AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1419760


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1419760 MtrunA17_Chr7g0266141 95.627 343 15 0 1 343 1 343 0.0 662
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1419760 AT4G34090.1 67.359 337 100 3 6 342 2 328 4.39e-161 454
Msa1419760 AT4G34090.3 70.874 309 80 2 40 342 84 388 2.78e-156 444
Msa1419760 AT2G23370.1 64.262 305 109 0 39 343 35 339 1.22e-149 425
Msa1419760 AT2G23370.2 64.912 285 100 0 59 343 3 287 1.22e-140 400
Msa1419760 AT4G34090.2 65.198 227 69 3 6 232 2 218 1.14e-97 289

Find 96 sgRNAs with CRISPR-Local

Find 522 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCATCTTCATTTCTCTATT+TGG 0.116009 tig0024727:+15001 None:intergenic
TGGCTTCTATAGAGGGAAAT+TGG 0.185446 tig0024727:-11852 Msa1419760:CDS
GGGAAATTGGGACGACTATT+TGG 0.234012 tig0024727:-11839 Msa1419760:CDS
AGCAGCTTTCTTGTTAGATT+TGG 0.286721 tig0024727:-11872 Msa1419760:CDS
TCTTCTTCCTCCTCCATTCC+TGG 0.292764 tig0024727:-14896 Msa1419760:intron
CCAATATATTCACAGGATAT+TGG 0.310098 tig0024727:-12926 Msa1419760:CDS
GGACTCTAGGCTGCATGTAT+AGG 0.313082 tig0024727:-12262 Msa1419760:CDS
AAGGTTTCAGCTTTAGTAAC+AGG 0.313153 tig0024727:-12534 Msa1419760:CDS
AAGACATTGAAGTCTATAAA+TGG 0.326602 tig0024727:+11726 None:intergenic
AGACAGCTATCTTCTGAAAA+AGG 0.333484 tig0024727:-12785 Msa1419760:intron
GCCTCACTGGGGTGGAGCTG+TGG 0.360293 tig0024727:+13255 None:intergenic
TGAGCAAATTGAGTATATTA+AGG 0.374474 tig0024727:-12097 Msa1419760:CDS
TCCTCCTTCCTCGTAACATT+TGG 0.375522 tig0024727:+11807 None:intergenic
CCTCACTGGGGTGGAGCTGT+GGG 0.379354 tig0024727:+13256 None:intergenic
CCAATATCCTGTGAATATAT+TGG 0.383284 tig0024727:+12926 None:intergenic
GACTCTAGGCTGCATGTATA+GGG 0.385429 tig0024727:-12261 Msa1419760:intron
AAATCAATTGCAGGTTGTAC+TGG 0.386654 tig0024727:-11899 Msa1419760:intron
GTTAGATTTGGCTTCTATAG+AGG 0.387542 tig0024727:-11860 Msa1419760:CDS
TTTCCAGTACTTCATAGTAT+TGG 0.387921 tig0024727:-11691 Msa1419760:three_prime_UTR
AAGGAGAAGGTGACTGAAGA+GGG 0.391447 tig0024727:-12078 Msa1419760:CDS
AAGTACTGGAAACGCTGAAC+AGG 0.394123 tig0024727:+11702 None:intergenic
GGCTTCTATAGAGGGAAATT+GGG 0.412214 tig0024727:-11851 Msa1419760:CDS
ATCGTACATAAATATGTTGT+TGG 0.413508 tig0024727:+11308 None:intergenic
CAATTTGCTCATCGTCCCAT+TGG 0.429642 tig0024727:+12109 None:intergenic
ACAAAAGGTCGTGCAAATCC+TGG 0.436836 tig0024727:+12483 None:intergenic
ACCTTTATGCAGTTACTTGG+TGG 0.441872 tig0024727:-11455 Msa1419760:three_prime_UTR
AGGGGAAACAATTATTTCTC+CGG 0.445987 tig0024727:-13699 Msa1419760:CDS
GGTACCTTTATGCAGTTACT+TGG 0.459762 tig0024727:-11458 Msa1419760:three_prime_UTR
AGGTACCTTTCGGTACTTGC+TGG 0.460392 tig0024727:+11474 None:intergenic
TTTCATGCTTCAACTGATGC+TGG 0.462436 tig0024727:-12859 Msa1419760:CDS
GCCACCAAGTAACTGCATAA+AGG 0.466107 tig0024727:+11454 None:intergenic
TATCAATAATTGATGGTGAA+TGG 0.478927 tig0024727:+11542 None:intergenic
TATCCAATACTATGAAGTAC+TGG 0.481158 tig0024727:+11688 None:intergenic
ACTTTGCGCTCTAAGACATC+AGG 0.482467 tig0024727:+12679 None:intergenic
CTGTAACTGCACTGCTGCGA+TGG 0.484073 tig0024727:-13279 Msa1419760:CDS
ACCTCAGCGTTGAACACAAA+AGG 0.485844 tig0024727:+12468 None:intergenic
ATTATTCTTCCATGTAAAGC+AGG 0.487855 tig0024727:+11608 None:intergenic
AGAAGCTAAAGATGCTGCCA+GGG 0.492594 tig0024727:-12306 Msa1419760:CDS
AATTTGCTCATCGTCCCATT+GGG 0.494151 tig0024727:+12110 None:intergenic
CGTTGCTGATATAGCCCAAT+GGG 0.496289 tig0024727:-12124 Msa1419760:CDS
AGAAATGGTGTTACCAGGAA+TGG 0.498018 tig0024727:+14883 None:intergenic
GAAATCTTAGTAAATCACTT+AGG 0.500124 tig0024727:-11365 Msa1419760:three_prime_UTR
AACTGCATAAAGGTACCTTT+CGG 0.500538 tig0024727:+11464 None:intergenic
AAATCACCATGGTGGACTCT+AGG 0.500907 tig0024727:-12275 Msa1419760:CDS
TTAGATTTGGCTTCTATAGA+GGG 0.501856 tig0024727:-11859 Msa1419760:CDS
GTCAAATCAATAGTTATAAG+TGG 0.504849 tig0024727:-11244 Msa1419760:three_prime_UTR
TAGAAGCTAAAGATGCTGCC+AGG 0.505697 tig0024727:-12307 Msa1419760:CDS
AAAAGGGAAGGCGCCTGCGC+AGG 0.507009 tig0024727:-12037 Msa1419760:intron
TAGTCAAGAGGGTTGAAAGA+TGG 0.509096 tig0024727:+14742 None:intergenic
TAAGGAGAAGGTGACTGAAG+AGG 0.516226 tig0024727:-12079 Msa1419760:CDS
CAGATTGGAAATGCCGGTGG+TGG 0.521646 tig0024727:-13161 Msa1419760:CDS
ATTAATCCTTGCTTGGCACC+CGG 0.525919 tig0024727:+13680 None:intergenic
TACATTGACATGCGAACTCA+AGG 0.536004 tig0024727:+11660 None:intergenic
CACCTACAGATTGGAAATGC+CGG 0.538643 tig0024727:-13167 Msa1419760:intron
GGGGAAACAATTATTTCTCC+GGG 0.541977 tig0024727:-13698 Msa1419760:CDS
AATTGAGTATATTAAGGAGA+AGG 0.542921 tig0024727:-12091 Msa1419760:CDS
AAGAGGGTTGAAAGATGGTG+AGG 0.544733 tig0024727:+14747 None:intergenic
ATTTCTCCGGGTGCCAAGCA+AGG 0.547235 tig0024727:-13686 Msa1419760:CDS
AACGGCAATGAATCAAAGAA+AGG 0.559160 tig0024727:-11417 Msa1419760:three_prime_UTR
TTAGTAAATCACTTAGGAGA+AGG 0.562512 tig0024727:-11359 Msa1419760:three_prime_UTR
AGGGTTGAAAGATGGTGAGG+AGG 0.590079 tig0024727:+14750 None:intergenic
AGGTAGACCAATATATTCAC+AGG 0.591460 tig0024727:-12933 Msa1419760:CDS
AACATGGAGCCTCACTGGGG+TGG 0.597811 tig0024727:+13247 None:intergenic
AGGTTTCAGCTTTAGTAACA+GGG 0.604876 tig0024727:-12533 Msa1419760:CDS
ATTGGTTGAAGAAGATGCGA+AGG 0.607770 tig0024727:-12908 Msa1419760:CDS
AGAAGGTGACTGAAGAGGGA+AGG 0.608295 tig0024727:-12074 Msa1419760:CDS
ATTGGGACGACTATTTGGAA+CGG 0.616116 tig0024727:-11834 Msa1419760:CDS
TTGACTATCTTGAAAACTAG+AGG 0.618629 tig0024727:-14726 Msa1419760:intron
ATTGCCAAATGTTACGAGGA+AGG 0.623355 tig0024727:-11811 Msa1419760:CDS
TCTTAGAGCGCAAAGTGAAG+CGG 0.625267 tig0024727:-12672 Msa1419760:CDS
GGTGTTACCAGGAATGGAGG+AGG 0.625388 tig0024727:+14889 None:intergenic
CCCCTGTCAAAAGACAGCTC+CGG 0.627014 tig0024727:-13644 Msa1419760:intron
AATGGTGTTACCAGGAATGG+AGG 0.636788 tig0024727:+14886 None:intergenic
GGTTTCAGCTTTAGTAACAG+GGG 0.642654 tig0024727:-12532 Msa1419760:CDS
TGACACTACGAAACCTGCGC+AGG 0.643828 tig0024727:+12024 None:intergenic
TAAGTTAGAAATCCCAGACT+CGG 0.644615 tig0024727:+12807 None:intergenic
AGTACTGGAAACGCTGAACA+GGG 0.645412 tig0024727:+11703 None:intergenic
ACGTTGCTGATATAGCCCAA+TGG 0.648695 tig0024727:-12125 Msa1419760:CDS
GTTGTTGAGAAACAGAGGCA+TGG 0.648886 tig0024727:+14940 None:intergenic
TTTGACAGGGGAATAGCAAG+GGG 0.657707 tig0024727:+13656 None:intergenic
TCAACGCTGAGGTTATGTTG+AGG 0.659728 tig0024727:-12458 Msa1419760:intron
GAAGCTAAAGATGCTGCCAG+GGG 0.662512 tig0024727:-12305 Msa1419760:CDS
AGATGCGAAGAGAAGCTGCA+CGG 0.667174 tig0024727:+14918 None:intergenic
AGCGGCGGAGTATTGTGTGG+CGG 0.668866 tig0024727:-14980 Msa1419760:CDS
GTGTACCAGCAAGTACCGAA+AGG 0.675793 tig0024727:-11479 Msa1419760:three_prime_UTR
AATAGAGAAATGAAGATGAG+CGG 0.680983 tig0024727:-14998 Msa1419760:exon
TTGACAGGGGAATAGCAAGG+GGG 0.685425 tig0024727:+13657 None:intergenic
GCCAAATGTTACGAGGAAGG+AGG 0.686388 tig0024727:-11808 Msa1419760:CDS
GCACGGTTGTTGAGAAACAG+AGG 0.688148 tig0024727:+14935 None:intergenic
ATGAGCGGCGGAGTATTGTG+TGG 0.689004 tig0024727:-14983 Msa1419760:CDS
AGAGAAATGAAGATGAGCGG+CGG 0.698385 tig0024727:-14995 Msa1419760:exon
CTACAGATTGGAAATGCCGG+TGG 0.705630 tig0024727:-13164 Msa1419760:intron
GAGCTTTAAAATCACCATGG+TGG 0.706502 tig0024727:-12283 Msa1419760:CDS
GGGGAGCTTTAAAATCACCA+TGG 0.727300 tig0024727:-12286 Msa1419760:CDS
ACGGATTGCCAAATGTTACG+AGG 0.736072 tig0024727:-11815 Msa1419760:CDS
ATGCAGCCTAGAGTCCACCA+TGG 0.758990 tig0024727:+12269 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATATATGACTTTGATTATTT+TGG - tig0024727:11673-11692 Msa1419760:three_prime_UTR 15.0%
!!! TTTAAGAATTTTATAATGTG+TGG + tig0024727:11749-11768 None:intergenic 15.0%
!! AAAAACATATCAATAATTGA+TGG + tig0024727:14736-14755 None:intergenic 15.0%
!!! ATATATGACTTTGATTATTT+TGG - tig0024727:11673-11692 Msa1419760:three_prime_UTR 15.0%
!!! TTTAAGAATTTTATAATGTG+TGG + tig0024727:11749-11768 None:intergenic 15.0%
!! AAAAACATATCAATAATTGA+TGG + tig0024727:14736-14755 None:intergenic 15.0%
!! ATCTATGATATTATTCAGTT+AGG - tig0024727:11795-11814 Msa1419760:CDS 20.0%
!! AAAAAATGAAAAGAACATCA+TGG + tig0024727:11933-11952 None:intergenic 20.0%
!! ATTATCTTTGTGTAAAGATA+TGG - tig0024727:12328-12347 Msa1419760:intron 20.0%
!!! TCTAGAGTTTGATATTAATT+AGG - tig0024727:12511-12530 Msa1419760:CDS 20.0%
!!! AGTTAATAGCTTTTAGATAT+AGG - tig0024727:12659-12678 Msa1419760:CDS 20.0%
!!! GTTAATAGCTTTTAGATATA+GGG - tig0024727:12660-12679 Msa1419760:CDS 20.0%
!! AATAAATTAACCACGAAAAA+GGG + tig0024727:13050-13069 None:intergenic 20.0%
!! AATACACGTTTACAAATTTA+TGG + tig0024727:13512-13531 None:intergenic 20.0%
!!! CCCTATATAATTGATTTTTT+CGG + tig0024727:13929-13948 None:intergenic 20.0%
!! CCGAAAAAATCAATTATATA+GGG - tig0024727:13926-13945 Msa1419760:intron 20.0%
!! AAAAATCAATTATATAGGGT+TGG - tig0024727:13930-13949 Msa1419760:intron 20.0%
!! AAAATCAATTATATAGGGTT+GGG - tig0024727:13931-13950 Msa1419760:intron 20.0%
!! TCGATTACATTTGAATATAA+TGG - tig0024727:14275-14294 Msa1419760:intron 20.0%
!! ATCTATGATATTATTCAGTT+AGG - tig0024727:11795-11814 Msa1419760:CDS 20.0%
!! AAAAAATGAAAAGAACATCA+TGG + tig0024727:11933-11952 None:intergenic 20.0%
!! ATTATCTTTGTGTAAAGATA+TGG - tig0024727:12328-12347 Msa1419760:intron 20.0%
!!! TCTAGAGTTTGATATTAATT+AGG - tig0024727:12511-12530 Msa1419760:CDS 20.0%
!!! AGTTAATAGCTTTTAGATAT+AGG - tig0024727:12659-12678 Msa1419760:CDS 20.0%
!!! GTTAATAGCTTTTAGATATA+GGG - tig0024727:12660-12679 Msa1419760:CDS 20.0%
!! AATAAATTAACCACGAAAAA+GGG + tig0024727:13050-13069 None:intergenic 20.0%
!! AATACACGTTTACAAATTTA+TGG + tig0024727:13512-13531 None:intergenic 20.0%
!!! CCCTATATAATTGATTTTTT+CGG + tig0024727:13929-13948 None:intergenic 20.0%
!! CCGAAAAAATCAATTATATA+GGG - tig0024727:13926-13945 Msa1419760:intron 20.0%
!! AAAAATCAATTATATAGGGT+TGG - tig0024727:13930-13949 Msa1419760:intron 20.0%
!! AAAATCAATTATATAGGGTT+GGG - tig0024727:13931-13950 Msa1419760:intron 20.0%
!! TCGATTACATTTGAATATAA+TGG - tig0024727:14275-14294 Msa1419760:intron 20.0%
! GGAAAAGAAAAAAGGTAAAA+TGG + tig0024727:11578-11597 None:intergenic 25.0%
! CTGAATTTGGAAAAGAAAAA+AGG + tig0024727:11586-11605 None:intergenic 25.0%
!!! TTCCAAATTCAGCTTTTTTT+TGG - tig0024727:11594-11613 Msa1419760:three_prime_UTR 25.0%
! AACCAAAAAAAAGCTGAATT+TGG + tig0024727:11599-11618 None:intergenic 25.0%
! ATACAATTTCAATGACAACT+TGG + tig0024727:11709-11728 None:intergenic 25.0%
! GATACAATCATACAATTTCA+AGG - tig0024727:12380-12399 Msa1419760:intron 25.0%
!! TCTTATGATTTGTGTATAAC+AGG - tig0024727:12549-12568 Msa1419760:intron 25.0%
!! CTTATGATTTGTGTATAACA+GGG - tig0024727:12550-12569 Msa1419760:intron 25.0%
!! TTATGATTTGTGTATAACAG+GGG - tig0024727:12551-12570 Msa1419760:intron 25.0%
! ATTAACTCTTAAATCCTTAC+CGG + tig0024727:12646-12665 None:intergenic 25.0%
!!! TTTAGATATAGGGTTTTGTT+TGG - tig0024727:12670-12689 Msa1419760:CDS 25.0%
! ACTTATTTCAGTTTCTTTGT+TGG + tig0024727:12893-12912 None:intergenic 25.0%
! CAATAAATTAACCACGAAAA+AGG + tig0024727:13051-13070 None:intergenic 25.0%
! AATATACACACATAGACTAA+TGG - tig0024727:13212-13231 Msa1419760:intron 25.0%
! TACTATGTGATTGAAGAATA+TGG - tig0024727:13263-13282 Msa1419760:CDS 25.0%
!!! TGGAGAAAAGTTTTATAGAA+AGG - tig0024727:13429-13448 Msa1419760:intron 25.0%
!!! GGAGAAAAGTTTTATAGAAA+GGG - tig0024727:13430-13449 Msa1419760:intron 25.0%
!!! CAAGAACCTAATCTATTTTT+AGG - tig0024727:13555-13574 Msa1419760:intron 25.0%
!!! AACCTAATCTATTTTTAGGT+TGG - tig0024727:13559-13578 Msa1419760:intron 25.0%
! TACCAACCTAAAAATAGATT+AGG + tig0024727:13564-13583 None:intergenic 25.0%
! ATGAGTCAATTGATACATAT+TGG - tig0024727:13695-13714 Msa1419760:CDS 25.0%
! GCCGAAAAAATCAATTATAT+AGG - tig0024727:13925-13944 Msa1419760:intron 25.0%
!! CCAAAAAGTATGAAATAGAT+GGG + tig0024727:14092-14111 None:intergenic 25.0%
!!! CCATCTATTTCATACTTTTT+GGG - tig0024727:14090-14109 Msa1419760:intron 25.0%
! TGAGCAAATTGAGTATATTA+AGG - tig0024727:14171-14190 Msa1419760:intron 25.0%
! AATTGAGTATATTAAGGAGA+AGG - tig0024727:14177-14196 Msa1419760:intron 25.0%
! AGATTAACATAAATATCAGC+AGG + tig0024727:14332-14351 None:intergenic 25.0%
! AAGACATTGAAGTCTATAAA+TGG + tig0024727:14545-14564 None:intergenic 25.0%
!!! TATCAATAATTGATGGTGAA+TGG + tig0024727:14729-14748 None:intergenic 25.0%
! GAAATCTTAGTAAATCACTT+AGG - tig0024727:14903-14922 Msa1419760:CDS 25.0%
! ATCGTACATAAATATGTTGT+TGG + tig0024727:14963-14982 None:intergenic 25.0%
! GTCAAATCAATAGTTATAAG+TGG - tig0024727:15024-15043 Msa1419760:five_prime_UTR 25.0%
! GGAAAAGAAAAAAGGTAAAA+TGG + tig0024727:11578-11597 None:intergenic 25.0%
! CTGAATTTGGAAAAGAAAAA+AGG + tig0024727:11586-11605 None:intergenic 25.0%
!!! TTCCAAATTCAGCTTTTTTT+TGG - tig0024727:11594-11613 Msa1419760:three_prime_UTR 25.0%
! AACCAAAAAAAAGCTGAATT+TGG + tig0024727:11599-11618 None:intergenic 25.0%
! ATACAATTTCAATGACAACT+TGG + tig0024727:11709-11728 None:intergenic 25.0%
! GATACAATCATACAATTTCA+AGG - tig0024727:12380-12399 Msa1419760:intron 25.0%
!! TCTTATGATTTGTGTATAAC+AGG - tig0024727:12549-12568 Msa1419760:intron 25.0%
!! CTTATGATTTGTGTATAACA+GGG - tig0024727:12550-12569 Msa1419760:intron 25.0%
!! TTATGATTTGTGTATAACAG+GGG - tig0024727:12551-12570 Msa1419760:intron 25.0%
! ATTAACTCTTAAATCCTTAC+CGG + tig0024727:12646-12665 None:intergenic 25.0%
!!! TTTAGATATAGGGTTTTGTT+TGG - tig0024727:12670-12689 Msa1419760:CDS 25.0%
! ACTTATTTCAGTTTCTTTGT+TGG + tig0024727:12893-12912 None:intergenic 25.0%
! CAATAAATTAACCACGAAAA+AGG + tig0024727:13051-13070 None:intergenic 25.0%
! AATATACACACATAGACTAA+TGG - tig0024727:13212-13231 Msa1419760:intron 25.0%
! TACTATGTGATTGAAGAATA+TGG - tig0024727:13263-13282 Msa1419760:CDS 25.0%
!!! TGGAGAAAAGTTTTATAGAA+AGG - tig0024727:13429-13448 Msa1419760:intron 25.0%
!!! GGAGAAAAGTTTTATAGAAA+GGG - tig0024727:13430-13449 Msa1419760:intron 25.0%
!!! CAAGAACCTAATCTATTTTT+AGG - tig0024727:13555-13574 Msa1419760:intron 25.0%
!!! AACCTAATCTATTTTTAGGT+TGG - tig0024727:13559-13578 Msa1419760:intron 25.0%
! TACCAACCTAAAAATAGATT+AGG + tig0024727:13564-13583 None:intergenic 25.0%
! ATGAGTCAATTGATACATAT+TGG - tig0024727:13695-13714 Msa1419760:CDS 25.0%
! GCCGAAAAAATCAATTATAT+AGG - tig0024727:13925-13944 Msa1419760:intron 25.0%
!! CCAAAAAGTATGAAATAGAT+GGG + tig0024727:14092-14111 None:intergenic 25.0%
!!! CCATCTATTTCATACTTTTT+GGG - tig0024727:14090-14109 Msa1419760:intron 25.0%
! TGAGCAAATTGAGTATATTA+AGG - tig0024727:14171-14190 Msa1419760:intron 25.0%
! AATTGAGTATATTAAGGAGA+AGG - tig0024727:14177-14196 Msa1419760:intron 25.0%
! AGATTAACATAAATATCAGC+AGG + tig0024727:14332-14351 None:intergenic 25.0%
! AAGACATTGAAGTCTATAAA+TGG + tig0024727:14545-14564 None:intergenic 25.0%
!!! TATCAATAATTGATGGTGAA+TGG + tig0024727:14729-14748 None:intergenic 25.0%
! GAAATCTTAGTAAATCACTT+AGG - tig0024727:14903-14922 Msa1419760:CDS 25.0%
! ATCGTACATAAATATGTTGT+TGG + tig0024727:14963-14982 None:intergenic 25.0%
! GTCAAATCAATAGTTATAAG+TGG - tig0024727:15024-15043 Msa1419760:five_prime_UTR 25.0%
CTCATCTTCATTTCTCTATT+TGG + tig0024727:11270-11289 None:intergenic 30.0%
AATAGAGAAATGAAGATGAG+CGG - tig0024727:11270-11289 Msa1419760:three_prime_UTR 30.0%
ATAGGTTAGAATAAGATGAG+AGG + tig0024727:11411-11430 None:intergenic 30.0%
GCAACAATTGAAAAAGGAAT+AGG + tig0024727:11429-11448 None:intergenic 30.0%
ATGAAGGCAACAATTGAAAA+AGG + tig0024727:11435-11454 None:intergenic 30.0%
!! AGTTTTCAAGATAGTCAAGA+GGG + tig0024727:11540-11559 None:intergenic 30.0%
!! TAGTTTTCAAGATAGTCAAG+AGG + tig0024727:11541-11560 None:intergenic 30.0%
TTGACTATCTTGAAAACTAG+AGG - tig0024727:11542-11561 Msa1419760:three_prime_UTR 30.0%
!! TTATTCAGTTAGGCTTTGTT+TGG - tig0024727:11805-11824 Msa1419760:CDS 30.0%
CATTAAGACGTTAGGATTAT+GGG + tig0024727:12284-12303 None:intergenic 30.0%
ACATTAAGACGTTAGGATTA+TGG + tig0024727:12285-12304 None:intergenic 30.0%
! TAATGTTTTGCGTAAAGATG+TGG - tig0024727:12299-12318 Msa1419760:CDS 30.0%
! ATATTGATAATCTGAGAGAC+TGG - tig0024727:12354-12373 Msa1419760:intron 30.0%
CTGAAATAAGTCAATCCAAT+AGG - tig0024727:12902-12921 Msa1419760:CDS 30.0%
! GTTTAAGATTTAGGACCTAT+TGG + tig0024727:12920-12939 None:intergenic 30.0%
TCCTAAATCTTAAACTTCTG+TGG - tig0024727:12925-12944 Msa1419760:CDS 30.0%
! ACCACAGAAGTTTAAGATTT+AGG + tig0024727:12929-12948 None:intergenic 30.0%
! TCTATGATTATTTTCTCCAC+AGG - tig0024727:12964-12983 Msa1419760:intron 30.0%
GTTGTTTATTTGCTTCATAC+AGG - tig0024727:13315-13334 Msa1419760:intron 30.0%
CCAATATCCTGTGAATATAT+TGG + tig0024727:13345-13364 None:intergenic 30.0%
CCAATATATTCACAGGATAT+TGG - tig0024727:13342-13361 Msa1419760:intron 30.0%
ATACATATTGGATATGTCTG+TGG - tig0024727:13707-13726 Msa1419760:intron 30.0%
TACATATTGGATATGTCTGT+GGG - tig0024727:13708-13727 Msa1419760:intron 30.0%
! AGGGGAATTTTATACAAAGA+AGG - tig0024727:13754-13773 Msa1419760:intron 30.0%
! CCCATCTATTTCATACTTTT+TGG - tig0024727:14089-14108 Msa1419760:intron 30.0%
! CCCAAAAAGTATGAAATAGA+TGG + tig0024727:14093-14112 None:intergenic 30.0%
TCCTAAGCAAACAAATTTGA+CGG + tig0024727:14124-14143 None:intergenic 30.0%
AGGCAAGAAGATCTTAAAAA+AGG - tig0024727:14214-14233 Msa1419760:intron 30.0%
GGCAAGAAGATCTTAAAAAA+GGG - tig0024727:14215-14234 Msa1419760:intron 30.0%
AGAAGATCTTAAAAAAGGGA+AGG - tig0024727:14219-14238 Msa1419760:intron 30.0%
AGCATAGAAAATGAATGACA+AGG - tig0024727:14303-14322 Msa1419760:intron 30.0%
GCATAGAAAATGAATGACAA+GGG - tig0024727:14304-14323 Msa1419760:intron 30.0%
TTCACTTTCAAATCAATTGC+AGG - tig0024727:14360-14379 Msa1419760:intron 30.0%
! TTAGATTTGGCTTCTATAGA+GGG - tig0024727:14409-14428 Msa1419760:intron 30.0%
TTTCCAGTACTTCATAGTAT+TGG - tig0024727:14577-14596 Msa1419760:intron 30.0%
TATCCAATACTATGAAGTAC+TGG + tig0024727:14583-14602 None:intergenic 30.0%
TGTAAAGCAGGAAAAATGAT+AGG + tig0024727:14651-14670 None:intergenic 30.0%
!! ATCATTTTTCCTGCTTTACA+TGG - tig0024727:14651-14670 Msa1419760:intron 30.0%
ATTATTCTTCCATGTAAAGC+AGG + tig0024727:14663-14682 None:intergenic 30.0%
!!! TTTGATTCATTGCCGTTTTT+AGG + tig0024727:14848-14867 None:intergenic 30.0%
TTAGTAAATCACTTAGGAGA+AGG - tig0024727:14909-14928 Msa1419760:CDS 30.0%
CTCATCTTCATTTCTCTATT+TGG + tig0024727:11270-11289 None:intergenic 30.0%
AATAGAGAAATGAAGATGAG+CGG - tig0024727:11270-11289 Msa1419760:three_prime_UTR 30.0%
ATAGGTTAGAATAAGATGAG+AGG + tig0024727:11411-11430 None:intergenic 30.0%
GCAACAATTGAAAAAGGAAT+AGG + tig0024727:11429-11448 None:intergenic 30.0%
ATGAAGGCAACAATTGAAAA+AGG + tig0024727:11435-11454 None:intergenic 30.0%
!! AGTTTTCAAGATAGTCAAGA+GGG + tig0024727:11540-11559 None:intergenic 30.0%
!! TAGTTTTCAAGATAGTCAAG+AGG + tig0024727:11541-11560 None:intergenic 30.0%
TTGACTATCTTGAAAACTAG+AGG - tig0024727:11542-11561 Msa1419760:three_prime_UTR 30.0%
!! TTATTCAGTTAGGCTTTGTT+TGG - tig0024727:11805-11824 Msa1419760:CDS 30.0%
CATTAAGACGTTAGGATTAT+GGG + tig0024727:12284-12303 None:intergenic 30.0%
ACATTAAGACGTTAGGATTA+TGG + tig0024727:12285-12304 None:intergenic 30.0%
! TAATGTTTTGCGTAAAGATG+TGG - tig0024727:12299-12318 Msa1419760:CDS 30.0%
! ATATTGATAATCTGAGAGAC+TGG - tig0024727:12354-12373 Msa1419760:intron 30.0%
CTGAAATAAGTCAATCCAAT+AGG - tig0024727:12902-12921 Msa1419760:CDS 30.0%
! GTTTAAGATTTAGGACCTAT+TGG + tig0024727:12920-12939 None:intergenic 30.0%
TCCTAAATCTTAAACTTCTG+TGG - tig0024727:12925-12944 Msa1419760:CDS 30.0%
! ACCACAGAAGTTTAAGATTT+AGG + tig0024727:12929-12948 None:intergenic 30.0%
! TCTATGATTATTTTCTCCAC+AGG - tig0024727:12964-12983 Msa1419760:intron 30.0%
GTTGTTTATTTGCTTCATAC+AGG - tig0024727:13315-13334 Msa1419760:intron 30.0%
CCAATATCCTGTGAATATAT+TGG + tig0024727:13345-13364 None:intergenic 30.0%
CCAATATATTCACAGGATAT+TGG - tig0024727:13342-13361 Msa1419760:intron 30.0%
ATACATATTGGATATGTCTG+TGG - tig0024727:13707-13726 Msa1419760:intron 30.0%
TACATATTGGATATGTCTGT+GGG - tig0024727:13708-13727 Msa1419760:intron 30.0%
! AGGGGAATTTTATACAAAGA+AGG - tig0024727:13754-13773 Msa1419760:intron 30.0%
! CCCATCTATTTCATACTTTT+TGG - tig0024727:14089-14108 Msa1419760:intron 30.0%
! CCCAAAAAGTATGAAATAGA+TGG + tig0024727:14093-14112 None:intergenic 30.0%
TCCTAAGCAAACAAATTTGA+CGG + tig0024727:14124-14143 None:intergenic 30.0%
AGGCAAGAAGATCTTAAAAA+AGG - tig0024727:14214-14233 Msa1419760:intron 30.0%
GGCAAGAAGATCTTAAAAAA+GGG - tig0024727:14215-14234 Msa1419760:intron 30.0%
AGAAGATCTTAAAAAAGGGA+AGG - tig0024727:14219-14238 Msa1419760:intron 30.0%
AGCATAGAAAATGAATGACA+AGG - tig0024727:14303-14322 Msa1419760:intron 30.0%
GCATAGAAAATGAATGACAA+GGG - tig0024727:14304-14323 Msa1419760:intron 30.0%
TTCACTTTCAAATCAATTGC+AGG - tig0024727:14360-14379 Msa1419760:intron 30.0%
! TTAGATTTGGCTTCTATAGA+GGG - tig0024727:14409-14428 Msa1419760:intron 30.0%
TTTCCAGTACTTCATAGTAT+TGG - tig0024727:14577-14596 Msa1419760:intron 30.0%
TATCCAATACTATGAAGTAC+TGG + tig0024727:14583-14602 None:intergenic 30.0%
TGTAAAGCAGGAAAAATGAT+AGG + tig0024727:14651-14670 None:intergenic 30.0%
!! ATCATTTTTCCTGCTTTACA+TGG - tig0024727:14651-14670 Msa1419760:intron 30.0%
ATTATTCTTCCATGTAAAGC+AGG + tig0024727:14663-14682 None:intergenic 30.0%
!!! TTTGATTCATTGCCGTTTTT+AGG + tig0024727:14848-14867 None:intergenic 30.0%
TTAGTAAATCACTTAGGAGA+AGG - tig0024727:14909-14928 Msa1419760:CDS 30.0%
GAATAAGATGAGAGGAGAAA+TGG + tig0024727:11403-11422 None:intergenic 35.0%
! TACAGCTACGTCTTTTACAA+AGG + tig0024727:11492-11511 None:intergenic 35.0%
!! TTCACTTTTCTGAGGGTTTT+GGG + tig0024727:12235-12254 None:intergenic 35.0%
ACGCAAAACATTAAGACGTT+AGG + tig0024727:12292-12311 None:intergenic 35.0%
CCATATCTTTACACGCAAAT+TGG + tig0024727:12407-12426 None:intergenic 35.0%
CCAATTTGCGTGTAAAGATA+TGG - tig0024727:12404-12423 Msa1419760:intron 35.0%
ATAGAGTATACGAGCATATG+TGG - tig0024727:12466-12485 Msa1419760:CDS 35.0%
! AGGGGAAACAATTATTTCTC+CGG - tig0024727:12569-12588 Msa1419760:intron 35.0%
CTATAAGCTCTCCTAAACTT+TGG - tig0024727:12853-12872 Msa1419760:CDS 35.0%
!! GCTTTTAGCTAAGACTGTAA+GGG - tig0024727:13152-13171 Msa1419760:CDS 35.0%
AGGTAGACCAATATATTCAC+AGG - tig0024727:13335-13354 Msa1419760:intron 35.0%
TAAGTTAGAAATCCCAGACT+CGG + tig0024727:13464-13483 None:intergenic 35.0%
! AGACAGCTATCTTCTGAAAA+AGG - tig0024727:13483-13502 Msa1419760:intron 35.0%
! AAGGTTTCAGCTTTAGTAAC+AGG - tig0024727:13734-13753 Msa1419760:intron 35.0%
! AGGTTTCAGCTTTAGTAACA+GGG - tig0024727:13735-13754 Msa1419760:intron 35.0%
CTTACTGTTCTCAACTTCTA+AGG - tig0024727:13892-13911 Msa1419760:intron 35.0%
! TCCGTCAAATTTGTTTGCTT+AGG - tig0024727:14120-14139 Msa1419760:intron 35.0%
AAATCAATTGCAGGTTGTAC+TGG - tig0024727:14369-14388 Msa1419760:intron 35.0%
AGCAGCTTTCTTGTTAGATT+TGG - tig0024727:14396-14415 Msa1419760:intron 35.0%
! GTTAGATTTGGCTTCTATAG+AGG - tig0024727:14408-14427 Msa1419760:intron 35.0%
!! AACTGCATAAAGGTACCTTT+CGG + tig0024727:14807-14826 None:intergenic 35.0%
AACGGCAATGAATCAAAGAA+AGG - tig0024727:14851-14870 Msa1419760:intron 35.0%
GAATAAGATGAGAGGAGAAA+TGG + tig0024727:11403-11422 None:intergenic 35.0%
! TACAGCTACGTCTTTTACAA+AGG + tig0024727:11492-11511 None:intergenic 35.0%
!! TTCACTTTTCTGAGGGTTTT+GGG + tig0024727:12235-12254 None:intergenic 35.0%
ACGCAAAACATTAAGACGTT+AGG + tig0024727:12292-12311 None:intergenic 35.0%
CCATATCTTTACACGCAAAT+TGG + tig0024727:12407-12426 None:intergenic 35.0%
CCAATTTGCGTGTAAAGATA+TGG - tig0024727:12404-12423 Msa1419760:intron 35.0%
ATAGAGTATACGAGCATATG+TGG - tig0024727:12466-12485 Msa1419760:CDS 35.0%
! AGGGGAAACAATTATTTCTC+CGG - tig0024727:12569-12588 Msa1419760:intron 35.0%
CTATAAGCTCTCCTAAACTT+TGG - tig0024727:12853-12872 Msa1419760:CDS 35.0%
!! GCTTTTAGCTAAGACTGTAA+GGG - tig0024727:13152-13171 Msa1419760:CDS 35.0%
AGGTAGACCAATATATTCAC+AGG - tig0024727:13335-13354 Msa1419760:intron 35.0%
TAAGTTAGAAATCCCAGACT+CGG + tig0024727:13464-13483 None:intergenic 35.0%
! AGACAGCTATCTTCTGAAAA+AGG - tig0024727:13483-13502 Msa1419760:intron 35.0%
! AAGGTTTCAGCTTTAGTAAC+AGG - tig0024727:13734-13753 Msa1419760:intron 35.0%
! AGGTTTCAGCTTTAGTAACA+GGG - tig0024727:13735-13754 Msa1419760:intron 35.0%
CTTACTGTTCTCAACTTCTA+AGG - tig0024727:13892-13911 Msa1419760:intron 35.0%
! TCCGTCAAATTTGTTTGCTT+AGG - tig0024727:14120-14139 Msa1419760:intron 35.0%
AAATCAATTGCAGGTTGTAC+TGG - tig0024727:14369-14388 Msa1419760:intron 35.0%
AGCAGCTTTCTTGTTAGATT+TGG - tig0024727:14396-14415 Msa1419760:intron 35.0%
! GTTAGATTTGGCTTCTATAG+AGG - tig0024727:14408-14427 Msa1419760:intron 35.0%
!! AACTGCATAAAGGTACCTTT+CGG + tig0024727:14807-14826 None:intergenic 35.0%
AACGGCAATGAATCAAAGAA+AGG - tig0024727:14851-14870 Msa1419760:intron 35.0%
!! AGAAATGGTGTTACCAGGAA+TGG + tig0024727:11388-11407 None:intergenic 40.0%
CGGAGAAAACTGAAGAATGA+AGG + tig0024727:11451-11470 None:intergenic 40.0%
TAGTCAAGAGGGTTGAAAGA+TGG + tig0024727:11529-11548 None:intergenic 40.0%
!! TCAGTTAGGCTTTGTTTGGA+TGG - tig0024727:11809-11828 Msa1419760:CDS 40.0%
AACTCCCAAACAAAGCCTAA+GGG + tig0024727:12018-12037 None:intergenic 40.0%
AAACTCCCAAACAAAGCCTA+AGG + tig0024727:12019-12038 None:intergenic 40.0%
!! TTAGGCTTTGTTTGGGAGTT+TGG - tig0024727:12018-12037 Msa1419760:intron 40.0%
! AAGGAAAGGAAAGGCTTTGA+GGG - tig0024727:12046-12065 Msa1419760:CDS 40.0%
! TTTGAGGGGTGCAAAATATG+AGG - tig0024727:12061-12080 Msa1419760:CDS 40.0%
!! TCACTTTTCTGAGGGTTTTG+GGG + tig0024727:12234-12253 None:intergenic 40.0%
!! GTTCACTTTTCTGAGGGTTT+TGG + tig0024727:12236-12255 None:intergenic 40.0%
!! CTCAACGTTCACTTTTCTGA+GGG + tig0024727:12242-12261 None:intergenic 40.0%
!! ACTCAACGTTCACTTTTCTG+AGG + tig0024727:12243-12262 None:intergenic 40.0%
TGCTCGTATACTCTATAGCA+TGG + tig0024727:12462-12481 None:intergenic 40.0%
! GGGGAAACAATTATTTCTCC+GGG - tig0024727:12570-12589 Msa1419760:intron 40.0%
! TTTTGACAGGGGAATAGCAA+GGG + tig0024727:12616-12635 None:intergenic 40.0%
AACCATATGCGCCAAAGTTT+AGG + tig0024727:12867-12886 None:intergenic 40.0%
AGTTGCAAACACCTACAGAT+TGG - tig0024727:13092-13111 Msa1419760:intron 40.0%
!!! TGTTTTTTCACTTCCACCAC+CGG + tig0024727:13123-13142 None:intergenic 40.0%
! GTGGTGGAAGTGAAAAAACA+CGG - tig0024727:13123-13142 Msa1419760:CDS 40.0%
AAGTGAAAAAACACGGAGTG+TGG - tig0024727:13130-13149 Msa1419760:CDS 40.0%
!! GGCTTTTAGCTAAGACTGTA+AGG - tig0024727:13151-13170 Msa1419760:CDS 40.0%
GTAAGGGAAACACTACATCA+CGG - tig0024727:13168-13187 Msa1419760:intron 40.0%
ATTGGTTGAAGAAGATGCGA+AGG - tig0024727:13360-13379 Msa1419760:intron 40.0%
TTTCATGCTTCAACTGATGC+TGG - tig0024727:13409-13428 Msa1419760:intron 40.0%
!! GCATTTTGATGAAGCAGATC+AGG - tig0024727:13618-13637 Msa1419760:intron 40.0%
TGACTCATGACTAATGCTCA+AGG + tig0024727:13683-13702 None:intergenic 40.0%
! GGTTTCAGCTTTAGTAACAG+GGG - tig0024727:13736-13755 Msa1419760:intron 40.0%
!!! ACAAAGAAGGAGCATTTTCC+AGG - tig0024727:13767-13786 Msa1419760:intron 40.0%
!! GAGCTTTAAAATCACCATGG+TGG - tig0024727:13985-14004 Msa1419760:intron 40.0%
! AATTTGCTCATCGTCCCATT+GGG + tig0024727:14161-14180 None:intergenic 40.0%
TGGCTTCTATAGAGGGAAAT+TGG - tig0024727:14416-14435 Msa1419760:intron 40.0%
GGCTTCTATAGAGGGAAATT+GGG - tig0024727:14417-14436 Msa1419760:intron 40.0%
ATTGGGACGACTATTTGGAA+CGG - tig0024727:14434-14453 Msa1419760:intron 40.0%
ATTGCCAAATGTTACGAGGA+AGG - tig0024727:14457-14476 Msa1419760:intron 40.0%
TACATTGACATGCGAACTCA+AGG + tig0024727:14611-14630 None:intergenic 40.0%
GCAGGAAAAATGATAGGCAT+TGG + tig0024727:14645-14664 None:intergenic 40.0%
GGTACCTTTATGCAGTTACT+TGG - tig0024727:14810-14829 Msa1419760:intron 40.0%
ACCTTTATGCAGTTACTTGG+TGG - tig0024727:14813-14832 Msa1419760:intron 40.0%
!!! GATTCATTGCCGTTTTTAGG+TGG + tig0024727:14845-14864 None:intergenic 40.0%
!! AGAAATGGTGTTACCAGGAA+TGG + tig0024727:11388-11407 None:intergenic 40.0%
CGGAGAAAACTGAAGAATGA+AGG + tig0024727:11451-11470 None:intergenic 40.0%
TAGTCAAGAGGGTTGAAAGA+TGG + tig0024727:11529-11548 None:intergenic 40.0%
!! TCAGTTAGGCTTTGTTTGGA+TGG - tig0024727:11809-11828 Msa1419760:CDS 40.0%
AACTCCCAAACAAAGCCTAA+GGG + tig0024727:12018-12037 None:intergenic 40.0%
AAACTCCCAAACAAAGCCTA+AGG + tig0024727:12019-12038 None:intergenic 40.0%
!! TTAGGCTTTGTTTGGGAGTT+TGG - tig0024727:12018-12037 Msa1419760:intron 40.0%
! AAGGAAAGGAAAGGCTTTGA+GGG - tig0024727:12046-12065 Msa1419760:CDS 40.0%
! TTTGAGGGGTGCAAAATATG+AGG - tig0024727:12061-12080 Msa1419760:CDS 40.0%
!! TCACTTTTCTGAGGGTTTTG+GGG + tig0024727:12234-12253 None:intergenic 40.0%
!! GTTCACTTTTCTGAGGGTTT+TGG + tig0024727:12236-12255 None:intergenic 40.0%
!! CTCAACGTTCACTTTTCTGA+GGG + tig0024727:12242-12261 None:intergenic 40.0%
!! ACTCAACGTTCACTTTTCTG+AGG + tig0024727:12243-12262 None:intergenic 40.0%
TGCTCGTATACTCTATAGCA+TGG + tig0024727:12462-12481 None:intergenic 40.0%
! GGGGAAACAATTATTTCTCC+GGG - tig0024727:12570-12589 Msa1419760:intron 40.0%
! TTTTGACAGGGGAATAGCAA+GGG + tig0024727:12616-12635 None:intergenic 40.0%
AACCATATGCGCCAAAGTTT+AGG + tig0024727:12867-12886 None:intergenic 40.0%
AGTTGCAAACACCTACAGAT+TGG - tig0024727:13092-13111 Msa1419760:intron 40.0%
!!! TGTTTTTTCACTTCCACCAC+CGG + tig0024727:13123-13142 None:intergenic 40.0%
! GTGGTGGAAGTGAAAAAACA+CGG - tig0024727:13123-13142 Msa1419760:CDS 40.0%
AAGTGAAAAAACACGGAGTG+TGG - tig0024727:13130-13149 Msa1419760:CDS 40.0%
!! GGCTTTTAGCTAAGACTGTA+AGG - tig0024727:13151-13170 Msa1419760:CDS 40.0%
GTAAGGGAAACACTACATCA+CGG - tig0024727:13168-13187 Msa1419760:intron 40.0%
ATTGGTTGAAGAAGATGCGA+AGG - tig0024727:13360-13379 Msa1419760:intron 40.0%
TTTCATGCTTCAACTGATGC+TGG - tig0024727:13409-13428 Msa1419760:intron 40.0%
!! GCATTTTGATGAAGCAGATC+AGG - tig0024727:13618-13637 Msa1419760:intron 40.0%
TGACTCATGACTAATGCTCA+AGG + tig0024727:13683-13702 None:intergenic 40.0%
! GGTTTCAGCTTTAGTAACAG+GGG - tig0024727:13736-13755 Msa1419760:intron 40.0%
!!! ACAAAGAAGGAGCATTTTCC+AGG - tig0024727:13767-13786 Msa1419760:intron 40.0%
!! GAGCTTTAAAATCACCATGG+TGG - tig0024727:13985-14004 Msa1419760:intron 40.0%
! AATTTGCTCATCGTCCCATT+GGG + tig0024727:14161-14180 None:intergenic 40.0%
TGGCTTCTATAGAGGGAAAT+TGG - tig0024727:14416-14435 Msa1419760:intron 40.0%
GGCTTCTATAGAGGGAAATT+GGG - tig0024727:14417-14436 Msa1419760:intron 40.0%
ATTGGGACGACTATTTGGAA+CGG - tig0024727:14434-14453 Msa1419760:intron 40.0%
ATTGCCAAATGTTACGAGGA+AGG - tig0024727:14457-14476 Msa1419760:intron 40.0%
TACATTGACATGCGAACTCA+AGG + tig0024727:14611-14630 None:intergenic 40.0%
GCAGGAAAAATGATAGGCAT+TGG + tig0024727:14645-14664 None:intergenic 40.0%
GGTACCTTTATGCAGTTACT+TGG - tig0024727:14810-14829 Msa1419760:intron 40.0%
ACCTTTATGCAGTTACTTGG+TGG - tig0024727:14813-14832 Msa1419760:intron 40.0%
!!! GATTCATTGCCGTTTTTAGG+TGG + tig0024727:14845-14864 None:intergenic 40.0%
AGAGAAATGAAGATGAGCGG+CGG - tig0024727:11273-11292 Msa1419760:three_prime_UTR 45.0%
GTTGTTGAGAAACAGAGGCA+TGG + tig0024727:11331-11350 None:intergenic 45.0%
!! AATGGTGTTACCAGGAATGG+AGG + tig0024727:11385-11404 None:intergenic 45.0%
!! AGAGGAGAAATGGTGTTACC+AGG + tig0024727:11393-11412 None:intergenic 45.0%
AAGAGGGTTGAAAGATGGTG+AGG + tig0024727:11524-11543 None:intergenic 45.0%
!! GTTAGGCTTTGTTTGGATGG+AGG - tig0024727:11812-11831 Msa1419760:CDS 45.0%
TGTTTGGATGGAGGATTTCG+AGG - tig0024727:11821-11840 Msa1419760:CDS 45.0%
GTTTGGATGGAGGATTTCGA+GGG - tig0024727:11822-11841 Msa1419760:CDS 45.0%
TTTGGATGGAGGATTTCGAG+GGG - tig0024727:11823-11842 Msa1419760:CDS 45.0%
CAAAGCCTAAGGGTCTGTTT+GGG + tig0024727:12008-12027 None:intergenic 45.0%
ACAAAGCCTAAGGGTCTGTT+TGG + tig0024727:12009-12028 None:intergenic 45.0%
!! ACAGACCCTTAGGCTTTGTT+TGG - tig0024727:12010-12029 Msa1419760:intron 45.0%
!! CAGACCCTTAGGCTTTGTTT+GGG - tig0024727:12011-12030 Msa1419760:intron 45.0%
!! GCTTTGTTTGGGAGTTTGGA+GGG - tig0024727:12022-12041 Msa1419760:intron 45.0%
! CTTTGTTTGGGAGTTTGGAG+GGG - tig0024727:12023-12042 Msa1419760:intron 45.0%
GAAGGAAAGGAAAGGCTTTG+AGG - tig0024727:12045-12064 Msa1419760:CDS 45.0%
!! AGGAAAGGAAAGGCTTTGAG+GGG - tig0024727:12047-12066 Msa1419760:CDS 45.0%
!!! ACTTTTCTGAGGGTTTTGGG+GGG + tig0024727:12232-12251 None:intergenic 45.0%
!! CACTTTTCTGAGGGTTTTGG+GGG + tig0024727:12233-12252 None:intergenic 45.0%
ATTAATCCTTGCTTGGCACC+CGG + tig0024727:12591-12610 None:intergenic 45.0%
AAGGGGGATTAATCCTTGCT+TGG + tig0024727:12598-12617 None:intergenic 45.0%
TTTGACAGGGGAATAGCAAG+GGG + tig0024727:12615-12634 None:intergenic 45.0%
! CTTTTGACAGGGGAATAGCA+AGG + tig0024727:12617-12636 None:intergenic 45.0%
CTCCTAAACTTTGGCGCATA+TGG - tig0024727:12862-12881 Msa1419760:CDS 45.0%
CCACGAAAAAGGGATGAACA+TGG + tig0024727:13040-13059 None:intergenic 45.0%
!! CCATGTTCATCCCTTTTTCG+TGG - tig0024727:13037-13056 Msa1419760:intron 45.0%
CACCTACAGATTGGAAATGC+CGG - tig0024727:13101-13120 Msa1419760:intron 45.0%
!! ACTTTGCGCTCTAAGACATC+AGG + tig0024727:13592-13611 None:intergenic 45.0%
TCTTAGAGCGCAAAGTGAAG+CGG - tig0024727:13596-13615 Msa1419760:intron 45.0%
TGGATATGTCTGTGGGTGAA+AGG - tig0024727:13715-13734 Msa1419760:intron 45.0%
ACAAAAGGTCGTGCAAATCC+TGG + tig0024727:13788-13807 None:intergenic 45.0%
! ACCTTTTGTGTTCAACGCTG+AGG - tig0024727:13799-13818 Msa1419760:intron 45.0%
! ACCTCAGCGTTGAACACAAA+AGG + tig0024727:13803-13822 None:intergenic 45.0%
TCAACGCTGAGGTTATGTTG+AGG - tig0024727:13810-13829 Msa1419760:intron 45.0%
TAGAAGCTAAAGATGCTGCC+AGG - tig0024727:13961-13980 Msa1419760:intron 45.0%
AGAAGCTAAAGATGCTGCCA+GGG - tig0024727:13962-13981 Msa1419760:intron 45.0%
!!! TGGTGATTTTAAAGCTCCCC+TGG + tig0024727:13982-14001 None:intergenic 45.0%
!! GGGGAGCTTTAAAATCACCA+TGG - tig0024727:13982-14001 Msa1419760:intron 45.0%
!! AAATCACCATGGTGGACTCT+AGG - tig0024727:13993-14012 Msa1419760:intron 45.0%
GACTCTAGGCTGCATGTATA+GGG - tig0024727:14007-14026 Msa1419760:intron 45.0%
ACGTTGCTGATATAGCCCAA+TGG - tig0024727:14143-14162 Msa1419760:intron 45.0%
CGTTGCTGATATAGCCCAAT+GGG - tig0024727:14144-14163 Msa1419760:intron 45.0%
! CAATTTGCTCATCGTCCCAT+TGG + tig0024727:14162-14181 None:intergenic 45.0%
TAAGGAGAAGGTGACTGAAG+AGG - tig0024727:14189-14208 Msa1419760:intron 45.0%
AAGGAGAAGGTGACTGAAGA+GGG - tig0024727:14190-14209 Msa1419760:intron 45.0%
GGGAAATTGGGACGACTATT+TGG - tig0024727:14429-14448 Msa1419760:intron 45.0%
! ACGGATTGCCAAATGTTACG+AGG - tig0024727:14453-14472 Msa1419760:intron 45.0%
TCCTCCTTCCTCGTAACATT+TGG + tig0024727:14464-14483 None:intergenic 45.0%
! AGTACTGGAAACGCTGAACA+GGG + tig0024727:14568-14587 None:intergenic 45.0%
!! AAGTACTGGAAACGCTGAAC+AGG + tig0024727:14569-14588 None:intergenic 45.0%
GCCACCAAGTAACTGCATAA+AGG + tig0024727:14817-14836 None:intergenic 45.0%
! TGGCCTTGACCACCTAAAAA+CGG - tig0024727:14833-14852 Msa1419760:intron 45.0%
!!! TTGCCGTTTTTAGGTGGTCA+AGG + tig0024727:14839-14858 None:intergenic 45.0%
AGAGAAATGAAGATGAGCGG+CGG - tig0024727:11273-11292 Msa1419760:three_prime_UTR 45.0%
GTTGTTGAGAAACAGAGGCA+TGG + tig0024727:11331-11350 None:intergenic 45.0%
!! AATGGTGTTACCAGGAATGG+AGG + tig0024727:11385-11404 None:intergenic 45.0%
!! AGAGGAGAAATGGTGTTACC+AGG + tig0024727:11393-11412 None:intergenic 45.0%
AAGAGGGTTGAAAGATGGTG+AGG + tig0024727:11524-11543 None:intergenic 45.0%
!! GTTAGGCTTTGTTTGGATGG+AGG - tig0024727:11812-11831 Msa1419760:CDS 45.0%
TGTTTGGATGGAGGATTTCG+AGG - tig0024727:11821-11840 Msa1419760:CDS 45.0%
GTTTGGATGGAGGATTTCGA+GGG - tig0024727:11822-11841 Msa1419760:CDS 45.0%
TTTGGATGGAGGATTTCGAG+GGG - tig0024727:11823-11842 Msa1419760:CDS 45.0%
CAAAGCCTAAGGGTCTGTTT+GGG + tig0024727:12008-12027 None:intergenic 45.0%
ACAAAGCCTAAGGGTCTGTT+TGG + tig0024727:12009-12028 None:intergenic 45.0%
!! ACAGACCCTTAGGCTTTGTT+TGG - tig0024727:12010-12029 Msa1419760:intron 45.0%
!! CAGACCCTTAGGCTTTGTTT+GGG - tig0024727:12011-12030 Msa1419760:intron 45.0%
!! GCTTTGTTTGGGAGTTTGGA+GGG - tig0024727:12022-12041 Msa1419760:intron 45.0%
! CTTTGTTTGGGAGTTTGGAG+GGG - tig0024727:12023-12042 Msa1419760:intron 45.0%
GAAGGAAAGGAAAGGCTTTG+AGG - tig0024727:12045-12064 Msa1419760:CDS 45.0%
!! AGGAAAGGAAAGGCTTTGAG+GGG - tig0024727:12047-12066 Msa1419760:CDS 45.0%
!!! ACTTTTCTGAGGGTTTTGGG+GGG + tig0024727:12232-12251 None:intergenic 45.0%
!! CACTTTTCTGAGGGTTTTGG+GGG + tig0024727:12233-12252 None:intergenic 45.0%
ATTAATCCTTGCTTGGCACC+CGG + tig0024727:12591-12610 None:intergenic 45.0%
AAGGGGGATTAATCCTTGCT+TGG + tig0024727:12598-12617 None:intergenic 45.0%
TTTGACAGGGGAATAGCAAG+GGG + tig0024727:12615-12634 None:intergenic 45.0%
! CTTTTGACAGGGGAATAGCA+AGG + tig0024727:12617-12636 None:intergenic 45.0%
CTCCTAAACTTTGGCGCATA+TGG - tig0024727:12862-12881 Msa1419760:CDS 45.0%
CCACGAAAAAGGGATGAACA+TGG + tig0024727:13040-13059 None:intergenic 45.0%
!! CCATGTTCATCCCTTTTTCG+TGG - tig0024727:13037-13056 Msa1419760:intron 45.0%
CACCTACAGATTGGAAATGC+CGG - tig0024727:13101-13120 Msa1419760:intron 45.0%
!! ACTTTGCGCTCTAAGACATC+AGG + tig0024727:13592-13611 None:intergenic 45.0%
TCTTAGAGCGCAAAGTGAAG+CGG - tig0024727:13596-13615 Msa1419760:intron 45.0%
TGGATATGTCTGTGGGTGAA+AGG - tig0024727:13715-13734 Msa1419760:intron 45.0%
ACAAAAGGTCGTGCAAATCC+TGG + tig0024727:13788-13807 None:intergenic 45.0%
! ACCTTTTGTGTTCAACGCTG+AGG - tig0024727:13799-13818 Msa1419760:intron 45.0%
! ACCTCAGCGTTGAACACAAA+AGG + tig0024727:13803-13822 None:intergenic 45.0%
TCAACGCTGAGGTTATGTTG+AGG - tig0024727:13810-13829 Msa1419760:intron 45.0%
TAGAAGCTAAAGATGCTGCC+AGG - tig0024727:13961-13980 Msa1419760:intron 45.0%
AGAAGCTAAAGATGCTGCCA+GGG - tig0024727:13962-13981 Msa1419760:intron 45.0%
!!! TGGTGATTTTAAAGCTCCCC+TGG + tig0024727:13982-14001 None:intergenic 45.0%
!! GGGGAGCTTTAAAATCACCA+TGG - tig0024727:13982-14001 Msa1419760:intron 45.0%
!! AAATCACCATGGTGGACTCT+AGG - tig0024727:13993-14012 Msa1419760:intron 45.0%
GACTCTAGGCTGCATGTATA+GGG - tig0024727:14007-14026 Msa1419760:intron 45.0%
ACGTTGCTGATATAGCCCAA+TGG - tig0024727:14143-14162 Msa1419760:intron 45.0%
CGTTGCTGATATAGCCCAAT+GGG - tig0024727:14144-14163 Msa1419760:intron 45.0%
! CAATTTGCTCATCGTCCCAT+TGG + tig0024727:14162-14181 None:intergenic 45.0%
TAAGGAGAAGGTGACTGAAG+AGG - tig0024727:14189-14208 Msa1419760:intron 45.0%
AAGGAGAAGGTGACTGAAGA+GGG - tig0024727:14190-14209 Msa1419760:intron 45.0%
GGGAAATTGGGACGACTATT+TGG - tig0024727:14429-14448 Msa1419760:intron 45.0%
! ACGGATTGCCAAATGTTACG+AGG - tig0024727:14453-14472 Msa1419760:intron 45.0%
TCCTCCTTCCTCGTAACATT+TGG + tig0024727:14464-14483 None:intergenic 45.0%
! AGTACTGGAAACGCTGAACA+GGG + tig0024727:14568-14587 None:intergenic 45.0%
!! AAGTACTGGAAACGCTGAAC+AGG + tig0024727:14569-14588 None:intergenic 45.0%
GCCACCAAGTAACTGCATAA+AGG + tig0024727:14817-14836 None:intergenic 45.0%
! TGGCCTTGACCACCTAAAAA+CGG - tig0024727:14833-14852 Msa1419760:intron 45.0%
!!! TTGCCGTTTTTAGGTGGTCA+AGG + tig0024727:14839-14858 None:intergenic 45.0%
GCACGGTTGTTGAGAAACAG+AGG + tig0024727:11336-11355 None:intergenic 50.0%
AGATGCGAAGAGAAGCTGCA+CGG + tig0024727:11353-11372 None:intergenic 50.0%
TCTTCTTCCTCCTCCATTCC+TGG - tig0024727:11372-11391 Msa1419760:three_prime_UTR 50.0%
GGAAACATGCTCTGCGACAA+CGG + tig0024727:11471-11490 None:intergenic 50.0%
AGGGTTGAAAGATGGTGAGG+AGG + tig0024727:11521-11540 None:intergenic 50.0%
AGGATTTCGAGGGGAAGTGA+GGG - tig0024727:11832-11851 Msa1419760:CDS 50.0%
!!! TTTGGGAGGGGGGTTTTGAA+GGG + tig0024727:11991-12010 None:intergenic 50.0%
!! GGCTTTGTTTGGGAGTTTGG+AGG - tig0024727:12021-12040 Msa1419760:intron 50.0%
TTGGAGGGGAAGGAAAGGAA+AGG - tig0024727:12037-12056 Msa1419760:intron 50.0%
!!! GGGTTTTGGGGGGTTTTGAA+GGG + tig0024727:12222-12241 None:intergenic 50.0%
!!! AGGGTTTTGGGGGGTTTTGA+AGG + tig0024727:12223-12242 None:intergenic 50.0%
TTGACAGGGGAATAGCAAGG+GGG + tig0024727:12614-12633 None:intergenic 50.0%
! ACCGGAGCTGTCTTTTGACA+GGG + tig0024727:12628-12647 None:intergenic 50.0%
! TACCGGAGCTGTCTTTTGAC+AGG + tig0024727:12629-12648 None:intergenic 50.0%
GTCAAAAGACAGCTCCGGTA+AGG - tig0024727:12629-12648 Msa1419760:intron 50.0%
CAGTGCAGTTACAGAACCTG+TGG + tig0024727:12983-13002 None:intergenic 50.0%
ATGAACATGGAGCCTCACTG+GGG + tig0024727:13027-13046 None:intergenic 50.0%
GATGAACATGGAGCCTCACT+GGG + tig0024727:13028-13047 None:intergenic 50.0%
CACCGGCATTTCCAATCTGT+AGG + tig0024727:13106-13125 None:intergenic 50.0%
CTACAGATTGGAAATGCCGG+TGG - tig0024727:13104-13123 Msa1419760:intron 50.0%
AGGGAAACACTACATCACGG+TGG - tig0024727:13171-13190 Msa1419760:intron 50.0%
! AAGGGTGATTTTGCCGAGTC+TGG - tig0024727:13448-13467 Msa1419760:intron 50.0%
! AGGGTGATTTTGCCGAGTCT+GGG - tig0024727:13449-13468 Msa1419760:intron 50.0%
GAAGCTAAAGATGCTGCCAG+GGG - tig0024727:13963-13982 Msa1419760:intron 50.0%
GGACTCTAGGCTGCATGTAT+AGG - tig0024727:14006-14025 Msa1419760:intron 50.0%
AGAAGGTGACTGAAGAGGGA+AGG - tig0024727:14194-14213 Msa1419760:intron 50.0%
GCCAAATGTTACGAGGAAGG+AGG - tig0024727:14460-14479 Msa1419760:intron 50.0%
!! GTGTACCAGCAAGTACCGAA+AGG - tig0024727:14789-14808 Msa1419760:CDS 50.0%
AGGTACCTTTCGGTACTTGC+TGG + tig0024727:14797-14816 None:intergenic 50.0%
GCACGGTTGTTGAGAAACAG+AGG + tig0024727:11336-11355 None:intergenic 50.0%
AGATGCGAAGAGAAGCTGCA+CGG + tig0024727:11353-11372 None:intergenic 50.0%
TCTTCTTCCTCCTCCATTCC+TGG - tig0024727:11372-11391 Msa1419760:three_prime_UTR 50.0%
GGAAACATGCTCTGCGACAA+CGG + tig0024727:11471-11490 None:intergenic 50.0%
AGGGTTGAAAGATGGTGAGG+AGG + tig0024727:11521-11540 None:intergenic 50.0%
AGGATTTCGAGGGGAAGTGA+GGG - tig0024727:11832-11851 Msa1419760:CDS 50.0%
!!! TTTGGGAGGGGGGTTTTGAA+GGG + tig0024727:11991-12010 None:intergenic 50.0%
!! GGCTTTGTTTGGGAGTTTGG+AGG - tig0024727:12021-12040 Msa1419760:intron 50.0%
TTGGAGGGGAAGGAAAGGAA+AGG - tig0024727:12037-12056 Msa1419760:intron 50.0%
!!! GGGTTTTGGGGGGTTTTGAA+GGG + tig0024727:12222-12241 None:intergenic 50.0%
!!! AGGGTTTTGGGGGGTTTTGA+AGG + tig0024727:12223-12242 None:intergenic 50.0%
TTGACAGGGGAATAGCAAGG+GGG + tig0024727:12614-12633 None:intergenic 50.0%
! ACCGGAGCTGTCTTTTGACA+GGG + tig0024727:12628-12647 None:intergenic 50.0%
! TACCGGAGCTGTCTTTTGAC+AGG + tig0024727:12629-12648 None:intergenic 50.0%
GTCAAAAGACAGCTCCGGTA+AGG - tig0024727:12629-12648 Msa1419760:intron 50.0%
CAGTGCAGTTACAGAACCTG+TGG + tig0024727:12983-13002 None:intergenic 50.0%
ATGAACATGGAGCCTCACTG+GGG + tig0024727:13027-13046 None:intergenic 50.0%
GATGAACATGGAGCCTCACT+GGG + tig0024727:13028-13047 None:intergenic 50.0%
CACCGGCATTTCCAATCTGT+AGG + tig0024727:13106-13125 None:intergenic 50.0%
CTACAGATTGGAAATGCCGG+TGG - tig0024727:13104-13123 Msa1419760:intron 50.0%
AGGGAAACACTACATCACGG+TGG - tig0024727:13171-13190 Msa1419760:intron 50.0%
! AAGGGTGATTTTGCCGAGTC+TGG - tig0024727:13448-13467 Msa1419760:intron 50.0%
! AGGGTGATTTTGCCGAGTCT+GGG - tig0024727:13449-13468 Msa1419760:intron 50.0%
GAAGCTAAAGATGCTGCCAG+GGG - tig0024727:13963-13982 Msa1419760:intron 50.0%
GGACTCTAGGCTGCATGTAT+AGG - tig0024727:14006-14025 Msa1419760:intron 50.0%
AGAAGGTGACTGAAGAGGGA+AGG - tig0024727:14194-14213 Msa1419760:intron 50.0%
GCCAAATGTTACGAGGAAGG+AGG - tig0024727:14460-14479 Msa1419760:intron 50.0%
!! GTGTACCAGCAAGTACCGAA+AGG - tig0024727:14789-14808 Msa1419760:CDS 50.0%
AGGTACCTTTCGGTACTTGC+TGG + tig0024727:14797-14816 None:intergenic 50.0%
!! ATGAGCGGCGGAGTATTGTG+TGG - tig0024727:11285-11304 Msa1419760:three_prime_UTR 55.0%
! GGTGTTACCAGGAATGGAGG+AGG + tig0024727:11382-11401 None:intergenic 55.0%
GAGGATTTCGAGGGGAAGTG+AGG - tig0024727:11831-11850 Msa1419760:CDS 55.0%
GGATTTCGAGGGGAAGTGAG+GGG - tig0024727:11833-11852 Msa1419760:CDS 55.0%
!! GTTTGGGAGGGGGGTTTTGA+AGG + tig0024727:11992-12011 None:intergenic 55.0%
TAAGGGTCTGTTTGGGAGGG+GGG + tig0024727:12001-12020 None:intergenic 55.0%
CTAAGGGTCTGTTTGGGAGG+GGG + tig0024727:12002-12021 None:intergenic 55.0%
CCTAAGGGTCTGTTTGGGAG+GGG + tig0024727:12003-12022 None:intergenic 55.0%
GCCTAAGGGTCTGTTTGGGA+GGG + tig0024727:12004-12023 None:intergenic 55.0%
AGCCTAAGGGTCTGTTTGGG+AGG + tig0024727:12005-12024 None:intergenic 55.0%
GTTTGGGAGTTTGGAGGGGA+AGG - tig0024727:12027-12046 Msa1419760:intron 55.0%
GGAGTTTGGAGGGGAAGGAA+AGG - tig0024727:12032-12051 Msa1419760:intron 55.0%
ATTTCTCCGGGTGCCAAGCA+AGG - tig0024727:12582-12601 Msa1419760:intron 55.0%
! CCGGAGCTGTCTTTTGACAG+GGG + tig0024727:12627-12646 None:intergenic 55.0%
CCCCTGTCAAAAGACAGCTC+CGG - tig0024727:12624-12643 Msa1419760:intron 55.0%
CTGTAACTGCACTGCTGCGA+TGG - tig0024727:12989-13008 Msa1419760:intron 55.0%
GGATGAACATGGAGCCTCAC+TGG + tig0024727:13029-13048 None:intergenic 55.0%
CAGATTGGAAATGCCGGTGG+TGG - tig0024727:13107-13126 Msa1419760:intron 55.0%
ATGCAGCCTAGAGTCCACCA+TGG + tig0024727:14002-14021 None:intergenic 55.0%
TGACACTACGAAACCTGCGC+AGG + tig0024727:14247-14266 None:intergenic 55.0%
!! ATGAGCGGCGGAGTATTGTG+TGG - tig0024727:11285-11304 Msa1419760:three_prime_UTR 55.0%
! GGTGTTACCAGGAATGGAGG+AGG + tig0024727:11382-11401 None:intergenic 55.0%
GAGGATTTCGAGGGGAAGTG+AGG - tig0024727:11831-11850 Msa1419760:CDS 55.0%
GGATTTCGAGGGGAAGTGAG+GGG - tig0024727:11833-11852 Msa1419760:CDS 55.0%
!! GTTTGGGAGGGGGGTTTTGA+AGG + tig0024727:11992-12011 None:intergenic 55.0%
TAAGGGTCTGTTTGGGAGGG+GGG + tig0024727:12001-12020 None:intergenic 55.0%
CTAAGGGTCTGTTTGGGAGG+GGG + tig0024727:12002-12021 None:intergenic 55.0%
CCTAAGGGTCTGTTTGGGAG+GGG + tig0024727:12003-12022 None:intergenic 55.0%
GCCTAAGGGTCTGTTTGGGA+GGG + tig0024727:12004-12023 None:intergenic 55.0%
AGCCTAAGGGTCTGTTTGGG+AGG + tig0024727:12005-12024 None:intergenic 55.0%
GTTTGGGAGTTTGGAGGGGA+AGG - tig0024727:12027-12046 Msa1419760:intron 55.0%
GGAGTTTGGAGGGGAAGGAA+AGG - tig0024727:12032-12051 Msa1419760:intron 55.0%
ATTTCTCCGGGTGCCAAGCA+AGG - tig0024727:12582-12601 Msa1419760:intron 55.0%
! CCGGAGCTGTCTTTTGACAG+GGG + tig0024727:12627-12646 None:intergenic 55.0%
CCCCTGTCAAAAGACAGCTC+CGG - tig0024727:12624-12643 Msa1419760:intron 55.0%
CTGTAACTGCACTGCTGCGA+TGG - tig0024727:12989-13008 Msa1419760:intron 55.0%
GGATGAACATGGAGCCTCAC+TGG + tig0024727:13029-13048 None:intergenic 55.0%
CAGATTGGAAATGCCGGTGG+TGG - tig0024727:13107-13126 Msa1419760:intron 55.0%
ATGCAGCCTAGAGTCCACCA+TGG + tig0024727:14002-14021 None:intergenic 55.0%
TGACACTACGAAACCTGCGC+AGG + tig0024727:14247-14266 None:intergenic 55.0%
!! AGCGGCGGAGTATTGTGTGG+CGG - tig0024727:11288-11307 Msa1419760:three_prime_UTR 60.0%
TTTCGAGGGGAAGTGAGGGG+AGG - tig0024727:11836-11855 Msa1419760:CDS 60.0%
CCCCTCCCAAACAGACCCTT+AGG - tig0024727:12000-12019 Msa1419760:intron 60.0%
AACATGGAGCCTCACTGGGG+TGG + tig0024727:13024-13043 None:intergenic 60.0%
!! AGCGGCGGAGTATTGTGTGG+CGG - tig0024727:11288-11307 Msa1419760:three_prime_UTR 60.0%
TTTCGAGGGGAAGTGAGGGG+AGG - tig0024727:11836-11855 Msa1419760:CDS 60.0%
CCCCTCCCAAACAGACCCTT+AGG - tig0024727:12000-12019 Msa1419760:intron 60.0%
AACATGGAGCCTCACTGGGG+TGG + tig0024727:13024-13043 None:intergenic 60.0%
CCTCACTGGGGTGGAGCTGT+GGG + tig0024727:13015-13034 None:intergenic 65.0%
!! AAAAGGGAAGGCGCCTGCGC+AGG - tig0024727:14231-14250 Msa1419760:intron 65.0%
CCTCACTGGGGTGGAGCTGT+GGG + tig0024727:13015-13034 None:intergenic 65.0%
!! AAAAGGGAAGGCGCCTGCGC+AGG - tig0024727:14231-14250 Msa1419760:intron 65.0%
CCCACAGCTCCACCCCAGTG+AGG - tig0024727:13012-13031 Msa1419760:intron 70.0%
GCCTCACTGGGGTGGAGCTG+TGG + tig0024727:13016-13035 None:intergenic 70.0%
CCCACAGCTCCACCCCAGTG+AGG - tig0024727:13012-13031 Msa1419760:intron 70.0%
GCCTCACTGGGGTGGAGCTG+TGG + tig0024727:13016-13035 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
tig0024727 gene 11234 15056 11234 ID=Msa1419760;Name=Msa1419760
tig0024727 mRNA 11234 15056 11234 ID=Msa1419760-mRNA-1;Parent=Msa1419760;Name=Msa1419760-mRNA-1;_AED=0.13;_eAED=0.13;_QI=45|1|1|1|1|1|11|537|343
tig0024727 exon 11234 11908 11234 ID=Msa1419760-mRNA-1:exon:1077;Parent=Msa1419760-mRNA-1
tig0024727 exon 12038 12148 12038 ID=Msa1419760-mRNA-1:exon:1076;Parent=Msa1419760-mRNA-1
tig0024727 exon 12262 12343 12262 ID=Msa1419760-mRNA-1:exon:1075;Parent=Msa1419760-mRNA-1
tig0024727 exon 12459 12553 12459 ID=Msa1419760-mRNA-1:exon:1074;Parent=Msa1419760-mRNA-1
tig0024727 exon 12651 12713 12651 ID=Msa1419760-mRNA-1:exon:1073;Parent=Msa1419760-mRNA-1
tig0024727 exon 12786 12953 12786 ID=Msa1419760-mRNA-1:exon:1072;Parent=Msa1419760-mRNA-1
tig0024727 exon 13123 13180 13123 ID=Msa1419760-mRNA-1:exon:1071;Parent=Msa1419760-mRNA-1
tig0024727 exon 13262 13304 13262 ID=Msa1419760-mRNA-1:exon:1070;Parent=Msa1419760-mRNA-1
tig0024727 exon 13645 13719 13645 ID=Msa1419760-mRNA-1:exon:1069;Parent=Msa1419760-mRNA-1
tig0024727 exon 14727 14810 14727 ID=Msa1419760-mRNA-1:exon:1068;Parent=Msa1419760-mRNA-1
tig0024727 exon 14897 15056 14897 ID=Msa1419760-mRNA-1:exon:1067;Parent=Msa1419760-mRNA-1
tig0024727 five_prime_UTR 15012 15056 15012 ID=Msa1419760-mRNA-1:five_prime_utr;Parent=Msa1419760-mRNA-1
tig0024727 CDS 14897 15011 14897 ID=Msa1419760-mRNA-1:cds;Parent=Msa1419760-mRNA-1
tig0024727 CDS 14727 14810 14727 ID=Msa1419760-mRNA-1:cds;Parent=Msa1419760-mRNA-1
tig0024727 CDS 13645 13719 13645 ID=Msa1419760-mRNA-1:cds;Parent=Msa1419760-mRNA-1
tig0024727 CDS 13262 13304 13262 ID=Msa1419760-mRNA-1:cds;Parent=Msa1419760-mRNA-1
tig0024727 CDS 13123 13180 13123 ID=Msa1419760-mRNA-1:cds;Parent=Msa1419760-mRNA-1
tig0024727 CDS 12786 12953 12786 ID=Msa1419760-mRNA-1:cds;Parent=Msa1419760-mRNA-1
tig0024727 CDS 12651 12713 12651 ID=Msa1419760-mRNA-1:cds;Parent=Msa1419760-mRNA-1
tig0024727 CDS 12459 12553 12459 ID=Msa1419760-mRNA-1:cds;Parent=Msa1419760-mRNA-1
tig0024727 CDS 12262 12343 12262 ID=Msa1419760-mRNA-1:cds;Parent=Msa1419760-mRNA-1
tig0024727 CDS 12038 12148 12038 ID=Msa1419760-mRNA-1:cds;Parent=Msa1419760-mRNA-1
tig0024727 CDS 11771 11908 11771 ID=Msa1419760-mRNA-1:cds;Parent=Msa1419760-mRNA-1
tig0024727 three_prime_UTR 11234 11770 11234 ID=Msa1419760-mRNA-1:three_prime_utr;Parent=Msa1419760-mRNA-1
Gene Sequence

>Msa1419760

ATGAAGATGAGCGGCGGAGTATTGTGTGGCGGAACTTCACGCAGCAACGCCATGCCTCTGTTTCTCAACAACCGTGCAGCTTCTCTTCGCATCTCTTCTTCCTCCTCCATTCCTGAGCATGTTTCCTTTGTAAAAGACGTAGCTGTAACTCAACCTCCTCACCATCTTTCAACCCTCTTGACTATCTTGAAAACTAGAGGGGAAACAATTATTTCTCCGGGTGCCAAGCAAGGATTAATCCCCCTTGCTATTCCCCTGTCAAAAGACAGCTCCGGTTCTGTAACTGCACTGCTGCGATGGCCCACAGCTCCACCCCAATTGGAAATGCCGGTGGTGGAAGTGAAAAAACACGGAGTGTGGCTTTTAGCTAAGACTGTAGACCAATATATTCACAGGATATTGGTTGAAGAAGATGCGAAGGACAGTCGAGAGAGAAATGAAGAACTCTTTCATGCTTCAACTGATGCTGGAGAAAAGTTTTATAGAAAGGGTGATTTTGCCGAGTCTGGGATTTCTAACTTAGACAGCTATCTTCTGAAAAAGGTTGGTATATTTCCTGATGTCTTAGAGCGCAAAGTGAAGCGGCATTTTGATGAAGCAGATCAGGTTTCAGCTTTAGTAACAGGGGAATTTTATACAAAGAAGGAGCATTTTCCAGGATTTGCACGACCTTTTGTGTTCAACGCTGAGGTTATGTTGAGGGTTGGGCGTAAAGTAGAAGCTAAAGATGCTGCCAGGGGAGCTTTAAAATCACCATGGTGGACTCTAGGCTGCATGTATAGGGACGTTGCTGATATAGCCCAATGGGACGATGAGCAAATTGAGTATATTAAGGAGAAGGTGACTGAAGAGGGAAGGCAAGAAGATCTTAAAAAAGGGAAGGCGCCTGCGCAGGTTGTACTGGATGAAGCAGCTTTCTTGTTAGATTTGGCTTCTATAGAGGGAAATTGGGACGACTATTTGGAACGGATTGCCAAATGTTACGAGGAAGGAGGACTTGACGATATTGCAAAATTCATTCTTTACAAATAA

Protein sequence

>Msa1419760

MKMSGGVLCGGTSRSNAMPLFLNNRAASLRISSSSSIPEHVSFVKDVAVTQPPHHLSTLLTILKTRGETIISPGAKQGLIPLAIPLSKDSSGSVTALLRWPTAPPQLEMPVVEVKKHGVWLLAKTVDQYIHRILVEEDAKDSRERNEELFHASTDAGEKFYRKGDFAESGISNLDSYLLKKVGIFPDVLERKVKRHFDEADQVSALVTGEFYTKKEHFPGFARPFVFNAEVMLRVGRKVEAKDAARGALKSPWWTLGCMYRDVADIAQWDDEQIEYIKEKVTEEGRQEDLKKGKAPAQVVLDEAAFLLDLASIEGNWDDYLERIAKCYEEGGLDDIAKFILYK*