergenic 35.0%
CACCAACGTGTAATGTAATT+TGG - chr3_2:25664682-25664701 Msa0400890:CDS 35.0%
TAAAAAGTTAGCCGGTTAGT+AGG - chr3_2:25664790-25664809 Msa0400890:intron 35.0%
! CGGTTAGTAGGTCAATTTTA+TGG - chr3_2:25664802-25664821 Msa0400890:intron 35.0%
ATAGCTACAGACCAGTAAAA+TGG + chr3_2:25664838-25664857 None:intergenic 35.0%
TGTTAGCAAAAAGATCTCCA+CGG + chr3_2:25665054-25665073 None:intergenic 35.0%
! GGAGATCTTTTTGCTAACAT+TGG - chr3_2:25665055-25665074 Msa0400890:CDS 35.0%
!! TTAGCCTTTGCTTTTACTGT+TGG - chr3_2:25665219-25665238 Msa0400890:intron 35.0%
! TCGGTGCAAAACATTTTACA+TGG - chr3_2:25665400-25665419 Msa0400890:intron 35.0%
! TGCACTGACAATTGTAACTT+TGG + chr3_2:25665505-25665524 None:intergenic 35.0%
!! TAGTTGATAATGGTGGAACT+TGG + chr3_2:25665622-25665641 None:intergenic 35.0%
!! CGTTGAATAGTTGATAATGG+TGG + chr3_2:25665629-25665648 None:intergenic 35.0%
!! CCACGTTGAATAGTTGATAA+TGG + chr3_2:25665632-25665651 None:intergenic 35.0%
CCATTATCAACTATTCAACG+TGG - chr3_2:25665629-25665648 Msa0400890:intron 35.0%
TCAACGTGGCAATAACTTAT+TGG - chr3_2:25665643-25665662 Msa0400890:intron 35.0%
AAAAAAAGACCTTCTGTGGT+AGG + chr3_2:25665702-25665721 None:intergenic 35.0%
TAGCTTATATTGTGAGCAAG+TGG + chr3_2:25665760-25665779 None:intergenic 35.0%
AATCACTATGACATCCTCAA+TGG - chr3_2:25665827-25665846 Msa0400890:intron 35.0%
CTCAAAACATGGGTTTGAGA+AGG + chr3_2:25655527-25655546 None:intergenic 40.0%
!! CTCAAACCCATGTTTTGAGT+TGG - chr3_2:25655528-25655547 Msa0400890:three_prime_UTR 40.0%
CGTCTACCAACTCAAAACAT+GGG + chr3_2:25655537-25655556 None:intergenic 40.0%
TCGTCTACCAACTCAAAACA+TGG + chr3_2:25655538-25655557 None:intergenic 40.0%
! TTGTGTGTGTGAGTTTTACG+TGG + chr3_2:25655572-25655591 None:intergenic 40.0%
ACACACACAATCGTAAGATC+TGG - chr3_2:25655582-25655601 Msa0400890:three_prime_UTR 40.0%
CACACACAATCGTAAGATCT+GGG - chr3_2:25655583-25655602 Msa0400890:three_prime_UTR 40.0%
ACACACAATCGTAAGATCTG+GGG - chr3_2:25655584-25655603 Msa0400890:three_prime_UTR 40.0%
CAATACCGATATTGCTAGGT+TGG + chr3_2:25655631-25655650 None:intergenic 40.0%
GACAATATGAAGCACGGATA+TGG - chr3_2:25655726-25655745 Msa0400890:three_prime_UTR 40.0%
GTCAATGTACATGTTGTGTC+TGG + chr3_2:25655755-25655774 None:intergenic 40.0%
! GTAATTACATGTGTCGGTGT+TGG - chr3_2:25655819-25655838 Msa0400890:three_prime_UTR 40.0%
CATAGATACCTAAACCAAGG+AGG + chr3_2:25656118-25656137 None:intergenic 40.0%
ATTACTGTGCTGTGATCTAC+AGG - chr3_2:25656173-25656192 Msa0400890:intron 40.0%
!! ATACATGGTTTGTTGTTGCG+TGG - chr3_2:25656211-25656230 Msa0400890:intron 40.0%
TCCTATAAGCTCAAGCTTCT+AGG - chr3_2:25656502-25656521 Msa0400890:three_prime_UTR 40.0%
ACCTAGAAGCTTGAGCTTAT+AGG + chr3_2:25656506-25656525 None:intergenic 40.0%
! ACGGATTGCTTTCTAACCTT+TGG + chr3_2:25656962-25656981 None:intergenic 40.0%
ATTCGACATTTGACACTGAC+AGG + chr3_2:25657115-25657134 None:intergenic 40.0%
GTCAGTGTCAAATGTCGAAT+CGG - chr3_2:25657115-25657134 Msa0400890:intron 40.0%
TGGAAGGTTATTCCATTCCA+AGG - chr3_2:25657257-25657276 Msa0400890:intron 40.0%
GTTATTCCATTCCAAGGTCA+AGG - chr3_2:25657263-25657282 Msa0400890:intron 40.0%
TTAGACCCATGAATGCTAAG+AGG - chr3_2:25657320-25657339 Msa0400890:intron 40.0%
CTTGTCCTCTTAGCATTCAT+GGG + chr3_2:25657328-25657347 None:intergenic 40.0%
TCTTGTCCTCTTAGCATTCA+TGG + chr3_2:25657329-25657348 None:intergenic 40.0%
TGAATGCTAAGAGGACAAGA+TGG - chr3_2:25657329-25657348 Msa0400890:intron 40.0%
GAATGCTAAGAGGACAAGAT+GGG - chr3_2:25657330-25657349 Msa0400890:intron 40.0%
AATGCTAAGAGGACAAGATG+GGG - chr3_2:25657331-25657350 Msa0400890:intron 40.0%
CGAGGCAAAGATCTTAATGA+CGG + chr3_2:25657510-25657529 None:intergenic 40.0%
GACGCTTCAGAATATTAGAC+CGG + chr3_2:25657564-25657583 None:intergenic 40.0%
! TGAAGCGTCTTGTACTATGA+CGG - chr3_2:25657575-25657594 Msa0400890:intron 40.0%
!! AAGCTTGTTGTTTGTCTGTC+AGG - chr3_2:25657799-25657818 Msa0400890:intron 40.0%
!! TCAAGAAAGGCATTGCTGAA+GGG - chr3_2:25657877-25657896 Msa0400890:intron 40.0%
GGTTAACTGCACATGTAAGT+AGG + chr3_2:25658570-25658589 None:intergenic 40.0%
TGCTTTGGCAAATAGGGTAT+TGG - chr3_2:25658774-25658793 Msa0400890:intron 40.0%
! AGGTTTTTCCACGTTTTTGC+GGG - chr3_2:25658879-25658898 Msa0400890:intron 40.0%
CCATCAACTAGGACTATATG+GGG + chr3_2:25658912-25658931 None:intergenic 40.0%
! GATTTACTCCTGGGAGTTTT+TGG - chr3_2:25658999-25659018 Msa0400890:intron 40.0%
ATTGATCTCCAAAAACTCCC+AGG + chr3_2:25659010-25659029 None:intergenic 40.0%
! CAAACATCTAGAACCATGTG+CGG + chr3_2:25659077-25659096 None:intergenic 40.0%
CTGACCACAAGTAAAACTCA+AGG + chr3_2:25659258-25659277 None:intergenic 40.0%
ATCACTTTAGACTTGAAGCG+TGG - chr3_2:25659456-25659475 Msa0400890:intron 40.0%
TGACAAAGTCGCAAACAACA+AGG + chr3_2:25659737-25659756 None:intergenic 40.0%
AGATTGATCTCATGCTTCCT+TGG - chr3_2:25659793-25659812 Msa0400890:intron 40.0%
GATCATTTATGAGGAGTCGA+AGG + chr3_2:25659975-25659994 None:intergenic 40.0%
GAGAGAAGAATGGGATGTAA+GGG - chr3_2:25660104-25660123 Msa0400890:CDS 40.0%
AGAGAAGAATGGGATGTAAG+GGG - chr3_2:25660105-25660124 Msa0400890:CDS 40.0%
CATAAAGCTCACAGCTATAG+AGG + chr3_2:25660250-25660269 None:intergenic 40.0%
!!! TTCCTTTTTTTTTGACCGGC+TGG - chr3_2:25660407-25660426 Msa0400890:intron 40.0%
TTCCAGCCGGTCAAAAAAAA+AGG + chr3_2:25660412-25660431 None:intergenic 40.0%
GAGGGACTAAAACTGAAAGT+CGG + chr3_2:25660497-25660516 None:intergenic 40.0%
ATGTATATCACTTCCTCACC+AGG - chr3_2:25661146-25661165 Msa0400890:intron 40.0%
TTTCAGACCTAAGCAATTGC+AGG + chr3_2:25661253-25661272 None:intergenic 40.0%
! TTTTCTTTGGGCTAAAGGGT+TGG - chr3_2:25661391-25661410 Msa0400890:intron 40.0%
TAAAGGGTTGGACTAAGTAC+AGG - chr3_2:25661403-25661422 Msa0400890:intron 40.0%
GTTATGATTTCAACAGCCCT+TGG - chr3_2:25661655-25661674 Msa0400890:intron 40.0%
! AACAGCCCTTGGCATATTTT+GGG - chr3_2:25661666-25661685 Msa0400890:intron 40.0%
ACACTAAGTCTCCGTATACT+TGG + chr3_2:25661882-25661901 None:intergenic 40.0%
TTCACAATGTCTCTCACAGT+TGG + chr3_2:25661925-25661944 None:intergenic 40.0%
AACTGTGAGAGACATTGTGA+AGG - chr3_2:25661924-25661943 Msa0400890:CDS 40.0%
CCGCATATACAATACTTTGG+AGG + chr3_2:25662027-25662046 None:intergenic 40.0%
ATCTGGTTATGTAGCAGAGA+AGG - chr3_2:25662312-25662331 Msa0400890:intron 40.0%
GAAGATGCAATCCTTACTTC+TGG + chr3_2:25662360-25662379 None:intergenic 40.0%
CAATTATGTTGTGGAGTGTG+TGG - chr3_2:25662467-25662486 Msa0400890:intron 40.0%
AAATGGTTGTACATGGGATG+AGG - chr3_2:25662888-25662907 Msa0400890:intron 40.0%
GACCAAGGTAGAGGAATAAT+AGG - chr3_2:25662953-25662972 Msa0400890:intron 40.0%
GACCTATTATTCCTCTACCT+TGG + chr3_2:25662958-25662977 None:intergenic 40.0%
AGGTAGAGGAATAATAGGTC+AGG - chr3_2:25662958-25662977 Msa0400890:intron 40.0%
TAGAGGAATAATAGGTCAGG+AGG - chr3_2:25662961-25662980 Msa0400890:intron 40.0%
ATGCATTGCAGAGTTCAAAG+TGG - chr3_2:25663034-25663053 Msa0400890:intron 40.0%
GAGAGACCCAAAATCTCATA+AGG - chr3_2:25663064-25663083 Msa0400890:intron 40.0%
CAAAAGGATGAATTCTCTGC+AGG - chr3_2:25663094-25663113 Msa0400890:intron 40.0%
!!! GGTTTTGGAAAACCCCATAT+AGG - chr3_2:25663219-25663238 Msa0400890:intron 40.0%
! GGGAGACTTTTTACGTTGTT+TGG + chr3_2:25663283-25663302 None:intergenic 40.0%
! GATTAGGGTTGCCTTTTGTT+TGG - chr3_2:25663333-25663352 Msa0400890:intron 40.0%
! GGTATCTAGAGCCAAACAAA+AGG + chr3_2:25663347-25663366 None:intergenic 40.0%
!!! GTTTTTTCCATTCTGAGCCT+GGG - chr3_2:25663797-25663816 Msa0400890:intron 40.0%
!! GTGAACACTAGTTCTGTGAA+GGG + chr3_2:25663957-25663976 None:intergenic 40.0%
!! TGTGAACACTAGTTCTGTGA+AGG + chr3_2:25663958-25663977 None:intergenic 40.0%
CAGAACTAGTGTTCACAAGT+TGG - chr3_2:25663961-25663980 Msa0400890:CDS 40.0%
TGACATGAACTTTCACCTTG+AGG + chr3_2:25664072-25664091 None:intergenic 40.0%
ACTTAGTTGAATACCTTGCC+AGG - chr3_2:25664167-25664186 Msa0400890:intron 40.0%
CTTGTCTGACTCTTGTACAT+AGG - chr3_2:25664339-25664358 Msa0400890:intron 40.0%
! CTATTTTACAACCGTTCCTG+AGG - chr3_2:25664433-25664452 Msa0400890:intron 40.0%
GCGTTAGACCATATATTTGC+AGG + chr3_2:25664569-25664588 None:intergenic 40.0%
!! GTGGCCATTTTGGAAATGTT+AGG + chr3_2:25664629-25664648 None:intergenic 40.0%
! GACACTAAAAGTGGCCATTT+TGG + chr3_2:25664639-25664658 None:intergenic 40.0%
GTGCCGCATAACCAAAAAAA+TGG + chr3_2:25664665-25664684 None:intergenic 40.0%
TCGTCAGTATTATGGGAATC+AGG - chr3_2:25664712-25664731 Msa0400890:CDS 40.0%
CGTCAGTATTATGGGAATCA+GGG - chr3_2:25664713-25664732 Msa0400890:CDS 40.0%
! GCATGCAGATACCATTTTAC+TGG - chr3_2:25664824-25664843 Msa0400890:intron 40.0%
!! TTGATAATGGTGGAACTTGG+AGG + chr3_2:25665619-25665638 None:intergenic 40.0%
ACTATGACATCCTCAATGGT+TGG - chr3_2:25665831-25665850 Msa0400890:intron 40.0%
GATCAGTTGTACCAATGACA+AGG - chr3_2:25665941-25665960 Msa0400890:intron 40.0%
AGTTGTACCAATGACAAGGA+GGG - chr3_2:25665945-25665964 Msa0400890:intron 40.0%
!!! ATACTTTTTCTTGGCCTCTG+GGG + chr3_2:25666069-25666088 None:intergenic 40.0%
!!! CATACTTTTTCTTGGCCTCT+GGG + chr3_2:25666070-25666089 None:intergenic 40.0%
!!! AACAGGGCCATACTTTTTCT+TGG + chr3_2:25666078-25666097 None:intergenic 40.0%
!! TTGGGTTAGTGACACAAACA+GGG + chr3_2:25666094-25666113 None:intergenic 40.0%
CTGTTGAGAAAAATGTTCGG+TGG - chr3_2:25666446-25666465 Msa0400890:five_prime_UTR 40.0%
AAACGGGGTATACCTTGAAG+AGG - chr3_2:25655340-25655359 Msa0400890:three_prime_UTR 45.0%
CAGTTGTTGACAGAATCCAG+CGG + chr3_2:25655411-25655430 None:intergenic 45.0%
GCTGTCCAACCTAGCAATAT+CGG - chr3_2:25655623-25655642 Msa0400890:three_prime_UTR 45.0%
CTGGCAATACCGATATTGCT+AGG + chr3_2:25655635-25655654 None:intergenic 45.0%
TCGGTATTGCCAGTTGAGTT+AGG - chr3_2:25655642-25655661 Msa0400890:three_prime_UTR 45.0%
CGGTATTGCCAGTTGAGTTA+GGG - chr3_2:25655643-25655662 Msa0400890:three_prime_UTR 45.0%
TTGTTGCGTGGATTTCAGTG+TGG - chr3_2:25656223-25656242 Msa0400890:intron 45.0%
TTTCAGTGTGGCTCCAATGA+TGG - chr3_2:25656235-25656254 Msa0400890:intron 45.0%
TTCAGCCGATATTTGAACCC+TGG + chr3_2:25656465-25656484 None:intergenic 45.0%
CTTATGCCAGGACAGATTCT+TGG - chr3_2:25656663-25656682 Msa0400890:exon 45.0%
GATATGCCAAGAATCTGTCC+TGG + chr3_2:25656672-25656691 None:intergenic 45.0%
! ACAATAGGATGTTGGTCTGG+AGG + chr3_2:25656694-25656713 None:intergenic 45.0%
AGCACAATAGGATGTTGGTC+TGG + chr3_2:25656697-25656716 None:intergenic 45.0%
! CCTCCGATTTGAAGCACAAT+AGG + chr3_2:25656709-25656728 None:intergenic 45.0%
CCTATTGTGCTTCAAATCGG+AGG - chr3_2:25656706-25656725 Msa0400890:CDS 45.0%
!! ACCAAGCTTGCTGATGCTTA+TGG - chr3_2:25656757-25656776 Msa0400890:CDS 45.0%
ACGTCTTATGCTTGAGCCAA+AGG - chr3_2:25656943-25656962 Msa0400890:intron 45.0%
!! ACAAGGAAAGTTTGTTGCGG+AGG - chr3_2:25657057-25657076 Msa0400890:intron 45.0%
TGTCAAATGTCGAATCGGTG+TGG - chr3_2:25657120-25657139 Msa0400890:intron 45.0%
!! TGAATTTGGCTCTGAAGGGA+TGG - chr3_2:25657237-25657256 Msa0400890:intron 45.0%
TAAGCCTTAGTTGGGGTTTG+TGG + chr3_2:25657293-25657312 None:intergenic 45.0%
! TCATCATTGACTACAGGCCA+CGG - chr3_2:25657607-25657626 Msa0400890:intron 45.0%
AAATAGGGAATAAACGGCCG+TGG + chr3_2:25657627-25657646 None:intergenic 45.0%
ATTTGGGCTTGGGCGTAATA+AGG - chr3_2:25657746-25657765 Msa0400890:intron 45.0%
TCTCTTCTCTATCACCTGCT+AGG - chr3_2:25657839-25657858 Msa0400890:intron 45.0%
!! CTCAAGAAAGGCATTGCTGA+AGG - chr3_2:25657876-25657895 Msa0400890:intron 45.0%
GACTCAGTCCTGCTGAAAAT+CGG - chr3_2:25657899-25657918 Msa0400890:intron 45.0%
! GGAATACTCCGATTTTCAGC+AGG + chr3_2:25657910-25657929 None:intergenic 45.0%
ATTGGGACATACTTCAGTGG+AGG + chr3_2:25657931-25657950 None:intergenic 45.0%
GTCTACTGATGCAAGAATCC+AGG - chr3_2:25658259-25658278 Msa0400890:intron 45.0%
GGCAAGGAGAAAGTGATCAT+TGG + chr3_2:25658348-25658367 None:intergenic 45.0%
!! GGGAGTGCTTGAATGAGATT+GGG - chr3_2:25658855-25658874 Msa0400890:intron 45.0%
GTGCTTGAATGAGATTGGGT+AGG - chr3_2:25658859-25658878 Msa0400890:intron 45.0%
! GGTTTTTCCACGTTTTTGCG+GGG - chr3_2:25658880-25658899 Msa0400890:intron 45.0%
CCCCATATAGTCCTAGTTGA+TGG - chr3_2:25658909-25658928 Msa0400890:intron 45.0%
GGTTCAGGCCACAATAAAGT+TGG - chr3_2:25658944-25658963 Msa0400890:intron 45.0%
CTAATTAAGGCAACCGCACA+TGG - chr3_2:25659061-25659080 Msa0400890:intron 45.0%
CACGTGTAAGGATATCACCA+AGG + chr3_2:25659813-25659832 None:intergenic 45.0%
! CTTGGTGATATCCTTACACG+TGG - chr3_2:25659811-25659830 Msa0400890:intron 45.0%
GGAGAGAAGAATGGGATGTA+AGG - chr3_2:25660103-25660122 Msa0400890:CDS 45.0%
GAGAAGAATGGGATGTAAGG+GGG - chr3_2:25660106-25660125 Msa0400890:CDS 45.0%
CTGAGCTTATTACTTGGGCT+AGG - chr3_2:25660213-25660232 Msa0400890:intron 45.0%
! CTTATTACTTGGGCTAGGAG+AGG - chr3_2:25660218-25660237 Msa0400890:intron 45.0%
AAGCAATTGCAGGAGATCAG+TGG + chr3_2:25661243-25661262 None:intergenic 45.0%
CTGATCTCCTGCAATTGCTT+AGG - chr3_2:25661243-25661262 Msa0400890:intron 45.0%
! CAACAGCCCTTGGCATATTT+TGG - chr3_2:25661665-25661684 Msa0400890:intron 45.0%
! ACAGCCCTTGGCATATTTTG+GGG - chr3_2:25661667-25661686 Msa0400890:intron 45.0%
CGTTCCCCAAAATATGCCAA+GGG + chr3_2:25661674-25661693 None:intergenic 45.0%
ACGTTCCCCAAAATATGCCA+AGG + chr3_2:25661675-25661694 None:intergenic 45.0%
CGACGTGTAAGACCAATACT+TGG + chr3_2:25661720-25661739 None:intergenic 45.0%
!! TATTGGTCTTACACGTCGTC+AGG - chr3_2:25661722-25661741 Msa0400890:intron 45.0%
CTTGGTATTTCTCAAGGACC+TGG + chr3_2:25661864-25661883 None:intergenic 45.0%
TGGTTATGTAGCAGAGAAGG+TGG - chr3_2:25662315-25662334 Msa0400890:intron 45.0%
! CATCAAGTCTTTGGTTCCAC+AGG + chr3_2:25662706-25662725 None:intergenic 45.0%
TGGTAGCTAGGGATCATATG+TGG - chr3_2:25662758-25662777 Msa0400890:intron 45.0%
AGGGATCATATGTGGTGTAG+TGG - chr3_2:25662766-25662785 Msa0400890:intron 45.0%
CATAAGCGTTATGCCCTGAA+CGG + chr3_2:25662848-25662867 None:intergenic 45.0%
! TACATGGGATGAGGTTTGCT+AGG - chr3_2:25662897-25662916 Msa0400890:intron 45.0%
ACGTCAGAAGATGATATCGC+TGG - chr3_2:25662991-25663010 Msa0400890:intron 45.0%
TATCGCTGGTACATGTACGA+AGG - chr3_2:25663005-25663024 Msa0400890:intron 45.0%
! ACCAAAGCATCTCGAGACAA+CGG - chr3_2:25663187-25663206 Msa0400890:intron 45.0%
! CAACGGCACTTATCAGGTTT+TGG - chr3_2:25663204-25663223 Msa0400890:intron 45.0%
TGTGTTGAGTTATGCACAGG+AGG - chr3_2:25663409-25663428 Msa0400890:intron 45.0%
GGCTGCAGCAAAGTAAACAA+TGG + chr3_2:25663769-25663788 None:intergenic 45.0%
ACTTTGCTGCAGCCTTTACT+TGG - chr3_2:25663775-25663794 Msa0400890:intron 45.0%
!!! GGTTTTTTCCATTCTGAGCC+TGG - chr3_2:25663796-25663815 Msa0400890:intron 45.0%
TTCTGCTGTCCAAACTTGCA+CGG - chr3_2:25663846-25663865 Msa0400890:intron 45.0%
TACGTTTCACCTTGTCCTCA+AGG - chr3_2:25664054-25664073 Msa0400890:intron 45.0%
GAACTTTCACCTTGAGGACA+AGG + chr3_2:25664066-25664085 None:intergenic 45.0%
ACAAATGACTCATCCTGGCA+AGG + chr3_2:25664183-25664202 None:intergenic 45.0%
AGCTCACAAATGACTCATCC+TGG + chr3_2:25664188-25664207 None:intergenic 45.0%
AAAGCTAAGCTCTTAGCCTG+AGG - chr3_2:25664484-25664503 Msa0400890:intron 45.0%
! CTGGTCTGTAGCTATCCTTT+TGG - chr3_2:25664843-25664862 Msa0400890:CDS 45.0%
AGCAATTCCAGACTCAGTCT+TGG - chr3_2:25665000-25665019 Msa0400890:intron 45.0%
TCTCTTGTTCTGTATGGTGG+AGG + chr3_2:25665091-25665110 None:intergenic 45.0%
TCGTCTCTTGTTCTGTATGG+TGG + chr3_2:25665094-25665113 None:intergenic 45.0%
ACCATACAGAACAAGAGACG+AGG - chr3_2:25665093-25665112 Msa0400890:CDS 45.0%
TCCTCGTCTCTTGTTCTGTA+TGG + chr3_2:25665097-25665116 None:intergenic 45.0%
CTGTTGAGAAAAATGCTGGG+TGG - chr3_2:25665271-25665290 Msa0400890:intron 45.0%
GAGGTCAGGCTTATCTGATA+TGG + chr3_2:25665308-25665327 None:intergenic 45.0%
ATGTATGGTCCTACCACAGA+AGG - chr3_2:25665690-25665709 Msa0400890:CDS 45.0%
! AACCGATGATCGGTTGGTTA+CGG + chr3_2:25665865-25665884 None:intergenic 45.0%
AGTGCTGTAAGAGCAGTTGA+AGG - chr3_2:25665909-25665928 Msa0400890:intron 45.0%
GTGCTGTAAGAGCAGTTGAA+GGG - chr3_2:25665910-25665929 Msa0400890:intron 45.0%
TGCTGTAAGAGCAGTTGAAG+GGG - chr3_2:25665911-25665930 Msa0400890:intron 45.0%
CAGTTGTACCAATGACAAGG+AGG - chr3_2:25665944-25665963 Msa0400890:intron 45.0%
ATTGCTACCCTCCTTGTCAT+TGG + chr3_2:25665955-25665974 None:intergenic 45.0%
AATGACAAGGAGGGTAGCAA+TGG - chr3_2:25665954-25665973 Msa0400890:intron 45.0%
GCAGATGATGAACCAAGAAG+AGG - chr3_2:25666041-25666060 Msa0400890:intron 45.0%
!!! CCATACTTTTTCTTGGCCTC+TGG + chr3_2:25666071-25666090 None:intergenic 45.0%
CCAGAGGCCAAGAAAAAGTA+TGG - chr3_2:25666068-25666087 Msa0400890:intron 45.0%
!! GTTGGGTTAGTGACACAAAC+AGG + chr3_2:25666095-25666114 None:intergenic 45.0%
AGCGACAAATCCTAGCAGTT+GGG + chr3_2:25666112-25666131 None:intergenic 45.0%
TAGCGACAAATCCTAGCAGT+TGG + chr3_2:25666113-25666132 None:intergenic 45.0%
GCTAGGATTTGTCGCTATTG+AGG - chr3_2:25666116-25666135 Msa0400890:intron 45.0%
!! AAATAAAAATTTAACAAAAA+CGG + chr3_2:25655496-25655515 None:intergenic 5.0%
!! TATAAAAATCAAAATTTATT+GGG + chr3_2:25657948-25657967 None:intergenic 5.0%
!! ATTACAAATAATAAATATAT+AGG - chr3_2:25661306-25661325 Msa0400890:intron 5.0%
!!! TTTTTAAAAAAAAAATAATG+GGG - chr3_2:25664372-25664391 Msa0400890:intron 5.0%
GCATTGCAGTCTCCTCTTCA+AGG + chr3_2:25655355-25655374 None:intergenic 50.0%
GAGAGAGAGAGAGTAGCGAA+AGG + chr3_2:25655440-25655459 None:intergenic 50.0%
TGTTGGACACGCCTAATCTG+AGG - chr3_2:25655836-25655855 Msa0400890:three_prime_UTR 50.0%
!! TGAGGAGTGTCCGTGCTTAT+AGG - chr3_2:25655854-25655873 Msa0400890:three_prime_UTR 50.0%
!! GTGTGGCTCCAATGATGGAT+TGG - chr3_2:25656240-25656259 Msa0400890:intron 50.0%
GCTCTATACGGAGATGCTTG+CGG - chr3_2:25656313-25656332 Msa0400890:intron 50.0%
GCCATAAGCATCAGCAAGCT+TGG + chr3_2:25656761-25656780 None:intergenic 50.0%
!! GTCCAGCTACTCTAGGACTA+GGG + chr3_2:25656907-25656926 None:intergenic 50.0%
!! TTTGGCTCTGAAGGGATGGA+AGG - chr3_2:25657241-25657260 Msa0400890:intron 50.0%
TTTGTGGCAAGCCTTGACCT+TGG + chr3_2:25657277-25657296 None:intergenic 50.0%
CTTGCCACAAACCCCAACTA+AGG - chr3_2:25657286-25657305 Msa0400890:intron 50.0%
TGTAGGGACATGCGGCATTT+AGG - chr3_2:25657399-25657418 Msa0400890:intron 50.0%
GTAGGGACATGCGGCATTTA+GGG - chr3_2:25657400-25657419 Msa0400890:intron 50.0%
AGCGTCTTGTACTATGACGG+AGG - chr3_2:25657578-25657597 Msa0400890:intron 50.0%
!! CATTTTGGTCTGTCTACGGG+TGG - chr3_2:25658718-25658737 Msa0400890:intron 50.0%
!! GGGGAGTGCTTGAATGAGAT+TGG - chr3_2:25658854-25658873 Msa0400890:intron 50.0%
!! GCTCTAAAGATCGGTGCTCA+TGG - chr3_2:25659856-25659875 Msa0400890:intron 50.0%
!! GGTGCTCATGGTGTTATGCT+TGG - chr3_2:25659868-25659887 Msa0400890:CDS 50.0%
AGGGGGTTAGAAGAGAGAGA+AGG - chr3_2:25660123-25660142 Msa0400890:intron 50.0%
GAGAGAGAAGGAGAGTCTGA+TGG - chr3_2:25660135-25660154 Msa0400890:intron 50.0%
GAAGGAGAGTCTGATGGAGA+AGG - chr3_2:25660141-25660160 Msa0400890:intron 50.0%
AGCTCACAGCTATAGAGGAC+TGG + chr3_2:25660245-25660264 None:intergenic 50.0%
AACTCGAGAAAGACCAGTGC+AGG - chr3_2:25662675-25662694 Msa0400890:intron 50.0%
ACCAGTGCAGGAATTACCTG+TGG - chr3_2:25662687-25662706 Msa0400890:intron 50.0%
TCCACAGGTAATTCCTGCAC+TGG + chr3_2:25662691-25662710 None:intergenic 50.0%
!! TGTGGTGTAGTGGACTCAGA+AGG - chr3_2:25662776-25662795 Msa0400890:intron 50.0%
TGTGCAACACCAGCTAATCG+AGG - chr3_2:25662815-25662834 Msa0400890:intron 50.0%
CAACACCAGCTAATCGAGGA+GGG - chr3_2:25662819-25662838 Msa0400890:intron 50.0%
CGTTCAGGGCATAACGCTTA+TGG - chr3_2:25662846-25662865 Msa0400890:intron 50.0%
TCTACCTTGGTCTGTCACAG+TGG + chr3_2:25662945-25662964 None:intergenic 50.0%
ACTGTGACAGACCAAGGTAG+AGG - chr3_2:25662944-25662963 Msa0400890:intron 50.0%
TCGAGACAACGGCACTTATC+AGG - chr3_2:25663198-25663217 Msa0400890:intron 50.0%
! CGTTGTTTGGTAGTAGGCCA+AGG + chr3_2:25663270-25663289 None:intergenic 50.0%
TTCCATTCTGAGCCTGGGAA+TGG - chr3_2:25663802-25663821 Msa0400890:intron 50.0%
GGGTTCAAAACCCTCAGGAA+CGG + chr3_2:25664447-25664466 None:intergenic 50.0%
GTACAGGGTTCAAAACCCTC+AGG + chr3_2:25664452-25664471 None:intergenic 50.0%
GACGAATCCAAGACTGAGTC+TGG + chr3_2:25665010-25665029 None:intergenic 50.0%
TCGTTTGCGAAATCACCACC+TGG - chr3_2:25665028-25665047 Msa0400890:CDS 50.0%
TGGTGGAACTTGGAGGTCTT+GGG + chr3_2:25665612-25665631 None:intergenic 50.0%
! ATGGTGGAACTTGGAGGTCT+TGG + chr3_2:25665613-25665632 None:intergenic 50.0%
! ATGATCGGTTGGTTACGGCT+GGG + chr3_2:25665860-25665879 None:intergenic 50.0%
AGCCGTAACCAACCGATCAT+CGG - chr3_2:25665860-25665879 Msa0400890:intron 50.0%
ACAAGGAGGGTAGCAATGGA+AGG - chr3_2:25665958-25665977 Msa0400890:intron 50.0%
! CTGCTGTTTGCTCTGTTGCT+GGG - chr3_2:25666009-25666028 Msa0400890:intron 50.0%
! TGCTGTTTGCTCTGTTGCTG+GGG - chr3_2:25666010-25666029 Msa0400890:intron 50.0%
! GTGTCACTAACCCAACTGCT+AGG - chr3_2:25666099-25666118 Msa0400890:intron 50.0%
GCACGGACACTCCTCAGATT+AGG + chr3_2:25655850-25655869 None:intergenic 55.0%
TGCCCTAGTCCTAGAGTAGC+TGG - chr3_2:25656902-25656921 Msa0400890:intron 55.0%
!! CGTCCAGCTACTCTAGGACT+AGG + chr3_2:25656908-25656927 None:intergenic 55.0%
AGTCCTAGAGTAGCTGGACG+TGG - chr3_2:25656908-25656927 Msa0400890:intron 55.0%
CATCCACGTCCAGCTACTCT+AGG + chr3_2:25656914-25656933 None:intergenic 55.0%
GTAGCTGGACGTGGATGCTT+TGG - chr3_2:25656917-25656936 Msa0400890:intron 55.0%
GGCAAGCCTTGACCTTGGAA+TGG + chr3_2:25657272-25657291 None:intergenic 55.0%
GGGCTTGGGCGTAATAAGGT+TGG - chr3_2:25657750-25657769 Msa0400890:intron 55.0%
AGTCAGGAAAGTCGCGCAAG+AGG + chr3_2:25658040-25658059 None:intergenic 55.0%
GCAAACTCCCCGCAAAAACG+TGG + chr3_2:25658890-25658909 None:intergenic 55.0%
CTTGAAGCGTGGACACAGAC+AGG - chr3_2:25659467-25659486 Msa0400890:intron 55.0%
! TCTGATGGAGAAGGCACGTG+TGG - chr3_2:25660150-25660169 Msa0400890:intron 55.0%
! GGAGAAGGCACGTGTGGTTT+AGG - chr3_2:25660156-25660175 Msa0400890:intron 55.0%
GCAACACCAGCTAATCGAGG+AGG - chr3_2:25662818-25662837 Msa0400890:intron 55.0%
GTCACAGTGGCGAACATGGT+TGG + chr3_2:25662932-25662951 None:intergenic 55.0%
GTCTGTCACAGTGGCGAACA+TGG + chr3_2:25662936-25662955 None:intergenic 55.0%
TTCGCCACTGTGACAGACCA+AGG - chr3_2:25662938-25662957 Msa0400890:intron 55.0%
GCCGTTGTCTCGAGATGCTT+TGG + chr3_2:25663191-25663210 None:intergenic 55.0%
GTCCATTCCCAGGCTCAGAA+TGG + chr3_2:25663807-25663826 None:intergenic 55.0%
! CTGAGCCTGGGAATGGACTT+TGG - chr3_2:25663809-25663828 Msa0400890:intron 55.0%
CGCTTCCAAAGTCCATTCCC+AGG + chr3_2:25663817-25663836 None:intergenic 55.0%
AAAAGATCTCCACGGCCAGG+TGG + chr3_2:25665046-25665065 None:intergenic 55.0%
GCAAAAAGATCTCCACGGCC+AGG + chr3_2:25665049-25665068 None:intergenic 55.0%
GGTGGAACTTGGAGGTCTTG+GGG + chr3_2:25665611-25665630 None:intergenic 55.0%
GGCTGGGAAACCAACCATTG+AGG + chr3_2:25665844-25665863 None:intergenic 55.0%
! GATGATCGGTTGGTTACGGC+TGG + chr3_2:25665861-25665880 None:intergenic 55.0%
CGTTGCAACCGATGATCGGT+TGG + chr3_2:25665871-25665890 None:intergenic 55.0%
GCTGCGTTGCAACCGATGAT+CGG + chr3_2:25665875-25665894 None:intergenic 55.0%
! GATCATCGGTTGCAACGCAG+CGG - chr3_2:25665874-25665893 Msa0400890:intron 55.0%
! GCTGCTGTTTGCTCTGTTGC+TGG - chr3_2:25666008-25666027 Msa0400890:intron 55.0%
CTCTGTTGCTGGGGTTGCAA+TGG - chr3_2:25666019-25666038 Msa0400890:intron 55.0%
! GCGGTGAGCTCGTCTTTTCC+TGG - chr3_2:25662204-25662223 Msa0400890:intron 60.0%
! GTGGACTCAGAAGGAGCACG+CGG - chr3_2:25662785-25662804 Msa0400890:intron 60.0%
GGTCACCCTCCTCGATTAGC+TGG + chr3_2:25662827-25662846 None:intergenic 60.0%
ATCGAGGAGGGTGACCGTTC+AGG - chr3_2:25662831-25662850 Msa0400890:intron 60.0%
TCGAGGAGGGTGACCGTTCA+GGG - chr3_2:25662832-25662851 Msa0400890:intron 60.0%
GGAACTTGGAGGTCTTGGGG+AGG + chr3_2:25665608-25665627 None:intergenic 60.0%
!! ACCAAGAAGAGGCACCCCAG+AGG - chr3_2:25666052-25666071 Msa0400890:intron 60.0%
! CTCAGAAGGAGCACGCGGAG+TGG - chr3_2:25662790-25662809 Msa0400890:intron 65.0%
GCGAAATCACCACCTGGCCG+TGG - chr3_2:25665034-25665053 Msa0400890:CDS 65.0%
!! GCCTCTGGGGTGCCTCTTCT+TGG + chr3_2:25666056-25666075 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 25655335 25666470 25655335 ID=Msa0400890;Name=Msa0400890
chr3_2 mRNA 25655335 25666470 25655335 ID=Msa0400890-mRNA-1;Parent=Msa0400890;Name=Msa0400890-mRNA-1;_AED=0.11;_eAED=0.11;_QI=190|1|1|1|0.84|0.71|14|1019|372
chr3_2 exon 25655335 25656166 25655335 ID=Msa0400890-mRNA-1:exon:5349;Parent=Msa0400890-mRNA-1
chr3_2 exon 25656492 25656837 25656492 ID=Msa0400890-mRNA-1:exon:5348;Parent=Msa0400890-mRNA-1
chr3_2 exon 25657938 25658018 25657938 ID=Msa0400890-mRNA-1:exon:5347;Parent=Msa0400890-mRNA-1
chr3_2 exon 25659860 25659940 25659860 ID=Msa0400890-mRNA-1:exon:5346;Parent=Msa0400890-mRNA-1
chr3_2 exon 25660062 25660134 25660062 ID=Msa0400890-mRNA-1:exon:5345;Parent=Msa0400890-mRNA-1
chr3_2 exon 25661897 25661958 25661897 ID=Msa0400890-mRNA-1:exon:5344;Parent=Msa0400890-mRNA-1
chr3_2 exon 25663705 25663786 25663705 ID=Msa0400890-mRNA-1:exon:5343;Parent=Msa0400890-mRNA-1
chr3_2 exon 25663867 25663984 25663867 ID=Msa0400890-mRNA-1:exon:5342;Parent=Msa0400890-mRNA-1
chr3_2 exon 25664636 25664738 25664636 ID=Msa0400890-mRNA-1:exon:5341;Parent=Msa0400890-mRNA-1
chr3_2 exon 25664841 25664910 25664841 ID=Msa0400890-mRNA-1:exon:5340;Parent=Msa0400890-mRNA-1
chr3_2 exon 25665005 25665132 25665005 ID=Msa0400890-mRNA-1:exon:5339;Parent=Msa0400890-mRNA-1
chr3_2 exon 25665438 25665564 25665438 ID=Msa0400890-mRNA-1:exon:5338;Parent=Msa0400890-mRNA-1
chr3_2 exon 25665677 25665806 25665677 ID=Msa0400890-mRNA-1:exon:5337;Parent=Msa0400890-mRNA-1
chr3_2 exon 25666376 25666470 25666376 ID=Msa0400890-mRNA-1:exon:5336;Parent=Msa0400890-mRNA-1
chr3_2 five_prime_UTR 25666376 25666470 25666376 ID=Msa0400890-mRNA-1:five_prime_utr;Parent=Msa0400890-mRNA-1
chr3_2 five_prime_UTR 25665712 25665806 25665712 ID=Msa0400890-mRNA-1:five_prime_utr;Parent=Msa0400890-mRNA-1
chr3_2 CDS 25665677 25665711 25665677 ID=Msa0400890-mRNA-1:cds;Parent=Msa0400890-mRNA-1
chr3_2 CDS 25665438 25665564 25665438 ID=Msa0400890-mRNA-1:cds;Parent=Msa0400890-mRNA-1
chr3_2 CDS 25665005 25665132 25665005 ID=Msa0400890-mRNA-1:cds;Parent=Msa0400890-mRNA-1
chr3_2 CDS 25664841 25664910 25664841 ID=Msa0400890-mRNA-1:cds;Parent=Msa0400890-mRNA-1
chr3_2 CDS 25664636 25664738 25664636 ID=Msa0400890-mRNA-1:cds;Parent=Msa0400890-mRNA-1
chr3_2 CDS 25663867 25663984 25663867 ID=Msa0400890-mRNA-1:cds;Parent=Msa0400890-mRNA-1
chr3_2 CDS 25663705 25663786 25663705 ID=Msa0400890-mRNA-1:cds;Parent=Msa0400890-mRNA-1
chr3_2 CDS 25661897 25661958 25661897 ID=Msa0400890-mRNA-1:cds;Parent=Msa0400890-mRNA-1
chr3_2 CDS 25660062 25660134 25660062 ID=Msa0400890-mRNA-1:cds;Parent=Msa0400890-mRNA-1
chr3_2 CDS 25659860 25659940 25659860 ID=Msa0400890-mRNA-1:cds;Parent=Msa0400890-mRNA-1
chr3_2 CDS 25657938 25658018 25657938 ID=Msa0400890-mRNA-1:cds;Parent=Msa0400890-mRNA-1
chr3_2 CDS 25656679 25656837 25656679 ID=Msa0400890-mRNA-1:cds;Parent=Msa0400890-mRNA-1
chr3_2 three_prime_UTR 25656492 25656678 25656492 ID=Msa0400890-mRNA-1:three_prime_utr;Parent=Msa0400890-mRNA-1
chr3_2 three_prime_UTR 25655335 25656166 25655335 ID=Msa0400890-mRNA-1:three_prime_utr;Parent=Msa0400890-mRNA-1
Gene Sequence

>Msa0400890

ATGGTTGAAGATGATTATCTTCCTCCTTGGTTTAGTGTGGCTCCAATGATGGATTGGACAGATAATCATTATAGAACTCTTGCACGTCTCATATCAAAACATGCTTGGCTCTATACGGAGATGCTTGCGGCTGAAACAATTGTTTATCAAAAGGGTAATCTGGACAGATTCTTGGCATATCCTCCAGACCAACATCCTATTGTGCTTCAAATCGGAGGCAGTAATTTAGAGAATTTGGCGAAAGCAACCAAGCTTGCTGATGCTTATGGCTATGATGAGATCAACTTCAATTGTGGTTGCCCTAGTCCTAGAGTAGCTGGACGTGGATGCTTTGGTGCACGTCTTATGCTTGAGCCAAAGTTTGTTGCGGAGGCTGTTTCAGTGATTGCTGCCAATACAAATGTACCTGTCAGTGTCAAATGTCGAATCGGTGTGGATGATCATGATTCATACAATGAACTATGTGATTTCATTTACAAGGTCTCTTCTCTATCACCTGCTAGGCATTTCATAATTCACTCAAGAAAGGCATTGCTGAAGGGACTCAGTCCTGCTGAAAATCGGAGTATTCCTCCACTGAAATATGAATACTTTTATGGCCTCTTGCGCGACTTTCCTGACTTAACATTTACAATCAATGGTGGTATTACTTGTATTGATGAGATCAATGCAGCTCTAAAGATCGGTGCTCATGGTGTTATGCTTGGACGTGCTGCCTACCATAACCCTTGGCATATTTTGGGGAACGTTGATAGTGCAATTTATGGTGTACCAAGTATTGGTCTTACACGTCGTCAGGTCCTTGAGAAATACCAAGTATACGGAGACTTAGTGTTGCTACAATATGGATTTCGGCCAACTGTGAGAGACATTGTGAAGCCTTTACTTGGTTTTTTCCATTCTGAGCCTGGGAATGGACTTTGGAAGCGAAAAGCAGATTCTGCTGTCCAAACTTGCACGACAGTAAAATCATTTCTTGAAGAAACTCTTGTAGCAATTCCAGACTCAGTCTTGGATTCGTCGTTTGCGAAATCACCACCTGGCCGTGGAGATCTTTTTGCTAACATTGGCAGTTTATTGCCTCCACCATACAGAACAAGAGACGAGGATGATGTGTAA

Protein sequence

>Msa0400890

MVEDDYLPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEMLAAETIVYQKGNLDRFLAYPPDQHPIVLQIGGSNLENLAKATKLADAYGYDEINFNCGCPSPRVAGRGCFGARLMLEPKFVAEAVSVIAANTNVPVSVKCRIGVDDHDSYNELCDFIYKVSSLSPARHFIIHSRKALLKGLSPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITCIDEINAALKIGAHGVMLGRAAYHNPWHILGNVDSAIYGVPSIGLTRRQVLEKYQVYGDLVLLQYGFRPTVRDIVKPLLGFFHSEPGNGLWKRKADSAVQTCTTVKSFLEETLVAIPDSVLDSSFAKSPPGRGDLFANIGSLLPPPYRTRDEDDV*