AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1241570


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1241570 MtrunA17_Chr8g0354221 97.115 624 17 1 1 623 1 624 0.0 1261
Msa1241570 MtrunA17_Chr5g0441221 38.667 675 313 20 18 621 17 661 2.87e-115 358
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1241570 AT2G26920.1 35.460 674 311 24 18 619 22 643 4.09e-81 269
Msa1241570 AT5G12120.1 51.128 266 112 5 1 256 1 258 1.01e-69 238

Find 152 sgRNAs with CRISPR-Local

Find 330 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAGAATATTCCCATGTATT+TGG 0.095875 8_2:+25263405 Msa1241570:CDS
AGGAAAAGTAACAAACTTTC+TGG 0.229668 8_2:-25263907 None:intergenic
CGTCTGCTGGTTTGCGAGAT+TGG 0.244262 8_2:+25263847 Msa1241570:CDS
ACATGGGAATATTCTTTATA+AGG 0.275764 8_2:-25263399 None:intergenic
TCTAATAACGGCAGTTGTTC+TGG 0.279190 8_2:+25262316 Msa1241570:CDS
TGTTCCATGATCCTGAAAAT+AGG 0.320132 8_2:+25262977 Msa1241570:CDS
AAGAATATTCCCATGTATTT+GGG 0.321676 8_2:+25263406 Msa1241570:CDS
TTGGCTGTTGTCATTAACTA+TGG 0.321935 8_2:-25262221 None:intergenic
TTAGTAGATCCGGAAGTCTT+TGG 0.322942 8_2:-25262136 None:intergenic
CTCTCCTTTCCCTCTGTCTC+TGG 0.344034 8_2:-25262453 None:intergenic
ATGGATTGTAACATATTAGA+AGG 0.352212 8_2:-25263078 None:intergenic
TGAGAAACAACGCCGGGAAT+AGG 0.355492 8_2:+25263766 Msa1241570:CDS
TCGAGATCGCACGCACTAGA+AGG 0.367011 8_2:-25262175 None:intergenic
AACATATTAGAAGGATTTGA+TGG 0.388055 8_2:-25263069 None:intergenic
CTTACAGTTCCACCTTCCCT+TGG 0.389072 8_2:+25263570 Msa1241570:CDS
AGGCACAGCCGAGTGCCTTT+AGG 0.397963 8_2:+25263130 Msa1241570:CDS
TACATACCAACTAGATGTTC+CGG 0.406942 8_2:-25263268 None:intergenic
TATGATTCTGTTTCTAATAA+CGG 0.410813 8_2:+25262304 Msa1241570:CDS
TCACACGTGGATTGGAATAC+CGG 0.418767 8_2:+25263642 Msa1241570:CDS
TGCAGCCTTCGCCTTCGACT+TGG 0.424604 8_2:-25262092 None:intergenic
AATGTCACCGTATGTTAAAA+TGG 0.428913 8_2:+25263107 Msa1241570:CDS
AGAACTGGCCATCCTATTCC+CGG 0.430476 8_2:-25263778 None:intergenic
TAATAGTTCGATGAGATCTC+AGG 0.433345 8_2:+25262870 Msa1241570:CDS
CGGCAGTTGTTCTGGTGAAT+CGG 0.434328 8_2:+25262324 Msa1241570:CDS
TTACAGTTCCACCTTCCCTT+GGG 0.436626 8_2:+25263571 Msa1241570:CDS
TAGCCATACATCACCTGATC+TGG 0.442603 8_2:-25263727 None:intergenic
TTGGTATGTAAATAGTGTTC+CGG 0.444465 8_2:+25263281 Msa1241570:CDS
GCTTGAACAAATTTATGCTC+TGG 0.448008 8_2:+25262708 Msa1241570:CDS
TGAGACTGAGAAGGCATTGT+AGG 0.450251 8_2:-25263501 None:intergenic
CGATCCAGTCATATAAGAAC+TGG 0.453454 8_2:-25263793 None:intergenic
ATGAACTGACACAGAAAAGA+TGG 0.455206 8_2:+25263031 Msa1241570:CDS
TCAAATTACCATCGCTTACA+AGG 0.456736 8_2:-25262666 None:intergenic
GCTCACATTCACACGTGGAT+TGG 0.460592 8_2:+25263634 Msa1241570:CDS
CAAAGCCAACGTTGCTCGCT+CGG 0.460956 8_2:-25262566 None:intergenic
TTCAATCTCATCAGGTGGAA+TGG 0.464377 8_2:+25263440 Msa1241570:CDS
AAGACTTCTCCAAAGACTTC+CGG 0.464853 8_2:+25262127 Msa1241570:CDS
TCGACTACAACAATATAGAT+TGG 0.471505 8_2:+25263682 Msa1241570:CDS
CATCCAGATCAGGTGATGTA+TGG 0.472343 8_2:+25263724 Msa1241570:CDS
TCAATCTCATCAGGTGGAAT+GGG 0.472852 8_2:+25263441 Msa1241570:CDS
AATCTGCCGGCCCAAATACA+TGG 0.476192 8_2:-25263416 None:intergenic
CATTCTTCCGTCGTTCCTAA+AGG 0.476672 8_2:-25263145 None:intergenic
TCAAGGAGTAGGAAGGGAAC+AGG 0.480070 8_2:+25263173 Msa1241570:CDS
ATACGGTGACATTGCTTGCA+TGG 0.482137 8_2:-25263097 None:intergenic
AAAACTTGTGCAGAAGTTAG+TGG 0.483211 8_2:+25262528 Msa1241570:CDS
TCTATGAATTCCATACCTTC+CGG 0.483583 8_2:+25263249 Msa1241570:CDS
GCAGATTCTTCAATCTCATC+AGG 0.484175 8_2:+25263432 Msa1241570:CDS
GCTCTCATCATTAGTAGATC+CGG 0.484784 8_2:-25262146 None:intergenic
GAAGGTGGAACTGTAAGTGC+AGG 0.489811 8_2:-25263564 None:intergenic
GGAAAAGTAACAAACTTTCT+GGG 0.491339 8_2:-25263906 None:intergenic
AGGGAAATTTCATCGTCTGC+TGG 0.494304 8_2:+25263834 Msa1241570:CDS
ACGAAAATACAAGGTCGAAT+GGG 0.496043 8_2:+25263307 Msa1241570:CDS
TTCCGTGAGCCGTGATGTTG+AGG 0.498017 8_2:-25263525 None:intergenic
ACTAGATGTTCCGGAAGGTA+TGG 0.498200 8_2:-25263259 None:intergenic
TGCCCTCCGTCATCCAGATC+AGG 0.498794 8_2:+25263714 Msa1241570:CDS
GCTTCCTCTCATTCTTCAGT+CGG 0.502524 8_2:-25262429 None:intergenic
AGGAAGAATCTCATTTGAAT+CGG 0.506944 8_2:+25262827 Msa1241570:CDS
AATATGTCCTTCCCAGCAAA+AGG 0.507323 8_2:-25263876 None:intergenic
TGTGCAGAAGTTAGTGGCGA+TGG 0.510221 8_2:+25262534 Msa1241570:CDS
CTGTGAAGGTGATCTTCAAA+AGG 0.517565 8_2:+25262780 Msa1241570:CDS
ATGGCCAGTTCTTATATGAC+TGG 0.522911 8_2:+25263789 Msa1241570:CDS
CACACGTGGATTGGAATACC+GGG 0.523779 8_2:+25263643 Msa1241570:CDS
AGCACCAGAGACAGAGGGAA+AGG 0.524230 8_2:+25262449 Msa1241570:CDS
ATTACCATCGCTTACAAGGT+TGG 0.525468 8_2:-25262662 None:intergenic
TACGAAAATACAAGGTCGAA+TGG 0.529380 8_2:+25263306 Msa1241570:CDS
ACCCTCAACATCACGGCTCA+CGG 0.530298 8_2:+25263523 Msa1241570:CDS
TACCTTCCGGAACATCTAGT+TGG 0.530968 8_2:+25263262 Msa1241570:CDS
GTGCGATCTCGAAACATCAT+TGG 0.535814 8_2:+25262186 Msa1241570:CDS
TCGATATCGTGGCTATTTGA+AGG 0.535817 8_2:+25262616 Msa1241570:CDS
ACTCGGTTGGAATTTATACC+TGG 0.536492 8_2:+25262379 Msa1241570:CDS
CAAAAGAGCCCAAGGGAAGG+TGG 0.537570 8_2:-25263579 None:intergenic
ATGACTGGATCGCGAAATGT+TGG 0.538183 8_2:+25263804 Msa1241570:CDS
TTATGATCCCATTACTACAT+AGG 0.546728 8_2:-25263930 None:intergenic
TGAACTGACACAGAAAAGAT+GGG 0.548313 8_2:+25263032 Msa1241570:CDS
GTCGAAGGCGAAGGCTGCAA+AGG 0.548842 8_2:+25262096 Msa1241570:CDS
ATATTCCCATGTATTTGGGC+CGG 0.551558 8_2:+25263410 Msa1241570:CDS
GTGCAGAAGTTAGTGGCGAT+GGG 0.551834 8_2:+25262535 Msa1241570:CDS
CGTCGTTGAGAAACAACGCC+GGG 0.551988 8_2:+25263760 Msa1241570:CDS
ATCTCATCAGGTGGAATGGG+AGG 0.552551 8_2:+25263444 Msa1241570:CDS
TGCAAACTCATCTACTCGGT+TGG 0.552784 8_2:+25262366 Msa1241570:CDS
ACTACTACAAAATCATGGCA+TGG 0.554523 8_2:+25263335 Msa1241570:CDS
AATTTACTACTACAAAATCA+TGG 0.562396 8_2:+25263330 Msa1241570:CDS
AATCATGGCATGGGAAATGT+CGG 0.563598 8_2:+25263345 Msa1241570:CDS
TGTTTGGCATCGGCGAATTG+TGG 0.563782 8_2:-25263213 None:intergenic
CTACTACAAAATCATGGCAT+GGG 0.564200 8_2:+25263336 Msa1241570:CDS
CACTACCGAGCGAGCAACGT+TGG 0.564651 8_2:+25262561 Msa1241570:CDS
ATCTGCCGGCCCAAATACAT+GGG 0.568471 8_2:-25263415 None:intergenic
AGAATGATTCATCAAGGAGT+AGG 0.573842 8_2:+25263162 Msa1241570:CDS
AAGCATGTTAAAATCTCAGA+AGG 0.573985 8_2:+25262807 Msa1241570:CDS
GATCATTCTATTAGTCCTCA+AGG 0.577446 8_2:+25262268 Msa1241570:CDS
GAATTCTTGCACCATGCCCC+CGG 0.581487 8_2:-25263661 None:intergenic
CTGGTTGTGATAACGACAGA+AGG 0.581636 8_2:+25262398 Msa1241570:CDS
TCCGTGAGCCGTGATGTTGA+GGG 0.582113 8_2:-25263524 None:intergenic
TTCTATTAGTCCTCAAGGAA+CGG 0.582220 8_2:+25262273 Msa1241570:CDS
GCGAAATGTTGGCACGGCAA+GGG 0.583876 8_2:+25263815 Msa1241570:CDS
GAGCTTGAGAAAGTTGCTGC+AGG 0.584773 8_2:-25263377 None:intergenic
TGATTCATCAAGGAGTAGGA+AGG 0.585649 8_2:+25263166 Msa1241570:CDS
AGAGGAAGCACCAGAGACAG+AGG 0.586818 8_2:+25262443 Msa1241570:CDS
AGATCAGGTGATGTATGGCT+AGG 0.589748 8_2:+25263729 Msa1241570:CDS
AAAATCCAAGTCGAAGGCGA+AGG 0.590839 8_2:+25262087 Msa1241570:CDS
TTGCGGTCATCAGAATCCAT+CGG 0.592019 8_2:+25263599 Msa1241570:CDS
GATGAGATTGAAGAATCTGC+CGG 0.594518 8_2:-25263429 None:intergenic
CAGTATCAATACAGCAGAGA+GGG 0.594892 8_2:+25262908 Msa1241570:CDS
GGGAGGTTTCTATAAACCGA+TGG 0.598021 8_2:+25263461 Msa1241570:CDS
CCGTCGTTCCTAAAGGCACT+CGG 0.598969 8_2:-25263138 None:intergenic
GAAATCAAAATCCAAGTCGA+AGG 0.599824 8_2:+25262081 Msa1241570:CDS
GATGACCGCAAAAGAGCCCA+AGG 0.600284 8_2:-25263587 None:intergenic
AATAGTTCGATGAGATCTCA+GGG 0.600975 8_2:+25262871 Msa1241570:CDS
CACCTGATCTGGATGACGGA+GGG 0.602336 8_2:-25263716 None:intergenic
TTCCGGCATACGAAAATACA+AGG 0.602463 8_2:+25263298 Msa1241570:CDS
GACGGAAGAATGATTCATCA+AGG 0.604217 8_2:+25263156 Msa1241570:CDS
TGAATGTGAGCTGAATGATC+TGG 0.604270 8_2:-25263622 None:intergenic
CTTCTGTCGTTATCACAACC+AGG 0.608348 8_2:-25262397 None:intergenic
TGAGAAGGCATTGTAGGTGA+AGG 0.611475 8_2:-25263495 None:intergenic
GATTCATCAAGGAGTAGGAA+GGG 0.611644 8_2:+25263167 Msa1241570:CDS
AAGGTGGAACTGTAAGTGCA+GGG 0.611990 8_2:-25263563 None:intergenic
TGATCCCATTACTACATAGG+AGG 0.615657 8_2:-25263927 None:intergenic
AAACAACGCCGGGAATAGGA+TGG 0.619668 8_2:+25263770 Msa1241570:CDS
GAAGGTGACGATGCAACCAT+CGG 0.620053 8_2:-25263477 None:intergenic
AGAGCAGTTGTTGCCTGTGA+AGG 0.626472 8_2:+25262766 Msa1241570:CDS
GAGCTGAATGATCTGGCCGA+TGG 0.626913 8_2:-25263615 None:intergenic
ACTACCAACCTTGTAAGCGA+TGG 0.630386 8_2:+25262658 Msa1241570:CDS
GATTCTTCAATCTCATCAGG+TGG 0.630854 8_2:+25263435 Msa1241570:CDS
TGCTGTATTGATACTGACGC+TGG 0.632713 8_2:-25262901 None:intergenic
AGATCCGACTGAAGAATGAG+AGG 0.634680 8_2:+25262425 Msa1241570:CDS
CAGTCTCACCCTCAACATCA+CGG 0.637258 8_2:+25263516 Msa1241570:CDS
TGGATCGCGAAATGTTGGCA+CGG 0.640240 8_2:+25263809 Msa1241570:CDS
GAGGAAGCACCAGAGACAGA+GGG 0.640584 8_2:+25262444 Msa1241570:CDS
TACTCAGACACCGTTCCTTG+AGG 0.642758 8_2:-25262283 None:intergenic
ACATCACCTGATCTGGATGA+CGG 0.647665 8_2:-25263720 None:intergenic
AATTAGAAGAATCGATATCG+TGG 0.648950 8_2:+25262605 Msa1241570:CDS
TGGTTGTGATAACGACAGAA+GGG 0.649400 8_2:+25262399 Msa1241570:CDS
CCGCAAAAGAGCCCAAGGGA+AGG 0.656859 8_2:-25263582 None:intergenic
AAGCTGCAAACTCATCTACT+CGG 0.657093 8_2:+25262362 Msa1241570:CDS
GTCCTTCCCAGCAAAAGGTG+AGG 0.666833 8_2:-25263871 None:intergenic
CCGAGTGCCTTTAGGAACGA+CGG 0.668148 8_2:+25263138 Msa1241570:CDS
TGATTCAAGTGTAGAGACTG+TGG 0.675419 8_2:-25263003 None:intergenic
ATATCGTGGCTATTTGAAGG+AGG 0.676954 8_2:+25262619 Msa1241570:CDS
AAGTGCAGGGGAAGATGCAG+CGG 0.677500 8_2:-25263550 None:intergenic
AGGTGGAACTGTAAGTGCAG+GGG 0.680688 8_2:-25263562 None:intergenic
CACGTGGATTGGAATACCGG+GGG 0.681996 8_2:+25263645 Msa1241570:CDS
TTCAACTATTACAATGTACG+TGG 0.683105 8_2:+25262943 Msa1241570:CDS
ACACGTGGATTGGAATACCG+GGG 0.685254 8_2:+25263644 Msa1241570:CDS
TCACCTGATCTGGATGACGG+AGG 0.688263 8_2:-25263717 None:intergenic
TTGGCTTTGAAGTTAAACAA+CGG 0.688283 8_2:+25262580 Msa1241570:CDS
TCGTCGTTGAGAAACAACGC+CGG 0.691823 8_2:+25263759 Msa1241570:CDS
GAACTGACACAGAAAAGATG+GGG 0.693814 8_2:+25263033 Msa1241570:CDS
GTCACCGTATGTTAAAATGG+AGG 0.695807 8_2:+25263110 Msa1241570:CDS
TACCAACTAGATGTTCCGGA+AGG 0.699009 8_2:-25263264 None:intergenic
TCAGTATCAATACAGCAGAG+AGG 0.701867 8_2:+25262907 Msa1241570:CDS
ATTCAGCTCACATTCACACG+TGG 0.712733 8_2:+25263629 Msa1241570:CDS
ATGACCGCAAAAGAGCCCAA+GGG 0.718537 8_2:-25263586 None:intergenic
TGTTGAGGGTGAGACTGAGA+AGG 0.739379 8_2:-25263510 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTCATTTATTTTTGCGAAT+TGG - chr8_2:25262243-25262262 None:intergenic 20.0%
!!! TATGATTCTGTTTCTAATAA+CGG + chr8_2:25262304-25262323 Msa1241570:CDS 20.0%
!!! AGAATTCAGATAATTTTGTT+TGG - chr8_2:25263232-25263251 None:intergenic 20.0%
!! AATTTACTACTACAAAATCA+TGG + chr8_2:25263330-25263349 Msa1241570:CDS 20.0%
!!! TTTCATTTATTTTTGCGAAT+TGG - chr8_2:25262243-25262262 None:intergenic 20.0%
!!! TATGATTCTGTTTCTAATAA+CGG + chr8_2:25262304-25262323 Msa1241570:CDS 20.0%
!!! AGAATTCAGATAATTTTGTT+TGG - chr8_2:25263232-25263251 None:intergenic 20.0%
!! AATTTACTACTACAAAATCA+TGG + chr8_2:25263330-25263349 Msa1241570:CDS 20.0%
!!! TTGGATTTTGATTTCATTGA+TGG - chr8_2:25262076-25262095 None:intergenic 25.0%
! AACATATTAGAAGGATTTGA+TGG - chr8_2:25263072-25263091 None:intergenic 25.0%
!! ATGGATTGTAACATATTAGA+AGG - chr8_2:25263081-25263100 None:intergenic 25.0%
! ACATGGGAATATTCTTTATA+AGG - chr8_2:25263402-25263421 None:intergenic 25.0%
! AAAGAATATTCCCATGTATT+TGG + chr8_2:25263405-25263424 Msa1241570:CDS 25.0%
! AAGAATATTCCCATGTATTT+GGG + chr8_2:25263406-25263425 Msa1241570:CDS 25.0%
!!! TTGGATTTTGATTTCATTGA+TGG - chr8_2:25262076-25262095 None:intergenic 25.0%
! AACATATTAGAAGGATTTGA+TGG - chr8_2:25263072-25263091 None:intergenic 25.0%
!! ATGGATTGTAACATATTAGA+AGG - chr8_2:25263081-25263100 None:intergenic 25.0%
! ACATGGGAATATTCTTTATA+AGG - chr8_2:25263402-25263421 None:intergenic 25.0%
! AAAGAATATTCCCATGTATT+TGG + chr8_2:25263405-25263424 Msa1241570:CDS 25.0%
! AAGAATATTCCCATGTATTT+GGG + chr8_2:25263406-25263425 Msa1241570:CDS 25.0%
!! TTGGCTTTGAAGTTAAACAA+CGG + chr8_2:25262580-25262599 Msa1241570:CDS 30.0%
AATTAGAAGAATCGATATCG+TGG + chr8_2:25262605-25262624 Msa1241570:CDS 30.0%
AAGCATGTTAAAATCTCAGA+AGG + chr8_2:25262807-25262826 Msa1241570:CDS 30.0%
AGGAAGAATCTCATTTGAAT+CGG + chr8_2:25262827-25262846 Msa1241570:CDS 30.0%
TTCAACTATTACAATGTACG+TGG + chr8_2:25262943-25262962 Msa1241570:CDS 30.0%
AATGTCACCGTATGTTAAAA+TGG + chr8_2:25263107-25263126 Msa1241570:CDS 30.0%
!! CAGATAATTTTGTTTGGCAT+CGG - chr8_2:25263226-25263245 None:intergenic 30.0%
TTGGTATGTAAATAGTGTTC+CGG + chr8_2:25263281-25263300 Msa1241570:CDS 30.0%
TCGACTACAACAATATAGAT+TGG + chr8_2:25263682-25263701 Msa1241570:CDS 30.0%
GGAAAAGTAACAAACTTTCT+GGG - chr8_2:25263909-25263928 None:intergenic 30.0%
AGGAAAAGTAACAAACTTTC+TGG - chr8_2:25263910-25263929 None:intergenic 30.0%
!! TTGGCTTTGAAGTTAAACAA+CGG + chr8_2:25262580-25262599 Msa1241570:CDS 30.0%
AATTAGAAGAATCGATATCG+TGG + chr8_2:25262605-25262624 Msa1241570:CDS 30.0%
AAGCATGTTAAAATCTCAGA+AGG + chr8_2:25262807-25262826 Msa1241570:CDS 30.0%
AGGAAGAATCTCATTTGAAT+CGG + chr8_2:25262827-25262846 Msa1241570:CDS 30.0%
TTCAACTATTACAATGTACG+TGG + chr8_2:25262943-25262962 Msa1241570:CDS 30.0%
AATGTCACCGTATGTTAAAA+TGG + chr8_2:25263107-25263126 Msa1241570:CDS 30.0%
!! CAGATAATTTTGTTTGGCAT+CGG - chr8_2:25263226-25263245 None:intergenic 30.0%
TTGGTATGTAAATAGTGTTC+CGG + chr8_2:25263281-25263300 Msa1241570:CDS 30.0%
TCGACTACAACAATATAGAT+TGG + chr8_2:25263682-25263701 Msa1241570:CDS 30.0%
GGAAAAGTAACAAACTTTCT+GGG - chr8_2:25263909-25263928 None:intergenic 30.0%
AGGAAAAGTAACAAACTTTC+TGG - chr8_2:25263910-25263929 None:intergenic 30.0%
GAAATCAAAATCCAAGTCGA+AGG + chr8_2:25262081-25262100 Msa1241570:CDS 35.0%
TTGGCTGTTGTCATTAACTA+TGG - chr8_2:25262224-25262243 None:intergenic 35.0%
GATCATTCTATTAGTCCTCA+AGG + chr8_2:25262268-25262287 Msa1241570:CDS 35.0%
TTCTATTAGTCCTCAAGGAA+CGG + chr8_2:25262273-25262292 Msa1241570:CDS 35.0%
AAAACTTGTGCAGAAGTTAG+TGG + chr8_2:25262528-25262547 Msa1241570:CDS 35.0%
TCAAATTACCATCGCTTACA+AGG - chr8_2:25262669-25262688 None:intergenic 35.0%
GCTTGAACAAATTTATGCTC+TGG + chr8_2:25262708-25262727 Msa1241570:CDS 35.0%
TAATAGTTCGATGAGATCTC+AGG + chr8_2:25262870-25262889 Msa1241570:CDS 35.0%
AATAGTTCGATGAGATCTCA+GGG + chr8_2:25262871-25262890 Msa1241570:CDS 35.0%
TGTTCCATGATCCTGAAAAT+AGG + chr8_2:25262977-25262996 Msa1241570:CDS 35.0%
!! GATTCCTATTTTCAGGATCA+TGG - chr8_2:25262984-25263003 None:intergenic 35.0%
ATGAACTGACACAGAAAAGA+TGG + chr8_2:25263031-25263050 Msa1241570:CDS 35.0%
TGAACTGACACAGAAAAGAT+GGG + chr8_2:25263032-25263051 Msa1241570:CDS 35.0%
!! TGTGCCTCCATTTTAACATA+CGG - chr8_2:25263117-25263136 None:intergenic 35.0%
AGAATGATTCATCAAGGAGT+AGG + chr8_2:25263162-25263181 Msa1241570:CDS 35.0%
TCTATGAATTCCATACCTTC+CGG + chr8_2:25263249-25263268 Msa1241570:CDS 35.0%
TACATACCAACTAGATGTTC+CGG - chr8_2:25263271-25263290 None:intergenic 35.0%
TACGAAAATACAAGGTCGAA+TGG + chr8_2:25263306-25263325 Msa1241570:CDS 35.0%
ACGAAAATACAAGGTCGAAT+GGG + chr8_2:25263307-25263326 Msa1241570:CDS 35.0%
ACTACTACAAAATCATGGCA+TGG + chr8_2:25263335-25263354 Msa1241570:CDS 35.0%
CTACTACAAAATCATGGCAT+GGG + chr8_2:25263336-25263355 Msa1241570:CDS 35.0%
GAAATCAAAATCCAAGTCGA+AGG + chr8_2:25262081-25262100 Msa1241570:CDS 35.0%
TTGGCTGTTGTCATTAACTA+TGG - chr8_2:25262224-25262243 None:intergenic 35.0%
GATCATTCTATTAGTCCTCA+AGG + chr8_2:25262268-25262287 Msa1241570:CDS 35.0%
TTCTATTAGTCCTCAAGGAA+CGG + chr8_2:25262273-25262292 Msa1241570:CDS 35.0%
AAAACTTGTGCAGAAGTTAG+TGG + chr8_2:25262528-25262547 Msa1241570:CDS 35.0%
TCAAATTACCATCGCTTACA+AGG - chr8_2:25262669-25262688 None:intergenic 35.0%
GCTTGAACAAATTTATGCTC+TGG + chr8_2:25262708-25262727 Msa1241570:CDS 35.0%
TAATAGTTCGATGAGATCTC+AGG + chr8_2:25262870-25262889 Msa1241570:CDS 35.0%
AATAGTTCGATGAGATCTCA+GGG + chr8_2:25262871-25262890 Msa1241570:CDS 35.0%
TGTTCCATGATCCTGAAAAT+AGG + chr8_2:25262977-25262996 Msa1241570:CDS 35.0%
!! GATTCCTATTTTCAGGATCA+TGG - chr8_2:25262984-25263003 None:intergenic 35.0%
ATGAACTGACACAGAAAAGA+TGG + chr8_2:25263031-25263050 Msa1241570:CDS 35.0%
TGAACTGACACAGAAAAGAT+GGG + chr8_2:25263032-25263051 Msa1241570:CDS 35.0%
!! TGTGCCTCCATTTTAACATA+CGG - chr8_2:25263117-25263136 None:intergenic 35.0%
AGAATGATTCATCAAGGAGT+AGG + chr8_2:25263162-25263181 Msa1241570:CDS 35.0%
TCTATGAATTCCATACCTTC+CGG + chr8_2:25263249-25263268 Msa1241570:CDS 35.0%
TACATACCAACTAGATGTTC+CGG - chr8_2:25263271-25263290 None:intergenic 35.0%
TACGAAAATACAAGGTCGAA+TGG + chr8_2:25263306-25263325 Msa1241570:CDS 35.0%
ACGAAAATACAAGGTCGAAT+GGG + chr8_2:25263307-25263326 Msa1241570:CDS 35.0%
ACTACTACAAAATCATGGCA+TGG + chr8_2:25263335-25263354 Msa1241570:CDS 35.0%
CTACTACAAAATCATGGCAT+GGG + chr8_2:25263336-25263355 Msa1241570:CDS 35.0%
AAGACTTCTCCAAAGACTTC+CGG + chr8_2:25262127-25262146 Msa1241570:CDS 40.0%
TTAGTAGATCCGGAAGTCTT+TGG - chr8_2:25262139-25262158 None:intergenic 40.0%
GCTCTCATCATTAGTAGATC+CGG - chr8_2:25262149-25262168 None:intergenic 40.0%
TCTAATAACGGCAGTTGTTC+TGG + chr8_2:25262316-25262335 Msa1241570:CDS 40.0%
AAGCTGCAAACTCATCTACT+CGG + chr8_2:25262362-25262381 Msa1241570:CDS 40.0%
ACTCGGTTGGAATTTATACC+TGG + chr8_2:25262379-25262398 Msa1241570:CDS 40.0%
! TGGTTGTGATAACGACAGAA+GGG + chr8_2:25262399-25262418 Msa1241570:CDS 40.0%
TCGATATCGTGGCTATTTGA+AGG + chr8_2:25262616-25262635 Msa1241570:CDS 40.0%
ATATCGTGGCTATTTGAAGG+AGG + chr8_2:25262619-25262638 Msa1241570:CDS 40.0%
ATTACCATCGCTTACAAGGT+TGG - chr8_2:25262665-25262684 None:intergenic 40.0%
!! CTTTTGAAGATCACCTTCAC+AGG - chr8_2:25262782-25262801 None:intergenic 40.0%
CTGTGAAGGTGATCTTCAAA+AGG + chr8_2:25262780-25262799 Msa1241570:CDS 40.0%
TCAGTATCAATACAGCAGAG+AGG + chr8_2:25262907-25262926 Msa1241570:CDS 40.0%
CAGTATCAATACAGCAGAGA+GGG + chr8_2:25262908-25262927 Msa1241570:CDS 40.0%
! GACTGTGGATTCCTATTTTC+AGG - chr8_2:25262991-25263010 None:intergenic 40.0%
TGATTCAAGTGTAGAGACTG+TGG - chr8_2:25263006-25263025 None:intergenic 40.0%
GAACTGACACAGAAAAGATG+GGG + chr8_2:25263033-25263052 Msa1241570:CDS 40.0%
GTCACCGTATGTTAAAATGG+AGG + chr8_2:25263110-25263129 Msa1241570:CDS 40.0%
GACGGAAGAATGATTCATCA+AGG + chr8_2:25263156-25263175 Msa1241570:CDS 40.0%
TGATTCATCAAGGAGTAGGA+AGG + chr8_2:25263166-25263185 Msa1241570:CDS 40.0%
GATTCATCAAGGAGTAGGAA+GGG + chr8_2:25263167-25263186 Msa1241570:CDS 40.0%
TTCCGGCATACGAAAATACA+AGG + chr8_2:25263298-25263317 Msa1241570:CDS 40.0%
! GACCTTGTATTTTCGTATGC+CGG - chr8_2:25263303-25263322 None:intergenic 40.0%
AATCATGGCATGGGAAATGT+CGG + chr8_2:25263345-25263364 Msa1241570:CDS 40.0%
ATATTCCCATGTATTTGGGC+CGG + chr8_2:25263410-25263429 Msa1241570:CDS 40.0%
GATGAGATTGAAGAATCTGC+CGG - chr8_2:25263432-25263451 None:intergenic 40.0%
GCAGATTCTTCAATCTCATC+AGG + chr8_2:25263432-25263451 Msa1241570:CDS 40.0%
GATTCTTCAATCTCATCAGG+TGG + chr8_2:25263435-25263454 Msa1241570:CDS 40.0%
TTCAATCTCATCAGGTGGAA+TGG + chr8_2:25263440-25263459 Msa1241570:CDS 40.0%
TCAATCTCATCAGGTGGAAT+GGG + chr8_2:25263441-25263460 Msa1241570:CDS 40.0%
TGAATGTGAGCTGAATGATC+TGG - chr8_2:25263625-25263644 None:intergenic 40.0%
ATGGCCAGTTCTTATATGAC+TGG + chr8_2:25263789-25263808 Msa1241570:CDS 40.0%
CGATCCAGTCATATAAGAAC+TGG - chr8_2:25263796-25263815 None:intergenic 40.0%
AATATGTCCTTCCCAGCAAA+AGG - chr8_2:25263879-25263898 None:intergenic 40.0%
AAGACTTCTCCAAAGACTTC+CGG + chr8_2:25262127-25262146 Msa1241570:CDS 40.0%
TTAGTAGATCCGGAAGTCTT+TGG - chr8_2:25262139-25262158 None:intergenic 40.0%
GCTCTCATCATTAGTAGATC+CGG - chr8_2:25262149-25262168 None:intergenic 40.0%
TCTAATAACGGCAGTTGTTC+TGG + chr8_2:25262316-25262335 Msa1241570:CDS 40.0%
AAGCTGCAAACTCATCTACT+CGG + chr8_2:25262362-25262381 Msa1241570:CDS 40.0%
ACTCGGTTGGAATTTATACC+TGG + chr8_2:25262379-25262398 Msa1241570:CDS 40.0%
! TGGTTGTGATAACGACAGAA+GGG + chr8_2:25262399-25262418 Msa1241570:CDS 40.0%
TCGATATCGTGGCTATTTGA+AGG + chr8_2:25262616-25262635 Msa1241570:CDS 40.0%
ATATCGTGGCTATTTGAAGG+AGG + chr8_2:25262619-25262638 Msa1241570:CDS 40.0%
ATTACCATCGCTTACAAGGT+TGG - chr8_2:25262665-25262684 None:intergenic 40.0%
!! CTTTTGAAGATCACCTTCAC+AGG - chr8_2:25262782-25262801 None:intergenic 40.0%
CTGTGAAGGTGATCTTCAAA+AGG + chr8_2:25262780-25262799 Msa1241570:CDS 40.0%
TCAGTATCAATACAGCAGAG+AGG + chr8_2:25262907-25262926 Msa1241570:CDS 40.0%
CAGTATCAATACAGCAGAGA+GGG + chr8_2:25262908-25262927 Msa1241570:CDS 40.0%
! GACTGTGGATTCCTATTTTC+AGG - chr8_2:25262991-25263010 None:intergenic 40.0%
TGATTCAAGTGTAGAGACTG+TGG - chr8_2:25263006-25263025 None:intergenic 40.0%
GAACTGACACAGAAAAGATG+GGG + chr8_2:25263033-25263052 Msa1241570:CDS 40.0%
GTCACCGTATGTTAAAATGG+AGG + chr8_2:25263110-25263129 Msa1241570:CDS 40.0%
GACGGAAGAATGATTCATCA+AGG + chr8_2:25263156-25263175 Msa1241570:CDS 40.0%
TGATTCATCAAGGAGTAGGA+AGG + chr8_2:25263166-25263185 Msa1241570:CDS 40.0%
GATTCATCAAGGAGTAGGAA+GGG + chr8_2:25263167-25263186 Msa1241570:CDS 40.0%
TTCCGGCATACGAAAATACA+AGG + chr8_2:25263298-25263317 Msa1241570:CDS 40.0%
! GACCTTGTATTTTCGTATGC+CGG - chr8_2:25263303-25263322 None:intergenic 40.0%
AATCATGGCATGGGAAATGT+CGG + chr8_2:25263345-25263364 Msa1241570:CDS 40.0%
ATATTCCCATGTATTTGGGC+CGG + chr8_2:25263410-25263429 Msa1241570:CDS 40.0%
GATGAGATTGAAGAATCTGC+CGG - chr8_2:25263432-25263451 None:intergenic 40.0%
GCAGATTCTTCAATCTCATC+AGG + chr8_2:25263432-25263451 Msa1241570:CDS 40.0%
GATTCTTCAATCTCATCAGG+TGG + chr8_2:25263435-25263454 Msa1241570:CDS 40.0%
TTCAATCTCATCAGGTGGAA+TGG + chr8_2:25263440-25263459 Msa1241570:CDS 40.0%
TCAATCTCATCAGGTGGAAT+GGG + chr8_2:25263441-25263460 Msa1241570:CDS 40.0%
TGAATGTGAGCTGAATGATC+TGG - chr8_2:25263625-25263644 None:intergenic 40.0%
ATGGCCAGTTCTTATATGAC+TGG + chr8_2:25263789-25263808 Msa1241570:CDS 40.0%
CGATCCAGTCATATAAGAAC+TGG - chr8_2:25263796-25263815 None:intergenic 40.0%
AATATGTCCTTCCCAGCAAA+AGG - chr8_2:25263879-25263898 None:intergenic 40.0%
AAAATCCAAGTCGAAGGCGA+AGG + chr8_2:25262087-25262106 Msa1241570:CDS 45.0%
GTGCGATCTCGAAACATCAT+TGG + chr8_2:25262186-25262205 Msa1241570:CDS 45.0%
TGCAAACTCATCTACTCGGT+TGG + chr8_2:25262366-25262385 Msa1241570:CDS 45.0%
CTTCTGTCGTTATCACAACC+AGG - chr8_2:25262400-25262419 None:intergenic 45.0%
! CTGGTTGTGATAACGACAGA+AGG + chr8_2:25262398-25262417 Msa1241570:CDS 45.0%
AGATCCGACTGAAGAATGAG+AGG + chr8_2:25262425-25262444 Msa1241570:CDS 45.0%
GCTTCCTCTCATTCTTCAGT+CGG - chr8_2:25262432-25262451 None:intergenic 45.0%
ACTACCAACCTTGTAAGCGA+TGG + chr8_2:25262658-25262677 Msa1241570:CDS 45.0%
! TGCTGTATTGATACTGACGC+TGG - chr8_2:25262904-25262923 None:intergenic 45.0%
ATACGGTGACATTGCTTGCA+TGG - chr8_2:25263100-25263119 None:intergenic 45.0%
CATTCTTCCGTCGTTCCTAA+AGG - chr8_2:25263148-25263167 None:intergenic 45.0%
ACTAGATGTTCCGGAAGGTA+TGG - chr8_2:25263262-25263281 None:intergenic 45.0%
TACCTTCCGGAACATCTAGT+TGG + chr8_2:25263262-25263281 Msa1241570:CDS 45.0%
TACCAACTAGATGTTCCGGA+AGG - chr8_2:25263267-25263286 None:intergenic 45.0%
GGGAGGTTTCTATAAACCGA+TGG + chr8_2:25263461-25263480 Msa1241570:CDS 45.0%
!! TGAGAAGGCATTGTAGGTGA+AGG - chr8_2:25263498-25263517 None:intergenic 45.0%
!! TGAGACTGAGAAGGCATTGT+AGG - chr8_2:25263504-25263523 None:intergenic 45.0%
AAGGTGGAACTGTAAGTGCA+GGG - chr8_2:25263566-25263585 None:intergenic 45.0%
TTACAGTTCCACCTTCCCTT+GGG + chr8_2:25263571-25263590 Msa1241570:CDS 45.0%
TTGCGGTCATCAGAATCCAT+CGG + chr8_2:25263599-25263618 Msa1241570:CDS 45.0%
ATTCAGCTCACATTCACACG+TGG + chr8_2:25263629-25263648 Msa1241570:CDS 45.0%
!! TCACACGTGGATTGGAATAC+CGG + chr8_2:25263642-25263661 Msa1241570:CDS 45.0%
ACATCACCTGATCTGGATGA+CGG - chr8_2:25263723-25263742 None:intergenic 45.0%
CATCCAGATCAGGTGATGTA+TGG + chr8_2:25263724-25263743 Msa1241570:CDS 45.0%
TAGCCATACATCACCTGATC+TGG - chr8_2:25263730-25263749 None:intergenic 45.0%
AGATCAGGTGATGTATGGCT+AGG + chr8_2:25263729-25263748 Msa1241570:CDS 45.0%
ATGACTGGATCGCGAAATGT+TGG + chr8_2:25263804-25263823 Msa1241570:CDS 45.0%
AGGGAAATTTCATCGTCTGC+TGG + chr8_2:25263834-25263853 Msa1241570:CDS 45.0%
! ATTGGACCTCACCTTTTGCT+GGG + chr8_2:25263865-25263884 Msa1241570:CDS 45.0%
AAAATCCAAGTCGAAGGCGA+AGG + chr8_2:25262087-25262106 Msa1241570:CDS 45.0%
GTGCGATCTCGAAACATCAT+TGG + chr8_2:25262186-25262205 Msa1241570:CDS 45.0%
TGCAAACTCATCTACTCGGT+TGG + chr8_2:25262366-25262385 Msa1241570:CDS 45.0%
CTTCTGTCGTTATCACAACC+AGG - chr8_2:25262400-25262419 None:intergenic 45.0%
! CTGGTTGTGATAACGACAGA+AGG + chr8_2:25262398-25262417 Msa1241570:CDS 45.0%
AGATCCGACTGAAGAATGAG+AGG + chr8_2:25262425-25262444 Msa1241570:CDS 45.0%
GCTTCCTCTCATTCTTCAGT+CGG - chr8_2:25262432-25262451 None:intergenic 45.0%
ACTACCAACCTTGTAAGCGA+TGG + chr8_2:25262658-25262677 Msa1241570:CDS 45.0%
! TGCTGTATTGATACTGACGC+TGG - chr8_2:25262904-25262923 None:intergenic 45.0%
ATACGGTGACATTGCTTGCA+TGG - chr8_2:25263100-25263119 None:intergenic 45.0%
CATTCTTCCGTCGTTCCTAA+AGG - chr8_2:25263148-25263167 None:intergenic 45.0%
ACTAGATGTTCCGGAAGGTA+TGG - chr8_2:25263262-25263281 None:intergenic 45.0%
TACCTTCCGGAACATCTAGT+TGG + chr8_2:25263262-25263281 Msa1241570:CDS 45.0%
TACCAACTAGATGTTCCGGA+AGG - chr8_2:25263267-25263286 None:intergenic 45.0%
GGGAGGTTTCTATAAACCGA+TGG + chr8_2:25263461-25263480 Msa1241570:CDS 45.0%
!! TGAGAAGGCATTGTAGGTGA+AGG - chr8_2:25263498-25263517 None:intergenic 45.0%
!! TGAGACTGAGAAGGCATTGT+AGG - chr8_2:25263504-25263523 None:intergenic 45.0%
AAGGTGGAACTGTAAGTGCA+GGG - chr8_2:25263566-25263585 None:intergenic 45.0%
TTACAGTTCCACCTTCCCTT+GGG + chr8_2:25263571-25263590 Msa1241570:CDS 45.0%
TTGCGGTCATCAGAATCCAT+CGG + chr8_2:25263599-25263618 Msa1241570:CDS 45.0%
ATTCAGCTCACATTCACACG+TGG + chr8_2:25263629-25263648 Msa1241570:CDS 45.0%
!! TCACACGTGGATTGGAATAC+CGG + chr8_2:25263642-25263661 Msa1241570:CDS 45.0%
ACATCACCTGATCTGGATGA+CGG - chr8_2:25263723-25263742 None:intergenic 45.0%
CATCCAGATCAGGTGATGTA+TGG + chr8_2:25263724-25263743 Msa1241570:CDS 45.0%
TAGCCATACATCACCTGATC+TGG - chr8_2:25263730-25263749 None:intergenic 45.0%
AGATCAGGTGATGTATGGCT+AGG + chr8_2:25263729-25263748 Msa1241570:CDS 45.0%
ATGACTGGATCGCGAAATGT+TGG + chr8_2:25263804-25263823 Msa1241570:CDS 45.0%
AGGGAAATTTCATCGTCTGC+TGG + chr8_2:25263834-25263853 Msa1241570:CDS 45.0%
! ATTGGACCTCACCTTTTGCT+GGG + chr8_2:25263865-25263884 Msa1241570:CDS 45.0%
TACTCAGACACCGTTCCTTG+AGG - chr8_2:25262286-25262305 None:intergenic 50.0%
CGGCAGTTGTTCTGGTGAAT+CGG + chr8_2:25262324-25262343 Msa1241570:CDS 50.0%
TGTGCAGAAGTTAGTGGCGA+TGG + chr8_2:25262534-25262553 Msa1241570:CDS 50.0%
GTGCAGAAGTTAGTGGCGAT+GGG + chr8_2:25262535-25262554 Msa1241570:CDS 50.0%
AGAGCAGTTGTTGCCTGTGA+AGG + chr8_2:25262766-25262785 Msa1241570:CDS 50.0%
TCAAGGAGTAGGAAGGGAAC+AGG + chr8_2:25263173-25263192 Msa1241570:CDS 50.0%
!! TGTTTGGCATCGGCGAATTG+TGG - chr8_2:25263216-25263235 None:intergenic 50.0%
GAGCTTGAGAAAGTTGCTGC+AGG - chr8_2:25263380-25263399 None:intergenic 50.0%
ATCTGCCGGCCCAAATACAT+GGG - chr8_2:25263418-25263437 None:intergenic 50.0%
AATCTGCCGGCCCAAATACA+TGG - chr8_2:25263419-25263438 None:intergenic 50.0%
ATCTCATCAGGTGGAATGGG+AGG + chr8_2:25263444-25263463 Msa1241570:CDS 50.0%
GAAGGTGACGATGCAACCAT+CGG - chr8_2:25263480-25263499 None:intergenic 50.0%
TGTTGAGGGTGAGACTGAGA+AGG - chr8_2:25263513-25263532 None:intergenic 50.0%
CAGTCTCACCCTCAACATCA+CGG + chr8_2:25263516-25263535 Msa1241570:CDS 50.0%
AGGTGGAACTGTAAGTGCAG+GGG - chr8_2:25263565-25263584 None:intergenic 50.0%
GAAGGTGGAACTGTAAGTGC+AGG - chr8_2:25263567-25263586 None:intergenic 50.0%
CTTACAGTTCCACCTTCCCT+TGG + chr8_2:25263570-25263589 Msa1241570:CDS 50.0%
ATGACCGCAAAAGAGCCCAA+GGG - chr8_2:25263589-25263608 None:intergenic 50.0%
GCTCACATTCACACGTGGAT+TGG + chr8_2:25263634-25263653 Msa1241570:CDS 50.0%
!! CACACGTGGATTGGAATACC+GGG + chr8_2:25263643-25263662 Msa1241570:CDS 50.0%
!! ACACGTGGATTGGAATACCG+GGG + chr8_2:25263644-25263663 Msa1241570:CDS 50.0%
TCGTCGTTGAGAAACAACGC+CGG + chr8_2:25263759-25263778 Msa1241570:CDS 50.0%
TGAGAAACAACGCCGGGAAT+AGG + chr8_2:25263766-25263785 Msa1241570:CDS 50.0%
AAACAACGCCGGGAATAGGA+TGG + chr8_2:25263770-25263789 Msa1241570:CDS 50.0%
AGAACTGGCCATCCTATTCC+CGG - chr8_2:25263781-25263800 None:intergenic 50.0%
TGGATCGCGAAATGTTGGCA+CGG + chr8_2:25263809-25263828 Msa1241570:CDS 50.0%
! GATTGGACCTCACCTTTTGC+TGG + chr8_2:25263864-25263883 Msa1241570:CDS 50.0%
TACTCAGACACCGTTCCTTG+AGG - chr8_2:25262286-25262305 None:intergenic 50.0%
CGGCAGTTGTTCTGGTGAAT+CGG + chr8_2:25262324-25262343 Msa1241570:CDS 50.0%
TGTGCAGAAGTTAGTGGCGA+TGG + chr8_2:25262534-25262553 Msa1241570:CDS 50.0%
GTGCAGAAGTTAGTGGCGAT+GGG + chr8_2:25262535-25262554 Msa1241570:CDS 50.0%
AGAGCAGTTGTTGCCTGTGA+AGG + chr8_2:25262766-25262785 Msa1241570:CDS 50.0%
TCAAGGAGTAGGAAGGGAAC+AGG + chr8_2:25263173-25263192 Msa1241570:CDS 50.0%
!! TGTTTGGCATCGGCGAATTG+TGG - chr8_2:25263216-25263235 None:intergenic 50.0%
GAGCTTGAGAAAGTTGCTGC+AGG - chr8_2:25263380-25263399 None:intergenic 50.0%
ATCTGCCGGCCCAAATACAT+GGG - chr8_2:25263418-25263437 None:intergenic 50.0%
AATCTGCCGGCCCAAATACA+TGG - chr8_2:25263419-25263438 None:intergenic 50.0%
ATCTCATCAGGTGGAATGGG+AGG + chr8_2:25263444-25263463 Msa1241570:CDS 50.0%
GAAGGTGACGATGCAACCAT+CGG - chr8_2:25263480-25263499 None:intergenic 50.0%
TGTTGAGGGTGAGACTGAGA+AGG - chr8_2:25263513-25263532 None:intergenic 50.0%
CAGTCTCACCCTCAACATCA+CGG + chr8_2:25263516-25263535 Msa1241570:CDS 50.0%
AGGTGGAACTGTAAGTGCAG+GGG - chr8_2:25263565-25263584 None:intergenic 50.0%
GAAGGTGGAACTGTAAGTGC+AGG - chr8_2:25263567-25263586 None:intergenic 50.0%
CTTACAGTTCCACCTTCCCT+TGG + chr8_2:25263570-25263589 Msa1241570:CDS 50.0%
ATGACCGCAAAAGAGCCCAA+GGG - chr8_2:25263589-25263608 None:intergenic 50.0%
GCTCACATTCACACGTGGAT+TGG + chr8_2:25263634-25263653 Msa1241570:CDS 50.0%
!! CACACGTGGATTGGAATACC+GGG + chr8_2:25263643-25263662 Msa1241570:CDS 50.0%
!! ACACGTGGATTGGAATACCG+GGG + chr8_2:25263644-25263663 Msa1241570:CDS 50.0%
TCGTCGTTGAGAAACAACGC+CGG + chr8_2:25263759-25263778 Msa1241570:CDS 50.0%
TGAGAAACAACGCCGGGAAT+AGG + chr8_2:25263766-25263785 Msa1241570:CDS 50.0%
AAACAACGCCGGGAATAGGA+TGG + chr8_2:25263770-25263789 Msa1241570:CDS 50.0%
AGAACTGGCCATCCTATTCC+CGG - chr8_2:25263781-25263800 None:intergenic 50.0%
TGGATCGCGAAATGTTGGCA+CGG + chr8_2:25263809-25263828 Msa1241570:CDS 50.0%
! GATTGGACCTCACCTTTTGC+TGG + chr8_2:25263864-25263883 Msa1241570:CDS 50.0%
TCGAGATCGCACGCACTAGA+AGG - chr8_2:25262178-25262197 None:intergenic 55.0%
!! AGAGGAAGCACCAGAGACAG+AGG + chr8_2:25262443-25262462 Msa1241570:CDS 55.0%
!! GAGGAAGCACCAGAGACAGA+GGG + chr8_2:25262444-25262463 Msa1241570:CDS 55.0%
AGCACCAGAGACAGAGGGAA+AGG + chr8_2:25262449-25262468 Msa1241570:CDS 55.0%
CTCTCCTTTCCCTCTGTCTC+TGG - chr8_2:25262456-25262475 None:intergenic 55.0%
CAAAGCCAACGTTGCTCGCT+CGG - chr8_2:25262569-25262588 None:intergenic 55.0%
!! CCGTCGTTCCTAAAGGCACT+CGG - chr8_2:25263141-25263160 None:intergenic 55.0%
! CCGAGTGCCTTTAGGAACGA+CGG + chr8_2:25263138-25263157 Msa1241570:CDS 55.0%
ACCCTCAACATCACGGCTCA+CGG + chr8_2:25263523-25263542 Msa1241570:CDS 55.0%
TCCGTGAGCCGTGATGTTGA+GGG - chr8_2:25263527-25263546 None:intergenic 55.0%
TTCCGTGAGCCGTGATGTTG+AGG - chr8_2:25263528-25263547 None:intergenic 55.0%
AAGTGCAGGGGAAGATGCAG+CGG - chr8_2:25263553-25263572 None:intergenic 55.0%
CAAAAGAGCCCAAGGGAAGG+TGG - chr8_2:25263582-25263601 None:intergenic 55.0%
! CCTTCCCTTGGGCTCTTTTG+CGG + chr8_2:25263582-25263601 Msa1241570:CDS 55.0%
GATGACCGCAAAAGAGCCCA+AGG - chr8_2:25263590-25263609 None:intergenic 55.0%
GAGCTGAATGATCTGGCCGA+TGG - chr8_2:25263618-25263637 None:intergenic 55.0%
!! CACGTGGATTGGAATACCGG+GGG + chr8_2:25263645-25263664 Msa1241570:CDS 55.0%
GAATTCTTGCACCATGCCCC+CGG - chr8_2:25263664-25263683 None:intergenic 55.0%
!! CACCTGATCTGGATGACGGA+GGG - chr8_2:25263719-25263738 None:intergenic 55.0%
! TCACCTGATCTGGATGACGG+AGG - chr8_2:25263720-25263739 None:intergenic 55.0%
CGTCGTTGAGAAACAACGCC+GGG + chr8_2:25263760-25263779 Msa1241570:CDS 55.0%
GCGAAATGTTGGCACGGCAA+GGG + chr8_2:25263815-25263834 Msa1241570:CDS 55.0%
!! CGTCTGCTGGTTTGCGAGAT+TGG + chr8_2:25263847-25263866 Msa1241570:CDS 55.0%
! GACCTCACCTTTTGCTGGGA+AGG + chr8_2:25263869-25263888 Msa1241570:CDS 55.0%
GTCCTTCCCAGCAAAAGGTG+AGG - chr8_2:25263874-25263893 None:intergenic 55.0%
TCGAGATCGCACGCACTAGA+AGG - chr8_2:25262178-25262197 None:intergenic 55.0%
!! AGAGGAAGCACCAGAGACAG+AGG + chr8_2:25262443-25262462 Msa1241570:CDS 55.0%
!! GAGGAAGCACCAGAGACAGA+GGG + chr8_2:25262444-25262463 Msa1241570:CDS 55.0%
AGCACCAGAGACAGAGGGAA+AGG + chr8_2:25262449-25262468 Msa1241570:CDS 55.0%
CTCTCCTTTCCCTCTGTCTC+TGG - chr8_2:25262456-25262475 None:intergenic 55.0%
CAAAGCCAACGTTGCTCGCT+CGG - chr8_2:25262569-25262588 None:intergenic 55.0%
!! CCGTCGTTCCTAAAGGCACT+CGG - chr8_2:25263141-25263160 None:intergenic 55.0%
! CCGAGTGCCTTTAGGAACGA+CGG + chr8_2:25263138-25263157 Msa1241570:CDS 55.0%
ACCCTCAACATCACGGCTCA+CGG + chr8_2:25263523-25263542 Msa1241570:CDS 55.0%
TCCGTGAGCCGTGATGTTGA+GGG - chr8_2:25263527-25263546 None:intergenic 55.0%
TTCCGTGAGCCGTGATGTTG+AGG - chr8_2:25263528-25263547 None:intergenic 55.0%
AAGTGCAGGGGAAGATGCAG+CGG - chr8_2:25263553-25263572 None:intergenic 55.0%
CAAAAGAGCCCAAGGGAAGG+TGG - chr8_2:25263582-25263601 None:intergenic 55.0%
! CCTTCCCTTGGGCTCTTTTG+CGG + chr8_2:25263582-25263601 Msa1241570:CDS 55.0%
GATGACCGCAAAAGAGCCCA+AGG - chr8_2:25263590-25263609 None:intergenic 55.0%
GAGCTGAATGATCTGGCCGA+TGG - chr8_2:25263618-25263637 None:intergenic 55.0%
!! CACGTGGATTGGAATACCGG+GGG + chr8_2:25263645-25263664 Msa1241570:CDS 55.0%
GAATTCTTGCACCATGCCCC+CGG - chr8_2:25263664-25263683 None:intergenic 55.0%
!! CACCTGATCTGGATGACGGA+GGG - chr8_2:25263719-25263738 None:intergenic 55.0%
! TCACCTGATCTGGATGACGG+AGG - chr8_2:25263720-25263739 None:intergenic 55.0%
CGTCGTTGAGAAACAACGCC+GGG + chr8_2:25263760-25263779 Msa1241570:CDS 55.0%
GCGAAATGTTGGCACGGCAA+GGG + chr8_2:25263815-25263834 Msa1241570:CDS 55.0%
!! CGTCTGCTGGTTTGCGAGAT+TGG + chr8_2:25263847-25263866 Msa1241570:CDS 55.0%
! GACCTCACCTTTTGCTGGGA+AGG + chr8_2:25263869-25263888 Msa1241570:CDS 55.0%
GTCCTTCCCAGCAAAAGGTG+AGG - chr8_2:25263874-25263893 None:intergenic 55.0%
TGCAGCCTTCGCCTTCGACT+TGG - chr8_2:25262095-25262114 None:intergenic 60.0%
GTCGAAGGCGAAGGCTGCAA+AGG + chr8_2:25262096-25262115 Msa1241570:CDS 60.0%
CACTACCGAGCGAGCAACGT+TGG + chr8_2:25262561-25262580 Msa1241570:CDS 60.0%
AGGCACAGCCGAGTGCCTTT+AGG + chr8_2:25263130-25263149 Msa1241570:CDS 60.0%
CCGCAAAAGAGCCCAAGGGA+AGG - chr8_2:25263585-25263604 None:intergenic 60.0%
GGATTGGAATACCGGGGGCA+TGG + chr8_2:25263650-25263669 Msa1241570:CDS 60.0%
TGCCCTCCGTCATCCAGATC+AGG + chr8_2:25263714-25263733 Msa1241570:CDS 60.0%
CGCGAAATGTTGGCACGGCA+AGG + chr8_2:25263814-25263833 Msa1241570:CDS 60.0%
TGCAGCCTTCGCCTTCGACT+TGG - chr8_2:25262095-25262114 None:intergenic 60.0%
GTCGAAGGCGAAGGCTGCAA+AGG + chr8_2:25262096-25262115 Msa1241570:CDS 60.0%
CACTACCGAGCGAGCAACGT+TGG + chr8_2:25262561-25262580 Msa1241570:CDS 60.0%
AGGCACAGCCGAGTGCCTTT+AGG + chr8_2:25263130-25263149 Msa1241570:CDS 60.0%
CCGCAAAAGAGCCCAAGGGA+AGG - chr8_2:25263585-25263604 None:intergenic 60.0%
GGATTGGAATACCGGGGGCA+TGG + chr8_2:25263650-25263669 Msa1241570:CDS 60.0%
TGCCCTCCGTCATCCAGATC+AGG + chr8_2:25263714-25263733 Msa1241570:CDS 60.0%
CGCGAAATGTTGGCACGGCA+AGG + chr8_2:25263814-25263833 Msa1241570:CDS 60.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 25262067 25263938 25262067 ID=Msa1241570;Name=Msa1241570
chr8_2 mRNA 25262067 25263938 25262067 ID=Msa1241570-mRNA-1;Parent=Msa1241570;Name=Msa1241570-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|-1|0|1|-1|1|1|0|623
chr8_2 exon 25262067 25263938 25262067 ID=Msa1241570-mRNA-1:exon:8909;Parent=Msa1241570-mRNA-1
chr8_2 CDS 25262067 25263938 25262067 ID=Msa1241570-mRNA-1:cds;Parent=Msa1241570-mRNA-1
Gene Sequence

>Msa1241570

ATGTCTCCATCAATGAAATCAAAATCCAAGTCGAAGGCGAAGGCTGCAAAGGAACAACAAAAGACTTCTCCAAAGACTTCCGGATCTACTAATGATGAGAGCAGCATTCCTTCTAGTGCGTGCGATCTCGAAACATCATTGGTTGATTCTTCTTCCATAGTTAATGACAACAGCCAATTCGCAAAAATAAATGAAACAGATGATCATTCTATTAGTCCTCAAGGAACGGTGTCTGAGTATGATTCTGTTTCTAATAACGGCAGTTGTTCTGGTGAATCGGAAGACACTAAAGAGAAAGCTGCAAACTCATCTACTCGGTTGGAATTTATACCTGGTTGTGATAACGACAGAAGGGATAAGATCCGACTGAAGAATGAGAGGAAGCACCAGAGACAGAGGGAAAGGAGAGCTCATGAGTTGCACGAGCGATGCGTTGCGTATCTAATGTCGAGAAAGCTAGAAAAACTTGTGCAGAAGTTAGTGGCGATGGGATTCACTACCGAGCGAGCAACGTTGGCTTTGAAGTTAAACAACGGAAAATTAGAAGAATCGATATCGTGGCTATTTGAAGGAGGAAGTGAAGTGAAAGATACTACCAACCTTGTAAGCGATGGTAATTTGAAGATCGACATAAGTGAAGTGCTTGAACAAATTTATGCTCTGGAAGTAAAATACAATTGTTCAAAGCAAGAAGTTGAAAGAGCAGTTGTTGCCTGTGAAGGTGATCTTCAAAAGGCAGAAAGCATGTTAAAATCTCAGAAGGAAGAATCTCATTTGAATCGGTCAGAAGATTCTGCTCAAAATAATAGTTCGATGAGATCTCAGGGATTACAACCAGCGTCAGTATCAATACAGCAGAGAGGGAATGAAAGTGATTTCAACTATTACAATGTACGTGGTGCTGATTCTATGTTCCATGATCCTGAAAATAGGAATCCACAGTCTCTACACTTGAATCATCAAAATGAACTGACACAGAAAAGATGGGGTGTTAGTGCTACACCATCAAATCCTTCTAATATGTTACAATCCATGCAAGCAATGTCACCGTATGTTAAAATGGAGGCACAGCCGAGTGCCTTTAGGAACGACGGAAGAATGATTCATCAAGGAGTAGGAAGGGAACAGGTAGTCATGATGCAGCATCCACAATTCGCCGATGCCAAACAAAATTATCTGAATTCTATGAATTCCATACCTTCCGGAACATCTAGTTGGTATGTAAATAGTGTTCCGGCATACGAAAATACAAGGTCGAATGGGAATTTACTACTACAAAATCATGGCATGGGAAATGTCGGCGCAGATCGCCTGCAGCAACTTTCTCAAGCTCCTTATAAAGAATATTCCCATGTATTTGGGCCGGCAGATTCTTCAATCTCATCAGGTGGAATGGGAGGTTTCTATAAACCGATGGTTGCATCGTCACCTTCACCTACAATGCCTTCTCAGTCTCACCCTCAACATCACGGCTCACGGAACACCGCTGCATCTTCCCCTGCACTTACAGTTCCACCTTCCCTTGGGCTCTTTTGCGGTCATCAGAATCCATCGGCCAGATCATTCAGCTCACATTCACACGTGGATTGGAATACCGGGGGCATGGTGCAAGAATTCGACTACAACAATATAGATTGGAGTTTAGATTGCCCTCCGTCATCCAGATCAGGTGATGTATGGCTAGGATTCTCATCGTCGTTGAGAAACAACGCCGGGAATAGGATGGCCAGTTCTTATATGACTGGATCGCGAAATGTTGGCACGGCAAGGGAAATTTCATCGTCTGCTGGTTTGCGAGATTGGACCTCACCTTTTGCTGGGAAGGACATATTCAGTGCTCCCAGAAAGTTTGTTACTTTTCCTCCTATGTAG

Protein sequence

>Msa1241570

MSPSMKSKSKSKAKAAKEQQKTSPKTSGSTNDESSIPSSACDLETSLVDSSSIVNDNSQFAKINETDDHSISPQGTVSEYDSVSNNGSCSGESEDTKEKAANSSTRLEFIPGCDNDRRDKIRLKNERKHQRQRERRAHELHERCVAYLMSRKLEKLVQKLVAMGFTTERATLALKLNNGKLEESISWLFEGGSEVKDTTNLVSDGNLKIDISEVLEQIYALEVKYNCSKQEVERAVVACEGDLQKAESMLKSQKEESHLNRSEDSAQNNSSMRSQGLQPASVSIQQRGNESDFNYYNVRGADSMFHDPENRNPQSLHLNHQNELTQKRWGVSATPSNPSNMLQSMQAMSPYVKMEAQPSAFRNDGRMIHQGVGREQVVMMQHPQFADAKQNYLNSMNSIPSGTSSWYVNSVPAYENTRSNGNLLLQNHGMGNVGADRLQQLSQAPYKEYSHVFGPADSSISSGGMGGFYKPMVASSPSPTMPSQSHPQHHGSRNTAASSPALTVPPSLGLFCGHQNPSARSFSSHSHVDWNTGGMVQEFDYNNIDWSLDCPPSSRSGDVWLGFSSSLRNNAGNRMASSYMTGSRNVGTAREISSSAGLRDWTSPFAGKDIFSAPRKFVTFPPM*