AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1068660


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1068660 MtrunA17_Chr7g0250541 93.893 393 7 2 1 391 1 378 0.0 711
Msa1068660 MtrunA17_Chr8g0335461 63.000 400 107 10 1 389 1 370 2.37e-112 333
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1068660 AT4G17520.1 46.117 412 146 11 1 389 1 359 2.61e-92 281
Msa1068660 AT4G16830.1 48.403 407 142 12 1 391 1 355 6.03e-61 201
Msa1068660 AT4G16830.2 60.262 229 71 5 164 391 56 265 2.30e-53 178
Msa1068660 AT5G47210.1 48.703 347 132 9 1 333 1 315 2.36e-53 181
Msa1068660 AT4G16830.3 59.825 229 72 5 164 391 136 345 8.80e-53 179
Msa1068660 AT5G47210.3 47.130 331 130 8 1 317 1 300 5.63e-45 157
Msa1068660 AT5G47210.2 43.431 274 114 6 1 261 1 246 4.51e-22 95.9

Find 165 sgRNAs with CRISPR-Local

Find 287 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACTGAAATCTTTGCTAAAT+TGG 0.161046 7_2:+63840733 Msa1068660:CDS
ACCGCGTCCTCCTTCATTTC+TGG 0.193263 7_2:-63839305 None:intergenic
GAATGAAGATGAAAAGAATT+TGG 0.259146 7_2:+63839933 Msa1068660:CDS
TCAACAAAGAAATACCTTCT+TGG 0.271936 7_2:-63840917 None:intergenic
AAGGTGCTGGAAGGGGTAAC+TGG 0.292242 7_2:+63839753 Msa1068660:CDS
ATAACTCAGGTGGGCGCGGC+AGG 0.304314 7_2:+63841518 Msa1068660:CDS
GTGGCGTTCAAATGTTCTTC+GGG 0.315882 7_2:-63839602 None:intergenic
AAAATCCAACGTTGGAGATT+AGG 0.323535 7_2:+63837709 Msa1068660:five_prime_UTR
CGTGGAGGTGACCGCGGATT+TGG 0.332778 7_2:+63839373 Msa1068660:CDS
GCAGGAGGGGTGGGCTTAGA+AGG 0.335295 7_2:-63838107 None:intergenic
CGGACATTTACCTTGTCTTC+AGG 0.339881 7_2:-63840036 None:intergenic
GGACGCGGTGGTCGTGGATT+TGG 0.345496 7_2:+63839319 Msa1068660:CDS
GGTGGGCGCGGCAGGGGACG+TGG 0.346207 7_2:+63841526 Msa1068660:CDS
CGAGGAGGTGACCGTGGGTT+TGG 0.347074 7_2:+63839346 Msa1068660:CDS
GACAATTCGTTCCCTGCCTC+TGG 0.379230 7_2:+63839442 Msa1068660:CDS
GAAAGGTGCTGTCAAGGAAC+AGG 0.384698 7_2:+63838058 Msa1068660:CDS
GGTCGTGGAGGTCGTGGTTT+CGG 0.384827 7_2:+63839400 Msa1068660:CDS
AAGTTTAACACACGAGCGTC+AGG 0.385303 7_2:-63837886 None:intergenic
TGTGGCGTTCAAATGTTCTT+CGG 0.385315 7_2:-63839603 None:intergenic
GATAGAGATCGGAGAGAGAA+GGG 0.395916 7_2:-63837821 None:intergenic
AACTCAGGTGGGCGCGGCAG+GGG 0.400573 7_2:+63841520 Msa1068660:CDS
AATGAAGATGAAAAGAATTT+GGG 0.402155 7_2:+63839934 Msa1068660:CDS
GGCAACAACGCAGGCTTGTT+AGG 0.403213 7_2:-63838086 None:intergenic
CTCTGGAGCCCCTGAAAACC+AGG 0.412435 7_2:+63839459 Msa1068660:CDS
CGCGGATTTGGTGGTGGTCG+TGG 0.419320 7_2:+63839385 Msa1068660:CDS
ATTGTCTTTCTTGCACGATA+AGG 0.419547 7_2:-63840711 None:intergenic
CCCGGGCATTTCCCTACCTT+GGG 0.419782 7_2:+63841667 Msa1068660:CDS
CGCCACAGTGGCACTGGGCG+AGG 0.422652 7_2:+63839619 Msa1068660:CDS
TTTGAACGCCACAGTGGCAC+TGG 0.427150 7_2:+63839613 Msa1068660:CDS
ACCAATCCATTTGATTTGCT+TGG 0.429081 7_2:+63837960 Msa1068660:CDS
TGCCAATGAAGCTGAAGAAA+AGG 0.431523 7_2:+63840011 Msa1068660:CDS
TCCCGGGCATTTCCCTACCT+TGG 0.433639 7_2:+63841666 Msa1068660:CDS
TAGTGGGATTCTCCTTCAGC+TGG 0.436928 7_2:-63841496 None:intergenic
TTCTCTCTCTCATTGCGGCT+AGG 0.437746 7_2:+63837777 Msa1068660:five_prime_UTR
GACCTATCTCCTTCTTCAAC+AGG 0.439208 7_2:-63839484 None:intergenic
TCTCTCTCTCATTGCGGCTA+GGG 0.441088 7_2:+63837778 Msa1068660:five_prime_UTR
AGATAGAGATCGGAGAGAGA+AGG 0.441274 7_2:-63837822 None:intergenic
GCAACATCAGTTTCAGCTGC+AGG 0.441395 7_2:-63839967 None:intergenic
TTTGTTCTAGGGAGCTGATA+AGG 0.443719 7_2:+63840858 Msa1068660:intron
TAAGCCCACCCCTCCTGCTC+AGG 0.444564 7_2:+63838112 Msa1068660:CDS
GAAGGAGGACGCGGTGGTCG+TGG 0.449410 7_2:+63839313 Msa1068660:CDS
GGCAGGGGACGTGGTGGCCG+TGG 0.451352 7_2:+63841535 Msa1068660:CDS
GACCGTGGGTTTGGTGGACG+TGG 0.453802 7_2:+63839355 Msa1068660:CDS
GATTTCAAGCGTGAAGGTGC+TGG 0.455572 7_2:+63839740 Msa1068660:CDS
ACAGCACCTTTCTTAGCAGC+AGG 0.463975 7_2:-63838047 None:intergenic
GGTACACGAGGAGGAGGAGG+AGG 0.464562 7_2:+63841556 Msa1068660:CDS
TCTAAAGACTGAAGAGAGAA+AGG 0.467642 7_2:+63840658 Msa1068660:CDS
GGGCGCGGCAGGGGACGTGG+TGG 0.473954 7_2:+63841529 Msa1068660:CDS
CACTATAACTCAGGTGGGCG+CGG 0.482966 7_2:+63841514 Msa1068660:CDS
AGGTGCTGGAAGGGGTAACT+GGG 0.486716 7_2:+63839754 Msa1068660:CDS
CCAGCCTGAGCAGGAGGGGT+GGG 0.487178 7_2:-63838116 None:intergenic
GGCCGTGGTACACGAGGAGG+AGG 0.488513 7_2:+63841550 Msa1068660:CDS
GTGAGGGAGTCCAGAAATGA+AGG 0.488997 7_2:+63839295 Msa1068660:intron
CCCACCCCTCCTGCTCAGGC+TGG 0.492831 7_2:+63838116 Msa1068660:CDS
CGTGGTACACGAGGAGGAGG+AGG 0.493384 7_2:+63841553 Msa1068660:CDS
GCTCCATCCATTGAAGATCC+CGG 0.493448 7_2:+63841649 Msa1068660:CDS
GGTGGTGGTCGTGGAGGTCG+TGG 0.494148 7_2:+63839394 Msa1068660:CDS
CGCGGTGGTCGTGGATTTGG+TGG 0.500708 7_2:+63839322 Msa1068660:CDS
GCTCCTCCTGCTGCTAAGAA+AGG 0.502941 7_2:+63838041 Msa1068660:CDS
TCATCACCAAGCAAATCAAA+TGG 0.503221 7_2:-63837966 None:intergenic
GAAATGCCCGGGATCTTCAA+TGG 0.504140 7_2:-63841656 None:intergenic
CTCCTTCTTCAACAGGACCC+TGG 0.505621 7_2:-63839477 None:intergenic
CGAGCGTCAGGGTTGAAACT+AGG 0.505698 7_2:-63837874 None:intergenic
CTCCATCCATTGAAGATCCC+GGG 0.514613 7_2:+63841650 Msa1068660:CDS
ACCAAGCAAATCAAATGGAT+TGG 0.515642 7_2:-63837961 None:intergenic
CAAGGAAGAGAAAGCCAAGA+AGG 0.520620 7_2:+63840903 Msa1068660:CDS
GGAGGTGACCGTGGGTTTGG+TGG 0.523532 7_2:+63839349 Msa1068660:CDS
TTCACTTGGCACCCAAGGTA+GGG 0.526649 7_2:-63841678 None:intergenic
TGTTGTTTCAAAGAAGAAGA+TGG 0.527109 7_2:+63837932 Msa1068660:exon
AGGGCTATCCTTGTTCCCTT+CGG 0.527296 7_2:-63839989 None:intergenic
TCAGCAACGATGAGCTGAGA+AGG 0.527576 7_2:-63837999 None:intergenic
AACCAGGGTCCTGTTGAAGA+AGG 0.528755 7_2:+63839475 Msa1068660:CDS
GTTCACTTGGCACCCAAGGT+AGG 0.529838 7_2:-63841679 None:intergenic
TTTCTTCAGCTTCATTGGCA+GGG 0.532201 7_2:-63840008 None:intergenic
CAAGCGTGAAGGTGCTGGAA+GGG 0.532787 7_2:+63839745 Msa1068660:CDS
CTTGCACGATAAGGCCTGCA+TGG 0.533336 7_2:-63840702 None:intergenic
GGAGGTGACCGCGGATTTGG+TGG 0.534801 7_2:+63839376 Msa1068660:CDS
GGAGGAGGAGGAGGTTTCCG+TGG 0.535610 7_2:+63841604 Msa1068660:CDS
ACCCAAGGTAGGGAAATGCC+CGG 0.536594 7_2:-63841668 None:intergenic
CATTGCTGTACGAATTTCCA+CGG 0.539202 7_2:-63841621 None:intergenic
CAAATCAAATGGATTGGTAG+TGG 0.541449 7_2:-63837955 None:intergenic
ACCAGCCTGAGCAGGAGGGG+TGG 0.542144 7_2:-63838117 None:intergenic
GGAGGAATATGAGAAAGTGC+TGG 0.543378 7_2:+63840610 Msa1068660:CDS
GGTTTCAACAATGGTGATGC+TGG 0.543510 7_2:+63839565 Msa1068660:CDS
AGTAACTAACCAGCCTGAGC+AGG 0.543544 7_2:-63838125 None:intergenic
TTTCAGGGGCTCCAGAGGCA+GGG 0.547403 7_2:-63839453 None:intergenic
TGCTAAGAAAGGTGCTGTCA+AGG 0.548413 7_2:+63838052 Msa1068660:CDS
GGTGACCGCGGATTTGGTGG+TGG 0.550256 7_2:+63839379 Msa1068660:CDS
TGCCCGGGATCTTCAATGGA+TGG 0.552833 7_2:-63841652 None:intergenic
AACTAACCAGCCTGAGCAGG+AGG 0.555781 7_2:-63838122 None:intergenic
GCCACAGTGGCACTGGGCGA+GGG 0.557182 7_2:+63839620 Msa1068660:CDS
ATGCGCGAAAAGGGTTCACT+TGG 0.557544 7_2:-63841692 None:intergenic
TGATGTTGCCGAAGGGAACA+AGG 0.558851 7_2:+63839981 Msa1068660:CDS
AAGCGTGAAGGTGCTGGAAG+GGG 0.559364 7_2:+63839746 Msa1068660:CDS
GGAGAATCCCACTATAACTC+AGG 0.564061 7_2:+63841505 Msa1068660:CDS
GGATCTTCAATGGATGGAGC+AGG 0.564280 7_2:-63841646 None:intergenic
CTAACCAGCCTGAGCAGGAG+GGG 0.565343 7_2:-63838120 None:intergenic
GGTGGACGAGGAGGTGACCG+TGG 0.565956 7_2:+63839340 Msa1068660:CDS
CGTGGTGGCCGTGGTACACG+AGG 0.566001 7_2:+63841544 Msa1068660:CDS
AAGGGTTCACTTGGCACCCA+AGG 0.569458 7_2:-63841683 None:intergenic
TGGTTATTAGGAAATGACTC+TGG 0.572820 7_2:+63840589 Msa1068660:intron
GGCAACCTAATCTCCAACGT+TGG 0.574091 7_2:-63837714 None:intergenic
GGTCGTGGATTTGGTGGACG+AGG 0.574276 7_2:+63839328 Msa1068660:CDS
AATGGTGATGCTGGTGAAGA+GGG 0.574768 7_2:+63839574 Msa1068660:CDS
TCCAGAAATGAAGGAGGACG+CGG 0.577100 7_2:+63839304 Msa1068660:CDS
TGTCATCATTTGAGTAGTCA+CGG 0.582804 7_2:-63839423 None:intergenic
TCCTCAGAAAGACGTAGCTA+TGG 0.583882 7_2:+63839505 Msa1068660:CDS
GAGTTTCTGAAGCCAGCTGA+AGG 0.586502 7_2:+63841484 Msa1068660:CDS
TTGAACGCCACAGTGGCACT+GGG 0.588094 7_2:+63839614 Msa1068660:CDS
GTCCTGTTGAAGAAGGAGAT+AGG 0.590241 7_2:+63839482 Msa1068660:CDS
TCAAGCGTGAAGGTGCTGGA+AGG 0.590971 7_2:+63839744 Msa1068660:CDS
CTATCTTCTCCTTCGTACGA+TGG 0.593032 7_2:+63837839 Msa1068660:five_prime_UTR
ACGAAGGAGAAGATAGAGAT+CGG 0.593463 7_2:-63837832 None:intergenic
CCCAAGGTAGGGAAATGCCC+GGG 0.593676 7_2:-63841667 None:intergenic
TCCACGACGACCTCCGCGGT+AGG 0.597333 7_2:-63839542 None:intergenic
TCAGAAAGACGTAGCTATGG+TGG 0.597415 7_2:+63839508 Msa1068660:CDS
AGTGCTGGAAGAGAAAAGAA+AGG 0.598692 7_2:+63840625 Msa1068660:CDS
TGGCGTTCAAATGTTCTTCG+GGG 0.599479 7_2:-63839601 None:intergenic
GAATCCCACTATAACTCAGG+TGG 0.602838 7_2:+63841508 Msa1068660:CDS
CAATGGTGATGCTGGTGAAG+AGG 0.603465 7_2:+63839573 Msa1068660:CDS
CTCCTCCTCCTCGTGTACCA+CGG 0.603887 7_2:-63841552 None:intergenic
GTGGACGAGGAGGTGACCGT+GGG 0.604172 7_2:+63839341 Msa1068660:CDS
CCCTACCGCGGAGGTCGTCG+TGG 0.605182 7_2:+63839541 Msa1068660:CDS
CTCCACGTCCACCAAACCCA+CGG 0.606495 7_2:-63839357 None:intergenic
CAGCAACGATGAGCTGAGAA+GGG 0.614728 7_2:-63837998 None:intergenic
GGCTTAGAAGGCAACAACGC+AGG 0.615074 7_2:-63838095 None:intergenic
CGTGGGTTTGGTGGACGTGG+AGG 0.619035 7_2:+63839358 Msa1068660:CDS
AGAAAAGGAGCCTGAAGACA+AGG 0.621218 7_2:+63840026 Msa1068660:CDS
TAAAGCATTTGAAACCATGC+AGG 0.622156 7_2:+63840688 Msa1068660:CDS
CGTCGTGGAGGTTTCAACAA+TGG 0.622285 7_2:+63839556 Msa1068660:CDS
CGTGGATTTGGTGGACGAGG+AGG 0.623293 7_2:+63839331 Msa1068660:CDS
GCACCTTTCTTAGCAGCAGG+AGG 0.627026 7_2:-63838044 None:intergenic
GGTGGACGTGGAGGTGACCG+CGG 0.632941 7_2:+63839367 Msa1068660:CDS
TCTCTTTCTCTCTCTCATTG+CGG 0.633265 7_2:+63837772 Msa1068660:five_prime_UTR
CTGAAACTGATGTTGCCGAA+GGG 0.636057 7_2:+63839974 Msa1068660:CDS
AAAGGTGCTGTCAAGGAACA+GGG 0.636405 7_2:+63838059 Msa1068660:CDS
AGTTTAACACACGAGCGTCA+GGG 0.638165 7_2:-63837885 None:intergenic
ACTAACCAGCCTGAGCAGGA+GGG 0.639448 7_2:-63838121 None:intergenic
TTATTAGGAAATGACTCTGG+AGG 0.640664 7_2:+63840592 Msa1068660:intron
AGGGAGTCCAGAAATGAAGG+AGG 0.644058 7_2:+63839298 Msa1068660:CDS
AAATAAATAAAATCCAACGT+TGG 0.648552 7_2:+63837701 Msa1068660:five_prime_UTR
ACCATAGCTACGTCTTTCTG+AGG 0.648642 7_2:-63839506 None:intergenic
ACCCTCGCCCAGTGCCACTG+TGG 0.651721 7_2:-63839621 None:intergenic
CACGACCACCACCAAATCCG+CGG 0.653393 7_2:-63839384 None:intergenic
AATCCCACTATAACTCAGGT+GGG 0.655235 7_2:+63841509 Msa1068660:CDS
GCTGAAACTGATGTTGCCGA+AGG 0.656153 7_2:+63839973 Msa1068660:CDS
TACCGCGGAGGTCGTCGTGG+AGG 0.657139 7_2:+63839544 Msa1068660:CDS
TCTGGAGCCCCTGAAAACCA+GGG 0.658814 7_2:+63839460 Msa1068660:CDS
AGAAACGATTTCAAGCGTGA+AGG 0.659209 7_2:+63839734 Msa1068660:intron
GGATTTGGTGGTGGTCGTGG+AGG 0.659837 7_2:+63839388 Msa1068660:CDS
AGAAATGAAGGAGGACGCGG+TGG 0.665174 7_2:+63839307 Msa1068660:CDS
GCGCAAAGAGGCTTATGACA+AGG 0.666794 7_2:+63840885 Msa1068660:CDS
GGTGCTGGAAGGGGTAACTG+GGG 0.673151 7_2:+63839755 Msa1068660:CDS
CCACGAGGTCCCTACCGCGG+AGG 0.677303 7_2:+63839532 Msa1068660:CDS
TGATAAGGATAAGCGCAAAG+AGG 0.681220 7_2:+63840873 Msa1068660:CDS
CTTAACTTAAGCGAACACAT+AGG 0.681223 7_2:+63837674 None:intergenic
TTTGCTTGGTGATGACGCTG+AGG 0.688473 7_2:+63837974 Msa1068660:CDS
GGACCACGAGGTCCCTACCG+CGG 0.694021 7_2:+63839529 Msa1068660:CDS
GGTGGCCGTGGTACACGAGG+AGG 0.702691 7_2:+63841547 Msa1068660:CDS
TGAAGTGAGAGAGAAATGCA+CGG 0.714734 7_2:-63837735 None:intergenic
GCATAGTTACCATCGTACGA+AGG 0.715688 7_2:-63837848 None:intergenic
CGTAGCTATGGTGGACCACG+AGG 0.724280 7_2:+63839517 Msa1068660:CDS
AACCTCCACGACGACCTCCG+CGG 0.738924 7_2:-63839546 None:intergenic
AGAACATTTGAACGCCACAG+TGG 0.751248 7_2:+63839607 Msa1068660:CDS
ACAGCAAAGACAATAACACG+CGG 0.802882 7_2:-63837912 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACAAAATAAATTCAAAATTA+TGG - chr7_2:63840174-63840193 None:intergenic 10.0%
!!! AATTGTAAATAATCTGTTTT+AGG + chr7_2:63838681-63838700 Msa1068660:intron 15.0%
!! AAGATAAAATAACAATGAAT+TGG + chr7_2:63838781-63838800 Msa1068660:intron 15.0%
!! TTTGTTTACATGTTTATTAT+AGG + chr7_2:63839827-63839846 Msa1068660:intron 15.0%
!!! AATTTTGAATTTATTTTGTC+TGG + chr7_2:63840175-63840194 Msa1068660:intron 15.0%
!!! TTCTTCTGATTTAATTTATT+TGG + chr7_2:63840527-63840546 Msa1068660:intron 15.0%
!!! ATGATTTTTATTTTACTAAC+TGG + chr7_2:63841428-63841447 Msa1068660:intron 15.0%
!!! ACGTTGGATTTTATTTATTT+GGG - chr7_2:63837701-63837720 None:intergenic 20.0%
!!! AACGTTGGATTTTATTTATT+TGG - chr7_2:63837702-63837721 None:intergenic 20.0%
!! AAATAAATAAAATCCAACGT+TGG + chr7_2:63837701-63837720 Msa1068660:five_prime_UTR 20.0%
!! TAATATAATATCAGAATCCA+CGG - chr7_2:63838159-63838178 None:intergenic 20.0%
!! TGGATTCTGATATTATATTA+GGG + chr7_2:63838159-63838178 Msa1068660:intron 20.0%
!! TAGGTCATTTATAATAAATC+TGG + chr7_2:63838326-63838345 Msa1068660:intron 20.0%
!!! AAAGAACCTTGTTATATAAA+TGG - chr7_2:63839181-63839200 None:intergenic 20.0%
!! AAACAAATCATATCATCATA+TGG - chr7_2:63839659-63839678 None:intergenic 20.0%
!!! TTTTCATATTTATTTGCTTG+TGG + chr7_2:63839876-63839895 Msa1068660:intron 20.0%
!! AATGAAGATGAAAAGAATTT+GGG + chr7_2:63839934-63839953 Msa1068660:CDS 20.0%
!!! CTATTGTATAACTATTGATT+AGG - chr7_2:63840787-63840806 None:intergenic 20.0%
!! CAATAGTTATTTATGTTGTA+TGG + chr7_2:63840801-63840820 Msa1068660:intron 20.0%
!! TTATACATACAAAGTAACAA+GGG - chr7_2:63840952-63840971 None:intergenic 20.0%
!!! AGGTAAACCATAATTTTTTT+TGG + chr7_2:63841278-63841297 Msa1068660:intron 20.0%
!!! AAAGCATCCAAAAAAAATTA+TGG - chr7_2:63841288-63841307 None:intergenic 20.0%
!! AACTATCAAAAATCATACAA+TGG - chr7_2:63841383-63841402 None:intergenic 20.0%
!!! TGTATGATTTTTGATAGTTT+TGG + chr7_2:63841384-63841403 Msa1068660:intron 20.0%
!!! GTTTTGGAATGTAATTTTTT+TGG + chr7_2:63841400-63841419 Msa1068660:intron 20.0%
! GTGGATTCTGATATTATATT+AGG + chr7_2:63838158-63838177 Msa1068660:intron 25.0%
!!! ATCTTTTGATTTGTTGTTGT+TGG + chr7_2:63838242-63838261 Msa1068660:intron 25.0%
!!! TCTATCTTTGATGTTTTTGT+AGG + chr7_2:63838307-63838326 Msa1068660:intron 25.0%
! CTACAAGTTTAGACAATAAT+TGG + chr7_2:63838485-63838504 Msa1068660:intron 25.0%
!! TATGAAGTCATAATTTTCTG+TGG + chr7_2:63838967-63838986 Msa1068660:intron 25.0%
! GTTGTTAAATACAATTTCGA+TGG + chr7_2:63839022-63839041 Msa1068660:intron 25.0%
! TGTTGTCCATTTATATAACA+AGG + chr7_2:63839172-63839191 Msa1068660:intron 25.0%
!!! ATGTTTTATTTTGACAGTGA+GGG + chr7_2:63839279-63839298 Msa1068660:intron 25.0%
! TTGTGGTTTATAATTTACTC+AGG + chr7_2:63839893-63839912 Msa1068660:intron 25.0%
! TGTGGTTTATAATTTACTCA+GGG + chr7_2:63839894-63839913 Msa1068660:intron 25.0%
! GAATGAAGATGAAAAGAATT+TGG + chr7_2:63839933-63839952 Msa1068660:CDS 25.0%
! TACTGAAATCTTTGCTAAAT+TGG + chr7_2:63840733-63840752 Msa1068660:CDS 25.0%
! GTTATACATACAAAGTAACA+AGG - chr7_2:63840953-63840972 None:intergenic 25.0%
! TTGTATGTATAACAACTTCA+TGG + chr7_2:63840960-63840979 Msa1068660:intron 25.0%
! AAACGAGTAAAAAAGAATCA+TGG - chr7_2:63841170-63841189 None:intergenic 25.0%
!! TGTTGTTTCAAAGAAGAAGA+TGG + chr7_2:63837932-63837951 Msa1068660:exon 30.0%
TCATAGTCAATAAGCATGTT+TGG - chr7_2:63838952-63838971 None:intergenic 30.0%
!!! GTTGGTTTCTTACTTTTTGT+TGG + chr7_2:63838996-63839015 Msa1068660:intron 30.0%
AAACACAAATTTCAACTGAC+TGG - chr7_2:63839096-63839115 None:intergenic 30.0%
!!! ATGCTGTACTGTTTTTTGAA+TGG + chr7_2:63839203-63839222 Msa1068660:intron 30.0%
!!! GATGTTTTATTTTGACAGTG+AGG + chr7_2:63839278-63839297 Msa1068660:intron 30.0%
CAAATAATCGCATGATTGTT+TGG - chr7_2:63840122-63840141 None:intergenic 30.0%
AACTTTCAGACACTTGAAAA+AGG - chr7_2:63840370-63840389 None:intergenic 30.0%
! ACTTAAGCATTGCATATCTT+TGG + chr7_2:63840409-63840428 Msa1068660:intron 30.0%
!! TAACCTTGTTGTTTCTTATG+AGG + chr7_2:63840432-63840451 Msa1068660:intron 30.0%
! AAATCAGAAGAAAGTACGAT+TGG - chr7_2:63840519-63840538 None:intergenic 30.0%
TCAACAAAGAAATACCTTCT+TGG - chr7_2:63840920-63840939 None:intergenic 30.0%
AAAACACCATTGTTCCATAT+AGG + chr7_2:63841055-63841074 Msa1068660:intron 30.0%
AAACACCATTGTTCCATATA+GGG + chr7_2:63841056-63841075 Msa1068660:intron 30.0%
GTGCTTGCTTAATTATTATC+TGG + chr7_2:63841325-63841344 Msa1068660:intron 30.0%
TAATTATTATCTGGCATCTC+TGG + chr7_2:63841334-63841353 Msa1068660:intron 30.0%
AAAATCCAACGTTGGAGATT+AGG + chr7_2:63837709-63837728 Msa1068660:five_prime_UTR 35.0%
!! CAAATCAAATGGATTGGTAG+TGG - chr7_2:63837958-63837977 None:intergenic 35.0%
!! ACCAATCCATTTGATTTGCT+TGG + chr7_2:63837960-63837979 Msa1068660:CDS 35.0%
ACCAAGCAAATCAAATGGAT+TGG - chr7_2:63837964-63837983 None:intergenic 35.0%
TCATCACCAAGCAAATCAAA+TGG - chr7_2:63837969-63837988 None:intergenic 35.0%
!! TTAGTTACTGTTTTGTTCCG+TGG + chr7_2:63838139-63838158 Msa1068660:intron 35.0%
GTGTGATTGATAGAACACTA+TGG + chr7_2:63838528-63838547 Msa1068660:intron 35.0%
!! AATCTGTTTTAGGTCCTGTT+TGG + chr7_2:63838691-63838710 Msa1068660:intron 35.0%
AAGAAGCTGTTTATCCAAAC+AGG - chr7_2:63838708-63838727 None:intergenic 35.0%
ATAGCACAAGCGTTTATCAT+AGG + chr7_2:63838737-63838756 Msa1068660:intron 35.0%
GTCAATAAGCATGTTTGGAT+TGG - chr7_2:63838947-63838966 None:intergenic 35.0%
!! AATTTTCTGTGGTTAGCTGT+TGG + chr7_2:63838978-63838997 Msa1068660:intron 35.0%
TGTCATCATTTGAGTAGTCA+CGG - chr7_2:63839426-63839445 None:intergenic 35.0%
! TGGTTGGTCATTTAAACAGT+AGG - chr7_2:63840102-63840121 None:intergenic 35.0%
TAATCGCATGATTGTTTGGT+TGG - chr7_2:63840118-63840137 None:intergenic 35.0%
GCAAAGAAGACACTTGAAAA+TGG - chr7_2:63840211-63840230 None:intergenic 35.0%
GTTGTTGCATTCTCTAAGTT+TGG + chr7_2:63840232-63840251 Msa1068660:intron 35.0%
TGAAAAAGGTGAAGCAATAC+TGG - chr7_2:63840356-63840375 None:intergenic 35.0%
!!! CTGTTTTTGTTGTTGCTGAT+TGG + chr7_2:63840569-63840588 Msa1068660:intron 35.0%
! GTTGTTGCTGATTGGTTATT+AGG + chr7_2:63840577-63840596 Msa1068660:intron 35.0%
TGGTTATTAGGAAATGACTC+TGG + chr7_2:63840589-63840608 Msa1068660:intron 35.0%
TTATTAGGAAATGACTCTGG+AGG + chr7_2:63840592-63840611 Msa1068660:intron 35.0%
TCTAAAGACTGAAGAGAGAA+AGG + chr7_2:63840658-63840677 Msa1068660:CDS 35.0%
! TAAAGCATTTGAAACCATGC+AGG + chr7_2:63840688-63840707 Msa1068660:CDS 35.0%
ATTGTCTTTCTTGCACGATA+AGG - chr7_2:63840714-63840733 None:intergenic 35.0%
TGCACTTCTATCTTTGTTCT+AGG + chr7_2:63840846-63840865 Msa1068660:intron 35.0%
GCACTTCTATCTTTGTTCTA+GGG + chr7_2:63840847-63840866 Msa1068660:intron 35.0%
TTGTCAAATAGCGACTATAG+TGG + chr7_2:63841004-63841023 Msa1068660:intron 35.0%
TGTCAAATAGCGACTATAGT+GGG + chr7_2:63841005-63841024 Msa1068660:intron 35.0%
CCATATTCTGCTACGTTATA+AGG - chr7_2:63841031-63841050 None:intergenic 35.0%
CCTTATAACGTAGCAGAATA+TGG + chr7_2:63841028-63841047 Msa1068660:intron 35.0%
ATATAGGGTGCAAGTACATA+GGG + chr7_2:63841071-63841090 Msa1068660:intron 35.0%
TGAAGTGAGAGAGAAATGCA+CGG - chr7_2:63837738-63837757 None:intergenic 40.0%
TCTCTTTCTCTCTCTCATTG+CGG + chr7_2:63837772-63837791 Msa1068660:five_prime_UTR 40.0%
ACGAAGGAGAAGATAGAGAT+CGG - chr7_2:63837835-63837854 None:intergenic 40.0%
ACAGCAAAGACAATAACACG+CGG - chr7_2:63837915-63837934 None:intergenic 40.0%
ATGTAGCAACCCCAGTTAAT+GGG + chr7_2:63838564-63838583 Msa1068660:intron 40.0%
! AAGCCTTATCCCATTAACTG+GGG - chr7_2:63838576-63838595 None:intergenic 40.0%
! CAAGCCTTATCCCATTAACT+GGG - chr7_2:63838577-63838596 None:intergenic 40.0%
ATGCATGTTGAGAAGAACAG+AGG + chr7_2:63838635-63838654 Msa1068660:intron 40.0%
TGCATGTTGAGAAGAACAGA+GGG + chr7_2:63838636-63838655 Msa1068660:intron 40.0%
GCTTATTTCAGCTTGTCTAC+GGG - chr7_2:63838925-63838944 None:intergenic 40.0%
GGCTTATTTCAGCTTGTCTA+CGG - chr7_2:63838926-63838945 None:intergenic 40.0%
CAAATTTCAACTGACTGGAC+TGG - chr7_2:63839091-63839110 None:intergenic 40.0%
TGTGGCGTTCAAATGTTCTT+CGG - chr7_2:63839606-63839625 None:intergenic 40.0%
AGAAACGATTTCAAGCGTGA+AGG + chr7_2:63839734-63839753 Msa1068660:intron 40.0%
TTTCTTCAGCTTCATTGGCA+GGG - chr7_2:63840011-63840030 None:intergenic 40.0%
! TTTTCTTCAGCTTCATTGGC+AGG - chr7_2:63840012-63840031 None:intergenic 40.0%
TGCCAATGAAGCTGAAGAAA+AGG + chr7_2:63840011-63840030 Msa1068660:CDS 40.0%
! CTCCTTTTCTTCAGCTTCAT+TGG - chr7_2:63840016-63840035 None:intergenic 40.0%
ACTGTTGCATTCTCCAAGTT+TGG + chr7_2:63840070-63840089 Msa1068660:intron 40.0%
CAGTAGGAAAACACCAAACT+TGG - chr7_2:63840086-63840105 None:intergenic 40.0%
GCACCTCATAAGAAACAACA+AGG - chr7_2:63840438-63840457 None:intergenic 40.0%
TGTTTCTTATGAGGTGCACT+TGG + chr7_2:63840441-63840460 Msa1068660:intron 40.0%
GTGCACTTGGTTATTTGCAA+AGG + chr7_2:63840454-63840473 Msa1068660:intron 40.0%
! AGTGCTGGAAGAGAAAAGAA+AGG + chr7_2:63840625-63840644 Msa1068660:CDS 40.0%
!! TTTGTTCTAGGGAGCTGATA+AGG + chr7_2:63840858-63840877 Msa1068660:intron 40.0%
TGATAAGGATAAGCGCAAAG+AGG + chr7_2:63840873-63840892 Msa1068660:CDS 40.0%
TTGCACCCTATATGGAACAA+TGG - chr7_2:63841064-63841083 None:intergenic 40.0%
CTATGTACTTGCACCCTATA+TGG - chr7_2:63841072-63841091 None:intergenic 40.0%
CATATAGGGTGCAAGTACAT+AGG + chr7_2:63841070-63841089 Msa1068660:intron 40.0%
TCTAGTAACCATTGCCTTCT+TGG + chr7_2:63841253-63841272 Msa1068660:intron 40.0%
CTAGTAACCATTGCCTTCTT+GGG + chr7_2:63841254-63841273 Msa1068660:intron 40.0%
TATGGTTTACCTTCCCAAGA+AGG - chr7_2:63841270-63841289 None:intergenic 40.0%
AATCCCACTATAACTCAGGT+GGG + chr7_2:63841509-63841528 Msa1068660:CDS 40.0%
CATTGCTGTACGAATTTCCA+CGG - chr7_2:63841624-63841643 None:intergenic 40.0%
GATAGAGATCGGAGAGAGAA+GGG - chr7_2:63837824-63837843 None:intergenic 45.0%
AGATAGAGATCGGAGAGAGA+AGG - chr7_2:63837825-63837844 None:intergenic 45.0%
CTATCTTCTCCTTCGTACGA+TGG + chr7_2:63837839-63837858 Msa1068660:five_prime_UTR 45.0%
GCATAGTTACCATCGTACGA+AGG - chr7_2:63837851-63837870 None:intergenic 45.0%
AGTTTAACACACGAGCGTCA+GGG - chr7_2:63837888-63837907 None:intergenic 45.0%
AAGTTTAACACACGAGCGTC+AGG - chr7_2:63837889-63837908 None:intergenic 45.0%
!! TGCTAAGAAAGGTGCTGTCA+AGG + chr7_2:63838052-63838071 Msa1068660:CDS 45.0%
!! AAAGGTGCTGTCAAGGAACA+GGG + chr7_2:63838059-63838078 Msa1068660:CDS 45.0%
CATGTAGCAACCCCAGTTAA+TGG + chr7_2:63838563-63838582 Msa1068660:intron 45.0%
CAACCCCAGTTAATGGGATA+AGG + chr7_2:63838570-63838589 Msa1068660:intron 45.0%
! CCAAGCCTTATCCCATTAAC+TGG - chr7_2:63838578-63838597 None:intergenic 45.0%
CCAGTTAATGGGATAAGGCT+TGG + chr7_2:63838575-63838594 Msa1068660:intron 45.0%
! TGAGCATTTTGTTCTGTGCG+TGG + chr7_2:63839139-63839158 Msa1068660:intron 45.0%
GTCCTGTTGAAGAAGGAGAT+AGG + chr7_2:63839482-63839501 Msa1068660:CDS 45.0%
GACCTATCTCCTTCTTCAAC+AGG - chr7_2:63839487-63839506 None:intergenic 45.0%
TCCTCAGAAAGACGTAGCTA+TGG + chr7_2:63839505-63839524 Msa1068660:CDS 45.0%
ACCATAGCTACGTCTTTCTG+AGG - chr7_2:63839509-63839528 None:intergenic 45.0%
TCAGAAAGACGTAGCTATGG+TGG + chr7_2:63839508-63839527 Msa1068660:CDS 45.0%
! GGTTTCAACAATGGTGATGC+TGG + chr7_2:63839565-63839584 Msa1068660:CDS 45.0%
! AATGGTGATGCTGGTGAAGA+GGG + chr7_2:63839574-63839593 Msa1068660:CDS 45.0%
TGGCGTTCAAATGTTCTTCG+GGG - chr7_2:63839604-63839623 None:intergenic 45.0%
GTGGCGTTCAAATGTTCTTC+GGG - chr7_2:63839605-63839624 None:intergenic 45.0%
AGAACATTTGAACGCCACAG+TGG + chr7_2:63839607-63839626 Msa1068660:CDS 45.0%
CTGAAACTGATGTTGCCGAA+GGG + chr7_2:63839974-63839993 Msa1068660:CDS 45.0%
AGAAAAGGAGCCTGAAGACA+AGG + chr7_2:63840026-63840045 Msa1068660:CDS 45.0%
CGGACATTTACCTTGTCTTC+AGG - chr7_2:63840039-63840058 None:intergenic 45.0%
TGCAACAGTACGAATGGAGA+CGG - chr7_2:63840059-63840078 None:intergenic 45.0%
GGAGAATGCAACAGTACGAA+TGG - chr7_2:63840065-63840084 None:intergenic 45.0%
! GGAGGAATATGAGAAAGTGC+TGG + chr7_2:63840610-63840629 Msa1068660:CDS 45.0%
CAAGGAAGAGAAAGCCAAGA+AGG + chr7_2:63840903-63840922 Msa1068660:CDS 45.0%
! CTCGTTTTGTGTGACGATCA+AGG + chr7_2:63841183-63841202 Msa1068660:intron 45.0%
TAACCATTGCCTTCTTGGGA+AGG + chr7_2:63841258-63841277 Msa1068660:intron 45.0%
TTACCTTCCCAAGAAGGCAA+TGG - chr7_2:63841264-63841283 None:intergenic 45.0%
GGAGAATCCCACTATAACTC+AGG + chr7_2:63841505-63841524 Msa1068660:CDS 45.0%
GAATCCCACTATAACTCAGG+TGG + chr7_2:63841508-63841527 Msa1068660:CDS 45.0%
GGCAACCTAATCTCCAACGT+TGG - chr7_2:63837717-63837736 None:intergenic 50.0%
TTCTCTCTCTCATTGCGGCT+AGG + chr7_2:63837777-63837796 Msa1068660:five_prime_UTR 50.0%
TCTCTCTCTCATTGCGGCTA+GGG + chr7_2:63837778-63837797 Msa1068660:five_prime_UTR 50.0%
!! TTTGCTTGGTGATGACGCTG+AGG + chr7_2:63837974-63837993 Msa1068660:CDS 50.0%
CAGCAACGATGAGCTGAGAA+GGG - chr7_2:63838001-63838020 None:intergenic 50.0%
TCAGCAACGATGAGCTGAGA+AGG - chr7_2:63838002-63838021 None:intergenic 50.0%
ACAGCACCTTTCTTAGCAGC+AGG - chr7_2:63838050-63838069 None:intergenic 50.0%
!! GAAAGGTGCTGTCAAGGAAC+AGG + chr7_2:63838058-63838077 Msa1068660:CDS 50.0%
AGTAACTAACCAGCCTGAGC+AGG - chr7_2:63838128-63838147 None:intergenic 50.0%
TGAGAAGAACAGAGGGCTAG+TGG + chr7_2:63838643-63838662 Msa1068660:intron 50.0%
GTGAGGGAGTCCAGAAATGA+AGG + chr7_2:63839295-63839314 Msa1068660:intron 50.0%
AGGGAGTCCAGAAATGAAGG+AGG + chr7_2:63839298-63839317 Msa1068660:CDS 50.0%
TCCAGAAATGAAGGAGGACG+CGG + chr7_2:63839304-63839323 Msa1068660:CDS 50.0%
!! AACAGGACCCTGGTTTTCAG+GGG - chr7_2:63839470-63839489 None:intergenic 50.0%
!! CAACAGGACCCTGGTTTTCA+GGG - chr7_2:63839471-63839490 None:intergenic 50.0%
!! TCAACAGGACCCTGGTTTTC+AGG - chr7_2:63839472-63839491 None:intergenic 50.0%
AACCAGGGTCCTGTTGAAGA+AGG + chr7_2:63839475-63839494 Msa1068660:CDS 50.0%
CGTCGTGGAGGTTTCAACAA+TGG + chr7_2:63839556-63839575 Msa1068660:CDS 50.0%
! CAATGGTGATGCTGGTGAAG+AGG + chr7_2:63839573-63839592 Msa1068660:CDS 50.0%
! GATTTCAAGCGTGAAGGTGC+TGG + chr7_2:63839740-63839759 Msa1068660:CDS 50.0%
GCAACATCAGTTTCAGCTGC+AGG - chr7_2:63839970-63839989 None:intergenic 50.0%
GCTGAAACTGATGTTGCCGA+AGG + chr7_2:63839973-63839992 Msa1068660:CDS 50.0%
TGATGTTGCCGAAGGGAACA+AGG + chr7_2:63839981-63840000 Msa1068660:CDS 50.0%
AGGGCTATCCTTGTTCCCTT+CGG - chr7_2:63839992-63840011 None:intergenic 50.0%
GGACACAGAGCACAGAGAAA+TGG - chr7_2:63840498-63840517 None:intergenic 50.0%
GCGCAAAGAGGCTTATGACA+AGG + chr7_2:63840885-63840904 Msa1068660:CDS 50.0%
!! GAGTTTCTGAAGCCAGCTGA+AGG + chr7_2:63841484-63841503 Msa1068660:CDS 50.0%
TAGTGGGATTCTCCTTCAGC+TGG - chr7_2:63841499-63841518 None:intergenic 50.0%
GGATCTTCAATGGATGGAGC+AGG - chr7_2:63841649-63841668 None:intergenic 50.0%
GCTCCATCCATTGAAGATCC+CGG + chr7_2:63841649-63841668 Msa1068660:CDS 50.0%
CTCCATCCATTGAAGATCCC+GGG + chr7_2:63841650-63841669 Msa1068660:CDS 50.0%
GAAATGCCCGGGATCTTCAA+TGG - chr7_2:63841659-63841678 None:intergenic 50.0%
CGAGCGTCAGGGTTGAAACT+AGG - chr7_2:63837877-63837896 None:intergenic 55.0%
GCTCCTCCTGCTGCTAAGAA+AGG + chr7_2:63838041-63838060 Msa1068660:CDS 55.0%
GCACCTTTCTTAGCAGCAGG+AGG - chr7_2:63838047-63838066 None:intergenic 55.0%
! GGCAACAACGCAGGCTTGTT+AGG - chr7_2:63838089-63838108 None:intergenic 55.0%
GGCTTAGAAGGCAACAACGC+AGG - chr7_2:63838098-63838117 None:intergenic 55.0%
ACTAACCAGCCTGAGCAGGA+GGG - chr7_2:63838124-63838143 None:intergenic 55.0%
AACTAACCAGCCTGAGCAGG+AGG - chr7_2:63838125-63838144 None:intergenic 55.0%
ACCGCGTCCTCCTTCATTTC+TGG - chr7_2:63839308-63839327 None:intergenic 55.0%
AGAAATGAAGGAGGACGCGG+TGG + chr7_2:63839307-63839326 Msa1068660:CDS 55.0%
GACAATTCGTTCCCTGCCTC+TGG + chr7_2:63839442-63839461 Msa1068660:CDS 55.0%
! TCTGGAGCCCCTGAAAACCA+GGG + chr7_2:63839460-63839479 Msa1068660:CDS 55.0%
CTCCTTCTTCAACAGGACCC+TGG - chr7_2:63839480-63839499 None:intergenic 55.0%
TTTGAACGCCACAGTGGCAC+TGG + chr7_2:63839613-63839632 Msa1068660:CDS 55.0%
TTGAACGCCACAGTGGCACT+GGG + chr7_2:63839614-63839633 Msa1068660:CDS 55.0%
!! TCAAGCGTGAAGGTGCTGGA+AGG + chr7_2:63839744-63839763 Msa1068660:CDS 55.0%
!! CAAGCGTGAAGGTGCTGGAA+GGG + chr7_2:63839745-63839764 Msa1068660:CDS 55.0%
!! AAGCGTGAAGGTGCTGGAAG+GGG + chr7_2:63839746-63839765 Msa1068660:CDS 55.0%
!! AAGGTGCTGGAAGGGGTAAC+TGG + chr7_2:63839753-63839772 Msa1068660:CDS 55.0%
!! AGGTGCTGGAAGGGGTAACT+GGG + chr7_2:63839754-63839773 Msa1068660:CDS 55.0%
CTTGCACGATAAGGCCTGCA+TGG - chr7_2:63840705-63840724 None:intergenic 55.0%
GCGCCCACCTGAGTTATAGT+GGG - chr7_2:63841515-63841534 None:intergenic 55.0%
CACTATAACTCAGGTGGGCG+CGG + chr7_2:63841514-63841533 Msa1068660:CDS 55.0%
TGCCCGGGATCTTCAATGGA+TGG - chr7_2:63841655-63841674 None:intergenic 55.0%
ACCCAAGGTAGGGAAATGCC+CGG - chr7_2:63841671-63841690 None:intergenic 55.0%
CTAACCAGCCTGAGCAGGAG+GGG - chr7_2:63838123-63838142 None:intergenic 60.0%
!! GGTCGTGGATTTGGTGGACG+AGG + chr7_2:63839328-63839347 Msa1068660:CDS 60.0%
!! CGTGGATTTGGTGGACGAGG+AGG + chr7_2:63839331-63839350 Msa1068660:CDS 60.0%
CTCCACGTCCACCAAACCCA+CGG - chr7_2:63839360-63839379 None:intergenic 60.0%
CACGACCACCACCAAATCCG+CGG - chr7_2:63839387-63839406 None:intergenic 60.0%
!! GGATTTGGTGGTGGTCGTGG+AGG + chr7_2:63839388-63839407 Msa1068660:CDS 60.0%
GGTCGTGGAGGTCGTGGTTT+CGG + chr7_2:63839400-63839419 Msa1068660:CDS 60.0%
TTTCAGGGGCTCCAGAGGCA+GGG - chr7_2:63839456-63839475 None:intergenic 60.0%
!! TTTTCAGGGGCTCCAGAGGC+AGG - chr7_2:63839457-63839476 None:intergenic 60.0%
!! CTGGTTTTCAGGGGCTCCAG+AGG - chr7_2:63839461-63839480 None:intergenic 60.0%
!! CTCTGGAGCCCCTGAAAACC+AGG + chr7_2:63839459-63839478 Msa1068660:CDS 60.0%
!! CGTAGCTATGGTGGACCACG+AGG + chr7_2:63839517-63839536 Msa1068660:CDS 60.0%
! GGTGCTGGAAGGGGTAACTG+GGG + chr7_2:63839755-63839774 Msa1068660:CDS 60.0%
CGCGCCCACCTGAGTTATAG+TGG - chr7_2:63841516-63841535 None:intergenic 60.0%
CTCCTCCTCCTCGTGTACCA+CGG - chr7_2:63841555-63841574 None:intergenic 60.0%
TCCCGGGCATTTCCCTACCT+TGG + chr7_2:63841666-63841685 Msa1068660:CDS 60.0%
CCCAAGGTAGGGAAATGCCC+GGG - chr7_2:63841670-63841689 None:intergenic 60.0%
CCCGGGCATTTCCCTACCTT+GGG + chr7_2:63841667-63841686 Msa1068660:CDS 60.0%
! GCAGGAGGGGTGGGCTTAGA+AGG - chr7_2:63838110-63838129 None:intergenic 65.0%
TAAGCCCACCCCTCCTGCTC+AGG + chr7_2:63838112-63838131 Msa1068660:CDS 65.0%
GGACGCGGTGGTCGTGGATT+TGG + chr7_2:63839319-63839338 Msa1068660:CDS 65.0%
CGCGGTGGTCGTGGATTTGG+TGG + chr7_2:63839322-63839341 Msa1068660:CDS 65.0%
GTGGACGAGGAGGTGACCGT+GGG + chr7_2:63839341-63839360 Msa1068660:CDS 65.0%
CGAGGAGGTGACCGTGGGTT+TGG + chr7_2:63839346-63839365 Msa1068660:CDS 65.0%
GGAGGTGACCGTGGGTTTGG+TGG + chr7_2:63839349-63839368 Msa1068660:CDS 65.0%
!! GACCGTGGGTTTGGTGGACG+TGG + chr7_2:63839355-63839374 Msa1068660:CDS 65.0%
!! CGTGGGTTTGGTGGACGTGG+AGG + chr7_2:63839358-63839377 Msa1068660:CDS 65.0%
CGTGGAGGTGACCGCGGATT+TGG + chr7_2:63839373-63839392 Msa1068660:CDS 65.0%
GGAGGTGACCGCGGATTTGG+TGG + chr7_2:63839376-63839395 Msa1068660:CDS 65.0%
!! GGTGACCGCGGATTTGGTGG+TGG + chr7_2:63839379-63839398 Msa1068660:CDS 65.0%
!! CGCGGATTTGGTGGTGGTCG+TGG + chr7_2:63839385-63839404 Msa1068660:CDS 65.0%
AACCTCCACGACGACCTCCG+CGG - chr7_2:63839549-63839568 None:intergenic 65.0%
ATAACTCAGGTGGGCGCGGC+AGG + chr7_2:63841518-63841537 Msa1068660:CDS 65.0%
TAACTCAGGTGGGCGCGGCA+GGG + chr7_2:63841519-63841538 Msa1068660:CDS 65.0%
CGTGGTACACGAGGAGGAGG+AGG + chr7_2:63841553-63841572 Msa1068660:CDS 65.0%
GGTACACGAGGAGGAGGAGG+AGG + chr7_2:63841556-63841575 Msa1068660:CDS 65.0%
ACACGAGGAGGAGGAGGAGG+AGG + chr7_2:63841559-63841578 Msa1068660:CDS 65.0%
GGAGGAGGAGGAGGTTTCCG+TGG + chr7_2:63841604-63841623 Msa1068660:CDS 65.0%
CCAGCCTGAGCAGGAGGGGT+GGG - chr7_2:63838119-63838138 None:intergenic 70.0%
ACCAGCCTGAGCAGGAGGGG+TGG - chr7_2:63838120-63838139 None:intergenic 70.0%
GAAGGAGGACGCGGTGGTCG+TGG + chr7_2:63839313-63839332 Msa1068660:CDS 70.0%
GGTGGACGAGGAGGTGACCG+TGG + chr7_2:63839340-63839359 Msa1068660:CDS 70.0%
GGTGGACGTGGAGGTGACCG+CGG + chr7_2:63839367-63839386 Msa1068660:CDS 70.0%
! GGTGGTGGTCGTGGAGGTCG+TGG + chr7_2:63839394-63839413 Msa1068660:CDS 70.0%
GGACCACGAGGTCCCTACCG+CGG + chr7_2:63839529-63839548 Msa1068660:CDS 70.0%
CCACGACGACCTCCGCGGTA+GGG - chr7_2:63839544-63839563 None:intergenic 70.0%
TCCACGACGACCTCCGCGGT+AGG - chr7_2:63839545-63839564 None:intergenic 70.0%
TACCGCGGAGGTCGTCGTGG+AGG + chr7_2:63839544-63839563 Msa1068660:CDS 70.0%
! GCCACAGTGGCACTGGGCGA+GGG + chr7_2:63839620-63839639 Msa1068660:CDS 70.0%
! ACCCTCGCCCAGTGCCACTG+TGG - chr7_2:63839624-63839643 None:intergenic 70.0%
AACTCAGGTGGGCGCGGCAG+GGG + chr7_2:63841520-63841539 Msa1068660:CDS 70.0%
CGTGGTGGCCGTGGTACACG+AGG + chr7_2:63841544-63841563 Msa1068660:CDS 70.0%
GGTGGCCGTGGTACACGAGG+AGG + chr7_2:63841547-63841566 Msa1068660:CDS 70.0%
GGCCGTGGTACACGAGGAGG+AGG + chr7_2:63841550-63841569 Msa1068660:CDS 70.0%
CGAGGAGGAGGAGGAGGAGG+AGG + chr7_2:63841562-63841581 Msa1068660:CDS 70.0%
GGAGGAGGAGGAGGAGGAGG+AGG + chr7_2:63841565-63841584 Msa1068660:CDS 70.0%
GGAGGAGGAGGAGGAGGAGG+AGG + chr7_2:63841565-63841584 Msa1068660:CDS 70.0%
GGAGGAGGAGGAGGAGGAGG+AGG + chr7_2:63841565-63841584 Msa1068660:CDS 70.0%
GGAGGAGGAGGAGGAGGAGG+AGG + chr7_2:63841565-63841584 Msa1068660:CDS 70.0%
GGAGGAGGAGGAGGAGGAGG+AGG + chr7_2:63841565-63841584 Msa1068660:CDS 70.0%
GGAGGAGGAGGAGGAGGAGG+AGG + chr7_2:63841565-63841584 Msa1068660:CDS 70.0%
GGAGGAGGAGGAGGAGGAGG+AGG + chr7_2:63841565-63841584 Msa1068660:CDS 70.0%
GGAGGAGGAGGAGGAGGAGG+AGG + chr7_2:63841565-63841584 Msa1068660:CDS 70.0%
GGAGGAGGAGGAGGAGGAGG+AGG + chr7_2:63841565-63841584 Msa1068660:CDS 70.0%
GGAGGAGGAGGAGGAGGAGG+AGG + chr7_2:63841565-63841584 Msa1068660:CDS 70.0%
GGAGGAGGAGGAGGAGGAGG+AGG + chr7_2:63841565-63841584 Msa1068660:CDS 70.0%
CCCACCCCTCCTGCTCAGGC+TGG + chr7_2:63838116-63838135 Msa1068660:CDS 75.0%
CCTCCGCGGTAGGGACCTCG+TGG - chr7_2:63839535-63839554 None:intergenic 75.0%
CCACGAGGTCCCTACCGCGG+AGG + chr7_2:63839532-63839551 Msa1068660:CDS 75.0%
CCCTACCGCGGAGGTCGTCG+TGG + chr7_2:63839541-63839560 Msa1068660:CDS 75.0%
! CGCCACAGTGGCACTGGGCG+AGG + chr7_2:63839619-63839638 Msa1068660:CDS 75.0%
! GGCAGGGGACGTGGTGGCCG+TGG + chr7_2:63841535-63841554 Msa1068660:CDS 80.0%
! GGTGGGCGCGGCAGGGGACG+TGG + chr7_2:63841526-63841545 Msa1068660:CDS 85.0%
! GGGCGCGGCAGGGGACGTGG+TGG + chr7_2:63841529-63841548 Msa1068660:CDS 85.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 63837685 63841699 63837685 ID=Msa1068660;Name=Msa1068660
chr7_2 mRNA 63837685 63841699 63837685 ID=Msa1068660-mRNA-1;Parent=Msa1068660;Name=Msa1068660-mRNA-1;_AED=0.17;_eAED=0.17;_QI=266|1|0.85|1|1|1|7|0|391
chr7_2 exon 63837685 63838137 63837685 ID=Msa1068660-mRNA-1:exon:13236;Parent=Msa1068660-mRNA-1
chr7_2 exon 63839296 63839641 63839296 ID=Msa1068660-mRNA-1:exon:13237;Parent=Msa1068660-mRNA-1
chr7_2 exon 63839736 63839801 63839736 ID=Msa1068660-mRNA-1:exon:13238;Parent=Msa1068660-mRNA-1
chr7_2 exon 63839915 63840047 63839915 ID=Msa1068660-mRNA-1:exon:13239;Parent=Msa1068660-mRNA-1
chr7_2 exon 63840599 63840754 63840599 ID=Msa1068660-mRNA-1:exon:13240;Parent=Msa1068660-mRNA-1
chr7_2 exon 63840868 63840924 63840868 ID=Msa1068660-mRNA-1:exon:13241;Parent=Msa1068660-mRNA-1
chr7_2 exon 63841469 63841699 63841469 ID=Msa1068660-mRNA-1:exon:13242;Parent=Msa1068660-mRNA-1
chr7_2 five_prime_UTR 63837685 63837950 63837685 ID=Msa1068660-mRNA-1:five_prime_utr;Parent=Msa1068660-mRNA-1
chr7_2 CDS 63837951 63838137 63837951 ID=Msa1068660-mRNA-1:cds;Parent=Msa1068660-mRNA-1
chr7_2 CDS 63839296 63839641 63839296 ID=Msa1068660-mRNA-1:cds;Parent=Msa1068660-mRNA-1
chr7_2 CDS 63839736 63839801 63839736 ID=Msa1068660-mRNA-1:cds;Parent=Msa1068660-mRNA-1
chr7_2 CDS 63839915 63840047 63839915 ID=Msa1068660-mRNA-1:cds;Parent=Msa1068660-mRNA-1
chr7_2 CDS 63840599 63840754 63840599 ID=Msa1068660-mRNA-1:cds;Parent=Msa1068660-mRNA-1
chr7_2 CDS 63840868 63840924 63840868 ID=Msa1068660-mRNA-1:cds;Parent=Msa1068660-mRNA-1
chr7_2 CDS 63841469 63841699 63841469 ID=Msa1068660-mRNA-1:cds;Parent=Msa1068660-mRNA-1
Gene Sequence

>Msa1068660

ATGGCCACTACCAATCCATTTGATTTGCTTGGTGATGACGCTGAGGACCCTTCTCAGCTCATCGTTGCTGAACAGCTCAAAGCTGCTGCTGCTCCTCCTGCTGCTAAGAAAGGTGCTGTCAAGGAACAGGGCAAGCCTAACAAGCCTGCGTTGTTGCCTTCTAAGCCCACCCCTCCTGCTCAGGCTGTGAGGGAGTCCAGAAATGAAGGAGGACGCGGTGGTCGTGGATTTGGTGGACGAGGAGGTGACCGTGGGTTTGGTGGACGTGGAGGTGACCGCGGATTTGGTGGTGGTCGTGGAGGTCGTGGTTTCGGCCGTGACTACTCAAATGATGACAATTCGTTCCCTGCCTCTGGAGCCCCTGAAAACCAGGGTCCTGTTGAAGAAGGAGATAGGTCCTCAGAAAGACGTAGCTATGGTGGACCACGAGGTCCCTACCGCGGAGGTCGTCGTGGAGGTTTCAACAATGGTGATGCTGGTGAAGAGGGAAGACCCCGAAGAACATTTGAACGCCACAGTGGCACTGGGCGAGGAAACGATTTCAAGCGTGAAGGTGCTGGAAGGGGTAACTGGGGAACAGAAACTGATGAAATTGCTCAGGTGACTGAAGAAGTCATGAATGAAGATGAAAAGAATTTGGGTGATGAGAAGCCTGCAGCTGAAACTGATGTTGCCGAAGGGAACAAGGATAGCCCTGCCAATGAAGCTGAAGAAAAGGAGCCTGAAGACAAGGAAATGACTCTGGAGGAATATGAGAAAGTGCTGGAAGAGAAAAGAAAGGCTTTGCAAGCTCTAAAGACTGAAGAGAGAAAGGTTGACACTAAAGCATTTGAAACCATGCAGGCCTTATCGTGCAAGAAAGACAATACTGAAATCTTTGCTAAATTGGGAGCTGATAAGGATAAGCGCAAAGAGGCTTATGACAAGGAAGAGAAAGCCAAGAAGTCTGTCAGTATCAATGAGTTTCTGAAGCCAGCTGAAGGAGAATCCCACTATAACTCAGGTGGGCGCGGCAGGGGACGTGGTGGCCGTGGTACACGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGTTTCCGTGGAAATTCGTACAGCAATGTACCTGCTCCATCCATTGAAGATCCCGGGCATTTCCCTACCTTGGGTGCCAAGTGA

Protein sequence

>Msa1068660

MATTNPFDLLGDDAEDPSQLIVAEQLKAAAAPPAAKKGAVKEQGKPNKPALLPSKPTPPAQAVRESRNEGGRGGRGFGGRGGDRGFGGRGGDRGFGGGRGGRGFGRDYSNDDNSFPASGAPENQGPVEEGDRSSERRSYGGPRGPYRGGRRGGFNNGDAGEEGRPRRTFERHSGTGRGNDFKREGAGRGNWGTETDEIAQVTEEVMNEDEKNLGDEKPAAETDVAEGNKDSPANEAEEKEPEDKEMTLEEYEKVLEEKRKALQALKTEERKVDTKAFETMQALSCKKDNTEIFAKLGADKDKRKEAYDKEEKAKKSVSINEFLKPAEGESHYNSGGRGRGRGGRGTRGGGGGGGGGGGGGGGGGGFRGNSYSNVPAPSIEDPGHFPTLGAK*