Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1149710 | AFK41196.1 | 91.860 | 86 | 7 | 0 | 125 | 210 | 164 | 249 | 3.20e-46 | 169 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1149710 | sp|B8AXC3|AP21_ORYSI | 86.111 | 72 | 10 | 0 | 139 | 210 | 215 | 286 | 1.26e-37 | 139 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1149710 | I3SLQ4 | 91.860 | 86 | 7 | 0 | 125 | 210 | 164 | 249 | 1.53e-46 | 169 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0006110 | Msa1149710 | 0.816936 | 4.276572e-52 | -8.615850e-47 |
Msa0007990 | Msa1149710 | 0.802402 | 5.705712e-49 | -8.615850e-47 |
Msa0022550 | Msa1149710 | 0.818739 | 1.675120e-52 | -8.615850e-47 |
Msa0026430 | Msa1149710 | 0.807166 | 5.771737e-50 | -8.615850e-47 |
Msa0036920 | Msa1149710 | 0.817057 | 4.017614e-52 | -8.615850e-47 |
Msa0042550 | Msa1149710 | 0.801395 | 9.189987e-49 | -8.615850e-47 |
Msa0043560 | Msa1149710 | 0.811460 | 6.922721e-51 | -8.615850e-47 |
Msa0050930 | Msa1149710 | 0.812006 | 5.267530e-51 | -8.615850e-47 |
Msa0054820 | Msa1149710 | 0.810346 | 1.206678e-50 | -8.615850e-47 |
Msa0056450 | Msa1149710 | 0.812260 | 4.637281e-51 | -8.615850e-47 |
Msa0077450 | Msa1149710 | 0.801647 | 8.159553e-49 | -8.615850e-47 |
Msa0626990 | Msa1149710 | 0.801735 | 7.824645e-49 | -8.615850e-47 |
Msa0627350 | Msa1149710 | 0.808766 | 2.636091e-50 | -8.615850e-47 |
Msa0661320 | Msa1149710 | 0.806509 | 7.946208e-50 | -8.615850e-47 |
Msa0676760 | Msa1149710 | 0.801607 | 8.312281e-49 | -8.615850e-47 |
Msa0688070 | Msa1149710 | 0.803638 | 3.169213e-49 | -8.615850e-47 |
Msa0689760 | Msa1149710 | 0.817244 | 3.647023e-52 | -8.615850e-47 |
Msa0693380 | Msa1149710 | 0.811786 | 5.881367e-51 | -8.615850e-47 |
Msa0716860 | Msa1149710 | 0.804874 | 1.751650e-49 | -8.615850e-47 |
Msa0753720 | Msa1149710 | 0.820239 | 7.619234e-53 | -8.615850e-47 |
Msa0756530 | Msa1149710 | 0.803181 | 3.940943e-49 | -8.615850e-47 |
Msa0760130 | Msa1149710 | 0.810805 | 9.601067e-51 | -8.615850e-47 |
Msa0800700 | Msa1149710 | 0.802119 | 6.524503e-49 | -8.615850e-47 |
Msa0830510 | Msa1149710 | 0.807865 | 4.101144e-50 | -8.615850e-47 |
Msa0832090 | Msa1149710 | 0.808623 | 2.827686e-50 | -8.615850e-47 |
Msa0123300 | Msa1149710 | 0.815605 | 8.487014e-52 | -8.615850e-47 |
Msa0130970 | Msa1149710 | 0.803975 | 2.696322e-49 | -8.615850e-47 |
Msa0149300 | Msa1149710 | 0.806185 | 9.299159e-50 | -8.615850e-47 |
Msa0170140 | Msa1149710 | 0.810231 | 1.277199e-50 | -8.615850e-47 |
Msa0178510 | Msa1149710 | 0.820765 | 5.770525e-53 | -8.615850e-47 |
Msa0189110 | Msa1149710 | 0.804568 | 2.029049e-49 | -8.615850e-47 |
Msa0218350 | Msa1149710 | 0.808131 | 3.600123e-50 | -8.615850e-47 |
Msa0231240 | Msa1149710 | 0.811154 | 8.068274e-51 | -8.615850e-47 |
Msa0389910 | Msa1149710 | 0.806785 | 6.947602e-50 | -8.615850e-47 |
Msa0426900 | Msa1149710 | 0.816614 | 5.049979e-52 | -8.615850e-47 |
Msa0436370 | Msa1149710 | 0.813476 | 2.510274e-51 | -8.615850e-47 |
Msa0439970 | Msa1149710 | 0.800581 | 1.347378e-48 | -8.615850e-47 |
Msa1040520 | Msa1149710 | 0.815143 | 1.075387e-51 | -8.615850e-47 |
Msa1079430 | Msa1149710 | 0.802892 | 4.521036e-49 | -8.615850e-47 |
Msa1080960 | Msa1149710 | 0.802484 | 5.488037e-49 | -8.615850e-47 |
Msa1082500 | Msa1149710 | 0.817429 | 3.313515e-52 | -8.615850e-47 |
Msa1098250 | Msa1149710 | 0.802043 | 6.765298e-49 | -8.615850e-47 |
Msa0243250 | Msa1149710 | 0.830580 | 2.710996e-55 | -8.615850e-47 |
Msa0245940 | Msa1149710 | 0.804361 | 2.241567e-49 | -8.615850e-47 |
Msa0262510 | Msa1149710 | 0.803225 | 3.857990e-49 | -8.615850e-47 |
Msa0264780 | Msa1149710 | 0.811762 | 5.953463e-51 | -8.615850e-47 |
Msa0276920 | Msa1149710 | 0.837104 | 6.328952e-57 | -8.615850e-47 |
Msa0281640 | Msa1149710 | 0.800801 | 1.215253e-48 | -8.615850e-47 |
Msa0308460 | Msa1149710 | 0.803118 | 4.060904e-49 | -8.615850e-47 |
Msa0316800 | Msa1149710 | 0.808100 | 3.656060e-50 | -8.615850e-47 |
Msa0320800 | Msa1149710 | 0.802548 | 5.324833e-49 | -8.615850e-47 |
Msa0323370 | Msa1149710 | 0.804809 | 1.807748e-49 | -8.615850e-47 |
Msa1118110 | Msa1149710 | 0.801234 | 9.915140e-49 | -8.615850e-47 |
Msa1127770 | Msa1149710 | 0.842184 | 3.019756e-58 | -8.615850e-47 |
Msa1137570 | Msa1149710 | 0.801672 | 8.061291e-49 | -8.615850e-47 |
Msa1149710 | Msa1152990 | 0.805260 | 1.454792e-49 | -8.615850e-47 |
Msa1149710 | Msa1188710 | 0.816107 | 6.559063e-52 | -8.615850e-47 |
Msa1149710 | Msa1224480 | 0.806176 | 9.341824e-50 | -8.615850e-47 |
Msa1149710 | Msa1241570 | 0.800761 | 1.238216e-48 | -8.615850e-47 |
Msa1149710 | Msa1297290 | 0.809935 | 1.479332e-50 | -8.615850e-47 |
Msa1149710 | Msa1333680 | 0.802448 | 5.582532e-49 | -8.615850e-47 |
Msa1149710 | Msa1333730 | 0.811534 | 6.671526e-51 | -8.615850e-47 |
Msa1149710 | Msa1353470 | 0.820924 | 5.304245e-53 | -8.615850e-47 |
Msa1149710 | Msa1372150 | 0.806003 | 1.015930e-49 | -8.615850e-47 |
Msa1149710 | Msa1379850 | 0.814183 | 1.753962e-51 | -8.615850e-47 |
Msa1149710 | Msa1385000 | 0.810472 | 1.133110e-50 | -8.615850e-47 |
Msa1149710 | Msa1392260 | 0.802496 | 5.458000e-49 | -8.615850e-47 |
Msa1149710 | Msa1408620 | -0.812240 | 4.683924e-51 | -8.615850e-47 |
Msa1149710 | Msa1418260 | 0.808719 | 2.697347e-50 | -8.615850e-47 |
Msa1149710 | Msa1420250 | 0.815072 | 1.115105e-51 | -8.615850e-47 |
Msa1149710 | Msa1435270 | 0.803576 | 3.263962e-49 | -8.615850e-47 |
Msa1149710 | Msa1440940 | 0.805099 | 1.571919e-49 | -8.615850e-47 |
Msa1149710 | Msa1457430 | 0.800633 | 1.315155e-48 | -8.615850e-47 |
Msa1149710 | Msa1459050 | 0.815826 | 7.577111e-52 | -8.615850e-47 |
Msa0484780 | Msa1149710 | 0.833865 | 4.172085e-56 | -8.615850e-47 |
Msa0495330 | Msa1149710 | 0.804291 | 2.317979e-49 | -8.615850e-47 |
Msa0512900 | Msa1149710 | 0.803163 | 3.975331e-49 | -8.615850e-47 |
Msa0526940 | Msa1149710 | 0.803804 | 2.926326e-49 | -8.615850e-47 |
Msa0530650 | Msa1149710 | 0.810150 | 1.329997e-50 | -8.615850e-47 |
Msa0532350 | Msa1149710 | 0.800990 | 1.112172e-48 | -8.615850e-47 |
Msa0572480 | Msa1149710 | 0.807288 | 5.439052e-50 | -8.615850e-47 |
Msa0866410 | Msa1149710 | 0.804342 | 2.262016e-49 | -8.615850e-47 |
Msa0868160 | Msa1149710 | 0.808578 | 2.891343e-50 | -8.615850e-47 |
Msa0873860 | Msa1149710 | 0.802610 | 5.169579e-49 | -8.615850e-47 |
Msa0900620 | Msa1149710 | 0.816252 | 6.084847e-52 | -8.615850e-47 |
Msa0939000 | Msa1149710 | 0.803513 | 3.363571e-49 | -8.615850e-47 |
Msa0954550 | Msa1149710 | 0.814813 | 1.272465e-51 | -8.615850e-47 |
Msa0969450 | Msa1149710 | 0.816265 | 6.044530e-52 | -8.615850e-47 |
Msa0969520 | Msa1149710 | 0.830912 | 2.247879e-55 | -8.615850e-47 |
Msa0975940 | Msa1149710 | 0.814676 | 1.364773e-51 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1149710 | MtrunA17_Chr2g0325911 | 100.000 | 78 | 0 | 0 | 133 | 210 | 172 | 249 | 3.57e-50 | 168 |
Msa1149710 | MtrunA17_Chr3g0126151 | 77.778 | 81 | 18 | 0 | 130 | 210 | 44 | 124 | 9.41e-40 | 133 |
Msa1149710 | MtrunA17_Chr7g0263581 | 81.944 | 72 | 13 | 0 | 139 | 210 | 183 | 254 | 4.79e-37 | 134 |
Msa1149710 | MtrunA17_Chr4g0030191 | 83.333 | 72 | 12 | 0 | 139 | 210 | 175 | 246 | 1.50e-36 | 132 |
Msa1149710 | MtrunA17_Chr4g0053181 | 80.556 | 72 | 14 | 0 | 139 | 210 | 220 | 291 | 5.68e-36 | 132 |
Msa1149710 | MtrunA17_Chr5g0401891 | 80.556 | 72 | 14 | 0 | 139 | 210 | 196 | 267 | 9.47e-36 | 131 |
Msa1149710 | MtrunA17_Chr8g0367311 | 53.165 | 79 | 36 | 1 | 133 | 210 | 33 | 111 | 1.49e-21 | 89.4 |
Msa1149710 | MtrunA17_Chr3g0135161 | 48.276 | 87 | 44 | 1 | 125 | 210 | 350 | 436 | 4.90e-21 | 90.5 |
Msa1149710 | MtrunA17_Chr4g0054351 | 48.276 | 87 | 44 | 1 | 125 | 210 | 353 | 439 | 5.09e-21 | 90.5 |
Msa1149710 | MtrunA17_Chr4g0072291 | 51.899 | 79 | 37 | 1 | 133 | 210 | 210 | 288 | 1.93e-20 | 88.6 |
Msa1149710 | MtrunA17_Chr7g0249621 | 39.837 | 123 | 60 | 3 | 89 | 210 | 279 | 388 | 5.27e-20 | 87.4 |
Msa1149710 | MtrunA17_Chr4g0073521 | 53.165 | 79 | 36 | 1 | 133 | 210 | 95 | 173 | 6.78e-20 | 86.3 |
Msa1149710 | MtrunA17_Chr8g0343851 | 50.617 | 81 | 39 | 1 | 131 | 210 | 294 | 374 | 1.23e-19 | 86.7 |
Msa1149710 | MtrunA17_Chr5g0412151 | 50.633 | 79 | 38 | 1 | 133 | 210 | 275 | 353 | 2.06e-19 | 85.9 |
Msa1149710 | MtrunA17_Chr1g0152161 | 44.828 | 87 | 47 | 1 | 125 | 210 | 352 | 438 | 2.19e-19 | 85.9 |
Msa1149710 | MtrunA17_Chr6g0452911 | 51.899 | 79 | 37 | 1 | 133 | 210 | 119 | 197 | 3.55e-19 | 84.3 |
Msa1149710 | MtrunA17_Chr5g0400871 | 48.276 | 87 | 44 | 1 | 125 | 210 | 292 | 378 | 5.77e-19 | 84.3 |
Msa1149710 | MtrunA17_Chr4g0032631 | 48.101 | 79 | 40 | 1 | 133 | 210 | 214 | 292 | 7.42e-19 | 84.3 |
Msa1149710 | MtrunA17_Chr2g0328971 | 39.007 | 141 | 80 | 3 | 74 | 210 | 155 | 293 | 2.47e-18 | 82.8 |
Msa1149710 | MtrunA17_Chr8g0355191 | 51.899 | 79 | 37 | 1 | 133 | 210 | 103 | 181 | 3.60e-18 | 82.0 |
Msa1149710 | MtrunA17_Chr7g0216601 | 49.367 | 79 | 39 | 1 | 133 | 210 | 116 | 194 | 6.87e-18 | 80.9 |
Msa1149710 | MtrunA17_Chr4g0002011 | 50.685 | 73 | 35 | 1 | 139 | 210 | 93 | 165 | 1.28e-16 | 77.0 |
Msa1149710 | MtrunA17_Chr8g0362541 | 49.315 | 73 | 36 | 1 | 139 | 210 | 123 | 195 | 9.83e-16 | 74.7 |
Msa1149710 | MtrunA17_Chr8g0355181 | 51.899 | 79 | 37 | 1 | 133 | 210 | 104 | 182 | 6.22e-14 | 69.7 |
Msa1149710 | MtrunA17_Chr1g0170761 | 53.030 | 66 | 29 | 2 | 139 | 203 | 181 | 245 | 2.37e-12 | 65.1 |
Msa1149710 | MtrunA17_Chr7g0257361 | 42.857 | 70 | 36 | 1 | 139 | 208 | 114 | 179 | 1.14e-11 | 63.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1149710 | AT2G28550.2 | 86.111 | 72 | 10 | 0 | 139 | 210 | 197 | 268 | 7.61e-39 | 135 |
Msa1149710 | AT2G28550.6 | 86.111 | 72 | 10 | 0 | 139 | 210 | 197 | 268 | 7.61e-39 | 135 |
Msa1149710 | AT2G28550.5 | 86.111 | 72 | 10 | 0 | 139 | 210 | 31 | 102 | 8.75e-39 | 135 |
Msa1149710 | AT2G28550.4 | 86.111 | 72 | 10 | 0 | 139 | 210 | 197 | 268 | 3.61e-38 | 135 |
Msa1149710 | AT2G28550.1 | 86.111 | 72 | 10 | 0 | 139 | 210 | 197 | 268 | 1.87e-37 | 135 |
Msa1149710 | AT2G28550.3 | 86.111 | 72 | 10 | 0 | 139 | 210 | 197 | 268 | 1.88e-37 | 135 |
Msa1149710 | AT4G36920.1 | 77.778 | 72 | 16 | 0 | 139 | 210 | 175 | 246 | 2.78e-35 | 129 |
Msa1149710 | AT4G36920.2 | 77.778 | 72 | 16 | 0 | 139 | 210 | 175 | 246 | 2.78e-35 | 129 |
Msa1149710 | AT5G67180.4 | 72.222 | 72 | 20 | 0 | 139 | 210 | 140 | 211 | 7.53e-33 | 119 |
Msa1149710 | AT5G67180.3 | 72.222 | 72 | 20 | 0 | 139 | 210 | 140 | 211 | 1.09e-32 | 119 |
Msa1149710 | AT5G67180.2 | 72.222 | 72 | 20 | 0 | 139 | 210 | 140 | 211 | 2.04e-32 | 119 |
Msa1149710 | AT5G67180.1 | 72.222 | 72 | 20 | 0 | 139 | 210 | 140 | 211 | 2.05e-32 | 120 |
Msa1149710 | AT5G60120.6 | 62.857 | 70 | 26 | 0 | 139 | 208 | 204 | 273 | 6.34e-23 | 95.9 |
Msa1149710 | AT5G60120.1 | 62.857 | 70 | 26 | 0 | 139 | 208 | 204 | 273 | 6.98e-23 | 95.9 |
Msa1149710 | AT5G60120.2 | 62.857 | 70 | 26 | 0 | 139 | 208 | 204 | 273 | 8.81e-23 | 95.9 |
Msa1149710 | AT5G60120.4 | 62.857 | 70 | 26 | 0 | 139 | 208 | 204 | 273 | 9.85e-23 | 95.1 |
Msa1149710 | AT5G60120.3 | 62.857 | 70 | 26 | 0 | 139 | 208 | 204 | 273 | 9.85e-23 | 95.1 |
Msa1149710 | AT5G60120.5 | 62.857 | 70 | 26 | 0 | 139 | 208 | 204 | 273 | 9.85e-23 | 95.1 |
Msa1149710 | AT1G51190.1 | 50.633 | 79 | 38 | 1 | 133 | 210 | 238 | 316 | 4.06e-20 | 88.2 |
Msa1149710 | AT5G57390.2 | 50.633 | 79 | 38 | 1 | 133 | 210 | 133 | 211 | 8.97e-20 | 87.0 |
Msa1149710 | AT5G57390.1 | 50.633 | 79 | 38 | 1 | 133 | 210 | 251 | 329 | 9.53e-20 | 87.0 |
Msa1149710 | AT1G72570.1 | 50.633 | 79 | 38 | 1 | 133 | 210 | 271 | 349 | 9.63e-20 | 86.7 |
Msa1149710 | AT5G17430.1 | 51.899 | 79 | 37 | 1 | 133 | 210 | 258 | 336 | 1.02e-19 | 87.0 |
Msa1149710 | AT5G17430.2 | 51.899 | 79 | 37 | 1 | 133 | 210 | 196 | 274 | 1.02e-19 | 87.0 |
Msa1149710 | AT3G20840.1 | 48.101 | 79 | 40 | 1 | 133 | 210 | 229 | 307 | 4.06e-19 | 85.5 |
Msa1149710 | AT5G65510.3 | 49.367 | 79 | 39 | 1 | 133 | 210 | 221 | 299 | 8.97e-19 | 83.2 |
Msa1149710 | AT5G10510.6 | 49.367 | 79 | 39 | 1 | 133 | 210 | 316 | 394 | 1.53e-18 | 83.6 |
Msa1149710 | AT5G10510.4 | 49.367 | 79 | 39 | 1 | 133 | 210 | 316 | 394 | 1.53e-18 | 83.6 |
Msa1149710 | AT5G10510.2 | 41.406 | 128 | 69 | 3 | 87 | 210 | 228 | 353 | 1.56e-18 | 83.6 |
Msa1149710 | AT5G65510.2 | 49.367 | 79 | 39 | 1 | 133 | 210 | 279 | 357 | 1.64e-18 | 83.6 |
Msa1149710 | AT5G65510.1 | 49.367 | 79 | 39 | 1 | 133 | 210 | 279 | 357 | 1.64e-18 | 83.6 |
Msa1149710 | AT5G10510.3 | 49.367 | 79 | 39 | 1 | 133 | 210 | 336 | 414 | 1.66e-18 | 83.6 |
Msa1149710 | AT5G65510.4 | 49.367 | 79 | 39 | 1 | 133 | 210 | 221 | 299 | 1.68e-18 | 83.2 |
Msa1149710 | AT5G10510.7 | 49.367 | 79 | 39 | 1 | 133 | 210 | 278 | 356 | 1.73e-18 | 83.6 |
Msa1149710 | AT5G10510.5 | 49.367 | 79 | 39 | 1 | 133 | 210 | 278 | 356 | 1.73e-18 | 83.6 |
Msa1149710 | AT5G10510.1 | 49.367 | 79 | 39 | 1 | 133 | 210 | 301 | 379 | 1.82e-18 | 83.6 |
Msa1149710 | AT1G16060.3 | 55.556 | 72 | 31 | 1 | 140 | 210 | 43 | 114 | 2.09e-18 | 81.6 |
Msa1149710 | AT1G79700.4 | 53.425 | 73 | 33 | 1 | 139 | 210 | 24 | 96 | 2.13e-18 | 80.5 |
Msa1149710 | AT1G79700.3 | 53.425 | 73 | 33 | 1 | 139 | 210 | 30 | 102 | 2.26e-18 | 80.9 |
Msa1149710 | AT4G37750.1 | 45.977 | 87 | 46 | 1 | 125 | 210 | 323 | 409 | 2.49e-18 | 83.2 |
Msa1149710 | AT1G16060.1 | 55.556 | 72 | 31 | 1 | 140 | 210 | 113 | 184 | 3.33e-18 | 81.6 |
Msa1149710 | AT3G54990.2 | 58.730 | 63 | 26 | 0 | 139 | 201 | 166 | 228 | 3.89e-18 | 80.1 |
Msa1149710 | AT2G39250.2 | 55.072 | 69 | 31 | 0 | 125 | 193 | 138 | 206 | 5.40e-18 | 79.7 |
Msa1149710 | AT1G79700.2 | 53.425 | 73 | 33 | 1 | 139 | 210 | 106 | 178 | 5.47e-18 | 80.9 |
Msa1149710 | AT2G39250.1 | 55.072 | 69 | 31 | 0 | 125 | 193 | 138 | 206 | 8.57e-18 | 80.5 |
Msa1149710 | AT3G54990.1 | 58.730 | 63 | 26 | 0 | 139 | 201 | 166 | 228 | 1.08e-17 | 80.5 |
Msa1149710 | AT3G54320.4 | 49.367 | 79 | 39 | 1 | 133 | 210 | 47 | 125 | 1.12e-17 | 80.5 |
Msa1149710 | AT3G54320.5 | 49.367 | 79 | 39 | 1 | 133 | 210 | 47 | 125 | 1.12e-17 | 80.5 |
Msa1149710 | AT3G54320.3 | 41.818 | 110 | 62 | 2 | 103 | 210 | 82 | 191 | 1.32e-17 | 80.9 |
Msa1149710 | AT3G54320.1 | 49.367 | 79 | 39 | 1 | 133 | 210 | 113 | 191 | 1.65e-17 | 80.5 |
Msa1149710 | AT1G79700.1 | 52.113 | 71 | 33 | 1 | 139 | 208 | 106 | 176 | 1.13e-16 | 77.0 |
Msa1149710 | AT1G16060.2 | 60.000 | 50 | 19 | 1 | 162 | 210 | 1 | 50 | 9.60e-12 | 62.4 |
Msa1149710 | AT1G16060.4 | 60.000 | 50 | 19 | 1 | 162 | 210 | 1 | 50 | 9.60e-12 | 62.4 |
Msa1149710 | AT1G16060.6 | 60.000 | 50 | 19 | 1 | 162 | 210 | 1 | 50 | 9.60e-12 | 62.4 |
Msa1149710 | AT1G16060.5 | 60.000 | 50 | 19 | 1 | 162 | 210 | 1 | 50 | 9.60e-12 | 62.4 |
Msa1149710 | AT2G41710.1 | 41.667 | 72 | 38 | 1 | 139 | 210 | 124 | 191 | 1.00e-11 | 63.5 |
Msa1149710 | AT2G41710.4 | 41.667 | 72 | 38 | 1 | 139 | 210 | 124 | 191 | 1.07e-11 | 63.5 |
Msa1149710 | AT2G41710.3 | 41.667 | 72 | 38 | 1 | 139 | 210 | 159 | 226 | 1.32e-11 | 63.5 |
Msa1149710 | AT3G54320.2 | 58.000 | 50 | 20 | 1 | 162 | 210 | 1 | 50 | 6.00e-11 | 60.8 |
Find 58 sgRNAs with CRISPR-Local
Find 446 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTGTGGGAAGCAAGTTTATT+TGG | 0.193822 | 7_4:-31906155 | Msa1149710:CDS |
AGAATTGTTGTCACTGTTCT+TGG | 0.248951 | 7_4:-31908441 | Msa1149710:five_prime_UTR |
TGTGGGAAGCAAGTTTATTT+GGG | 0.340786 | 7_4:-31906154 | Msa1149710:intron |
TTGTAAAATCTAGCATAGTT+AGG | 0.344940 | 7_4:-31908556 | None:intergenic |
ATCGAGCTGCTATAAAGTTC+AGG | 0.349850 | 7_4:-31905873 | Msa1149710:CDS |
ATCGAGCTGCTATAAAGTTC+AGG | 0.349850 | 7_4:-31906040 | Msa1149710:CDS |
CTCTGTAGTGTTCCTTTGCA+TGG | 0.410346 | 7_4:+31907832 | None:intergenic |
CTTTATAGCAGCTCGATCAT+AGG | 0.418554 | 7_4:+31905879 | None:intergenic |
CTTTATAGCAGCTCGATCAT+AGG | 0.418554 | 7_4:+31906046 | None:intergenic |
TTTCAATCTAGTTGAGTATG+AGG | 0.420566 | 7_4:-31905830 | Msa1149710:CDS |
TCTCATGTTGCACATGTTTG+TGG | 0.425656 | 7_4:-31906784 | Msa1149710:CDS |
TGGTCGTTGGGAAGCTAGAA+TGG | 0.444385 | 7_4:-31901584 | Msa1149710:CDS |
GTATGAGGAAGATATGAATC+AGG | 0.458736 | 7_4:-31905815 | Msa1149710:intron |
GTTGGAATCGCAGAGGAGAT+TGG | 0.467898 | 7_4:-31907776 | Msa1149710:CDS |
TATGGTGTGGATCGGATTGA+TGG | 0.479706 | 7_4:-31906761 | Msa1149710:CDS |
CAGATCTATTATGCGGAGGC+AGG | 0.482159 | 7_4:+31907798 | None:intergenic |
ACTTCACAAATGTGGTCGTT+GGG | 0.498413 | 7_4:-31901596 | Msa1149710:CDS |
CACTTCACAAATGTGGTCGT+TGG | 0.499133 | 7_4:-31901597 | Msa1149710:CDS |
TGTTGCACATGTTTGTGGTA+TGG | 0.518542 | 7_4:-31906779 | Msa1149710:CDS |
CCTCCGCATAATAGATCTGT+TGG | 0.525327 | 7_4:-31907794 | Msa1149710:CDS |
GCTAGAATGGGACAACTCCT+TGG | 0.525862 | 7_4:-31901571 | Msa1149710:CDS |
TCGAGCTGCTATAAAGTTCA+GGG | 0.532175 | 7_4:-31905872 | Msa1149710:CDS |
TCGAGCTGCTATAAAGTTCA+GGG | 0.532175 | 7_4:-31906039 | Msa1149710:CDS |
GCCACAGTAACGGTTTCTCA+AGG | 0.540760 | 7_4:-31901645 | Msa1149710:CDS |
CATAGTTAGGTTATTGAATG+TGG | 0.543282 | 7_4:-31908543 | Msa1149710:five_prime_UTR |
TTGACTTACGGTGGCAGAAG+AGG | 0.547788 | 7_4:-31907922 | Msa1149710:CDS |
AACAGTGACAACAATTCTGA+TGG | 0.549766 | 7_4:+31908446 | None:intergenic |
TAGATACCTCAGCTCTCGAT+AGG | 0.549804 | 7_4:+31908390 | None:intergenic |
ATACATAGGGACTTGACTTA+CGG | 0.552881 | 7_4:-31907934 | Msa1149710:intron |
CACATGTTTGTGGTATGGTG+TGG | 0.561711 | 7_4:-31906774 | Msa1149710:CDS |
CCACAGTAACGGTTTCTCAA+GGG | 0.580766 | 7_4:-31901644 | Msa1149710:CDS |
GGTCGTTGGGAAGCTAGAAT+GGG | 0.582093 | 7_4:-31901583 | Msa1149710:CDS |
GATGAAGAATCTTTCAAAGG+AGG | 0.586926 | 7_4:-31901689 | Msa1149710:CDS |
GTCTGAGAACAGCCATGCAA+AGG | 0.588863 | 7_4:-31907844 | Msa1149710:CDS |
ATTCTCCGTCGCCACAGTAA+CGG | 0.590290 | 7_4:-31901655 | Msa1149710:CDS |
ACAGATGAAGAATCTTTCAA+AGG | 0.598696 | 7_4:-31901692 | Msa1149710:intron |
CACAGTAACGGTTTCTCAAG+GGG | 0.599966 | 7_4:-31901643 | Msa1149710:CDS |
TCATGAAGGCTATGATTACA+CGG | 0.604160 | 7_4:-31906820 | Msa1149710:intron |
GTTTGTGGTATGGTGTGGAT+CGG | 0.607151 | 7_4:-31906769 | Msa1149710:CDS |
AGGTTGCGAAACCGCGACAT+CGG | 0.621185 | 7_4:+31908410 | None:intergenic |
AGAAACCGTTACTGTGGCGA+CGG | 0.638633 | 7_4:+31901650 | None:intergenic |
TGGTTTCATAACCGATGTCG+CGG | 0.643930 | 7_4:-31908421 | Msa1149710:exon |
CCCTTGAGAAACCGTTACTG+TGG | 0.647161 | 7_4:+31901644 | None:intergenic |
GGAGTAACACTTCACAAATG+TGG | 0.652625 | 7_4:-31901604 | Msa1149710:CDS |
AGGAATGTGATACAACTAGA+GGG | 0.659652 | 7_4:-31907902 | Msa1149710:CDS |
GCTAACTCACTGATTCTCGA+TGG | 0.667321 | 7_4:-31908471 | Msa1149710:five_prime_UTR |
CATGAAGGCTATGATTACAC+GGG | 0.668953 | 7_4:-31906819 | Msa1149710:intron |
GAGGAATGTGATACAACTAG+AGG | 0.672604 | 7_4:-31907903 | Msa1149710:CDS |
TCGCAACCTATCGAGAGCTG+AGG | 0.678178 | 7_4:-31908396 | Msa1149710:intron |
CCAACAGATCTATTATGCGG+AGG | 0.680399 | 7_4:+31907794 | None:intergenic |
CGAGCTGCTATAAAGTTCAG+GGG | 0.693245 | 7_4:-31905871 | Msa1149710:CDS |
CGAGCTGCTATAAAGTTCAG+GGG | 0.693245 | 7_4:-31906038 | Msa1149710:CDS |
AAAGGAACACTACAGAGGAG+AGG | 0.696033 | 7_4:-31907826 | Msa1149710:CDS |
ATTCCAACAGATCTATTATG+CGG | 0.701493 | 7_4:+31907791 | None:intergenic |
CATGCAAAGGAACACTACAG+AGG | 0.704612 | 7_4:-31907831 | Msa1149710:CDS |
TAGATCTGTTGGAATCGCAG+AGG | 0.704873 | 7_4:-31907783 | Msa1149710:CDS |
ACAGTAACGGTTTCTCAAGG+GGG | 0.706952 | 7_4:-31901642 | Msa1149710:CDS |
CATAGGGACTTGACTTACGG+TGG | 0.719305 | 7_4:-31907931 | Msa1149710:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TAATTTGTAGTTATATTTTT+TGG | - | chr7_4:31901959-31901978 | Msa1149710:intron | 10.0% |
!! | ATACTAATTTATTAATCAAA+AGG | + | chr7_4:31904322-31904341 | None:intergenic | 10.0% |
!!! | ATTTTTGATCTAAAAATTTT+GGG | + | chr7_4:31905295-31905314 | None:intergenic | 10.0% |
!!! | TTTTATTTTATTTGAATTGA+AGG | + | chr7_4:31907944-31907963 | None:intergenic | 10.0% |
!!! | TATTAGCATTTTAAATGTAT+TGG | + | chr7_4:31901917-31901936 | None:intergenic | 15.0% |
!! | TATACAAGATATAACTAAAA+AGG | + | chr7_4:31903426-31903445 | None:intergenic | 15.0% |
!!! | CATATTTTATTTTACTTTTC+TGG | - | chr7_4:31903471-31903490 | Msa1149710:intron | 15.0% |
!!! | TTTTTTGTGAATTTTGAATT+TGG | - | chr7_4:31903861-31903880 | Msa1149710:intron | 15.0% |
!!! | AATATCTAACTTGTTTTATT+TGG | - | chr7_4:31903894-31903913 | Msa1149710:intron | 15.0% |
!! | AATTAGTATATACATTATAG+AGG | - | chr7_4:31904333-31904352 | Msa1149710:intron | 15.0% |
!!! | ACTAAAAATGCAAATTTTTT+AGG | + | chr7_4:31905023-31905042 | None:intergenic | 15.0% |
!!! | GATTTTTGATCTAAAAATTT+TGG | + | chr7_4:31905296-31905315 | None:intergenic | 15.0% |
!!! | ATTCTTTAGGAAATTTTTAA+AGG | + | chr7_4:31906737-31906756 | None:intergenic | 15.0% |
!! | AAAATTGGTAAAAAATAATG+TGG | - | chr7_4:31906811-31906830 | Msa1149710:CDS | 15.0% |
!! | AAATAAAAGGAAAATTCAAT+GGG | + | chr7_4:31907694-31907713 | None:intergenic | 15.0% |
!! | AAAATAAAAGGAAAATTCAA+TGG | + | chr7_4:31907695-31907714 | None:intergenic | 15.0% |
!! | GTTTGATTAAGAAAAATAAA+AGG | + | chr7_4:31907707-31907726 | None:intergenic | 15.0% |
!!! | TTTTCTTAATCAAACTTTAA+TGG | - | chr7_4:31907712-31907731 | Msa1149710:intron | 15.0% |
!!! | TTGTGATTTTGTAAAAATTA+TGG | - | chr7_4:31908259-31908278 | Msa1149710:intron | 15.0% |
!! | TTTGTAAAAATTATGGAATA+TGG | - | chr7_4:31908266-31908285 | Msa1149710:intron | 15.0% |
!! | GTGATTAATTAACTCAATTT+AGG | - | chr7_4:31901759-31901778 | Msa1149710:intron | 20.0% |
!! | TTGTAACAATAATTAACATG+TGG | - | chr7_4:31902087-31902106 | Msa1149710:intron | 20.0% |
!!! | AATGAAATTATTTTGAGCAT+AGG | - | chr7_4:31902123-31902142 | Msa1149710:intron | 20.0% |
!! | GTATGGTTAAATTTGAATAT+AGG | - | chr7_4:31902373-31902392 | Msa1149710:intron | 20.0% |
!! | CAAAATGATACTCTTAATTA+AGG | + | chr7_4:31902796-31902815 | None:intergenic | 20.0% |
!! | AACTAATGATCAATAAAGAA+TGG | - | chr7_4:31902877-31902896 | Msa1149710:intron | 20.0% |
!! | AAACAAAATCAAACACTAAA+GGG | + | chr7_4:31903143-31903162 | None:intergenic | 20.0% |
!! | TAAACAAAATCAAACACTAA+AGG | + | chr7_4:31903144-31903163 | None:intergenic | 20.0% |
!! | TATGTTAAATTTACTTGATC+TGG | - | chr7_4:31903397-31903416 | Msa1149710:intron | 20.0% |
!! | ATGTTAAATTTACTTGATCT+GGG | - | chr7_4:31903398-31903417 | Msa1149710:intron | 20.0% |
!!! | AGATTTAAGTCATTTTATGA+GGG | - | chr7_4:31903562-31903581 | Msa1149710:intron | 20.0% |
!! | TAGCAAATAAATATGAAAAC+AGG | + | chr7_4:31903694-31903713 | None:intergenic | 20.0% |
!! | AACAAAATCATTATCAGTAA+CGG | + | chr7_4:31903809-31903828 | None:intergenic | 20.0% |
!!! | TGTTTGTAATTTTATGATGT+AGG | - | chr7_4:31903923-31903942 | Msa1149710:intron | 20.0% |
!!! | GTTTGTAATTTTATGATGTA+GGG | - | chr7_4:31903924-31903943 | Msa1149710:intron | 20.0% |
!!! | TATTTTTAGGTCCAAAATTA+GGG | + | chr7_4:31904393-31904412 | None:intergenic | 20.0% |
!!! | AGATTTGAGTTAGTATTTTT+AGG | + | chr7_4:31904406-31904425 | None:intergenic | 20.0% |
!!! | TTCAAATGCAATTTTTGAAA+TGG | + | chr7_4:31904633-31904652 | None:intergenic | 20.0% |
!!! | ACTCAGATGAAATTTTAAAA+TGG | + | chr7_4:31904793-31904812 | None:intergenic | 20.0% |
!! | ACGATTAAAATTGACAAAAA+CGG | + | chr7_4:31904924-31904943 | None:intergenic | 20.0% |
!!! | TTTCAATTTACGTTATTTTC+CGG | - | chr7_4:31904943-31904962 | Msa1149710:intron | 20.0% |
!!! | AATGAATTAAAATTGGTAAC+CGG | + | chr7_4:31904965-31904984 | None:intergenic | 20.0% |
!!! | GCAAATTTTTTAGGAATTTT+AGG | + | chr7_4:31905014-31905033 | None:intergenic | 20.0% |
!!! | GGAAATTTTTAAAGGTTTTT+TGG | + | chr7_4:31906729-31906748 | None:intergenic | 20.0% |
!! | ATTTCCTAAAGAATTCATAT+AGG | - | chr7_4:31906743-31906762 | Msa1149710:intron | 20.0% |
!!! | TGATATTTTGTGCTAAAAAT+TGG | - | chr7_4:31906854-31906873 | Msa1149710:intron | 20.0% |
!! | TAAGTATTACATTCTAACTT+TGG | + | chr7_4:31907380-31907399 | None:intergenic | 20.0% |
!! | AAAGTTAGAATGTAATACTT+AGG | - | chr7_4:31907379-31907398 | Msa1149710:intron | 20.0% |
!!! | GTTCATATTTTTTGGAAAAT+AGG | + | chr7_4:31907627-31907646 | None:intergenic | 20.0% |
!!! | ATTAGTTATTTTGCAAAATG+TGG | + | chr7_4:31907756-31907775 | None:intergenic | 20.0% |
!!! | TTGATTTTAAGTTCGAAAAT+TGG | + | chr7_4:31907838-31907857 | None:intergenic | 20.0% |
!!! | AAGAGGTTTTTTGTTTTTAT+TGG | + | chr7_4:31907861-31907880 | None:intergenic | 20.0% |
!! | ATAAAAACAAAAAACCTCTT+TGG | - | chr7_4:31907861-31907880 | Msa1149710:CDS | 20.0% |
!! | AAATTGATATTTACACCTAA+AGG | + | chr7_4:31908007-31908026 | None:intergenic | 20.0% |
!!! | GTGATATCTTATTTTTTCTT+GGG | + | chr7_4:31908179-31908198 | None:intergenic | 20.0% |
!! | AAGAAAAAATAAGATATCAC+CGG | - | chr7_4:31908179-31908198 | Msa1149710:intron | 20.0% |
!!! | TTTTGTTGTAGTTGTATGTT+TGG | - | chr7_4:31901827-31901846 | Msa1149710:intron | 25.0% |
! | TGTTACAAGTATCTATCAAA+AGG | + | chr7_4:31902075-31902094 | None:intergenic | 25.0% |
!!! | AGAAAGCTTTAGTACTTTTT+TGG | - | chr7_4:31902468-31902487 | Msa1149710:intron | 25.0% |
!!! | TTGTTAGCTAGTACTTTTTT+TGG | - | chr7_4:31902504-31902523 | Msa1149710:intron | 25.0% |
!!! | TGTTAGCTAGTACTTTTTTT+GGG | - | chr7_4:31902505-31902524 | Msa1149710:intron | 25.0% |
!!! | TGTTTTGTTGGTTAGTATTT+AGG | - | chr7_4:31902667-31902686 | Msa1149710:intron | 25.0% |
! | CAAATGAGAGAAATTATGTT+AGG | - | chr7_4:31902924-31902943 | Msa1149710:intron | 25.0% |
! | AATGAATCCAAATATGATTG+TGG | + | chr7_4:31903185-31903204 | None:intergenic | 25.0% |
! | GAACAAACATACATTATACA+AGG | + | chr7_4:31903265-31903284 | None:intergenic | 25.0% |
! | TAATGTATGTTTGTTCATGA+AGG | - | chr7_4:31903269-31903288 | Msa1149710:intron | 25.0% |
!!! | CAGATTTAAGTCATTTTATG+AGG | - | chr7_4:31903561-31903580 | Msa1149710:intron | 25.0% |
! | ACTAATGAATGAACAAATCA+TGG | - | chr7_4:31903597-31903616 | Msa1149710:intron | 25.0% |
! | ACAACTCAGATGATAAAATA+AGG | + | chr7_4:31903781-31903800 | None:intergenic | 25.0% |
!!! | ATCTAACTTGTTTTATTTGG+TGG | - | chr7_4:31903897-31903916 | Msa1149710:intron | 25.0% |
!! | TTGATATTTGTTCATTGACT+TGG | - | chr7_4:31904016-31904035 | Msa1149710:intron | 25.0% |
!! | TTGATATTTGTTCATTGACT+TGG | - | chr7_4:31904016-31904035 | Msa1149710:intron | 25.0% |
!!! | GTATTTTTAGGTCCAAAATT+AGG | + | chr7_4:31904394-31904413 | None:intergenic | 25.0% |
! | ATTTGCAAAATTCACATAGA+AGG | - | chr7_4:31904500-31904519 | Msa1149710:intron | 25.0% |
! | TTTGCAAAATTCACATAGAA+GGG | - | chr7_4:31904501-31904520 | Msa1149710:intron | 25.0% |
!!! | ACTGAAAGAAATTTTGACAT+AGG | + | chr7_4:31904541-31904560 | None:intergenic | 25.0% |
!!! | ATTTCATCTGAGTCATTTTT+AGG | - | chr7_4:31904800-31904819 | Msa1149710:intron | 25.0% |
!!! | TACTTTAAAGTACCTCATTT+AGG | - | chr7_4:31904880-31904899 | Msa1149710:intron | 25.0% |
!! | AACTTTGTAACAAACTTTTG+TGG | + | chr7_4:31905144-31905163 | None:intergenic | 25.0% |
!! | TGATTTGAGTTCAAGAAATT+CGG | + | chr7_4:31905377-31905396 | None:intergenic | 25.0% |
!! | AAGAAATTTTGAACAAGCAA+GGG | + | chr7_4:31906558-31906577 | None:intergenic | 25.0% |
!! | AAAGAAATTTTGAACAAGCA+AGG | + | chr7_4:31906559-31906578 | None:intergenic | 25.0% |
! | AAAACTCATGGAACTTTATT+TGG | + | chr7_4:31906590-31906609 | None:intergenic | 25.0% |
! | AGAAAGTTATCAAAAACTCA+TGG | + | chr7_4:31906602-31906621 | None:intergenic | 25.0% |
!!! | TTTTTGGACTAAAAAGTACA+AGG | + | chr7_4:31906713-31906732 | None:intergenic | 25.0% |
! | ATTCATCAAGAAATTGGAAT+TGG | + | chr7_4:31906897-31906916 | None:intergenic | 25.0% |
! | TAAAACTTCATAACATCAAG+TGG | + | chr7_4:31906934-31906953 | None:intergenic | 25.0% |
!!! | TTTTTAATGGGTTTAGAATC+AGG | + | chr7_4:31907110-31907129 | None:intergenic | 25.0% |
! | TAAACCCATTAAAAATGTGT+TGG | - | chr7_4:31907115-31907134 | Msa1149710:intron | 25.0% |
!! | CATTCCAACACATTTTTAAT+GGG | + | chr7_4:31907122-31907141 | None:intergenic | 25.0% |
!! | ACATTCCAACACATTTTTAA+TGG | + | chr7_4:31907123-31907142 | None:intergenic | 25.0% |
!!! | ACTCATTTTGCCTTTATTTT+GGG | - | chr7_4:31907201-31907220 | Msa1149710:intron | 25.0% |
! | TTAAAGTGCAAGAAATAAGA+TGG | + | chr7_4:31907351-31907370 | None:intergenic | 25.0% |
! | GTATGTTTAGATGAATGTTT+AGG | - | chr7_4:31907584-31907603 | Msa1149710:intron | 25.0% |
!!! | GTGAAGTTGTTCATATTTTT+TGG | + | chr7_4:31907635-31907654 | None:intergenic | 25.0% |
!! | ATCATTTTCTTAAGAAACCT+TGG | - | chr7_4:31907659-31907678 | Msa1149710:intron | 25.0% |
!! | TCATTTTCTTAAGAAACCTT+GGG | - | chr7_4:31907660-31907679 | Msa1149710:intron | 25.0% |
!!! | ATCTTATTTTTTCTTGGGAA+GGG | + | chr7_4:31908174-31908193 | None:intergenic | 25.0% |
!!! | TATCTTATTTTTTCTTGGGA+AGG | + | chr7_4:31908175-31908194 | None:intergenic | 25.0% |
!!! | GGTGATATCTTATTTTTTCT+TGG | + | chr7_4:31908180-31908199 | None:intergenic | 25.0% |
!!! | TGTGTTTTATCTTGGTTTTT+CGG | + | chr7_4:31908239-31908258 | None:intergenic | 25.0% |
!! | AATCACAATGTGTTTTATCT+TGG | + | chr7_4:31908247-31908266 | None:intergenic | 25.0% |
!! | CTAGATTTGATTTTCAGTTG+AGG | - | chr7_4:31901790-31901809 | Msa1149710:intron | 30.0% |
! | TTTCTTTACTTGTGTTGTTC+TGG | - | chr7_4:31901887-31901906 | Msa1149710:intron | 30.0% |
GTTGTAAGCTTAAGTTTCTA+CGG | - | chr7_4:31901994-31902013 | Msa1149710:intron | 30.0% | |
AACTTTCACCAGAAAAACAA+AGG | + | chr7_4:31902035-31902054 | None:intergenic | 30.0% | |
ATTCCAACAGATCTATTATG+CGG | + | chr7_4:31902315-31902334 | None:intergenic | 30.0% | |
! | CTATTTTGTTCTATAAGCAG+AGG | + | chr7_4:31902401-31902420 | None:intergenic | 30.0% |
ATCGAACTGAATGTGAAAAT+GGG | - | chr7_4:31902437-31902456 | Msa1149710:intron | 30.0% | |
TTTGTGACTACAATGTGAAA+AGG | - | chr7_4:31902542-31902561 | Msa1149710:intron | 30.0% | |
TTGTGACTACAATGTGAAAA+GGG | - | chr7_4:31902543-31902562 | Msa1149710:intron | 30.0% | |
AACAGCTAAGTTCTTCTATA+TGG | - | chr7_4:31902770-31902789 | Msa1149710:intron | 30.0% | |
! | TTATTTTCTGTCCCTTAAGA+TGG | - | chr7_4:31902818-31902837 | Msa1149710:intron | 30.0% |
TTGAGACACAAGTTTACAAA+AGG | + | chr7_4:31902907-31902926 | None:intergenic | 30.0% | |
!! | AGAACAATTGTTATTTGCCA+AGG | + | chr7_4:31902992-31903011 | None:intergenic | 30.0% |
! | AAGTATTGTGTTCCTAATGT+TGG | - | chr7_4:31903018-31903037 | Msa1149710:intron | 30.0% |
ATATTTGGATTCATTGCCAA+GGG | - | chr7_4:31903190-31903209 | Msa1149710:intron | 30.0% | |
AACATACATTATACAAGGCA+AGG | + | chr7_4:31903260-31903279 | None:intergenic | 30.0% | |
TCATATTTGATATCAGACTG+AGG | - | chr7_4:31903494-31903513 | Msa1149710:intron | 30.0% | |
!! | TTTAAGTCATTTTATGAGGG+AGG | - | chr7_4:31903565-31903584 | Msa1149710:intron | 30.0% |
AATCATGGTACTTCAAAACA+AGG | - | chr7_4:31903612-31903631 | Msa1149710:intron | 30.0% | |
! | TCTAAAGTGTGCTTATATGT+AGG | - | chr7_4:31903744-31903763 | Msa1149710:intron | 30.0% |
CTAAAGTGTGCTTATATGTA+GGG | - | chr7_4:31903745-31903764 | Msa1149710:intron | 30.0% | |
TAAAGTGTGCTTATATGTAG+GGG | - | chr7_4:31903746-31903765 | Msa1149710:intron | 30.0% | |
CAGATGATAAAATAAGGTGA+GGG | + | chr7_4:31903775-31903794 | None:intergenic | 30.0% | |
TCAGATGATAAAATAAGGTG+AGG | + | chr7_4:31903776-31903795 | None:intergenic | 30.0% | |
!! | GATTTTGTTTGATTGACTAG+TGG | - | chr7_4:31903820-31903839 | Msa1149710:intron | 30.0% |
! | ATTTTATGATGTAGGGATTG+TGG | - | chr7_4:31903931-31903950 | Msa1149710:intron | 30.0% |
! | TTTTATGATGTAGGGATTGT+GGG | - | chr7_4:31903932-31903951 | Msa1149710:intron | 30.0% |
TTTCAATCTAGTTGAGTATG+AGG | - | chr7_4:31904106-31904125 | Msa1149710:intron | 30.0% | |
TTTCAATCTAGTTGAGTATG+AGG | - | chr7_4:31904106-31904125 | Msa1149710:intron | 30.0% | |
AAAATTAGGGTGTAACACAA+TGG | + | chr7_4:31904380-31904399 | None:intergenic | 30.0% | |
! | ATTGTGTTACACCCTAATTT+TGG | - | chr7_4:31904379-31904398 | Msa1149710:intron | 30.0% |
! | TGGGCTTATAACAAATTTTC+TGG | + | chr7_4:31905096-31905115 | None:intergenic | 30.0% |
!! | AGAAAATTTGTTATAAGCCC+AGG | - | chr7_4:31905095-31905114 | Msa1149710:intron | 30.0% |
AATAATCCAGTCACAATCAA+TGG | - | chr7_4:31905215-31905234 | Msa1149710:intron | 30.0% | |
AGTGAAATGTGTTTATGAGT+TGG | + | chr7_4:31905264-31905283 | None:intergenic | 30.0% | |
! | ATGTGATTTTCTGGGTTTTT+GGG | + | chr7_4:31905318-31905337 | None:intergenic | 30.0% |
!! | TGATCTTGTGAATTTGTTGT+TGG | + | chr7_4:31905450-31905469 | None:intergenic | 30.0% |
AGCATCAATAGAGTGTAATT+AGG | - | chr7_4:31906052-31906071 | Msa1149710:intron | 30.0% | |
! | CAAAAGAGGAGCATAATAAA+CGG | + | chr7_4:31906286-31906305 | None:intergenic | 30.0% |
! | AGAAATTTTGAACAAGCAAG+GGG | + | chr7_4:31906557-31906576 | None:intergenic | 30.0% |
GAAGCCTATATGAATTCTTT+AGG | + | chr7_4:31906750-31906769 | None:intergenic | 30.0% | |
ACAAGCATTCATCAAGAAAT+TGG | + | chr7_4:31906903-31906922 | None:intergenic | 30.0% | |
TTCATAACATCAAGTGGTAT+AGG | + | chr7_4:31906928-31906947 | None:intergenic | 30.0% | |
!! | CATGATTAACTTGACACTTT+TGG | + | chr7_4:31907064-31907083 | None:intergenic | 30.0% |
!! | TTAGAATCAGGCTTTAGAAT+GGG | + | chr7_4:31907098-31907117 | None:intergenic | 30.0% |
!! | TTTAGAATCAGGCTTTAGAA+TGG | + | chr7_4:31907099-31907118 | None:intergenic | 30.0% |
TGTTGGAATGTGAGAATTAT+AGG | - | chr7_4:31907132-31907151 | Msa1149710:intron | 30.0% | |
!! | CACTCATTTTGCCTTTATTT+TGG | - | chr7_4:31907200-31907219 | Msa1149710:intron | 30.0% |
TAGGAAACAACCCAAAATAA+AGG | + | chr7_4:31907214-31907233 | None:intergenic | 30.0% | |
ATGAAATGGTTAGTAACACA+TGG | + | chr7_4:31907283-31907302 | None:intergenic | 30.0% | |
GTATGAGACATGAAATGAAA+TGG | + | chr7_4:31907297-31907316 | None:intergenic | 30.0% | |
AGATGGATATGGAATGAAAT+GGG | + | chr7_4:31907334-31907353 | None:intergenic | 30.0% | |
AAGATGGATATGGAATGAAA+TGG | + | chr7_4:31907335-31907354 | None:intergenic | 30.0% | |
TGCAAGAAATAAGATGGATA+TGG | + | chr7_4:31907345-31907364 | None:intergenic | 30.0% | |
AAGACCATAGAATGTAAACT+AGG | - | chr7_4:31907442-31907461 | Msa1149710:intron | 30.0% | |
AGACCATAGAATGTAAACTA+GGG | - | chr7_4:31907443-31907462 | Msa1149710:intron | 30.0% | |
GCATGTTTAGATGTATGTTT+AGG | - | chr7_4:31907558-31907577 | Msa1149710:intron | 30.0% | |
GAATTTGAAGAATAAGAGAG+AGG | + | chr7_4:31907816-31907835 | None:intergenic | 30.0% | |
ATTCTAAGTGAAGAATTGGA+GGG | + | chr7_4:31907983-31908002 | None:intergenic | 30.0% | |
TATTCTAAGTGAAGAATTGG+AGG | + | chr7_4:31907984-31908003 | None:intergenic | 30.0% | |
AGGTATTCTAAGTGAAGAAT+TGG | + | chr7_4:31907987-31908006 | None:intergenic | 30.0% | |
TCTTCACTTAGAATACCTTT+AGG | - | chr7_4:31907989-31908008 | Msa1149710:intron | 30.0% | |
TAACGACTATAGTATCCTAT+AGG | + | chr7_4:31908079-31908098 | None:intergenic | 30.0% | |
ATAGGATACTATAGTCGTTA+TGG | - | chr7_4:31908079-31908098 | Msa1149710:intron | 30.0% | |
TAGGATACTATAGTCGTTAT+GGG | - | chr7_4:31908080-31908099 | Msa1149710:intron | 30.0% | |
!! | TAAGATATCACCGGTTTAAA+AGG | - | chr7_4:31908188-31908207 | Msa1149710:intron | 30.0% |
! | TACGTTTGAACCTTTTAAAC+CGG | + | chr7_4:31908201-31908220 | None:intergenic | 30.0% |
!! | GTGTTTTATCTTGGTTTTTC+GGG | + | chr7_4:31908238-31908257 | None:intergenic | 30.0% |
! | ATATGGCTTTTGCAAATTCA+TGG | - | chr7_4:31908283-31908302 | Msa1149710:intron | 30.0% |
! | TATGGCTTTTGCAAATTCAT+GGG | - | chr7_4:31908284-31908303 | Msa1149710:intron | 30.0% |
ATCAAATATGCACAGATAGA+TGG | - | chr7_4:31908340-31908359 | Msa1149710:intron | 30.0% | |
ACAGATGAAGAATCTTTCAA+AGG | - | chr7_4:31908411-31908430 | Msa1149710:exon | 30.0% | |
AACAGTGACAACAATTCTGA+TGG | + | chr7_4:31901660-31901679 | None:intergenic | 35.0% | |
AGAATTGTTGTCACTGTTCT+TGG | - | chr7_4:31901662-31901681 | Msa1149710:CDS | 35.0% | |
GTTTCTACGGTTATTTGCAT+CGG | - | chr7_4:31902007-31902026 | Msa1149710:intron | 35.0% | |
ATACATAGGGACTTGACTTA+CGG | - | chr7_4:31902169-31902188 | Msa1149710:intron | 35.0% | |
AGGAATGTGATACAACTAGA+GGG | - | chr7_4:31902201-31902220 | Msa1149710:intron | 35.0% | |
TTGTCATGTAGGTACTAGTA+TGG | - | chr7_4:31902356-31902375 | Msa1149710:intron | 35.0% | |
GATCGAACTGAATGTGAAAA+TGG | - | chr7_4:31902436-31902455 | Msa1149710:intron | 35.0% | |
TCGAACTGAATGTGAAAATG+GGG | - | chr7_4:31902438-31902457 | Msa1149710:intron | 35.0% | |
TGAATGTGAAAATGGGGATT+TGG | - | chr7_4:31902444-31902463 | Msa1149710:intron | 35.0% | |
TGTGACTACAATGTGAAAAG+GGG | - | chr7_4:31902544-31902563 | Msa1149710:intron | 35.0% | |
AAACAGATGAACATCTCCAA+GGG | + | chr7_4:31902652-31902671 | None:intergenic | 35.0% | |
AAAACAGATGAACATCTCCA+AGG | + | chr7_4:31902653-31902672 | None:intergenic | 35.0% | |
! | GAGATGTTCATCTGTTTTGT+TGG | - | chr7_4:31902655-31902674 | Msa1149710:intron | 35.0% |
CAGAAACCAATCCATCTTAA+GGG | + | chr7_4:31902832-31902851 | None:intergenic | 35.0% | |
ACAGAAACCAATCCATCTTA+AGG | + | chr7_4:31902833-31902852 | None:intergenic | 35.0% | |
TACAATCCATTCTATCCCAA+GGG | + | chr7_4:31902856-31902875 | None:intergenic | 35.0% | |
CCAAGGAACAAGAAAACTAT+GGG | + | chr7_4:31902975-31902994 | None:intergenic | 35.0% | |
CAAGTTGCCACAATCATATT+TGG | - | chr7_4:31903175-31903194 | Msa1149710:intron | 35.0% | |
CATATTTGGATTCATTGCCA+AGG | - | chr7_4:31903189-31903208 | Msa1149710:intron | 35.0% | |
TCATGAAGGCTATGATTACA+CGG | - | chr7_4:31903283-31903302 | Msa1149710:intron | 35.0% | |
ATGGTACTTCAAAACAAGGT+AGG | - | chr7_4:31903616-31903635 | Msa1149710:intron | 35.0% | |
TGGTACTTCAAAACAAGGTA+GGG | - | chr7_4:31903617-31903636 | Msa1149710:intron | 35.0% | |
GTTTGATTGACTAGTGGAAA+TGG | - | chr7_4:31903826-31903845 | Msa1149710:intron | 35.0% | |
TTGTGGGAAGCAAGTTTATT+TGG | - | chr7_4:31903948-31903967 | Msa1149710:intron | 35.0% | |
TGTGGGAAGCAAGTTTATTT+GGG | - | chr7_4:31903949-31903968 | Msa1149710:intron | 35.0% | |
GTATGAGGAAGATATGAATC+AGG | - | chr7_4:31904121-31904140 | Msa1149710:intron | 35.0% | |
GTATGAGGAAGATATGAATC+AGG | - | chr7_4:31904121-31904140 | Msa1149710:intron | 35.0% | |
AAAAGACTAAAATGCCCCTA+GGG | + | chr7_4:31904677-31904696 | None:intergenic | 35.0% | |
TGTCTCTGAGTCTATCAAAT+TGG | - | chr7_4:31904730-31904749 | Msa1149710:intron | 35.0% | |
GGTCATTTCACACGAAATTT+CGG | - | chr7_4:31904846-31904865 | Msa1149710:intron | 35.0% | |
! | AACAGATGACTTGGACAAAA+TGG | + | chr7_4:31905046-31905065 | None:intergenic | 35.0% |
ACTAATGAGAACTTGACATG+TGG | + | chr7_4:31905121-31905140 | None:intergenic | 35.0% | |
! | GTTTATGAGTTGGCAGAAAA+TGG | + | chr7_4:31905254-31905273 | None:intergenic | 35.0% |
! | CATGTGATTTTCTGGGTTTT+TGG | + | chr7_4:31905319-31905338 | None:intergenic | 35.0% |
! | TGGTGTTCATGTGATTTTCT+GGG | + | chr7_4:31905326-31905345 | None:intergenic | 35.0% |
! | ATGGTGTTCATGTGATTTTC+TGG | + | chr7_4:31905327-31905346 | None:intergenic | 35.0% |
GAGTTCAAGAAATTCGGTTA+GGG | + | chr7_4:31905371-31905390 | None:intergenic | 35.0% | |
TGAGTTCAAGAAATTCGGTT+AGG | + | chr7_4:31905372-31905391 | None:intergenic | 35.0% | |
AGAGATTCTCAGATTCCATA+GGG | - | chr7_4:31905481-31905500 | Msa1149710:intron | 35.0% | |
AAACTGAACTAGAGAAGAAG+AGG | - | chr7_4:31905605-31905624 | Msa1149710:intron | 35.0% | |
! | GTTCTTGATTTGAAACCCTA+GGG | + | chr7_4:31905670-31905689 | None:intergenic | 35.0% |
GAATCAGATCAAGAATCGAA+AGG | - | chr7_4:31905720-31905739 | Msa1149710:intron | 35.0% | |
GAAAGAGATGATGAACTCTT+CGG | + | chr7_4:31905774-31905793 | None:intergenic | 35.0% | |
! | ACTCTTTTTAAACGACGCTT+TGG | + | chr7_4:31905925-31905944 | None:intergenic | 35.0% |
ACTTACGAATCAACGTAGAT+CGG | + | chr7_4:31905989-31906008 | None:intergenic | 35.0% | |
!!! | ACGTTGATTCGTAAGTCTTT+TGG | - | chr7_4:31905993-31906012 | Msa1149710:intron | 35.0% |
AGTGTAATTAGGTTTCCGTT+TGG | - | chr7_4:31906063-31906082 | Msa1149710:intron | 35.0% | |
GTGTAATTAGGTTTCCGTTT+GGG | - | chr7_4:31906064-31906083 | Msa1149710:intron | 35.0% | |
TGTAATTAGGTTTCCGTTTG+GGG | - | chr7_4:31906065-31906084 | Msa1149710:intron | 35.0% | |
! | TTGTAGAGAGAGAAGTGTAT+AGG | - | chr7_4:31906194-31906213 | Msa1149710:intron | 35.0% |
CCGTTAGATCAAAGATCTAA+CGG | + | chr7_4:31906315-31906334 | None:intergenic | 35.0% | |
CCGTTAGATCTTTGATCTAA+CGG | - | chr7_4:31906312-31906331 | Msa1149710:intron | 35.0% | |
CGAAAAAAAACAGTGACACA+AGG | + | chr7_4:31906485-31906504 | None:intergenic | 35.0% | |
!! | TAGGCTTCTTGATAGTTTTG+TGG | - | chr7_4:31906762-31906781 | Msa1149710:CDS | 35.0% |
!! | GCATGAGTGTGAATTTTGAT+TGG | - | chr7_4:31906979-31906998 | Msa1149710:intron | 35.0% |
!! | ACACTTTTGGAAGCAAACTT+AGG | + | chr7_4:31907051-31907070 | None:intergenic | 35.0% |
!! | AGGCTTTAGAATGGGAATTA+AGG | + | chr7_4:31907090-31907109 | None:intergenic | 35.0% |
AACACTATAGCACAAAGCAT+AGG | + | chr7_4:31907233-31907252 | None:intergenic | 35.0% | |
ATGCCCTAGTTTACATTCTA+TGG | + | chr7_4:31907449-31907468 | None:intergenic | 35.0% | |
TAAACTAGGGCATGATGTAA+AGG | - | chr7_4:31907456-31907475 | Msa1149710:intron | 35.0% | |
TGCAAAATGTGGTCTAAGTA+TGG | + | chr7_4:31907745-31907764 | None:intergenic | 35.0% | |
ATGGGATTATGAAAAGAGTG+AGG | + | chr7_4:31907783-31907802 | None:intergenic | 35.0% | |
AAGTTAAAGACGGTTCCTAT+AGG | - | chr7_4:31908061-31908080 | Msa1149710:intron | 35.0% | |
! | ATGGCTTTTGCAAATTCATG+GGG | - | chr7_4:31908285-31908304 | Msa1149710:intron | 35.0% |
GTGCATATTTGATGTCACAA+TGG | + | chr7_4:31908333-31908352 | None:intergenic | 35.0% | |
AGATAGATGGATCGTATGAT+GGG | - | chr7_4:31908353-31908372 | Msa1149710:intron | 35.0% | |
GATGAAGAATCTTTCAAAGG+AGG | - | chr7_4:31908414-31908433 | Msa1149710:exon | 35.0% | |
! | TTTTCAGTTGAGGCATGTGA+AGG | - | chr7_4:31901800-31901819 | Msa1149710:intron | 40.0% |
!!! | CATCGGTACCTTTGTTTTTC+TGG | - | chr7_4:31902024-31902043 | Msa1149710:intron | 40.0% |
GAGGAATGTGATACAACTAG+AGG | - | chr7_4:31902200-31902219 | Msa1149710:intron | 40.0% | |
! | ATTGGCAAGCTTTGTCATGT+AGG | - | chr7_4:31902345-31902364 | Msa1149710:intron | 40.0% |
GTGACTACAATGTGAAAAGG+GGG | - | chr7_4:31902545-31902564 | Msa1149710:intron | 40.0% | |
ACAATGTGAAAAGGGGGATT+TGG | - | chr7_4:31902551-31902570 | Msa1149710:intron | 40.0% | |
GTGACTACAATTATTGCCCT+TGG | - | chr7_4:31902633-31902652 | Msa1149710:intron | 40.0% | |
TTCTGTCCCTTAAGATGGAT+TGG | - | chr7_4:31902823-31902842 | Msa1149710:intron | 40.0% | |
CTACAATCCATTCTATCCCA+AGG | + | chr7_4:31902857-31902876 | None:intergenic | 40.0% | |
! | CCCATAGTTTTCTTGTTCCT+TGG | - | chr7_4:31902972-31902991 | Msa1149710:intron | 40.0% |
GCCAAGGAACAAGAAAACTA+TGG | + | chr7_4:31902976-31902995 | None:intergenic | 40.0% | |
CAAGTGGGCAAATTAACACA+AGG | + | chr7_4:31903093-31903112 | None:intergenic | 40.0% | |
GGTGTAATGCGAAACATACA+GGG | + | chr7_4:31903122-31903141 | None:intergenic | 40.0% | |
CATGAAGGCTATGATTACAC+GGG | - | chr7_4:31903284-31903303 | Msa1149710:intron | 40.0% | |
TCTCATGTTGCACATGTTTG+TGG | - | chr7_4:31903319-31903338 | Msa1149710:intron | 40.0% | |
TGTTGCACATGTTTGTGGTA+TGG | - | chr7_4:31903324-31903343 | Msa1149710:intron | 40.0% | |
ACTGAGGTTCGAGAGAAATT+GGG | - | chr7_4:31903510-31903529 | Msa1149710:intron | 40.0% | |
! | CATTTTATGAGGGAGGTGAA+CGG | - | chr7_4:31903572-31903591 | Msa1149710:intron | 40.0% |
! | ATTTTATGAGGGAGGTGAAC+GGG | - | chr7_4:31903573-31903592 | Msa1149710:intron | 40.0% |
! | AAACAAGGTAGGGACTTTTG+AGG | - | chr7_4:31903627-31903646 | Msa1149710:intron | 40.0% |
! | AACAAGGTAGGGACTTTTGA+GGG | - | chr7_4:31903628-31903647 | Msa1149710:intron | 40.0% |
CTTTATAGCAGCTCGATCAT+AGG | + | chr7_4:31904060-31904079 | None:intergenic | 40.0% | |
ATCGAGCTGCTATAAAGTTC+AGG | - | chr7_4:31904063-31904082 | Msa1149710:intron | 40.0% | |
TCGAGCTGCTATAAAGTTCA+GGG | - | chr7_4:31904064-31904083 | Msa1149710:intron | 40.0% | |
CTTTATAGCAGCTCGATCAT+AGG | + | chr7_4:31904060-31904079 | None:intergenic | 40.0% | |
ATCGAGCTGCTATAAAGTTC+AGG | - | chr7_4:31904063-31904082 | Msa1149710:intron | 40.0% | |
TCGAGCTGCTATAAAGTTCA+GGG | - | chr7_4:31904064-31904083 | Msa1149710:intron | 40.0% | |
AAAGACTAAAATGCCCCTAG+GGG | + | chr7_4:31904676-31904695 | None:intergenic | 40.0% | |
GAAAAGACTAAAATGCCCCT+AGG | + | chr7_4:31904678-31904697 | None:intergenic | 40.0% | |
AAGTACCTCATTTAGGCCAT+TGG | - | chr7_4:31904887-31904906 | Msa1149710:intron | 40.0% | |
!! | AACGGACTAAAACGAACCAA+TGG | + | chr7_4:31904906-31904925 | None:intergenic | 40.0% |
ACCAATACGAACATGACATG+TGG | + | chr7_4:31905170-31905189 | None:intergenic | 40.0% | |
! | TCTTGACCATTGATTGTGAC+TGG | + | chr7_4:31905224-31905243 | None:intergenic | 40.0% |
! | ATGAGTTGGCAGAAAATGGA+TGG | + | chr7_4:31905250-31905269 | None:intergenic | 40.0% |
TGAAGGTGGATGAACATTCA+TGG | + | chr7_4:31905346-31905365 | None:intergenic | 40.0% | |
GAAATTCGGTTAGGGTTTGA+AGG | + | chr7_4:31905363-31905382 | None:intergenic | 40.0% | |
CAGAGATTCTCAGATTCCAT+AGG | - | chr7_4:31905480-31905499 | Msa1149710:intron | 40.0% | |
! | TCGATGATGATGATTCCCTA+TGG | + | chr7_4:31905499-31905518 | None:intergenic | 40.0% |
!! | ATTTTGCTGTGATTCTGTGC+TGG | + | chr7_4:31905641-31905660 | None:intergenic | 40.0% |
! | ACAGCAAAATCTGAAACCCT+AGG | - | chr7_4:31905651-31905670 | Msa1149710:intron | 40.0% |
! | CAGCAAAATCTGAAACCCTA+GGG | - | chr7_4:31905652-31905671 | Msa1149710:intron | 40.0% |
! | GGTTCTTGATTTGAAACCCT+AGG | + | chr7_4:31905671-31905690 | None:intergenic | 40.0% |
GTTCATCATCTCTTTCGTTC+AGG | - | chr7_4:31905778-31905797 | Msa1149710:intron | 40.0% | |
AAAGGACGGGAAGAAGAATT+TGG | + | chr7_4:31905806-31905825 | None:intergenic | 40.0% | |
AAGAACGAACGAAGAAAGGA+CGG | + | chr7_4:31905820-31905839 | None:intergenic | 40.0% | |
CTTCGCAAATCAACGTAGAT+AGG | - | chr7_4:31905878-31905897 | Msa1149710:CDS | 40.0% | |
TTGGATCGATCCAATTGGAT+TGG | + | chr7_4:31906411-31906430 | None:intergenic | 40.0% | |
!! | TTTCTTGCTGTTTGCACCAT+AGG | - | chr7_4:31906517-31906536 | Msa1149710:intron | 40.0% |
ACATGCACACACATCACTTT+AGG | - | chr7_4:31907519-31907538 | Msa1149710:intron | 40.0% | |
!! | TCAATGGGATTTTGATCCCA+AGG | + | chr7_4:31907679-31907698 | None:intergenic | 40.0% |
! | ACCTCTTTGGAAGAGAACTA+CGG | - | chr7_4:31907874-31907893 | Msa1149710:CDS | 40.0% |
! | GGTGGATTTGATCCCTTAAA+CGG | - | chr7_4:31907895-31907914 | Msa1149710:CDS | 40.0% |
GTGGATTTGATCCCTTAAAC+GGG | - | chr7_4:31907896-31907915 | Msa1149710:CDS | 40.0% | |
ATGGGGACTCATCATGATTT+CGG | - | chr7_4:31908302-31908321 | Msa1149710:intron | 40.0% | |
CAGATAGATGGATCGTATGA+TGG | - | chr7_4:31908352-31908371 | Msa1149710:intron | 40.0% | |
GGAGTAACACTTCACAAATG+TGG | - | chr7_4:31908499-31908518 | Msa1149710:five_prime_UTR | 40.0% | |
ACTTCACAAATGTGGTCGTT+GGG | - | chr7_4:31908507-31908526 | Msa1149710:five_prime_UTR | 40.0% | |
!! | GCTAACTCACTGATTCTCGA+TGG | - | chr7_4:31901632-31901651 | Msa1149710:CDS | 45.0% |
TGGTTTCATAACCGATGTCG+CGG | - | chr7_4:31901682-31901701 | Msa1149710:CDS | 45.0% | |
TAGATACCTCAGCTCTCGAT+AGG | + | chr7_4:31901716-31901735 | None:intergenic | 45.0% | |
AACTCCTCAGCTGCATACAT+AGG | - | chr7_4:31902155-31902174 | Msa1149710:intron | 45.0% | |
ACTCCTCAGCTGCATACATA+GGG | - | chr7_4:31902156-31902175 | Msa1149710:intron | 45.0% | |
CTCTGTAGTGTTCCTTTGCA+TGG | + | chr7_4:31902274-31902293 | None:intergenic | 45.0% | |
CATGCAAAGGAACACTACAG+AGG | - | chr7_4:31902272-31902291 | Msa1149710:intron | 45.0% | |
AAAGGAACACTACAGAGGAG+AGG | - | chr7_4:31902277-31902296 | Msa1149710:intron | 45.0% | |
CCAACAGATCTATTATGCGG+AGG | + | chr7_4:31902312-31902331 | None:intergenic | 45.0% | |
CCTCCGCATAATAGATCTGT+TGG | - | chr7_4:31902309-31902328 | Msa1149710:intron | 45.0% | |
TAGATCTGTTGGAATCGCAG+AGG | - | chr7_4:31902320-31902339 | Msa1149710:intron | 45.0% | |
!! | ATGGATTGGTTTCTGTCCCT+TGG | - | chr7_4:31902837-31902856 | Msa1149710:intron | 45.0% |
!! | TGGATTGGTTTCTGTCCCTT+GGG | - | chr7_4:31902838-31902857 | Msa1149710:intron | 45.0% |
TTCTGTCCCTTGGGATAGAA+TGG | - | chr7_4:31902847-31902866 | Msa1149710:intron | 45.0% | |
GTGCTTTCAGCACCAACATT+AGG | + | chr7_4:31903033-31903052 | None:intergenic | 45.0% | |
CATACAGGGATCTGTCAAGT+GGG | + | chr7_4:31903108-31903127 | None:intergenic | 45.0% | |
ACATACAGGGATCTGTCAAG+TGG | + | chr7_4:31903109-31903128 | None:intergenic | 45.0% | |
GGGTGTAATGCGAAACATAC+AGG | + | chr7_4:31903123-31903142 | None:intergenic | 45.0% | |
TTGGATTCATTGCCAAGGGT+AGG | - | chr7_4:31903194-31903213 | Msa1149710:intron | 45.0% | |
ATGTGACAGAATCCTACCCT+TGG | + | chr7_4:31903209-31903228 | None:intergenic | 45.0% | |
CACATGTTTGTGGTATGGTG+TGG | - | chr7_4:31903329-31903348 | Msa1149710:intron | 45.0% | |
GTTTGTGGTATGGTGTGGAT+CGG | - | chr7_4:31903334-31903353 | Msa1149710:intron | 45.0% | |
TATGGTGTGGATCGGATTGA+TGG | - | chr7_4:31903342-31903361 | Msa1149710:intron | 45.0% | |
GACTGAGGTTCGAGAGAAAT+TGG | - | chr7_4:31903509-31903528 | Msa1149710:intron | 45.0% | |
AGTGTGCTTATATGTAGGGG+AGG | - | chr7_4:31903749-31903768 | Msa1149710:intron | 45.0% | |
CGAGCTGCTATAAAGTTCAG+GGG | - | chr7_4:31904065-31904084 | Msa1149710:intron | 45.0% | |
CGAGCTGCTATAAAGTTCAG+GGG | - | chr7_4:31904065-31904084 | Msa1149710:intron | 45.0% | |
! | TTTGAGTCAGTTTTGCCCCT+AGG | - | chr7_4:31904658-31904677 | Msa1149710:intron | 45.0% |
! | TTGAGTCAGTTTTGCCCCTA+GGG | - | chr7_4:31904659-31904678 | Msa1149710:intron | 45.0% |
!! | TTTTTAGGCGTTTTAGCCCC+AGG | - | chr7_4:31904815-31904834 | Msa1149710:intron | 45.0% |
!! | TTTTAGGCGTTTTAGCCCCA+GGG | - | chr7_4:31904816-31904835 | Msa1149710:intron | 45.0% |
AAATGACCAAAATGCCCCTG+GGG | + | chr7_4:31904834-31904853 | None:intergenic | 45.0% | |
GAAATGACCAAAATGCCCCT+GGG | + | chr7_4:31904835-31904854 | None:intergenic | 45.0% | |
TGAAATGACCAAAATGCCCC+TGG | + | chr7_4:31904836-31904855 | None:intergenic | 45.0% | |
ACGAACCAATGGCCTAAATG+AGG | + | chr7_4:31904895-31904914 | None:intergenic | 45.0% | |
CGTGTACAGAACAGATGACT+TGG | + | chr7_4:31905055-31905074 | None:intergenic | 45.0% | |
GCCACATGTCATGTTCGTAT+TGG | - | chr7_4:31905166-31905185 | Msa1149710:intron | 45.0% | |
TAGCTGATGTGCATGACTGT+TGG | + | chr7_4:31905193-31905212 | None:intergenic | 45.0% | |
ATTCGGTTAGGGTTTGAAGG+TGG | + | chr7_4:31905360-31905379 | None:intergenic | 45.0% | |
TTCCTGCAATTCGAACCACA+AGG | - | chr7_4:31905531-31905550 | Msa1149710:intron | 45.0% | |
!! | GTGCTTTTGCGTTGATGCTT+CGG | + | chr7_4:31905692-31905711 | None:intergenic | 45.0% |
AGAGATGATGAACTCTTCGG+AGG | + | chr7_4:31905771-31905790 | None:intergenic | 45.0% | |
AGAACGAACGAAGAAAGGAC+GGG | + | chr7_4:31905819-31905838 | None:intergenic | 45.0% | |
TGCGAAGAACGAACGAAGAA+AGG | + | chr7_4:31905824-31905843 | None:intergenic | 45.0% | |
CGTTCGTTCTTCGCAAATCA+TGG | - | chr7_4:31905829-31905848 | Msa1149710:CDS | 45.0% | |
CGCAAATCAACGTAGATAGG+AGG | - | chr7_4:31905881-31905900 | Msa1149710:CDS | 45.0% | |
CTAGCTTCAGAATCGAAGAG+AGG | - | chr7_4:31906021-31906040 | Msa1149710:CDS | 45.0% | |
GGAGAAGTGAAGAAGATGAC+CGG | - | chr7_4:31906124-31906143 | Msa1149710:intron | 45.0% | |
TCTAACGGCTCAAGCAAAAG+AGG | + | chr7_4:31906300-31906319 | None:intergenic | 45.0% | |
GATCCTGGATCCAATCCAAT+TGG | - | chr7_4:31906398-31906417 | Msa1149710:intron | 45.0% | |
! | GATCCAATTGGATTGGATCC+AGG | + | chr7_4:31906404-31906423 | None:intergenic | 45.0% |
GATCGTTGGATCGATCCAAT+TGG | + | chr7_4:31906416-31906435 | None:intergenic | 45.0% | |
! | GGAAGATCCGTTTTCACCTT+GGG | - | chr7_4:31906447-31906466 | Msa1149710:intron | 45.0% |
! | ATCCGTTTTCACCTTGGGTA+TGG | - | chr7_4:31906452-31906471 | Msa1149710:intron | 45.0% |
! | TCCGTTTTCACCTTGGGTAT+GGG | - | chr7_4:31906453-31906472 | Msa1149710:intron | 45.0% |
! | GGCGTAAAAAGCATGTCCTA+TGG | + | chr7_4:31906536-31906555 | None:intergenic | 45.0% |
GGGCATGATGTAAAGGACAA+TGG | - | chr7_4:31907463-31907482 | Msa1149710:intron | 45.0% | |
AGTGATGTGTGTGCATGTGT+CGG | + | chr7_4:31907517-31907536 | None:intergenic | 45.0% | |
TTCATAATCCCATGCCCTTG+AGG | - | chr7_4:31907790-31907809 | Msa1149710:CDS | 45.0% | |
GAATAAGAGAGAGGCCTCAA+GGG | + | chr7_4:31907807-31907826 | None:intergenic | 45.0% | |
AGAATAAGAGAGAGGCCTCA+AGG | + | chr7_4:31907808-31907827 | None:intergenic | 45.0% | |
ACCGTAGTTCTCTTCCAAAG+AGG | + | chr7_4:31907878-31907897 | None:intergenic | 45.0% | |
! | TCTTTGGAAGAGAACTACGG+TGG | - | chr7_4:31907877-31907896 | Msa1149710:CDS | 45.0% |
TTGCCTACGTACCCGTTTAA+GGG | + | chr7_4:31907910-31907929 | None:intergenic | 45.0% | |
!! | TTCGGGAGTTGTTTTCGCTA+CGG | + | chr7_4:31908120-31908139 | None:intergenic | 45.0% |
AACCCTTGAGAATCGAGGTT+CGG | + | chr7_4:31908138-31908157 | None:intergenic | 45.0% | |
AGCAAAACCCTTGAGAATCG+AGG | + | chr7_4:31908143-31908162 | None:intergenic | 45.0% | |
CCACAGTAACGGTTTCTCAA+GGG | - | chr7_4:31908459-31908478 | Msa1149710:five_prime_UTR | 45.0% | |
CACAGTAACGGTTTCTCAAG+GGG | - | chr7_4:31908460-31908479 | Msa1149710:five_prime_UTR | 45.0% | |
ACAGTAACGGTTTCTCAAGG+GGG | - | chr7_4:31908461-31908480 | Msa1149710:five_prime_UTR | 45.0% | |
AGGGGGAGTTCAAAATACAG+AGG | - | chr7_4:31908478-31908497 | Msa1149710:five_prime_UTR | 45.0% | |
CACTTCACAAATGTGGTCGT+TGG | - | chr7_4:31908506-31908525 | Msa1149710:five_prime_UTR | 45.0% | |
!! | AAAATAAAATGAATTAAAAT+TGG | + | chr7_4:31904972-31904991 | None:intergenic | 5.0% |
!!! | AATTTTTACATATTAAAAAT+TGG | - | chr7_4:31906796-31906815 | Msa1149710:CDS | 5.0% |
AGTCCCTATGTATGCAGCTG+AGG | + | chr7_4:31902162-31902181 | None:intergenic | 50.0% | |
CATAGGGACTTGACTTACGG+TGG | - | chr7_4:31902172-31902191 | Msa1149710:intron | 50.0% | |
TTGACTTACGGTGGCAGAAG+AGG | - | chr7_4:31902181-31902200 | Msa1149710:intron | 50.0% | |
GTCTGAGAACAGCCATGCAA+AGG | - | chr7_4:31902259-31902278 | Msa1149710:intron | 50.0% | |
CAGATCTATTATGCGGAGGC+AGG | + | chr7_4:31902308-31902327 | None:intergenic | 50.0% | |
GTTGGAATCGCAGAGGAGAT+TGG | - | chr7_4:31902327-31902346 | Msa1149710:intron | 50.0% | |
! | TGAGTCAGTTTTGCCCCTAG+GGG | - | chr7_4:31904660-31904679 | Msa1149710:intron | 50.0% |
!! | TTTAGGCGTTTTAGCCCCAG+GGG | - | chr7_4:31904817-31904836 | Msa1149710:intron | 50.0% |
!!! | TTTTAGCCCCAGGGGCATTT+TGG | - | chr7_4:31904825-31904844 | Msa1149710:intron | 50.0% |
CACGAAATTTCGGCAGAGAG+AGG | - | chr7_4:31904856-31904875 | Msa1149710:intron | 50.0% | |
GAGAACTTGACATGTGGCCT+GGG | + | chr7_4:31905115-31905134 | None:intergenic | 50.0% | |
TGAGAACTTGACATGTGGCC+TGG | + | chr7_4:31905116-31905135 | None:intergenic | 50.0% | |
CACCTTGTGGTTCGAATTGC+AGG | + | chr7_4:31905536-31905555 | None:intergenic | 50.0% | |
GCTTCAGAATCGAAGAGAGG+AGG | - | chr7_4:31906024-31906043 | Msa1149710:CDS | 50.0% | |
TCTTCTTCACTTCTCCGACG+CGG | + | chr7_4:31906120-31906139 | None:intergenic | 50.0% | |
TGAAGAAGATGACCGGCGTT+AGG | - | chr7_4:31906131-31906150 | Msa1149710:intron | 50.0% | |
AGGTCAACACCTCAAGCCAT+GGG | + | chr7_4:31906352-31906371 | None:intergenic | 50.0% | |
TCAAACATGTGCCAGCACAC+AGG | + | chr7_4:31906372-31906391 | None:intergenic | 50.0% | |
!! | CATGTTTGAGCGTTGGATCC+TGG | - | chr7_4:31906383-31906402 | Msa1149710:intron | 50.0% |
GGTGAAAACGGATCTTCCGA+AGG | + | chr7_4:31906445-31906464 | None:intergenic | 50.0% | |
! | CGGAAGATCCGTTTTCACCT+TGG | - | chr7_4:31906446-31906465 | Msa1149710:intron | 50.0% |
GCCCATACCCAAGGTGAAAA+CGG | + | chr7_4:31906457-31906476 | None:intergenic | 50.0% | |
AAAACAGTGACACAAGGCCC+AGG | + | chr7_4:31906479-31906498 | None:intergenic | 50.0% | |
GATCCCTTAAACGGGTACGT+AGG | - | chr7_4:31907904-31907923 | Msa1149710:CDS | 50.0% | |
CTTGCCTACGTACCCGTTTA+AGG | + | chr7_4:31907911-31907930 | None:intergenic | 50.0% | |
CTTAAACGGGTACGTAGGCA+AGG | - | chr7_4:31907909-31907928 | Msa1149710:CDS | 50.0% | |
GCGCGCGTAGAAGTTAAAGA+CGG | - | chr7_4:31908051-31908070 | Msa1149710:intron | 50.0% | |
!! | TTTCGCTACGGGAAGGTGTT+AGG | + | chr7_4:31908108-31908127 | None:intergenic | 50.0% |
!! | GAGTTGTTTTCGCTACGGGA+AGG | + | chr7_4:31908115-31908134 | None:intergenic | 50.0% |
!! | TCGGGAGTTGTTTTCGCTAC+GGG | + | chr7_4:31908119-31908138 | None:intergenic | 50.0% |
TCCCGAACCTCGATTCTCAA+GGG | - | chr7_4:31908133-31908152 | Msa1149710:intron | 50.0% | |
ACCCTTGAGAATCGAGGTTC+GGG | + | chr7_4:31908137-31908156 | None:intergenic | 50.0% | |
ATTCTCCGTCGCCACAGTAA+CGG | - | chr7_4:31908448-31908467 | Msa1149710:five_prime_UTR | 50.0% | |
AGAAACCGTTACTGTGGCGA+CGG | + | chr7_4:31908456-31908475 | None:intergenic | 50.0% | |
GCCACAGTAACGGTTTCTCA+AGG | - | chr7_4:31908458-31908477 | Msa1149710:five_prime_UTR | 50.0% | |
CCCTTGAGAAACCGTTACTG+TGG | + | chr7_4:31908462-31908481 | None:intergenic | 50.0% | |
TGGTCGTTGGGAAGCTAGAA+TGG | - | chr7_4:31908519-31908538 | Msa1149710:five_prime_UTR | 50.0% | |
GGTCGTTGGGAAGCTAGAAT+GGG | - | chr7_4:31908520-31908539 | Msa1149710:five_prime_UTR | 50.0% | |
GCTAGAATGGGACAACTCCT+TGG | - | chr7_4:31908532-31908551 | Msa1149710:five_prime_UTR | 50.0% | |
AGGTTGCGAAACCGCGACAT+CGG | + | chr7_4:31901696-31901715 | None:intergenic | 55.0% | |
TCGCAACCTATCGAGAGCTG+AGG | - | chr7_4:31901707-31901726 | Msa1149710:intron | 55.0% | |
GAAGATGACCGGCGTTAGGT+CGG | - | chr7_4:31906135-31906154 | Msa1149710:intron | 55.0% | |
TCTCTTCTCCGACCTAACGC+CGG | + | chr7_4:31906146-31906165 | None:intergenic | 55.0% | |
CATGCACACAGGATCAGGCA+TGG | + | chr7_4:31906257-31906276 | None:intergenic | 55.0% | |
GCACACATGCACACAGGATC+AGG | + | chr7_4:31906262-31906281 | None:intergenic | 55.0% | |
AACGGAGCACACATGCACAC+AGG | + | chr7_4:31906268-31906287 | None:intergenic | 55.0% | |
CAACACCTCAAGCCATGGGA+GGG | + | chr7_4:31906348-31906367 | None:intergenic | 55.0% | |
TCAACACCTCAAGCCATGGG+AGG | + | chr7_4:31906349-31906368 | None:intergenic | 55.0% | |
CAGGTCAACACCTCAAGCCA+TGG | + | chr7_4:31906353-31906372 | None:intergenic | 55.0% | |
!! | TGAGGTGTTGACCTGTGTGC+TGG | - | chr7_4:31906358-31906377 | Msa1149710:intron | 55.0% |
GCTGGCACATGTTTGAGCGT+TGG | - | chr7_4:31906376-31906395 | Msa1149710:intron | 55.0% | |
TCCAACGATCCCTGTGCCTT+CGG | - | chr7_4:31906426-31906445 | Msa1149710:intron | 55.0% | |
! | ACGGATCTTCCGAAGGCACA+GGG | + | chr7_4:31906438-31906457 | None:intergenic | 55.0% |
! | AACGGATCTTCCGAAGGCAC+AGG | + | chr7_4:31906439-31906458 | None:intergenic | 55.0% |
TTTCACCTTGGGTATGGGCC+TGG | - | chr7_4:31906458-31906477 | Msa1149710:intron | 55.0% | |
TTCACCTTGGGTATGGGCCT+GGG | - | chr7_4:31906459-31906478 | Msa1149710:intron | 55.0% | |
! | GCATGTGTCGGTGCTTGTGT+CGG | + | chr7_4:31907505-31907524 | None:intergenic | 55.0% |
CTCCCGAACCTCGATTCTCA+AGG | - | chr7_4:31908132-31908151 | Msa1149710:intron | 55.0% | |
TCTTCACTTCTCCGACGCGG+TGG | + | chr7_4:31906117-31906136 | None:intergenic | 60.0% | |
GGCTACTGTGAACCCTCCCA+TGG | - | chr7_4:31906333-31906352 | Msa1149710:intron | 60.0% | |
GTGAACCCTCCCATGGCTTG+AGG | - | chr7_4:31906340-31906359 | Msa1149710:intron | 60.0% | |
! | TCCGAAGGCACAGGGATCGT+TGG | + | chr7_4:31906430-31906449 | None:intergenic | 60.0% |
! | GAGAGAGGCCTCAAGGGCAT+GGG | + | chr7_4:31907801-31907820 | None:intergenic | 60.0% |
AGAGAGAGGCCTCAAGGGCA+TGG | + | chr7_4:31907802-31907821 | None:intergenic | 60.0% | |
! | TTCCGTTTGGGGCTCCGACG+CGG | - | chr7_4:31906076-31906095 | Msa1149710:intron | 65.0% |
AAGGCCCAGGCCCATACCCA+AGG | + | chr7_4:31906466-31906485 | None:intergenic | 65.0% | |
CACTTCTCCGACGCGGTGGC+CGG | + | chr7_4:31906113-31906132 | None:intergenic | 70.0% | |
CGCCGCGTCGGAGCCCCAAA+CGG | + | chr7_4:31906081-31906100 | None:intergenic | 75.0% | |
! | CGTTTGGGGCTCCGACGCGG+CGG | - | chr7_4:31906079-31906098 | Msa1149710:intron | 75.0% |
TTCTCCGACGCGGTGGCCGG+TGG | + | chr7_4:31906110-31906129 | None:intergenic | 75.0% | |
! | GCCACCACCGGCCACCGCGT+CGG | - | chr7_4:31906103-31906122 | Msa1149710:intron | 80.0% |
! | TCCGACGCGGTGGCCGGTGG+TGG | + | chr7_4:31906107-31906126 | None:intergenic | 80.0% |
!! | CGGTGGTGGCGCCGCCGCGT+CGG | + | chr7_4:31906093-31906112 | None:intergenic | 85.0% |
! | CGACGCGGCGGCGCCACCAC+CGG | - | chr7_4:31906091-31906110 | Msa1149710:intron | 85.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7_4 | gene | 31901561 | 31908564 | 31901561 | ID=Msa1149710;Name=Msa1149710 |
chr7_4 | mRNA | 31901561 | 31908564 | 31901561 | ID=Msa1149710-mRNA-1;Parent=Msa1149710;Name=Msa1149710-mRNA-1;_AED=0.47;_eAED=0.77;_QI=135|0|0.12|0.5|0.57|0.87|8|0|210 |
chr7_4 | exon | 31901561 | 31901710 | 31901561 | ID=Msa1149710-mRNA-1:exon:7668;Parent=Msa1149710-mRNA-1 |
chr7_4 | exon | 31905816 | 31905903 | 31905816 | ID=Msa1149710-mRNA-1:exon:7667;Parent=Msa1149710-mRNA-1 |
chr7_4 | exon | 31906005 | 31906070 | 31906005 | ID=Msa1149710-mRNA-1:exon:7666;Parent=Msa1149710-mRNA-1 |
chr7_4 | exon | 31906155 | 31906180 | 31906155 | ID=Msa1149710-mRNA-1:exon:7665;Parent=Msa1149710-mRNA-1 |
chr7_4 | exon | 31906610 | 31906615 | 31906610 | ID=Msa1149710-mRNA-1:exon:7664;Parent=Msa1149710-mRNA-1 |
chr7_4 | exon | 31906757 | 31906834 | 31906757 | ID=Msa1149710-mRNA-1:exon:7663;Parent=Msa1149710-mRNA-1 |
chr7_4 | exon | 31907763 | 31907948 | 31907763 | ID=Msa1149710-mRNA-1:exon:7662;Parent=Msa1149710-mRNA-1 |
chr7_4 | exon | 31908397 | 31908564 | 31908397 | ID=Msa1149710-mRNA-1:exon:7661;Parent=Msa1149710-mRNA-1 |
chr7_4 | five_prime_UTR | 31908430 | 31908564 | 31908430 | ID=Msa1149710-mRNA-1:five_prime_utr;Parent=Msa1149710-mRNA-1 |
chr7_4 | CDS | 31908397 | 31908429 | 31908397 | ID=Msa1149710-mRNA-1:cds;Parent=Msa1149710-mRNA-1 |
chr7_4 | CDS | 31907763 | 31907948 | 31907763 | ID=Msa1149710-mRNA-1:cds;Parent=Msa1149710-mRNA-1 |
chr7_4 | CDS | 31906757 | 31906834 | 31906757 | ID=Msa1149710-mRNA-1:cds;Parent=Msa1149710-mRNA-1 |
chr7_4 | CDS | 31906610 | 31906615 | 31906610 | ID=Msa1149710-mRNA-1:cds;Parent=Msa1149710-mRNA-1 |
chr7_4 | CDS | 31906155 | 31906180 | 31906155 | ID=Msa1149710-mRNA-1:cds;Parent=Msa1149710-mRNA-1 |
chr7_4 | CDS | 31906005 | 31906070 | 31906005 | ID=Msa1149710-mRNA-1:cds;Parent=Msa1149710-mRNA-1 |
chr7_4 | CDS | 31905816 | 31905903 | 31905816 | ID=Msa1149710-mRNA-1:cds;Parent=Msa1149710-mRNA-1 |
chr7_4 | CDS | 31901561 | 31901710 | 31901561 | ID=Msa1149710-mRNA-1:cds;Parent=Msa1149710-mRNA-1 |
Gene Sequence |
Protein sequence |