AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0450390

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0450390 MtrunA17_Chr3g0117331 96.988 332 10 0 1 332 1 332 0.0 668
Msa0450390 MtrunA17_Chr4g0058851 58.702 339 132 2 1 332 1 338 1.32e-138 396
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0450390 AT5G63050.1 42.197 346 185 3 1 332 1 345 5.93e-92 278
Msa0450390 AT5G63050.2 42.012 338 181 3 9 332 3 339 4.94e-89 270

Find 128 sgRNAs with CRISPR-Local

Find 240 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAACTTCAATTCCTCTTAT+TGG 0.103995 3_3:+35788228 Msa0450390:five_prime_UTR
TAAAGCAAAATATTTGTTTA+AGG 0.141032 3_3:+35788879 Msa0450390:CDS
TTCATGAACAAACCTCTTTC+TGG 0.154202 3_3:+35791072 Msa0450390:three_prime_UTR
CAAAGGAACTAACTCCATTA+TGG 0.172017 3_3:+35790323 Msa0450390:CDS
TGAGTCATTTGTAGAGTTTC+AGG 0.172652 3_3:-35789797 None:intergenic
AAGATTGAATGTATTCTTAA+AGG 0.196300 3_3:+35790689 Msa0450390:exon
CGGCATCCAGGGCCAGAAAA+TGG 0.197024 3_3:-35789859 None:intergenic
TTAAAGGCGGTTTAATAAAA+TGG 0.199655 3_3:+35788527 Msa0450390:exon
AGTACCTTCTTGGTGCATTT+TGG 0.204122 3_3:+35790447 Msa0450390:CDS
TTCTTCATTTATGTTATGTT+AGG 0.213182 3_3:+35788109 Msa0450390:five_prime_UTR
AAAACCCCAGCACCATAAAA+TGG 0.234882 3_3:-35790794 None:intergenic
TCCTATTGATTGAGTGGATT+TGG 0.241995 3_3:+35788497 Msa0450390:five_prime_UTR
TCAATGTACTCTTCTGATTA+TGG 0.271471 3_3:-35791232 None:intergenic
TGGATTTGGATAAAGTTTAA+AGG 0.280675 3_3:+35788511 Msa0450390:five_prime_UTR
ATATAAATTCAACATGAATT+AGG 0.299154 3_3:-35790848 None:intergenic
TACTTAGGAAAGTACCTTCT+TGG 0.309515 3_3:+35790437 Msa0450390:CDS
ATTCAGGAAGCAGGGCTAAT+TGG 0.312850 3_3:+35789564 Msa0450390:CDS
AAAGGAACTAACTCCATTAT+GGG 0.335355 3_3:+35790324 Msa0450390:CDS
CTGATTGCCCGACAATAATA+TGG 0.338312 3_3:-35790640 None:intergenic
GTAGTCTTCAGAAACGTTAA+AGG 0.349621 3_3:+35790711 Msa0450390:three_prime_UTR
ATTTATATTGTTCTTAGATT+AGG 0.354240 3_3:+35790863 Msa0450390:three_prime_UTR
AAGATATTTGTTGTGTATCA+TGG 0.363737 3_3:+35791439 Msa0450390:three_prime_UTR
TTGATTATGTGGAATCAATA+TGG 0.372639 3_3:+35790617 Msa0450390:CDS
TTGACAAAACATCACATGAT+TGG 0.398022 3_3:+35788833 Msa0450390:CDS
TCTTCATTTATGTTATGTTA+GGG 0.399452 3_3:+35788110 Msa0450390:five_prime_UTR
AAGAATATTGAAAGTATTGA+AGG 0.401732 3_3:+35790573 Msa0450390:CDS
AATCCTCAAAGGTTTGATCT+TGG 0.402035 3_3:-35789510 None:intergenic
TACAAGGTTCGATATGAGAT+TGG 0.408487 3_3:+35790923 Msa0450390:three_prime_UTR
TTTGAAAGGAAATTGAAATT+GGG 0.413161 3_3:-35788138 None:intergenic
AGAACTCAAAATGATAATTC+AGG 0.416403 3_3:+35789548 Msa0450390:CDS
TGATCTATACCGATTCATAA+TGG 0.417570 3_3:+35791343 Msa0450390:three_prime_UTR
CTGGCTGTTAATGTAAAATA+TGG 0.423757 3_3:+35790289 Msa0450390:CDS
CTGCAGTGTTCCTCTGTACC+TGG 0.423978 3_3:+35790270 Msa0450390:intron
GGCATCCAGGGCCAGAAAAT+GGG 0.424640 3_3:-35789858 None:intergenic
ATGTGTAAAGCCACAATTAG+TGG 0.427250 3_3:-35790355 None:intergenic
GATGATAGACAGAAGCGATA+TGG 0.428748 3_3:-35788077 None:intergenic
CTTTCTGGTTGAGGTGCGAA+TGG 0.433073 3_3:+35791087 Msa0450390:three_prime_UTR
ATCATGTTGTTTGTTTAACC+TGG 0.434484 3_3:+35791041 Msa0450390:three_prime_UTR
GGCATTTGTCATGGAGCAAA+AGG 0.445901 3_3:+35788792 Msa0450390:CDS
TAGTCTTCAGAAACGTTAAA+GGG 0.448494 3_3:+35790712 Msa0450390:three_prime_UTR
TAAACAAACAACATGATAGA+TGG 0.450560 3_3:-35791035 None:intergenic
AAAATGATAATTCAGGAAGC+AGG 0.451996 3_3:+35789555 Msa0450390:CDS
AACAAACCTCTTTCTGGTTG+AGG 0.453914 3_3:+35791078 Msa0450390:three_prime_UTR
TGAGCAAGTTAATGATAATG+AGG 0.465716 3_3:+35790816 Msa0450390:three_prime_UTR
TCCAAATCCACTCAATCAAT+AGG 0.466011 3_3:-35788498 None:intergenic
TCATCTTTGATCAATTGTAA+TGG 0.467286 3_3:-35791143 None:intergenic
GTGGGAGAGGTGGGACAGAC+AGG 0.471739 3_3:-35790988 None:intergenic
GTATCGTTATTGCGGCATCC+AGG 0.474711 3_3:-35789871 None:intergenic
TTTGGCACACGCAATGTTTG+AGG 0.481474 3_3:-35791507 None:intergenic
AAACCCCAGCACCATAAAAT+GGG 0.489534 3_3:-35790793 None:intergenic
CAATATGGCCATATTATTGT+CGG 0.490731 3_3:+35790632 Msa0450390:CDS
CTGTTGGACTTGAGGAGAGT+GGG 0.492845 3_3:+35789606 Msa0450390:CDS
TTCTCGTATGCATCTGAAGC+AGG 0.495588 3_3:+35789647 Msa0450390:CDS
TTTCCAAGATCAAACCTTTG+AGG 0.495989 3_3:+35789507 Msa0450390:CDS
TCTACAAATGACTCATAGTA+AGG 0.497248 3_3:+35789805 Msa0450390:CDS
ATGTATCATCCATTATGAAT+CGG 0.497826 3_3:-35791352 None:intergenic
GTGAAACCGTGTCCAATAAG+AGG 0.498058 3_3:-35788240 None:intergenic
TTCGCACCTCAACCAGAAAG+AGG 0.501967 3_3:-35791084 None:intergenic
AGTATTGAAGGAATGGTTAA+CGG 0.502530 3_3:+35790585 Msa0450390:CDS
TATTGAAAGTATTGAAGGAA+TGG 0.502641 3_3:+35790578 Msa0450390:CDS
TTTCTGGTTGAGGTGCGAAT+GGG 0.505383 3_3:+35791088 Msa0450390:three_prime_UTR
GAATGGCTGCTTATATTACA+AGG 0.509954 3_3:+35790907 Msa0450390:three_prime_UTR
CAAATGACTCATAGTAAGGA+TGG 0.513548 3_3:+35789809 Msa0450390:CDS
AATATGGCCATATTATTGTC+GGG 0.515586 3_3:+35790633 Msa0450390:CDS
TACATTGATTTGCATGGCAA+TGG 0.519600 3_3:+35791247 Msa0450390:three_prime_UTR
GAAGAGTACATTGATTTGCA+TGG 0.522440 3_3:+35791241 Msa0450390:three_prime_UTR
GGACAAGTATCTTGATTATG+TGG 0.523655 3_3:+35790606 Msa0450390:CDS
TTGAGGATTTCATGCTTCAA+AGG 0.523800 3_3:+35789524 Msa0450390:CDS
CCAGCACCATAAAATGGGAT+TGG 0.525969 3_3:-35790788 None:intergenic
GCTTCAGATGCATACGAGAA+TGG 0.526668 3_3:-35789644 None:intergenic
GAGGAGATGATGCAAGCGCC+AGG 0.526955 3_3:+35788047 Msa0450390:five_prime_UTR
GAAGCAGGGCTAATTGGTTG+AGG 0.530888 3_3:+35789570 Msa0450390:CDS
TGGAAGACCGACGACTTCCA+CGG 0.534268 3_3:+35789769 Msa0450390:CDS
AATAGGTCCTATTGATTGAG+TGG 0.534706 3_3:+35788491 Msa0450390:intron
GGTACAAAGTTTGTGTATGC+AGG 0.536589 3_3:-35791014 None:intergenic
TAAAACCTCTGTTGGACTTG+AGG 0.537590 3_3:+35789598 Msa0450390:CDS
TCATGTTGTTTGTTTAACCT+GGG 0.542065 3_3:+35791042 Msa0450390:three_prime_UTR
AGGGCACCTAAAACCTCTGT+TGG 0.544521 3_3:+35789590 Msa0450390:CDS
CTTCCACAAGGCATTTGTCA+TGG 0.548170 3_3:+35788783 Msa0450390:CDS
AAGCAGGGCTAATTGGTTGA+GGG 0.550081 3_3:+35789571 Msa0450390:CDS
TCTATGCCTCAAGCTTCAAT+CGG 0.551892 3_3:+35790404 Msa0450390:CDS
TGATGAATGTCAAGAATGGA+AGG 0.553533 3_3:-35788180 None:intergenic
CTTTGTAGCACATCAACCTC+AGG 0.554598 3_3:+35788551 Msa0450390:CDS
ATATGGTGCTGAAGTTTCAA+AGG 0.559682 3_3:+35790306 Msa0450390:CDS
ATCGGACTGTCAAAATACTT+AGG 0.561447 3_3:+35790422 Msa0450390:CDS
TGCAGGACAGTGGGAGAGGT+GGG 0.561980 3_3:-35790997 None:intergenic
GTTCGTAATCTGTGTAGTTG+TGG 0.562712 3_3:+35791467 Msa0450390:three_prime_UTR
GGTTGAGGTGCGAATGGGCA+AGG 0.563835 3_3:+35791093 Msa0450390:three_prime_UTR
ATAATGATGAATGTCAAGAA+TGG 0.564335 3_3:-35788184 None:intergenic
TATCGTTATTGCGGCATCCA+GGG 0.564738 3_3:-35789870 None:intergenic
CTGTGTAGTTGTGGCTTGTG+AGG 0.565226 3_3:+35791476 Msa0450390:three_prime_UTR
CTGAGGTTGATGTGCTACAA+AGG 0.572849 3_3:-35788550 None:intergenic
TTGAAGCATGAAATCCTCAA+AGG 0.573371 3_3:-35789521 None:intergenic
AAATGATAATTCAGGAAGCA+GGG 0.576629 3_3:+35789556 Msa0450390:CDS
ATCATCATGTCATGAAGTAG+AGG 0.576715 3_3:+35789739 Msa0450390:CDS
CAACAAAGGTATCGTTATTG+CGG 0.587856 3_3:-35789879 None:intergenic
TCTGTTGGACTTGAGGAGAG+TGG 0.592854 3_3:+35789605 Msa0450390:CDS
TGTATGCAGGACAGTGGGAG+AGG 0.595444 3_3:-35791001 None:intergenic
TTACACATCATTATAATCCG+TGG 0.595663 3_3:+35790370 Msa0450390:CDS
GTTTGTGTATGCAGGACAGT+GGG 0.600867 3_3:-35791006 None:intergenic
TGGGATTGGCCAGATCTCGT+TGG 0.602616 3_3:-35790774 None:intergenic
GTGAATGAGCAGTTGCAGAA+TGG 0.602991 3_3:-35790948 None:intergenic
GTCTTCAGAAACGTTAAAGG+GGG 0.605259 3_3:+35790714 Msa0450390:three_prime_UTR
GGTAAAACCGTGGAAGTCGT+CGG 0.605507 3_3:-35789776 None:intergenic
ATCTTGGAAACACAAAAGCA+AGG 0.606943 3_3:-35789494 None:intergenic
TTTGCCAAAATGCACCAAGA+AGG 0.609660 3_3:-35790451 None:intergenic
TCAATTCCTCTTATTGGACA+CGG 0.616417 3_3:+35788234 Msa0450390:five_prime_UTR
ATGCAGGACAGTGGGAGAGG+TGG 0.617641 3_3:-35790998 None:intergenic
ATGGTGCGGTGGAGGTGCGG+TGG 0.622701 3_3:+35791309 Msa0450390:intron
TGTAGTTGTGGCTTGTGAGG+TGG 0.623820 3_3:+35791479 Msa0450390:three_prime_UTR
TCATCATGTCATGAAGTAGA+GGG 0.626639 3_3:+35789740 Msa0450390:CDS
GACAGTCCGATTGAAGCTTG+AGG 0.626974 3_3:-35790410 None:intergenic
AAGCGATATGGTAAGACACC+TGG 0.629203 3_3:-35788065 None:intergenic
ATTTGGATAAAGTTTAAAGG+CGG 0.631633 3_3:+35788514 Msa0450390:five_prime_UTR
GAAAAGCAGATGATGTTGCA+AGG 0.634556 3_3:-35789676 None:intergenic
TGTTGGACTTGAGGAGAGTG+GGG 0.637585 3_3:+35789607 Msa0450390:CDS
ACATTAACAGCCAGGTACAG+AGG 0.638292 3_3:-35790280 None:intergenic
CATAGAGTGCACACAGACCA+CGG 0.640979 3_3:-35790387 None:intergenic
TCATAGTAAGGATGGAAGTG+AGG 0.641660 3_3:+35789817 Msa0450390:CDS
TATACTTACAATATCAACAA+AGG 0.651557 3_3:-35789893 None:intergenic
AGTTTGTGTATGCAGGACAG+TGG 0.654838 3_3:-35791007 None:intergenic
ACATGATTGGAAGAACAGAC+TGG 0.656412 3_3:+35788846 Msa0450390:CDS
AGTCTTCAGAAACGTTAAAG+GGG 0.659696 3_3:+35790713 Msa0450390:three_prime_UTR
TAGAGTTTCAGGTAAAACCG+TGG 0.659711 3_3:-35789786 None:intergenic
GCTCCATGACAAATGCCTTG+TGG 0.663009 3_3:-35788786 None:intergenic
ACTCTCCTCAAGTCCAACAG+AGG 0.671948 3_3:-35789603 None:intergenic
TGTATGTGACATCTTCCACA+AGG 0.700212 3_3:+35788771 Msa0450390:CDS
TTGGAAACACAAAAGCAAGG+AGG 0.755210 3_3:-35789491 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATTTACAAAAATTGAAAT+TGG + chr3_3:35791405-35791424 Msa0450390:three_prime_UTR 10.0%
!!! AACAAATATTTTGCTTTAAT+AGG - chr3_3:35788877-35788896 None:intergenic 15.0%
!! TAAAGCAAAATATTTGTTTA+AGG + chr3_3:35788879-35788898 Msa0450390:CDS 15.0%
!! AAATGTACTATAGATATATT+TGG - chr3_3:35789140-35789159 None:intergenic 15.0%
!! TGTTATAATATATTTGTGAA+AGG + chr3_3:35789936-35789955 Msa0450390:intron 15.0%
!! ATTTAAGGAAAATAAAATGA+AGG + chr3_3:35790100-35790119 Msa0450390:intron 15.0%
!! TTTAAGGAAAATAAAATGAA+GGG + chr3_3:35790101-35790120 Msa0450390:intron 15.0%
!! ATATAAATTCAACATGAATT+AGG - chr3_3:35790851-35790870 None:intergenic 15.0%
!! ATTTATATTGTTCTTAGATT+AGG + chr3_3:35790863-35790882 Msa0450390:three_prime_UTR 15.0%
!! TTCTTCATTTATGTTATGTT+AGG + chr3_3:35788109-35788128 Msa0450390:five_prime_UTR 20.0%
!! TCTTCATTTATGTTATGTTA+GGG + chr3_3:35788110-35788129 Msa0450390:five_prime_UTR 20.0%
!! TTTGAAAGGAAATTGAAATT+GGG - chr3_3:35788141-35788160 None:intergenic 20.0%
!!! TTTTGAAAGGAAATTGAAAT+TGG - chr3_3:35788142-35788161 None:intergenic 20.0%
!! AATGAGAATGAAAATTGAAA+AGG - chr3_3:35788284-35788303 None:intergenic 20.0%
!! AATTAACTGAAAAAGGATAA+AGG - chr3_3:35788370-35788389 None:intergenic 20.0%
!! GAAAATGAATTAACTGAAAA+AGG - chr3_3:35788377-35788396 None:intergenic 20.0%
!!! TTAATTCATTTTCTGTAAGT+CGG + chr3_3:35788384-35788403 Msa0450390:intron 20.0%
!! CAAATTTAAATGCAATTCTA+AGG + chr3_3:35789071-35789090 Msa0450390:intron 20.0%
!!! TGTTTAATTTCTTGTAGAAT+TGG + chr3_3:35789184-35789203 Msa0450390:intron 20.0%
!! TTTATAAGAAGACAAATACA+AGG - chr3_3:35789443-35789462 None:intergenic 20.0%
!! TTGTATTTGTCTTCTTATAA+AGG + chr3_3:35789442-35789461 Msa0450390:intron 20.0%
!! TGTATTTGTCTTCTTATAAA+GGG + chr3_3:35789443-35789462 Msa0450390:intron 20.0%
!! TATACTTACAATATCAACAA+AGG - chr3_3:35789896-35789915 None:intergenic 20.0%
!! TGAATAACAAAACATGTATA+TGG - chr3_3:35789986-35790005 None:intergenic 20.0%
!! TTAAGGAAAATAAAATGAAG+GGG + chr3_3:35790102-35790121 Msa0450390:intron 20.0%
!!! AGTTACATAATATATTGACT+GGG - chr3_3:35790149-35790168 None:intergenic 20.0%
!! TAGTTACATAATATATTGAC+TGG - chr3_3:35790150-35790169 None:intergenic 20.0%
!!! AAGAATATTGAAAGTATTGA+AGG + chr3_3:35790573-35790592 Msa0450390:CDS 20.0%
!! AAGATTGAATGTATTCTTAA+AGG + chr3_3:35790689-35790708 Msa0450390:exon 20.0%
!!! AATTGATTTTTGTCATTGAA+TGG + chr3_3:35790890-35790909 Msa0450390:three_prime_UTR 20.0%
! TTAGTTAGTCGAAAAATAGT+AGG + chr3_3:35788025-35788044 Msa0450390:five_prime_UTR 25.0%
!! AAAAAGGAAAGGATTTTGAA+AGG - chr3_3:35788155-35788174 None:intergenic 25.0%
! ATAATGATGAATGTCAAGAA+TGG - chr3_3:35788187-35788206 None:intergenic 25.0%
!!! ATTGTTACTGATTTCTGAAT+AGG + chr3_3:35788474-35788493 Msa0450390:intron 25.0%
! TGGATTTGGATAAAGTTTAA+AGG + chr3_3:35788511-35788530 Msa0450390:five_prime_UTR 25.0%
! ATTTGGATAAAGTTTAAAGG+CGG + chr3_3:35788514-35788533 Msa0450390:five_prime_UTR 25.0%
! TTAAAGGCGGTTTAATAAAA+TGG + chr3_3:35788527-35788546 Msa0450390:exon 25.0%
! GTCATAAAACTATATAGCAA+TGG - chr3_3:35788626-35788645 None:intergenic 25.0%
! ACAAATCATCTATGAAGTAA+TGG - chr3_3:35788733-35788752 None:intergenic 25.0%
!! GTATCTAATTTTTCACGAAA+AGG - chr3_3:35788922-35788941 None:intergenic 25.0%
! TACCATTGATGTTTACTAAT+AGG - chr3_3:35789001-35789020 None:intergenic 25.0%
! ACTCAGTAAATCTTATCATT+GGG - chr3_3:35789042-35789061 None:intergenic 25.0%
! AACTCAGTAAATCTTATCAT+TGG - chr3_3:35789043-35789062 None:intergenic 25.0%
! AATTCATTTATCTTAGTCCA+TGG - chr3_3:35789102-35789121 None:intergenic 25.0%
! TTAATTTCTTGTAGAATTGG+AGG + chr3_3:35789187-35789206 Msa0450390:intron 25.0%
!! TATGCAAGGAAAATGAATTT+TGG + chr3_3:35789217-35789236 Msa0450390:intron 25.0%
!! ATGCAAGGAAAATGAATTTT+GGG + chr3_3:35789218-35789237 Msa0450390:intron 25.0%
! TTATTTATTGTTTCCAGTGT+AGG + chr3_3:35789467-35789486 Msa0450390:intron 25.0%
! TATTTATTGTTTCCAGTGTA+GGG + chr3_3:35789468-35789487 Msa0450390:intron 25.0%
! AGAACTCAAAATGATAATTC+AGG + chr3_3:35789548-35789567 Msa0450390:CDS 25.0%
!! CATGTATATGGTATTGAAAA+AGG - chr3_3:35789974-35789993 None:intergenic 25.0%
!!! AAACTTTAGGTTGGAATTTA+AGG + chr3_3:35790085-35790104 Msa0450390:intron 25.0%
! TAAGGAAAATAAAATGAAGG+GGG + chr3_3:35790103-35790122 Msa0450390:intron 25.0%
! TATTGTGCAATCAATGTATT+AGG - chr3_3:35790219-35790238 None:intergenic 25.0%
!!! TATTGAAAGTATTGAAGGAA+TGG + chr3_3:35790578-35790597 Msa0450390:CDS 25.0%
! TTGATTATGTGGAATCAATA+TGG + chr3_3:35790617-35790636 Msa0450390:CDS 25.0%
! TAAACAAACAACATGATAGA+TGG - chr3_3:35791038-35791057 None:intergenic 25.0%
! TCATCTTTGATCAATTGTAA+TGG - chr3_3:35791146-35791165 None:intergenic 25.0%
! ATGTATCATCCATTATGAAT+CGG - chr3_3:35791355-35791374 None:intergenic 25.0%
!!! AAGATATTTGTTGTGTATCA+TGG + chr3_3:35791439-35791458 Msa0450390:three_prime_UTR 25.0%
AGAATGGAAGGAAGAAAAAA+AGG - chr3_3:35788171-35788190 None:intergenic 30.0%
TCAACTTCAATTCCTCTTAT+TGG + chr3_3:35788228-35788247 Msa0450390:five_prime_UTR 30.0%
AGCTAGAAAAATAGCACAAA+TGG - chr3_3:35788426-35788445 None:intergenic 30.0%
TGAAGAAGTAAATATACCTG+AGG - chr3_3:35788570-35788589 None:intergenic 30.0%
TTGACAAAACATCACATGAT+TGG + chr3_3:35788833-35788852 Msa0450390:CDS 30.0%
GAAAAATTAGATACCGTGTT+TGG + chr3_3:35788928-35788947 Msa0450390:intron 30.0%
TGCCTATTAGTAAACATCAA+TGG + chr3_3:35788996-35789015 Msa0450390:intron 30.0%
!! TGGTAGAAGTATCTTACAAA+TGG + chr3_3:35789016-35789035 Msa0450390:intron 30.0%
! TGCAAGGAAAATGAATTTTG+GGG + chr3_3:35789219-35789238 Msa0450390:intron 30.0%
AAAATGATAATTCAGGAAGC+AGG + chr3_3:35789555-35789574 Msa0450390:CDS 30.0%
AAATGATAATTCAGGAAGCA+GGG + chr3_3:35789556-35789575 Msa0450390:CDS 30.0%
TTCATGGACTCTTCAAAAAA+TGG + chr3_3:35789696-35789715 Msa0450390:CDS 30.0%
TCTACAAATGACTCATAGTA+AGG + chr3_3:35789805-35789824 Msa0450390:CDS 30.0%
! ATGCTTCAACTTCGATATTT+TGG + chr3_3:35790055-35790074 Msa0450390:intron 30.0%
GCAGATGGAAGATAAAATTA+GGG - chr3_3:35790254-35790273 None:intergenic 30.0%
TGCAGATGGAAGATAAAATT+AGG - chr3_3:35790255-35790274 None:intergenic 30.0%
! CATATTTTACATTAACAGCC+AGG - chr3_3:35790291-35790310 None:intergenic 30.0%
CTGGCTGTTAATGTAAAATA+TGG + chr3_3:35790289-35790308 Msa0450390:CDS 30.0%
AAAGGAACTAACTCCATTAT+GGG + chr3_3:35790324-35790343 Msa0450390:CDS 30.0%
! TAACTCCATTATGGGTTTTT+GGG + chr3_3:35790332-35790351 Msa0450390:CDS 30.0%
TTACACATCATTATAATCCG+TGG + chr3_3:35790370-35790389 Msa0450390:CDS 30.0%
! TTGGCAAACTACTACATTTT+TGG + chr3_3:35790466-35790485 Msa0450390:CDS 30.0%
! AAATTGCAGTCTATCTTTTG+CGG + chr3_3:35790506-35790525 Msa0450390:CDS 30.0%
! ATGTCTTTTAAGCTCGATAT+AGG - chr3_3:35790532-35790551 None:intergenic 30.0%
! AGTATTGAAGGAATGGTTAA+CGG + chr3_3:35790585-35790604 Msa0450390:CDS 30.0%
CAATATGGCCATATTATTGT+CGG + chr3_3:35790632-35790651 Msa0450390:CDS 30.0%
AATATGGCCATATTATTGTC+GGG + chr3_3:35790633-35790652 Msa0450390:CDS 30.0%
TAGTCTTCAGAAACGTTAAA+GGG + chr3_3:35790712-35790731 Msa0450390:three_prime_UTR 30.0%
! TGAGCAAGTTAATGATAATG+AGG + chr3_3:35790816-35790835 Msa0450390:three_prime_UTR 30.0%
! ATCATGTTGTTTGTTTAACC+TGG + chr3_3:35791041-35791060 Msa0450390:three_prime_UTR 30.0%
! TCATGTTGTTTGTTTAACCT+GGG + chr3_3:35791042-35791061 Msa0450390:three_prime_UTR 30.0%
! ACTGAATGTTTTGTATGTTG+TGG + chr3_3:35791172-35791191 Msa0450390:three_prime_UTR 30.0%
! CTGAATGTTTTGTATGTTGT+GGG + chr3_3:35791173-35791192 Msa0450390:three_prime_UTR 30.0%
TCAATGTACTCTTCTGATTA+TGG - chr3_3:35791235-35791254 None:intergenic 30.0%
!! TGATCTATACCGATTCATAA+TGG + chr3_3:35791343-35791362 Msa0450390:three_prime_UTR 30.0%
GTTAGTCGAAAAATAGTAGG+AGG + chr3_3:35788028-35788047 Msa0450390:five_prime_UTR 35.0%
GGAAGGAAGAAAAAAAGGAA+AGG - chr3_3:35788166-35788185 None:intergenic 35.0%
TGATGAATGTCAAGAATGGA+AGG - chr3_3:35788183-35788202 None:intergenic 35.0%
TCAATTCCTCTTATTGGACA+CGG + chr3_3:35788234-35788253 Msa0450390:five_prime_UTR 35.0%
AAGGAAAAGAGAGAATTACG+CGG - chr3_3:35788265-35788284 None:intergenic 35.0%
!! GATAAAGGCATTTGAGAAAG+TGG - chr3_3:35788355-35788374 None:intergenic 35.0%
! AATAGGTCCTATTGATTGAG+TGG + chr3_3:35788491-35788510 Msa0450390:intron 35.0%
! TCCTATTGATTGAGTGGATT+TGG + chr3_3:35788497-35788516 Msa0450390:five_prime_UTR 35.0%
TCCAAATCCACTCAATCAAT+AGG - chr3_3:35788501-35788520 None:intergenic 35.0%
ATGTTCGTATATCTAGTGCT+TGG + chr3_3:35788691-35788710 Msa0450390:intron 35.0%
!!! TGATTTGTTTTCTTGTCGTC+AGG + chr3_3:35788745-35788764 Msa0450390:intron 35.0%
!! GATTTGTTTTCTTGTCGTCA+GGG + chr3_3:35788746-35788765 Msa0450390:intron 35.0%
ATTAGATACCGTGTTTGGTT+TGG + chr3_3:35788933-35788952 Msa0450390:intron 35.0%
TCATTTATCTTAGTCCATGG+AGG - chr3_3:35789099-35789118 None:intergenic 35.0%
TTGGAGGTTTGTATTATGCA+AGG + chr3_3:35789203-35789222 Msa0450390:intron 35.0%
ATCTTGGAAACACAAAAGCA+AGG - chr3_3:35789497-35789516 None:intergenic 35.0%
TTTCCAAGATCAAACCTTTG+AGG + chr3_3:35789507-35789526 Msa0450390:CDS 35.0%
AATCCTCAAAGGTTTGATCT+TGG - chr3_3:35789513-35789532 None:intergenic 35.0%
TTGAAGCATGAAATCCTCAA+AGG - chr3_3:35789524-35789543 None:intergenic 35.0%
TTGAGGATTTCATGCTTCAA+AGG + chr3_3:35789524-35789543 Msa0450390:CDS 35.0%
ATCATCATGTCATGAAGTAG+AGG + chr3_3:35789739-35789758 Msa0450390:CDS 35.0%
TCATCATGTCATGAAGTAGA+GGG + chr3_3:35789740-35789759 Msa0450390:CDS 35.0%
! CATGAAGTAGAGGGAATTTT+TGG + chr3_3:35789749-35789768 Msa0450390:CDS 35.0%
TGAGTCATTTGTAGAGTTTC+AGG - chr3_3:35789800-35789819 None:intergenic 35.0%
CAAATGACTCATAGTAAGGA+TGG + chr3_3:35789809-35789828 Msa0450390:CDS 35.0%
!! CAACAAAGGTATCGTTATTG+CGG - chr3_3:35789882-35789901 None:intergenic 35.0%
! TTTTGGTCGTAGCAAACTTT+AGG + chr3_3:35790072-35790091 Msa0450390:intron 35.0%
AAAATAAAATGAAGGGGGAG+TGG + chr3_3:35790108-35790127 Msa0450390:intron 35.0%
! ATATGGTGCTGAAGTTTCAA+AGG + chr3_3:35790306-35790325 Msa0450390:CDS 35.0%
CAAAGGAACTAACTCCATTA+TGG + chr3_3:35790323-35790342 Msa0450390:CDS 35.0%
! CTAACTCCATTATGGGTTTT+TGG + chr3_3:35790331-35790350 Msa0450390:CDS 35.0%
ATGTGTAAAGCCACAATTAG+TGG - chr3_3:35790358-35790377 None:intergenic 35.0%
ATCGGACTGTCAAAATACTT+AGG + chr3_3:35790422-35790441 Msa0450390:CDS 35.0%
!! TACTTAGGAAAGTACCTTCT+TGG + chr3_3:35790437-35790456 Msa0450390:CDS 35.0%
!! GCAAACTACTACATTTTTGG+CGG + chr3_3:35790469-35790488 Msa0450390:CDS 35.0%
GGACAAGTATCTTGATTATG+TGG + chr3_3:35790606-35790625 Msa0450390:CDS 35.0%
GTAGTCTTCAGAAACGTTAA+AGG + chr3_3:35790711-35790730 Msa0450390:three_prime_UTR 35.0%
AGTCTTCAGAAACGTTAAAG+GGG + chr3_3:35790713-35790732 Msa0450390:three_prime_UTR 35.0%
! AGAAATTTTCCAACGAGATC+TGG + chr3_3:35790765-35790784 Msa0450390:three_prime_UTR 35.0%
GAATGGCTGCTTATATTACA+AGG + chr3_3:35790907-35790926 Msa0450390:three_prime_UTR 35.0%
TACAAGGTTCGATATGAGAT+TGG + chr3_3:35790923-35790942 Msa0450390:three_prime_UTR 35.0%
! TGTTCATGAATTCTTTTCCC+AGG - chr3_3:35791062-35791081 None:intergenic 35.0%
TTCATGAACAAACCTCTTTC+TGG + chr3_3:35791072-35791091 Msa0450390:three_prime_UTR 35.0%
!! GAAGAGTACATTGATTTGCA+TGG + chr3_3:35791241-35791260 Msa0450390:three_prime_UTR 35.0%
!! TACATTGATTTGCATGGCAA+TGG + chr3_3:35791247-35791266 Msa0450390:three_prime_UTR 35.0%
GATGATAGACAGAAGCGATA+TGG - chr3_3:35788080-35788099 None:intergenic 40.0%
TGTATGTGACATCTTCCACA+AGG + chr3_3:35788771-35788790 Msa0450390:CDS 40.0%
ACATGATTGGAAGAACAGAC+TGG + chr3_3:35788846-35788865 Msa0450390:CDS 40.0%
ATTTCTTCAGTTCCATTCCC+TGG + chr3_3:35789372-35789391 Msa0450390:intron 40.0%
TGCATTAGCAACAATCACCA+GGG - chr3_3:35789392-35789411 None:intergenic 40.0%
TTGGAAACACAAAAGCAAGG+AGG - chr3_3:35789494-35789513 None:intergenic 40.0%
! TCAAGTCCAACAGAGGTTTT+AGG - chr3_3:35789599-35789618 None:intergenic 40.0%
TAAAACCTCTGTTGGACTTG+AGG + chr3_3:35789598-35789617 Msa0450390:CDS 40.0%
GAAAAGCAGATGATGTTGCA+AGG - chr3_3:35789679-35789698 None:intergenic 40.0%
!! GCAACATCATCTGCTTTTCA+TGG + chr3_3:35789680-35789699 Msa0450390:CDS 40.0%
! TAGAGTTTCAGGTAAAACCG+TGG - chr3_3:35789789-35789808 None:intergenic 40.0%
TCATAGTAAGGATGGAAGTG+AGG + chr3_3:35789817-35789836 Msa0450390:CDS 40.0%
TCTATGCCTCAAGCTTCAAT+CGG + chr3_3:35790404-35790423 Msa0450390:CDS 40.0%
!! AGTACCTTCTTGGTGCATTT+TGG + chr3_3:35790447-35790466 Msa0450390:CDS 40.0%
TTTGCCAAAATGCACCAAGA+AGG - chr3_3:35790454-35790473 None:intergenic 40.0%
!!! AACTACTACATTTTTGGCGG+CGG + chr3_3:35790472-35790491 Msa0450390:CDS 40.0%
CTGATTGCCCGACAATAATA+TGG - chr3_3:35790643-35790662 None:intergenic 40.0%
GTCTTCAGAAACGTTAAAGG+GGG + chr3_3:35790714-35790733 Msa0450390:three_prime_UTR 40.0%
AACGTTAAAGGGGGTTTGAT+TGG + chr3_3:35790723-35790742 Msa0450390:three_prime_UTR 40.0%
! ATCTGGCCAATCCCATTTTA+TGG + chr3_3:35790782-35790801 Msa0450390:three_prime_UTR 40.0%
! CAATCCCATTTTATGGTGCT+GGG + chr3_3:35790789-35790808 Msa0450390:three_prime_UTR 40.0%
!! AATCCCATTTTATGGTGCTG+GGG + chr3_3:35790790-35790809 Msa0450390:three_prime_UTR 40.0%
AAACCCCAGCACCATAAAAT+GGG - chr3_3:35790796-35790815 None:intergenic 40.0%
AAAACCCCAGCACCATAAAA+TGG - chr3_3:35790797-35790816 None:intergenic 40.0%
GGTACAAAGTTTGTGTATGC+AGG - chr3_3:35791017-35791036 None:intergenic 40.0%
!! AACAAACCTCTTTCTGGTTG+AGG + chr3_3:35791078-35791097 Msa0450390:three_prime_UTR 40.0%
ACAAAAGGTCTGGGGATAAT+TGG - chr3_3:35791289-35791308 None:intergenic 40.0%
! TTATCCCCAGACCTTTTGTA+TGG + chr3_3:35791290-35791309 Msa0450390:intron 40.0%
GTTCGTAATCTGTGTAGTTG+TGG + chr3_3:35791467-35791486 Msa0450390:three_prime_UTR 40.0%
AAGCGATATGGTAAGACACC+TGG - chr3_3:35788068-35788087 None:intergenic 45.0%
GTGAAACCGTGTCCAATAAG+AGG - chr3_3:35788243-35788262 None:intergenic 45.0%
!! CTGAGGTTGATGTGCTACAA+AGG - chr3_3:35788553-35788572 None:intergenic 45.0%
CTTTGTAGCACATCAACCTC+AGG + chr3_3:35788551-35788570 Msa0450390:CDS 45.0%
! CTTCCACAAGGCATTTGTCA+TGG + chr3_3:35788783-35788802 Msa0450390:CDS 45.0%
GGCATTTGTCATGGAGCAAA+AGG + chr3_3:35788792-35788811 Msa0450390:CDS 45.0%
TAGCAACAATCACCAGGGAA+TGG - chr3_3:35789387-35789406 None:intergenic 45.0%
CTGCATTAGCAACAATCACC+AGG - chr3_3:35789393-35789412 None:intergenic 45.0%
CTGGTGATTGTTGCTAATGC+AGG + chr3_3:35789391-35789410 Msa0450390:intron 45.0%
ATTCAGGAAGCAGGGCTAAT+TGG + chr3_3:35789564-35789583 Msa0450390:CDS 45.0%
AAGCAGGGCTAATTGGTTGA+GGG + chr3_3:35789571-35789590 Msa0450390:CDS 45.0%
GCTTCAGATGCATACGAGAA+TGG - chr3_3:35789647-35789666 None:intergenic 45.0%
! TTCTCGTATGCATCTGAAGC+AGG + chr3_3:35789647-35789666 Msa0450390:CDS 45.0%
!!! TGGAAGTGAGGTTTTGAAGC+TGG + chr3_3:35789829-35789848 Msa0450390:CDS 45.0%
TATCGTTATTGCGGCATCCA+GGG - chr3_3:35789873-35789892 None:intergenic 45.0%
GGTCGTAGCAAACTTTAGGT+TGG + chr3_3:35790076-35790095 Msa0450390:intron 45.0%
ACATTAACAGCCAGGTACAG+AGG - chr3_3:35790283-35790302 None:intergenic 45.0%
AGTGGCCCAAAAACCCATAA+TGG - chr3_3:35790340-35790359 None:intergenic 45.0%
!! GGTTTTTGGGCCACTAATTG+TGG + chr3_3:35790345-35790364 Msa0450390:CDS 45.0%
!!! ACTACTACATTTTTGGCGGC+GGG + chr3_3:35790473-35790492 Msa0450390:CDS 45.0%
GTTAAAGGGGGTTTGATTGG+AGG + chr3_3:35790726-35790745 Msa0450390:three_prime_UTR 45.0%
CCAGCACCATAAAATGGGAT+TGG - chr3_3:35790791-35790810 None:intergenic 45.0%
! CCAATCCCATTTTATGGTGC+TGG + chr3_3:35790788-35790807 Msa0450390:three_prime_UTR 45.0%
GTGAATGAGCAGTTGCAGAA+TGG - chr3_3:35790951-35790970 None:intergenic 45.0%
GTTTGTGTATGCAGGACAGT+GGG - chr3_3:35791009-35791028 None:intergenic 45.0%
AGTTTGTGTATGCAGGACAG+TGG - chr3_3:35791010-35791029 None:intergenic 45.0%
!! TTTCTGGTTGAGGTGCGAAT+GGG + chr3_3:35791088-35791107 Msa0450390:three_prime_UTR 45.0%
GCTCCATGACAAATGCCTTG+TGG - chr3_3:35788789-35788808 None:intergenic 50.0%
!! ACCGTGTTTGGTTTGGTGTC+AGG + chr3_3:35788940-35788959 Msa0450390:intron 50.0%
CCCTGACACCAAACCAAACA+CGG - chr3_3:35788944-35788963 None:intergenic 50.0%
!! CCGTGTTTGGTTTGGTGTCA+GGG + chr3_3:35788941-35788960 Msa0450390:intron 50.0%
!! GCAATTCTAAGGTGCCTCCA+TGG + chr3_3:35789082-35789101 Msa0450390:intron 50.0%
GCAAGTAGTGCTCACAAGCA+CGG - chr3_3:35789259-35789278 None:intergenic 50.0%
GAAGCAGGGCTAATTGGTTG+AGG + chr3_3:35789570-35789589 Msa0450390:CDS 50.0%
! AGGGCACCTAAAACCTCTGT+TGG + chr3_3:35789590-35789609 Msa0450390:CDS 50.0%
ACTCTCCTCAAGTCCAACAG+AGG - chr3_3:35789606-35789625 None:intergenic 50.0%
TCTGTTGGACTTGAGGAGAG+TGG + chr3_3:35789605-35789624 Msa0450390:CDS 50.0%
CTGTTGGACTTGAGGAGAGT+GGG + chr3_3:35789606-35789625 Msa0450390:CDS 50.0%
TGTTGGACTTGAGGAGAGTG+GGG + chr3_3:35789607-35789626 Msa0450390:CDS 50.0%
GGTAAAACCGTGGAAGTCGT+CGG - chr3_3:35789779-35789798 None:intergenic 50.0%
! GCTGGCATTGTCCCATTTTC+TGG + chr3_3:35789847-35789866 Msa0450390:CDS 50.0%
!! ATTGTCCCATTTTCTGGCCC+TGG + chr3_3:35789853-35789872 Msa0450390:CDS 50.0%
GTATCGTTATTGCGGCATCC+AGG - chr3_3:35789874-35789893 None:intergenic 50.0%
GTACAGAGGAACACTGCAGA+TGG - chr3_3:35790269-35790288 None:intergenic 50.0%
CATAGAGTGCACACAGACCA+CGG - chr3_3:35790390-35790409 None:intergenic 50.0%
GACAGTCCGATTGAAGCTTG+AGG - chr3_3:35790413-35790432 None:intergenic 50.0%
TTCGCACCTCAACCAGAAAG+AGG - chr3_3:35791087-35791106 None:intergenic 50.0%
!! CTTTCTGGTTGAGGTGCGAA+TGG + chr3_3:35791087-35791106 Msa0450390:three_prime_UTR 50.0%
CGCACCATACAAAAGGTCTG+GGG - chr3_3:35791297-35791316 None:intergenic 50.0%
CCGCACCATACAAAAGGTCT+GGG - chr3_3:35791298-35791317 None:intergenic 50.0%
! CCCAGACCTTTTGTATGGTG+CGG + chr3_3:35791295-35791314 Msa0450390:intron 50.0%
ACCGCACCATACAAAAGGTC+TGG - chr3_3:35791299-35791318 None:intergenic 50.0%
! AGACCTTTTGTATGGTGCGG+TGG + chr3_3:35791298-35791317 Msa0450390:intron 50.0%
! CTGTGTAGTTGTGGCTTGTG+AGG + chr3_3:35791476-35791495 Msa0450390:three_prime_UTR 50.0%
! TGTAGTTGTGGCTTGTGAGG+TGG + chr3_3:35791479-35791498 Msa0450390:three_prime_UTR 50.0%
AAAGCAAGGAGGCCCTACAC+TGG - chr3_3:35789483-35789502 None:intergenic 55.0%
TGGAAGACCGACGACTTCCA+CGG + chr3_3:35789769-35789788 Msa0450390:CDS 55.0%
GGCATCCAGGGCCAGAAAAT+GGG - chr3_3:35789861-35789880 None:intergenic 55.0%
CTGCAGTGTTCCTCTGTACC+TGG + chr3_3:35790270-35790289 Msa0450390:intron 55.0%
!! TGGGATTGGCCAGATCTCGT+TGG - chr3_3:35790777-35790796 None:intergenic 55.0%
TGTATGCAGGACAGTGGGAG+AGG - chr3_3:35791004-35791023 None:intergenic 55.0%
CCTCCACCGCACCATACAAA+AGG - chr3_3:35791304-35791323 None:intergenic 55.0%
! CCTTTTGTATGGTGCGGTGG+AGG + chr3_3:35791301-35791320 Msa0450390:intron 55.0%
GAGGAGATGATGCAAGCGCC+AGG + chr3_3:35788047-35788066 Msa0450390:five_prime_UTR 60.0%
CGGCATCCAGGGCCAGAAAA+TGG - chr3_3:35789862-35789881 None:intergenic 60.0%
TGCAGGACAGTGGGAGAGGT+GGG - chr3_3:35791000-35791019 None:intergenic 60.0%
ATGCAGGACAGTGGGAGAGG+TGG - chr3_3:35791001-35791020 None:intergenic 60.0%
GGTTGAGGTGCGAATGGGCA+AGG + chr3_3:35791093-35791112 Msa0450390:three_prime_UTR 60.0%
TGTATGGTGCGGTGGAGGTG+CGG + chr3_3:35791306-35791325 Msa0450390:intron 60.0%
GTGGGAGAGGTGGGACAGAC+AGG - chr3_3:35790991-35791010 None:intergenic 65.0%
! ATGGTGCGGTGGAGGTGCGG+TGG + chr3_3:35791309-35791328 Msa0450390:intron 70.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 35788019 35791518 35788019 ID=Msa0450390;Name=Msa0450390
chr3_3 mRNA 35788019 35791518 35788019 ID=Msa0450390-mRNA-1;Parent=Msa0450390;Name=Msa0450390-mRNA-1;_AED=0.07;_eAED=0.07;_QI=311|1|1|1|0.5|0.28|7|774|332
chr3_3 exon 35788019 35788265 35788019 ID=Msa0450390-mRNA-1:exon:6495;Parent=Msa0450390-mRNA-1
chr3_3 exon 35788384 35788397 35788384 ID=Msa0450390-mRNA-1:exon:6496;Parent=Msa0450390-mRNA-1
chr3_3 exon 35788496 35788572 35788496 ID=Msa0450390-mRNA-1:exon:6497;Parent=Msa0450390-mRNA-1
chr3_3 exon 35788767 35788900 35788767 ID=Msa0450390-mRNA-1:exon:6498;Parent=Msa0450390-mRNA-1
chr3_3 exon 35789484 35789906 35789484 ID=Msa0450390-mRNA-1:exon:6499;Parent=Msa0450390-mRNA-1
chr3_3 exon 35790276 35791268 35790276 ID=Msa0450390-mRNA-1:exon:6500;Parent=Msa0450390-mRNA-1
chr3_3 exon 35791323 35791518 35791323 ID=Msa0450390-mRNA-1:exon:6501;Parent=Msa0450390-mRNA-1
chr3_3 five_prime_UTR 35788019 35788265 35788019 ID=Msa0450390-mRNA-1:five_prime_utr;Parent=Msa0450390-mRNA-1
chr3_3 five_prime_UTR 35788384 35788397 35788384 ID=Msa0450390-mRNA-1:five_prime_utr;Parent=Msa0450390-mRNA-1
chr3_3 five_prime_UTR 35788496 35788545 35788496 ID=Msa0450390-mRNA-1:five_prime_utr;Parent=Msa0450390-mRNA-1
chr3_3 CDS 35788546 35788572 35788546 ID=Msa0450390-mRNA-1:cds;Parent=Msa0450390-mRNA-1
chr3_3 CDS 35788767 35788900 35788767 ID=Msa0450390-mRNA-1:cds;Parent=Msa0450390-mRNA-1
chr3_3 CDS 35789484 35789906 35789484 ID=Msa0450390-mRNA-1:cds;Parent=Msa0450390-mRNA-1
chr3_3 CDS 35790276 35790690 35790276 ID=Msa0450390-mRNA-1:cds;Parent=Msa0450390-mRNA-1
chr3_3 three_prime_UTR 35790691 35791268 35790691 ID=Msa0450390-mRNA-1:three_prime_utr;Parent=Msa0450390-mRNA-1
chr3_3 three_prime_UTR 35791323 35791518 35791323 ID=Msa0450390-mRNA-1:three_prime_utr;Parent=Msa0450390-mRNA-1
Gene Sequence

>Msa0450390

ATGGCCTTTGTAGCACATCAACCTCAGGGTTTGTATGTGACATCTTCCACAAGGCATTTGTCATGGAGCAAAAGGATGAAATTGAAGCAGTGTTTGACAAAACATCACATGATTGGAAGAACAGACTGGCATCACCTATTAAAGCAAAATATTTGTTTAAGTGTAGGGCCTCCTTGCTTTTGTGTTTCCAAGATCAAACCTTTGAGGATTTCATGCTTCAAAGGCAGAACTCAAAATGATAATTCAGGAAGCAGGGCTAATTGGTTGAGGGCACCTAAAACCTCTGTTGGACTTGAGGAGAGTGGGGACACTCACAACGTGCCATTCTCGTATGCATCTGAAGCAGGTGATAACCTTGCAACATCATCTGCTTTTCATGGACTCTTCAAAAAATGGCTGAAAATGTTGCGCACACAATCATCATGTCATGAAGTAGAGGGAATTTTTGGAAGACCGACGACTTCCACGGTTTTACCTGAAACTCTACAAATGACTCATAGTAAGGATGGAAGTGAGGTTTTGAAGCTGGCATTGTCCCATTTTCTGGCCCTGGATGCCGCAATAACGATACCTTTGTTGATATTTGTTCCTCTGTACCTGGCTGTTAATGTAAAATATGGTGCTGAAGTTTCAAAGGAACTAACTCCATTATGGGTTTTTGGGCCACTAATTGTGGCTTTACACATCATTATAATCCGTGGTCTGTGTGCACTCTATGCCTCAAGCTTCAATCGGACTGTCAAAATACTTAGGAAAGTACCTTCTTGGTGCATTTTGGCAAACTACTACATTTTTGGCGGCGGGCTCAAAGAAAAAATTGCAGTCTATCTTTTGCGGCCTATATCGAGCTTAAAAGACATTGATTATATACAGCTAACAAGAAGAATATTGAAAGTATTGAAGGAATGGTTAACGGACAAGTATCTTGATTATGTGGAATCAATATGGCCATATTATTGTCGGGCAATCAGATTTTTGAAGACATCTAATCTTATTTAA
Protein sequence

>Msa0450390

MAFVAHQPQGLYVTSSTRHLSWSKRMKLKQCLTKHHMIGRTDWHHLLKQNICLSVGPPCFCVSKIKPLRISCFKGRTQNDNSGSRANWLRAPKTSVGLEESGDTHNVPFSYASEAGDNLATSSAFHGLFKKWLKMLRTQSSCHEVEGIFGRPTTSTVLPETLQMTHSKDGSEVLKLALSHFLALDAAITIPLLIFVPLYLAVNVKYGAEVSKELTPLWVFGPLIVALHIIIIRGLCALYASSFNRTVKILRKVPSWCILANYYIFGGGLKEKIAVYLLRPISSLKDIDYIQLTRRILKVLKEWLTDKYLDYVESIWPYYCRAIRFLKTSNLI*