Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1155520 | XP_003623886.2 | 94.332 | 247 | 14 | 0 | 1 | 247 | 1 | 247 | 5.36e-174 | 489 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1155520 | sp|Q1W376|PMM_SOYBN | 89.388 | 245 | 26 | 0 | 1 | 245 | 1 | 245 | 2.17e-160 | 447 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1155520 | G7L3I4 | 94.332 | 247 | 14 | 0 | 1 | 247 | 1 | 247 | 2.56e-174 | 489 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0027260 | Msa1155520 | 0.810734 | 9.947486e-51 | -8.615850e-47 |
| Msa0040690 | Msa1155520 | 0.802167 | 6.380281e-49 | -8.615850e-47 |
| Msa0042280 | Msa1155520 | 0.805810 | 1.115440e-49 | -8.615850e-47 |
| Msa0052610 | Msa1155520 | 0.832906 | 7.233909e-56 | -8.615850e-47 |
| Msa0067870 | Msa1155520 | 0.820691 | 6.000680e-53 | -8.615850e-47 |
| Msa0074320 | Msa1155520 | 0.812911 | 3.340504e-51 | -8.615850e-47 |
| Msa0100740 | Msa1155520 | 0.803453 | 3.461859e-49 | -8.615850e-47 |
| Msa0118710 | Msa1155520 | 0.811639 | 6.330948e-51 | -8.615850e-47 |
| Msa0615440 | Msa1155520 | 0.805101 | 1.570319e-49 | -8.615850e-47 |
| Msa0616240 | Msa1155520 | 0.816016 | 6.872980e-52 | -8.615850e-47 |
| Msa0620990 | Msa1155520 | 0.810483 | 1.127201e-50 | -8.615850e-47 |
| Msa0698490 | Msa1155520 | 0.806543 | 7.815854e-50 | -8.615850e-47 |
| Msa0698660 | Msa1155520 | 0.807954 | 3.926169e-50 | -8.615850e-47 |
| Msa0699570 | Msa1155520 | 0.820846 | 5.526763e-53 | -8.615850e-47 |
| Msa0709780 | Msa1155520 | 0.808382 | 3.183341e-50 | -8.615850e-47 |
| Msa0738040 | Msa1155520 | 0.808468 | 3.051031e-50 | -8.615850e-47 |
| Msa0738100 | Msa1155520 | 0.829148 | 6.053285e-55 | -8.615850e-47 |
| Msa0790610 | Msa1155520 | 0.818596 | 1.805295e-52 | -8.615850e-47 |
| Msa0817540 | Msa1155520 | 0.806549 | 7.794362e-50 | -8.615850e-47 |
| Msa0819030 | Msa1155520 | -0.814485 | 1.504360e-51 | -8.615850e-47 |
| Msa0128860 | Msa1155520 | 0.833092 | 6.505258e-56 | -8.615850e-47 |
| Msa0167480 | Msa1155520 | 0.840681 | 7.508465e-58 | -8.615850e-47 |
| Msa0174730 | Msa1155520 | 0.834595 | 2.736778e-56 | -8.615850e-47 |
| Msa0187690 | Msa1155520 | 0.814652 | 1.381182e-51 | -8.615850e-47 |
| Msa0187930 | Msa1155520 | 0.825187 | 5.372847e-54 | -8.615850e-47 |
| Msa0188890 | Msa1155520 | 0.818555 | 1.844299e-52 | -8.615850e-47 |
| Msa0194540 | Msa1155520 | 0.825465 | 4.617726e-54 | -8.615850e-47 |
| Msa0199880 | Msa1155520 | 0.808593 | 2.870325e-50 | -8.615850e-47 |
| Msa0226460 | Msa1155520 | 0.803214 | 3.879647e-49 | -8.615850e-47 |
| Msa0231100 | Msa1155520 | 0.815946 | 7.122091e-52 | -8.615850e-47 |
| Msa0231380 | Msa1155520 | 0.824070 | 9.850654e-54 | -8.615850e-47 |
| Msa0369050 | Msa1155520 | 0.805463 | 1.318691e-49 | -8.615850e-47 |
| Msa0434920 | Msa1155520 | 0.806511 | 7.941186e-50 | -8.615850e-47 |
| Msa1014500 | Msa1155520 | 0.820152 | 7.978082e-53 | -8.615850e-47 |
| Msa1019240 | Msa1155520 | 0.802732 | 4.878770e-49 | -8.615850e-47 |
| Msa1019260 | Msa1155520 | 0.811786 | 5.882326e-51 | -8.615850e-47 |
| Msa1066490 | Msa1155520 | 0.883926 | 2.964992e-71 | -8.615850e-47 |
| Msa1080290 | Msa1155520 | 0.804355 | 2.247982e-49 | -8.615850e-47 |
| Msa1104140 | Msa1155520 | 0.800933 | 1.142209e-48 | -8.615850e-47 |
| Msa1104210 | Msa1155520 | 0.815470 | 9.092859e-52 | -8.615850e-47 |
| Msa0244780 | Msa1155520 | 0.828616 | 8.140874e-55 | -8.615850e-47 |
| Msa0262310 | Msa1155520 | 0.809865 | 1.531537e-50 | -8.615850e-47 |
| Msa0268130 | Msa1155520 | 0.823068 | 1.689883e-53 | -8.615850e-47 |
| Msa0270660 | Msa1155520 | 0.821652 | 3.602475e-53 | -8.615850e-47 |
| Msa0298990 | Msa1155520 | 0.823237 | 1.543267e-53 | -8.615850e-47 |
| Msa0327300 | Msa1155520 | 0.811145 | 8.103399e-51 | -8.615850e-47 |
| Msa0337650 | Msa1155520 | 0.807088 | 5.996318e-50 | -8.615850e-47 |
| Msa1124110 | Msa1155520 | 0.801003 | 1.105298e-48 | -8.615850e-47 |
| Msa1126510 | Msa1155520 | 0.812098 | 5.029193e-51 | -8.615850e-47 |
| Msa1138870 | Msa1155520 | 0.801775 | 7.680468e-49 | -8.615850e-47 |
| Msa1155520 | Msa1166860 | 0.820984 | 5.138847e-53 | -8.615850e-47 |
| Msa1155520 | Msa1166870 | 0.813408 | 2.598300e-51 | -8.615850e-47 |
| Msa1155520 | Msa1168950 | 0.813734 | 2.203077e-51 | -8.615850e-47 |
| Msa1155520 | Msa1169040 | 0.817201 | 3.727839e-52 | -8.615850e-47 |
| Msa1155520 | Msa1181830 | 0.863793 | 1.932208e-64 | -8.615850e-47 |
| Msa1155520 | Msa1181840 | 0.803095 | 4.104269e-49 | -8.615850e-47 |
| Msa1155520 | Msa1181850 | 0.856456 | 3.179197e-62 | -8.615850e-47 |
| Msa1155520 | Msa1181860 | 0.851544 | 8.284472e-61 | -8.615850e-47 |
| Msa1155520 | Msa1257510 | 0.801977 | 6.980170e-49 | -8.615850e-47 |
| Msa1155520 | Msa1363330 | 0.859287 | 4.589740e-63 | -8.615850e-47 |
| Msa1155520 | Msa1374120 | 0.804940 | 1.697086e-49 | -8.615850e-47 |
| Msa1155520 | Msa1379760 | 0.838615 | 2.588999e-57 | -8.615850e-47 |
| Msa1155520 | Msa1386600 | 0.859316 | 4.500747e-63 | -8.615850e-47 |
| Msa1155520 | Msa1448690 | 0.824392 | 8.275252e-54 | -8.615850e-47 |
| Msa1155520 | Msa1450280 | 0.830083 | 3.586468e-55 | -8.615850e-47 |
| Msa0508590 | Msa1155520 | 0.820161 | 7.940935e-53 | -8.615850e-47 |
| Msa0508630 | Msa1155520 | 0.803942 | 2.740031e-49 | -8.615850e-47 |
| Msa0510940 | Msa1155520 | 0.808634 | 2.812992e-50 | -8.615850e-47 |
| Msa0526540 | Msa1155520 | 0.859470 | 4.045339e-63 | -8.615850e-47 |
| Msa0527150 | Msa1155520 | 0.800379 | 1.481699e-48 | -8.615850e-47 |
| Msa0571920 | Msa1155520 | 0.825006 | 5.931535e-54 | -8.615850e-47 |
| Msa0576940 | Msa1155520 | 0.861318 | 1.115870e-63 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1155520 | MtrunA17_Chr7g0247051 | 94.332 | 247 | 14 | 0 | 1 | 247 | 1 | 247 | 4.93e-178 | 489 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1155520 | AT2G45790.1 | 81.633 | 245 | 45 | 0 | 1 | 245 | 1 | 245 | 1.13e-154 | 430 |
Find 71 sgRNAs with CRISPR-Local
Find 257 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATCTCACTAACCTCTTAAT+AGG | 0.197187 | 7_4:+43467918 | None:intergenic |
| CAAACTCGTCTCTTTCTTCT+TGG | 0.197416 | 7_4:+43467770 | None:intergenic |
| GCATATCATTCAATTAAATT+TGG | 0.223092 | 7_4:-43465920 | Msa1155520:three_prime_UTR |
| AAGCAATCACACCAGGTTTC+AGG | 0.231242 | 7_4:+43469443 | None:intergenic |
| TCTTTCACGTTTCCATTTGT+TGG | 0.294029 | 7_4:-43469865 | Msa1155520:five_prime_UTR |
| CAGAGCTTGAAGACATTCAT+TGG | 0.312804 | 7_4:-43468248 | Msa1155520:CDS |
| ATTGCTTTGTTTGATGTTGA+TGG | 0.316545 | 7_4:-43469427 | Msa1155520:CDS |
| CAGCATATCATTATTGATAC+TGG | 0.333054 | 7_4:-43466054 | Msa1155520:three_prime_UTR |
| TTGTAACGGTTGGAGTTGTT+GGG | 0.339961 | 7_4:-43468744 | Msa1155520:CDS |
| GAGCAGATTCATAAATTTCA+TGG | 0.349247 | 7_4:+43466335 | None:intergenic |
| TGATTAATAATAAGTTATAA+TGG | 0.356912 | 7_4:-43469470 | Msa1155520:exon |
| ATTGTAACGGTTGGAGTTGT+TGG | 0.366862 | 7_4:-43468745 | Msa1155520:CDS |
| GCAGTGTACATCTCTCTTCC+TGG | 0.367520 | 7_4:-43466097 | Msa1155520:CDS |
| CTTTCACGTTTCCATTTGTT+GGG | 0.372057 | 7_4:-43469864 | Msa1155520:five_prime_UTR |
| CACTGCTTGATAGTATCTTC+AGG | 0.385900 | 7_4:+43466114 | None:intergenic |
| TACTGCTTGAGATACCTTGA+TGG | 0.396477 | 7_4:-43467415 | Msa1155520:CDS |
| TGGCTACAGTTTCTCCCAAT+AGG | 0.406761 | 7_4:+43467790 | None:intergenic |
| GCTTCATTACATTGCTGACT+TGG | 0.410076 | 7_4:-43467946 | Msa1155520:CDS |
| GAAGAAGATGGGTCTTGAAT+GGG | 0.410546 | 7_4:+43469777 | None:intergenic |
| GTTTATATAATACTATAGAT+TGG | 0.411696 | 7_4:+43469800 | None:intergenic |
| AAAGAATAGAATACCTTCCT+TGG | 0.425118 | 7_4:+43469391 | None:intergenic |
| ATCTCACTAACCTCTTAATA+GGG | 0.431862 | 7_4:+43467919 | None:intergenic |
| TATGAATCTGCTCGGACTAT+CGG | 0.438872 | 7_4:-43466325 | Msa1155520:CDS |
| AAATAAGAGATTGAAGAAGA+TGG | 0.439100 | 7_4:+43469765 | None:intergenic |
| TGTATGAACTGCAACATCTC+TGG | 0.440563 | 7_4:+43468926 | None:intergenic |
| AATAAGAGATTGAAGAAGAT+GGG | 0.445855 | 7_4:+43469766 | None:intergenic |
| ATGTTGAATGTGTCACCTAT+TGG | 0.447595 | 7_4:-43467805 | Msa1155520:CDS |
| TGAAGAAGATGGGTCTTGAA+TGG | 0.451294 | 7_4:+43469776 | None:intergenic |
| ACTTGGATATCCCTATTAAG+AGG | 0.458360 | 7_4:-43467929 | Msa1155520:intron |
| AGAGCTTGAAGACATTCATT+GGG | 0.460209 | 7_4:-43468247 | Msa1155520:CDS |
| ATGAATCTGCTCGGACTATC+GGG | 0.462025 | 7_4:-43466324 | Msa1155520:CDS |
| CATAAGCAAGGACAGCTCAT+TGG | 0.473469 | 7_4:-43468412 | Msa1155520:CDS |
| AAAACAATAATCATAGTCAT+TGG | 0.476754 | 7_4:+43468456 | None:intergenic |
| TTCAAGTGGGACCCAACAAA+TGG | 0.484081 | 7_4:+43469853 | None:intergenic |
| AGCAATCACACCAGGTTTCA+GGG | 0.498276 | 7_4:+43469444 | None:intergenic |
| TGTAACGGTTGGAGTTGTTG+GGG | 0.499649 | 7_4:-43468743 | Msa1155520:CDS |
| TCTGAGCAACTTGGTCAGAC+AGG | 0.503594 | 7_4:-43468700 | Msa1155520:intron |
| TGTTGAATGTGTCACCTATT+GGG | 0.513383 | 7_4:-43467804 | Msa1155520:CDS |
| TTCAATCTCTTATTTCTACC+TGG | 0.521380 | 7_4:-43469757 | Msa1155520:intron |
| AAGAAGATGGGTCTTGAATG+GGG | 0.522066 | 7_4:+43469778 | None:intergenic |
| ATGAAATTTATGAATCTGCT+CGG | 0.534020 | 7_4:-43466333 | Msa1155520:CDS |
| ATAATGGCTGCCCTGAAACC+TGG | 0.534391 | 7_4:-43469454 | Msa1155520:CDS |
| ACTGCTTGATAGTATCTTCA+GGG | 0.539223 | 7_4:+43466115 | None:intergenic |
| GGTACACAGATTGTAACGGT+TGG | 0.549280 | 7_4:-43468754 | Msa1155520:intron |
| CATTTATTGAGTTCCGTAGT+GGG | 0.550324 | 7_4:-43467828 | Msa1155520:CDS |
| AGCAATGATTTACATAGGAG+AGG | 0.551697 | 7_4:-43466020 | Msa1155520:three_prime_UTR |
| AAAGCTTATCTGTCCTCCAA+TGG | 0.558484 | 7_4:+43467558 | None:intergenic |
| CAGTGTACATCTCTCTTCCT+GGG | 0.558609 | 7_4:-43466096 | Msa1155520:CDS |
| CTTGATAGTATCTTCAGGGC+TGG | 0.567801 | 7_4:+43466119 | None:intergenic |
| CATTGGGAATGAACAGCTCA+AGG | 0.568497 | 7_4:-43468231 | Msa1155520:intron |
| GGATTTCATTGAAACCATCA+AGG | 0.573964 | 7_4:+43467401 | None:intergenic |
| CATGGAGCAATGATTTACAT+AGG | 0.582791 | 7_4:-43466025 | Msa1155520:three_prime_UTR |
| GCAATGATTTACATAGGAGA+GGG | 0.586601 | 7_4:-43466019 | Msa1155520:three_prime_UTR |
| TATCATGGTACTTCACATTG+TGG | 0.588852 | 7_4:-43465955 | Msa1155520:three_prime_UTR |
| ACATTTATTGAGTTCCGTAG+TGG | 0.588865 | 7_4:-43467829 | Msa1155520:CDS |
| AGGACAGCTCATTGGAACTC+AGG | 0.590199 | 7_4:-43468404 | Msa1155520:intron |
| GTAAAGATATCTGAGCAACT+TGG | 0.594397 | 7_4:-43468709 | Msa1155520:CDS |
| TTTGGGTACACAGATTGTAA+CGG | 0.605387 | 7_4:-43468758 | Msa1155520:intron |
| ATGGAACTCTTACAGCTCCA+AGG | 0.610758 | 7_4:-43469408 | Msa1155520:CDS |
| GGTCTTGTGGCTCATAAGCA+AGG | 0.614182 | 7_4:-43468424 | Msa1155520:CDS |
| GTAACGGTTGGAGTTGTTGG+GGG | 0.614289 | 7_4:-43468742 | Msa1155520:CDS |
| AACTCTTACAGCTCCAAGGA+AGG | 0.622019 | 7_4:-43469404 | Msa1155520:intron |
| TATTGATACTGGAAACAACA+TGG | 0.628384 | 7_4:-43466043 | Msa1155520:three_prime_UTR |
| AGTTGAAGAGAAGATTCAAG+TGG | 0.634220 | 7_4:+43469839 | None:intergenic |
| CGAGTTTGAGAAGTATGACA+AGG | 0.638409 | 7_4:-43467755 | Msa1155520:intron |
| ATAATTATATTCGAATCATG+TGG | 0.657166 | 7_4:+43465996 | None:intergenic |
| GTTCATACAAGATCTACGAA+AGG | 0.660966 | 7_4:-43468912 | Msa1155520:intron |
| ACACATTCAACATCCCACTA+CGG | 0.661979 | 7_4:+43467815 | None:intergenic |
| TCAAACAAAGCAATCACACC+AGG | 0.663993 | 7_4:+43469436 | None:intergenic |
| GCTCGGACTATCGGGCACAC+AGG | 0.676461 | 7_4:-43466316 | Msa1155520:intron |
| GTTGAAGAGAAGATTCAAGT+GGG | 0.678342 | 7_4:+43469840 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGATTAATAATAAGTTATAA+TGG | - | chr7_4:43466344-43466363 | Msa1155520:CDS | 10.0% |
| !!! | AAATTTTTCTTATATAGATT+AGG | + | chr7_4:43467958-43467977 | None:intergenic | 10.0% |
| !!! | ATCTATATAAGAAAAATTTT+AGG | - | chr7_4:43467959-43467978 | Msa1155520:CDS | 10.0% |
| !!! | TCTATATAAGAAAAATTTTA+GGG | - | chr7_4:43467960-43467979 | Msa1155520:CDS | 10.0% |
| !!! | AATCAATTTTAGGATATTTA+GGG | + | chr7_4:43465921-43465940 | None:intergenic | 15.0% |
| !! | GTTTATATAATACTATAGAT+TGG | + | chr7_4:43466017-43466036 | None:intergenic | 15.0% |
| !! | AACAGTTGTTAAATAATTAA+TGG | - | chr7_4:43466628-43466647 | Msa1155520:intron | 15.0% |
| !!! | CTATATAAGAAAAATTTTAG+GGG | - | chr7_4:43467961-43467980 | Msa1155520:CDS | 15.0% |
| !! | AAAGATAATTAACAACATAA+TGG | - | chr7_4:43468715-43468734 | Msa1155520:CDS | 15.0% |
| !! | AATGAAAAAGATAAAAGTTT+AGG | + | chr7_4:43469436-43469455 | None:intergenic | 15.0% |
| !!! | GAATCAATTTTAGGATATTT+AGG | + | chr7_4:43465922-43465941 | None:intergenic | 20.0% |
| !!! | GAGAATAAAGAATCAATTTT+AGG | + | chr7_4:43465931-43465950 | None:intergenic | 20.0% |
| !!! | AAATAGTTTTTTTTGCTTGA+AGG | - | chr7_4:43466283-43466302 | Msa1155520:intron | 20.0% |
| !! | TAAATAATTAATGGTTATGC+TGG | - | chr7_4:43466637-43466656 | Msa1155520:intron | 20.0% |
| !!! | ATTTCTTATTTCTGATTGTT+TGG | - | chr7_4:43466814-43466833 | Msa1155520:intron | 20.0% |
| !!! | TTTGTGAAAAAAATCGATTT+TGG | - | chr7_4:43467205-43467224 | Msa1155520:intron | 20.0% |
| !! | AAAACAATAATCATAGTCAT+TGG | + | chr7_4:43467361-43467380 | None:intergenic | 20.0% |
| !! | GAATAGGAAAAGAAATATAT+AGG | + | chr7_4:43467615-43467634 | None:intergenic | 20.0% |
| !!! | AATAACATAATGTATTTTGC+AGG | - | chr7_4:43467829-43467848 | Msa1155520:CDS | 20.0% |
| !!! | TCTTTAATTTGAATTGCTAA+AGG | - | chr7_4:43468124-43468143 | Msa1155520:intron | 20.0% |
| !!! | TTATTTTTTGGTTAAGTGAT+AGG | - | chr7_4:43468314-43468333 | Msa1155520:intron | 20.0% |
| !! | ATTATATATATGTACTCTAC+AGG | - | chr7_4:43468350-43468369 | Msa1155520:intron | 20.0% |
| !! | TAGTACTTCACAATAAATTA+TGG | + | chr7_4:43468471-43468490 | None:intergenic | 20.0% |
| !! | TTGTGTAACAAGAATTTATT+TGG | - | chr7_4:43468594-43468613 | Msa1155520:intron | 20.0% |
| !! | AATTACCTAAAATCAATCAA+TGG | - | chr7_4:43468628-43468647 | Msa1155520:intron | 20.0% |
| !!! | TTTAAGAACTTTCAATTTTG+TGG | - | chr7_4:43469164-43469183 | Msa1155520:intron | 20.0% |
| !! | TCTAATTTATAATTCCATGA+TGG | + | chr7_4:43469286-43469305 | None:intergenic | 20.0% |
| !! | TGGAATTATAAATTAGATCT+TGG | - | chr7_4:43469289-43469308 | Msa1155520:intron | 20.0% |
| !! | ATAATTATATTCGAATCATG+TGG | + | chr7_4:43469821-43469840 | None:intergenic | 20.0% |
| !!! | TTCTGATTGTAATTTTATCA+TGG | - | chr7_4:43469844-43469863 | Msa1155520:five_prime_UTR | 20.0% |
| !! | GCATATCATTCAATTAAATT+TGG | - | chr7_4:43469894-43469913 | Msa1155520:five_prime_UTR | 20.0% |
| ! | AATAAGAGATTGAAGAAGAT+GGG | + | chr7_4:43466051-43466070 | None:intergenic | 25.0% |
| ! | AAATAAGAGATTGAAGAAGA+TGG | + | chr7_4:43466052-43466071 | None:intergenic | 25.0% |
| ! | TTTACCTCATATAACAACTT+GGG | - | chr7_4:43466120-43466139 | Msa1155520:CDS | 25.0% |
| ! | GGTCATATTTATTTACTCAT+GGG | - | chr7_4:43466141-43466160 | Msa1155520:intron | 25.0% |
| !!! | ACTTTCATTGGGATTTTTTT+TGG | - | chr7_4:43466253-43466272 | Msa1155520:intron | 25.0% |
| !! | GAAAAGGTTCATAATTTTGT+AGG | - | chr7_4:43466311-43466330 | Msa1155520:intron | 25.0% |
| !! | GTTCATAATTTTGTAGGTTA+AGG | - | chr7_4:43466317-43466336 | Msa1155520:CDS | 25.0% |
| !! | ATTTTACAATAAGTGAACTG+AGG | + | chr7_4:43466757-43466776 | None:intergenic | 25.0% |
| !! | TATTTCTGATTGTTTGGATT+TGG | - | chr7_4:43466820-43466839 | Msa1155520:intron | 25.0% |
| ! | AACAAAAAAGAGCAAAGAAT+AGG | + | chr7_4:43467003-43467022 | None:intergenic | 25.0% |
| !!! | AATCGATTTTTTTCACAAAG+TGG | + | chr7_4:43467204-43467223 | None:intergenic | 25.0% |
| ! | CATCCATTAAAATAACATAC+TGG | - | chr7_4:43467274-43467293 | Msa1155520:intron | 25.0% |
| !!! | AGACCAGTATGTTATTTTAA+TGG | + | chr7_4:43467280-43467299 | None:intergenic | 25.0% |
| !!! | GATTATTGTTTTTCTGAGAA+TGG | - | chr7_4:43467369-43467388 | Msa1155520:intron | 25.0% |
| ! | TATTCAATTACAGATTGAGT+TGG | + | chr7_4:43467443-43467462 | None:intergenic | 25.0% |
| ! | CATTATAAAGCTTAGAAGAT+AGG | - | chr7_4:43467726-43467745 | Msa1155520:intron | 25.0% |
| !!! | GATACGGTGAATTTATTTTT+TGG | - | chr7_4:43468302-43468321 | Msa1155520:intron | 25.0% |
| ! | TATATATAATCAAGACCTGT+TGG | + | chr7_4:43468340-43468359 | None:intergenic | 25.0% |
| !!! | TTCAATGAAATCCACTTTTT+TGG | - | chr7_4:43468423-43468442 | Msa1155520:CDS | 25.0% |
| !!! | AAGTTTTATCACCAAAAAAG+TGG | + | chr7_4:43468437-43468456 | None:intergenic | 25.0% |
| !!! | TTTTGGTGATAAAACTTACA+AGG | - | chr7_4:43468440-43468459 | Msa1155520:CDS | 25.0% |
| !!! | CATAACCATTGATTGATTTT+AGG | + | chr7_4:43468636-43468655 | None:intergenic | 25.0% |
| ! | CTAAAATCAATCAATGGTTA+TGG | - | chr7_4:43468634-43468653 | Msa1155520:intron | 25.0% |
| !! | TCATAAACTGACTAAAGTTT+TGG | + | chr7_4:43468754-43468773 | None:intergenic | 25.0% |
| ! | AAACTTTAGTCAGTTTATGA+TGG | - | chr7_4:43468754-43468773 | Msa1155520:intron | 25.0% |
| ! | AAAAAATGTAACACTGAGAA+AGG | + | chr7_4:43469078-43469097 | None:intergenic | 25.0% |
| !! | ATGCAAAAATCTAAAATGGT+GGG | + | chr7_4:43469125-43469144 | None:intergenic | 25.0% |
| !! | AATGCAAAAATCTAAAATGG+TGG | + | chr7_4:43469126-43469145 | None:intergenic | 25.0% |
| !! | ACCATTTTAGATTTTTGCAT+TGG | - | chr7_4:43469125-43469144 | Msa1155520:intron | 25.0% |
| !! | CCATTTTAGATTTTTGCATT+GGG | - | chr7_4:43469126-43469145 | Msa1155520:intron | 25.0% |
| ! | CTAAGTAGAAAGAAAATATG+TGG | + | chr7_4:43469234-43469253 | None:intergenic | 25.0% |
| !! | ATTTTCTTTCTACTTAGTTG+TGG | - | chr7_4:43469237-43469256 | Msa1155520:intron | 25.0% |
| !!! | AGCTTTTTTTTCTCTTTTTC+CGG | + | chr7_4:43469365-43469384 | None:intergenic | 25.0% |
| ! | ATATCTCTATACAATGCTTA+GGG | + | chr7_4:43469389-43469408 | None:intergenic | 25.0% |
| ! | TATATCTCTATACAATGCTT+AGG | + | chr7_4:43469390-43469409 | None:intergenic | 25.0% |
| !! | TAAGCATTGTATAGAGATAT+AGG | - | chr7_4:43469389-43469408 | Msa1155520:intron | 25.0% |
| ! | ATGAAATTTATGAATCTGCT+CGG | - | chr7_4:43469481-43469500 | Msa1155520:five_prime_UTR | 25.0% |
| ! | ACTAAAAACCAAATAAATGC+TGG | - | chr7_4:43469616-43469635 | Msa1155520:intron | 25.0% |
| !!! | AAATAAATGCTGGTTCAAAA+CGG | - | chr7_4:43469626-43469645 | Msa1155520:intron | 25.0% |
| !! | GGAAAGTTTTCAATTTTGAC+AGG | + | chr7_4:43465900-43465919 | None:intergenic | 30.0% |
| !! | TTCAATCTCTTATTTCTACC+TGG | - | chr7_4:43466057-43466076 | Msa1155520:three_prime_UTR | 30.0% |
| ATGAAGAAGTGATAATTACC+AGG | + | chr7_4:43466078-43466097 | None:intergenic | 30.0% | |
| CTTTACCTCATATAACAACT+TGG | - | chr7_4:43466119-43466138 | Msa1155520:CDS | 30.0% | |
| GGGTCATATTTATTTACTCA+TGG | - | chr7_4:43466140-43466159 | Msa1155520:intron | 30.0% | |
| ! | CATGAAGTAAAAACAGCTTT+TGG | - | chr7_4:43466226-43466245 | Msa1155520:intron | 30.0% |
| !!! | CTTTTGGAACTACTTTCATT+GGG | - | chr7_4:43466242-43466261 | Msa1155520:intron | 30.0% |
| !! | ATTGCTTTGTTTGATGTTGA+TGG | - | chr7_4:43466387-43466406 | Msa1155520:intron | 30.0% |
| AAAGAATAGAATACCTTCCT+TGG | + | chr7_4:43466426-43466445 | None:intergenic | 30.0% | |
| CTGAACAAAACTAAACAATG+TGG | - | chr7_4:43466791-43466810 | Msa1155520:intron | 30.0% | |
| AGAATAGGTTTATGCATGAT+TGG | + | chr7_4:43466988-43467007 | None:intergenic | 30.0% | |
| TGTTGAATCTTGCATTGTTT+GGG | - | chr7_4:43467039-43467058 | Msa1155520:intron | 30.0% | |
| TGAAGCATAATAAACCAAAG+TGG | + | chr7_4:43467153-43467172 | None:intergenic | 30.0% | |
| AATCTACTTGAATACATCGT+TGG | + | chr7_4:43467481-43467500 | None:intergenic | 30.0% | |
| ACAAAAAGTTAACGACATAG+GGG | + | chr7_4:43467512-43467531 | None:intergenic | 30.0% | |
| CACAAAAAGTTAACGACATA+GGG | + | chr7_4:43467513-43467532 | None:intergenic | 30.0% | |
| ACACAAAAAGTTAACGACAT+AGG | + | chr7_4:43467514-43467533 | None:intergenic | 30.0% | |
| AAGAAATTCACAACTCATCT+TGG | + | chr7_4:43467543-43467562 | None:intergenic | 30.0% | |
| AGATGTGTAATGTCTTGAAT+AGG | + | chr7_4:43467631-43467650 | None:intergenic | 30.0% | |
| TTAGAAGATAGGTGAATGAA+GGG | - | chr7_4:43467737-43467756 | Msa1155520:intron | 30.0% | |
| ATCTCACTAACCTCTTAATA+GGG | + | chr7_4:43467898-43467917 | None:intergenic | 30.0% | |
| AATCTCACTAACCTCTTAAT+AGG | + | chr7_4:43467899-43467918 | None:intergenic | 30.0% | |
| ! | GACTCATATTGCAAATTTTC+AGG | + | chr7_4:43468161-43468180 | None:intergenic | 30.0% |
| !! | CTTAACTTGACATTTTCCAT+TGG | - | chr7_4:43468240-43468259 | Msa1155520:CDS | 30.0% |
| ! | TATGCATGATTTTCATGAAC+AGG | + | chr7_4:43468557-43468576 | None:intergenic | 30.0% |
| AAAATCATGCATATGAATCG+AGG | - | chr7_4:43468564-43468583 | Msa1155520:intron | 30.0% | |
| !! | TAAACTGACTAAAGTTTTGG+AGG | + | chr7_4:43468751-43468770 | None:intergenic | 30.0% |
| ! | TGCAAAAATCTAAAATGGTG+GGG | + | chr7_4:43469124-43469143 | None:intergenic | 30.0% |
| CCCAATGCAAAAATCTAAAA+TGG | + | chr7_4:43469129-43469148 | None:intergenic | 30.0% | |
| AAAGAAAATATGTGGAGTCT+CGG | + | chr7_4:43469226-43469245 | None:intergenic | 30.0% | |
| ! | CATTTTCACTTTATCCATCA+TGG | - | chr7_4:43469269-43469288 | Msa1155520:intron | 30.0% |
| !! | CTGTTTTATGATGATGTCAA+AGG | - | chr7_4:43469330-43469349 | Msa1155520:intron | 30.0% |
| ! | TTTTTCATTTTCACTGAGCA+GGG | - | chr7_4:43469447-43469466 | Msa1155520:CDS | 30.0% |
| GAGCAGATTCATAAATTTCA+TGG | + | chr7_4:43469482-43469501 | None:intergenic | 30.0% | |
| TATCATCATATGTACTTGTG+TGG | - | chr7_4:43469538-43469557 | Msa1155520:intron | 30.0% | |
| TTCACCATGTAACTGAAATT+CGG | + | chr7_4:43469570-43469589 | None:intergenic | 30.0% | |
| !! | GTTTTGAACCAGCATTTATT+TGG | + | chr7_4:43469627-43469646 | None:intergenic | 30.0% |
| CAGCATATCATTATTGATAC+TGG | - | chr7_4:43469760-43469779 | Msa1155520:five_prime_UTR | 30.0% | |
| TATTGATACTGGAAACAACA+TGG | - | chr7_4:43469771-43469790 | Msa1155520:five_prime_UTR | 30.0% | |
| TCTTTCACGTTTCCATTTGT+TGG | - | chr7_4:43465949-43465968 | Msa1155520:three_prime_UTR | 35.0% | |
| CTTTCACGTTTCCATTTGTT+GGG | - | chr7_4:43465950-43465969 | Msa1155520:three_prime_UTR | 35.0% | |
| GTTGAAGAGAAGATTCAAGT+GGG | + | chr7_4:43465977-43465996 | None:intergenic | 35.0% | |
| AGTTGAAGAGAAGATTCAAG+TGG | + | chr7_4:43465978-43465997 | None:intergenic | 35.0% | |
| ATGACCCAAGTTGTTATATG+AGG | + | chr7_4:43466127-43466146 | None:intergenic | 35.0% | |
| !!! | GCTTTTGGAACTACTTTCAT+TGG | - | chr7_4:43466241-43466260 | Msa1155520:intron | 35.0% |
| ATAATGACACTCCATCAGTA+GGG | - | chr7_4:43466451-43466470 | Msa1155520:intron | 35.0% | |
| CAAGAAAATAACCCTACTGA+TGG | + | chr7_4:43466465-43466484 | None:intergenic | 35.0% | |
| AACAACAATGTTGCCTATTG+CGG | + | chr7_4:43466716-43466735 | None:intergenic | 35.0% | |
| !!! | TTGTTTAGTTTTGTTCAGCG+AGG | + | chr7_4:43466789-43466808 | None:intergenic | 35.0% |
| GTTCATACAAGATCTACGAA+AGG | - | chr7_4:43466902-43466921 | Msa1155520:intron | 35.0% | |
| CTGTTGAATCTTGCATTGTT+TGG | - | chr7_4:43467038-43467057 | Msa1155520:intron | 35.0% | |
| TTTGGGTACACAGATTGTAA+CGG | - | chr7_4:43467056-43467075 | Msa1155520:intron | 35.0% | |
| GTAAAGATATCTGAGCAACT+TGG | - | chr7_4:43467105-43467124 | Msa1155520:intron | 35.0% | |
| GTTAGCTATAAGTTCCACTT+TGG | - | chr7_4:43467136-43467155 | Msa1155520:intron | 35.0% | |
| !! | CTTCAGTGTTTTGAACATGT+AGG | - | chr7_4:43467168-43467187 | Msa1155520:intron | 35.0% |
| GAGCAAAGAAGAAGAAAGTA+GGG | + | chr7_4:43467255-43467274 | None:intergenic | 35.0% | |
| TGAGCAAAGAAGAAGAAAGT+AGG | + | chr7_4:43467256-43467275 | None:intergenic | 35.0% | |
| GTAACTGCAACAAGCAAATA+GGG | + | chr7_4:43467339-43467358 | None:intergenic | 35.0% | |
| !! | TTTTTCTGAGAATGGTCTTG+TGG | - | chr7_4:43467377-43467396 | Msa1155520:CDS | 35.0% |
| !! | TCAATTACAGATTGAGTTGG+TGG | + | chr7_4:43467440-43467459 | None:intergenic | 35.0% |
| AGAGCTTGAAGACATTCATT+GGG | - | chr7_4:43467567-43467586 | Msa1155520:CDS | 35.0% | |
| TATTTATAGTGTGCCTAGCA+TGG | + | chr7_4:43467670-43467689 | None:intergenic | 35.0% | |
| CTTAGAAGATAGGTGAATGA+AGG | - | chr7_4:43467736-43467755 | Msa1155520:intron | 35.0% | |
| TAGAAGATAGGTGAATGAAG+GGG | - | chr7_4:43467738-43467757 | Msa1155520:intron | 35.0% | |
| ACTTGGATATCCCTATTAAG+AGG | - | chr7_4:43467885-43467904 | Msa1155520:intron | 35.0% | |
| ACATTTATTGAGTTCCGTAG+TGG | - | chr7_4:43467985-43468004 | Msa1155520:intron | 35.0% | |
| CATTTATTGAGTTCCGTAGT+GGG | - | chr7_4:43467986-43468005 | Msa1155520:intron | 35.0% | |
| ATGTTGAATGTGTCACCTAT+TGG | - | chr7_4:43468009-43468028 | Msa1155520:intron | 35.0% | |
| TGTTGAATGTGTCACCTATT+GGG | - | chr7_4:43468010-43468029 | Msa1155520:intron | 35.0% | |
| AATTTGCAATATGAGTCCTC+AGG | - | chr7_4:43468164-43468183 | Msa1155520:intron | 35.0% | |
| TCAGAACATACGCTCAAAAA+TGG | - | chr7_4:43468188-43468207 | Msa1155520:intron | 35.0% | |
| ! | AACTTGACATTTTCCATTGG+AGG | - | chr7_4:43468243-43468262 | Msa1155520:CDS | 35.0% |
| GTCACGATCTTCATATGATA+CGG | - | chr7_4:43468286-43468305 | Msa1155520:intron | 35.0% | |
| ! | ATGTTTTATCCCAACCTTGA+GGG | + | chr7_4:43468380-43468399 | None:intergenic | 35.0% |
| ! | TATGTTTTATCCCAACCTTG+AGG | + | chr7_4:43468381-43468400 | None:intergenic | 35.0% |
| GGATTTCATTGAAACCATCA+AGG | + | chr7_4:43468416-43468435 | None:intergenic | 35.0% | |
| AACAGGATAAGATAATTCGC+CGG | + | chr7_4:43468540-43468559 | None:intergenic | 35.0% | |
| ACAATTCTCTTGCAAAGTGA+AGG | + | chr7_4:43468781-43468800 | None:intergenic | 35.0% | |
| AAATGGGAATTGCGCAAAAA+TGG | + | chr7_4:43468846-43468865 | None:intergenic | 35.0% | |
| CTTATTGAAGCCAATTTCCA+TGG | + | chr7_4:43469034-43469053 | None:intergenic | 35.0% | |
| ATGTCAAAGGAAATTGCAAC+CGG | - | chr7_4:43469343-43469362 | Msa1155520:intron | 35.0% | |
| !! | CTTTTTCATTTTCACTGAGC+AGG | - | chr7_4:43469446-43469465 | Msa1155520:CDS | 35.0% |
| ATGACCGAATTTCAGTTACA+TGG | - | chr7_4:43469563-43469582 | Msa1155520:intron | 35.0% | |
| ACGATCAATATTAACGCGTA+AGG | + | chr7_4:43469665-43469684 | None:intergenic | 35.0% | |
| ! | ACTGCTTGATAGTATCTTCA+GGG | + | chr7_4:43469702-43469721 | None:intergenic | 35.0% |
| TGCAAAAATCTTAATGTCCC+AGG | + | chr7_4:43469738-43469757 | None:intergenic | 35.0% | |
| CATGGAGCAATGATTTACAT+AGG | - | chr7_4:43469789-43469808 | Msa1155520:five_prime_UTR | 35.0% | |
| AGCAATGATTTACATAGGAG+AGG | - | chr7_4:43469794-43469813 | Msa1155520:five_prime_UTR | 35.0% | |
| GCAATGATTTACATAGGAGA+GGG | - | chr7_4:43469795-43469814 | Msa1155520:five_prime_UTR | 35.0% | |
| TATCATGGTACTTCACATTG+TGG | - | chr7_4:43469859-43469878 | Msa1155520:five_prime_UTR | 35.0% | |
| AAGAAGATGGGTCTTGAATG+GGG | + | chr7_4:43466039-43466058 | None:intergenic | 40.0% | |
| GAAGAAGATGGGTCTTGAAT+GGG | + | chr7_4:43466040-43466059 | None:intergenic | 40.0% | |
| TGAAGAAGATGGGTCTTGAA+TGG | + | chr7_4:43466041-43466060 | None:intergenic | 40.0% | |
| TTGCTTGAAGGTTGCTGAAA+AGG | - | chr7_4:43466295-43466314 | Msa1155520:intron | 40.0% | |
| TCAAACAAAGCAATCACACC+AGG | + | chr7_4:43466381-43466400 | None:intergenic | 40.0% | |
| GATAATGACACTCCATCAGT+AGG | - | chr7_4:43466450-43466469 | Msa1155520:intron | 40.0% | |
| TGTTGCCTACTCAATTGCTA+GGG | - | chr7_4:43466858-43466877 | Msa1155520:intron | 40.0% | |
| TGTATGAACTGCAACATCTC+TGG | + | chr7_4:43466891-43466910 | None:intergenic | 40.0% | |
| ATTGTAACGGTTGGAGTTGT+TGG | - | chr7_4:43467069-43467088 | Msa1155520:intron | 40.0% | |
| TTGTAACGGTTGGAGTTGTT+GGG | - | chr7_4:43467070-43467089 | Msa1155520:intron | 40.0% | |
| GGTAACTGCAACAAGCAAAT+AGG | + | chr7_4:43467340-43467359 | None:intergenic | 40.0% | |
| CTTGAATACATCGTTGGTCA+CGG | + | chr7_4:43467475-43467494 | None:intergenic | 40.0% | |
| CAGAGCTTGAAGACATTCAT+TGG | - | chr7_4:43467566-43467585 | Msa1155520:CDS | 40.0% | |
| GAATGAACAGCTCAAGGTAA+AGG | - | chr7_4:43467589-43467608 | Msa1155520:CDS | 40.0% | |
| ! | GCTTCATTACATTGCTGACT+TGG | - | chr7_4:43467868-43467887 | Msa1155520:intron | 40.0% |
| ACACATTCAACATCCCACTA+CGG | + | chr7_4:43468002-43468021 | None:intergenic | 40.0% | |
| CAAACTCGTCTCTTTCTTCT+TGG | + | chr7_4:43468047-43468066 | None:intergenic | 40.0% | |
| ! | CGAGTTTGAGAAGTATGACA+AGG | - | chr7_4:43468059-43468078 | Msa1155520:intron | 40.0% |
| AAAGCTTATCTGTCCTCCAA+TGG | + | chr7_4:43468259-43468278 | None:intergenic | 40.0% | |
| TACTGCTTGAGATACCTTGA+TGG | - | chr7_4:43468399-43468418 | Msa1155520:intron | 40.0% | |
| !! | CGAGTCTCTTCTAGAATGAA+GGG | + | chr7_4:43468695-43468714 | None:intergenic | 40.0% |
| !! | TCGAGTCTCTTCTAGAATGA+AGG | + | chr7_4:43468696-43468715 | None:intergenic | 40.0% |
| ! | AATTTGTTCCTCGGCGATTA+GGG | + | chr7_4:43468870-43468889 | None:intergenic | 40.0% |
| CTCTCATGAATCAGGAAGTA+TGG | - | chr7_4:43468975-43468994 | Msa1155520:intron | 40.0% | |
| CAATTTCCATGGCATTGCTA+TGG | + | chr7_4:43469023-43469042 | None:intergenic | 40.0% | |
| CATAGCAATGCCATGGAAAT+TGG | - | chr7_4:43469021-43469040 | Msa1155520:intron | 40.0% | |
| ! | AAAATCTAAAATGGTGGGGC+AGG | + | chr7_4:43469120-43469139 | None:intergenic | 40.0% |
| TATGAATCTGCTCGGACTAT+CGG | - | chr7_4:43469489-43469508 | Msa1155520:intron | 40.0% | |
| ATTAACGCGTAAGGTTCACA+TGG | + | chr7_4:43469656-43469675 | None:intergenic | 40.0% | |
| ! | CACTGCTTGATAGTATCTTC+AGG | + | chr7_4:43469703-43469722 | None:intergenic | 40.0% |
| TTCAAGTGGGACCCAACAAA+TGG | + | chr7_4:43465964-43465983 | None:intergenic | 45.0% | |
| AGCAATCACACCAGGTTTCA+GGG | + | chr7_4:43466373-43466392 | None:intergenic | 45.0% | |
| AAGCAATCACACCAGGTTTC+AGG | + | chr7_4:43466374-43466393 | None:intergenic | 45.0% | |
| ATGGAACTCTTACAGCTCCA+AGG | - | chr7_4:43466406-43466425 | Msa1155520:intron | 45.0% | |
| AACTCTTACAGCTCCAAGGA+AGG | - | chr7_4:43466410-43466429 | Msa1155520:intron | 45.0% | |
| TTGCGGATCGTGGAAAACAA+CGG | + | chr7_4:43466699-43466718 | None:intergenic | 45.0% | |
| ! | TGTTTTCCACGATCCGCAAT+AGG | - | chr7_4:43466700-43466719 | Msa1155520:intron | 45.0% |
| CTGTTGCCTACTCAATTGCT+AGG | - | chr7_4:43466857-43466876 | Msa1155520:intron | 45.0% | |
| GTTGCCTACTCAATTGCTAG+GGG | - | chr7_4:43466859-43466878 | Msa1155520:intron | 45.0% | |
| TTGCCTACTCAATTGCTAGG+GGG | - | chr7_4:43466860-43466879 | Msa1155520:intron | 45.0% | |
| ! | CAAGATCTACGAAAGGTGTG+TGG | - | chr7_4:43466909-43466928 | Msa1155520:intron | 45.0% |
| ! | TCTACGAAAGGTGTGTGGTT+TGG | - | chr7_4:43466914-43466933 | Msa1155520:intron | 45.0% |
| GGTACACAGATTGTAACGGT+TGG | - | chr7_4:43467060-43467079 | Msa1155520:intron | 45.0% | |
| TGTAACGGTTGGAGTTGTTG+GGG | - | chr7_4:43467071-43467090 | Msa1155520:intron | 45.0% | |
| TGCAACAAGCAAATAGGGAC+AGG | + | chr7_4:43467334-43467353 | None:intergenic | 45.0% | |
| CATAAGCAAGGACAGCTCAT+TGG | - | chr7_4:43467402-43467421 | Msa1155520:CDS | 45.0% | |
| CATTGGGAATGAACAGCTCA+AGG | - | chr7_4:43467583-43467602 | Msa1155520:CDS | 45.0% | |
| !!! | TTTTCTGAGACTGCCATGCT+AGG | - | chr7_4:43467654-43467673 | Msa1155520:intron | 45.0% |
| TGGCTACAGTTTCTCCCAAT+AGG | + | chr7_4:43468027-43468046 | None:intergenic | 45.0% | |
| TGGTTAAGTGATAGGCCAAC+AGG | - | chr7_4:43468322-43468341 | Msa1155520:intron | 45.0% | |
| ! | ACTCTACAGGTTTTCCCTCA+AGG | - | chr7_4:43468363-43468382 | Msa1155520:intron | 45.0% |
| ! | TACAGGTTTTCCCTCAAGGT+TGG | - | chr7_4:43468367-43468386 | Msa1155520:intron | 45.0% |
| ! | ACAGGTTTTCCCTCAAGGTT+GGG | - | chr7_4:43468368-43468387 | Msa1155520:intron | 45.0% |
| !! | GCGCAAAAATGGACTGCTTA+TGG | + | chr7_4:43468835-43468854 | None:intergenic | 45.0% |
| ! | CAATTTGTTCCTCGGCGATT+AGG | + | chr7_4:43468871-43468890 | None:intergenic | 45.0% |
| ATCGCCGAGGAACAAATTGA+AGG | - | chr7_4:43468872-43468891 | Msa1155520:intron | 45.0% | |
| ! | CTGGCCTTCAATTTGTTCCT+CGG | + | chr7_4:43468879-43468898 | None:intergenic | 45.0% |
| AACAAATTGAAGGCCAGCCA+TGG | - | chr7_4:43468882-43468901 | Msa1155520:intron | 45.0% | |
| AATTCTCACCCCAAGACCTA+TGG | - | chr7_4:43468921-43468940 | Msa1155520:CDS | 45.0% | |
| AACTAGGTCCATAGGTCTTG+GGG | + | chr7_4:43468932-43468951 | None:intergenic | 45.0% | |
| GAACTAGGTCCATAGGTCTT+GGG | + | chr7_4:43468933-43468952 | None:intergenic | 45.0% | |
| AGAACTAGGTCCATAGGTCT+TGG | + | chr7_4:43468934-43468953 | None:intergenic | 45.0% | |
| ! | ACACGAAAGGTGTGAGAACT+AGG | + | chr7_4:43468948-43468967 | None:intergenic | 45.0% |
| TTCTCACACCTTTCGTGTGT+GGG | - | chr7_4:43468950-43468969 | Msa1155520:intron | 45.0% | |
| TGTGGGAACTCTCATGAATC+AGG | - | chr7_4:43468967-43468986 | Msa1155520:intron | 45.0% | |
| ! | GGAAGTATGGTCTCATGTTG+CGG | - | chr7_4:43468988-43469007 | Msa1155520:intron | 45.0% |
| GAAGTATGGTCTCATGTTGC+GGG | - | chr7_4:43468989-43469008 | Msa1155520:intron | 45.0% | |
| ! | TTCATTTTCACTGAGCAGGG+TGG | - | chr7_4:43469450-43469469 | Msa1155520:CDS | 45.0% |
| ATGAATCTGCTCGGACTATC+GGG | - | chr7_4:43469490-43469509 | Msa1155520:intron | 45.0% | |
| ! | CTTGATAGTATCTTCAGGGC+TGG | + | chr7_4:43469698-43469717 | None:intergenic | 45.0% |
| CAGTGTACATCTCTCTTCCT+GGG | - | chr7_4:43469718-43469737 | Msa1155520:intron | 45.0% | |
| ATAATGGCTGCCCTGAAACC+TGG | - | chr7_4:43466360-43466379 | Msa1155520:intron | 50.0% | |
| ATGTTGCCTATTGCGGATCG+TGG | + | chr7_4:43466709-43466728 | None:intergenic | 50.0% | |
| TAGCCCCCTAGCAATTGAGT+AGG | + | chr7_4:43466866-43466885 | None:intergenic | 50.0% | |
| GTAACGGTTGGAGTTGTTGG+GGG | - | chr7_4:43467072-43467091 | Msa1155520:intron | 50.0% | |
| TCTGAGCAACTTGGTCAGAC+AGG | - | chr7_4:43467114-43467133 | Msa1155520:intron | 50.0% | |
| ! | GGTCTTGTGGCTCATAAGCA+AGG | - | chr7_4:43467390-43467409 | Msa1155520:CDS | 50.0% |
| AGGACAGCTCATTGGAACTC+AGG | - | chr7_4:43467410-43467429 | Msa1155520:CDS | 50.0% | |
| GAATACATCGTTGGTCACGG+TGG | + | chr7_4:43467472-43467491 | None:intergenic | 50.0% | |
| ! | GAGCGTATGTTCTGAACCTG+AGG | + | chr7_4:43468183-43468202 | None:intergenic | 50.0% |
| GCCTCTGTGCATTCATATGC+CGG | - | chr7_4:43468518-43468537 | Msa1155520:intron | 50.0% | |
| CCTCGGCGATTAGGGAAAAT+GGG | + | chr7_4:43468862-43468881 | None:intergenic | 50.0% | |
| TCCTCGGCGATTAGGGAAAA+TGG | + | chr7_4:43468863-43468882 | None:intergenic | 50.0% | |
| TCCACACATTGGAGTGACCA+TGG | + | chr7_4:43468902-43468921 | None:intergenic | 50.0% | |
| GGGGTGAGAATTCCACACAT+TGG | + | chr7_4:43468913-43468932 | None:intergenic | 50.0% | |
| GGTGTGAGAACTAGGTCCAT+AGG | + | chr7_4:43468940-43468959 | None:intergenic | 50.0% | |
| GTTCTCACACCTTTCGTGTG+TGG | - | chr7_4:43468949-43468968 | Msa1155520:intron | 50.0% | |
| TGAGAGTTCCCACACACGAA+AGG | + | chr7_4:43468961-43468980 | None:intergenic | 50.0% | |
| ! | ATCTAAAATGGTGGGGCAGG+TGG | + | chr7_4:43469117-43469136 | None:intergenic | 50.0% |
| GCAGTGTACATCTCTCTTCC+TGG | - | chr7_4:43469717-43469736 | Msa1155520:intron | 50.0% | |
| GCCGGCATATGAATGCACAG+AGG | + | chr7_4:43468522-43468541 | None:intergenic | 55.0% | |
| ! | CCCATTTTCCCTAATCGCCG+AGG | - | chr7_4:43468859-43468878 | Msa1155520:intron | 55.0% |
| CACATTGGAGTGACCATGGC+TGG | + | chr7_4:43468898-43468917 | None:intergenic | 55.0% | |
| GCCATGGTCACTCCAATGTG+TGG | - | chr7_4:43468898-43468917 | Msa1155520:intron | 55.0% | |
| ATGGTCTCATGTTGCGGGCA+CGG | - | chr7_4:43468994-43469013 | Msa1155520:intron | 55.0% | |
| CGGCTTCCATAGCAATGCCA+TGG | - | chr7_4:43469014-43469033 | Msa1155520:intron | 55.0% | |
| GCTCGGACTATCGGGCACAC+AGG | - | chr7_4:43469498-43469517 | Msa1155520:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 43465891 | 43469945 | 43465891 | ID=Msa1155520;Name=Msa1155520 |
| chr7_4 | mRNA | 43465891 | 43469945 | 43465891 | ID=Msa1155520-mRNA-1;Parent=Msa1155520;Name=Msa1155520-mRNA-1;_AED=0.21;_eAED=0.21;_QI=218|1|1|1|0.90|0.83|12|198|247 |
| chr7_4 | exon | 43465891 | 43466144 | 43465891 | ID=Msa1155520-mRNA-1:exon:10994;Parent=Msa1155520-mRNA-1 |
| chr7_4 | exon | 43466317 | 43466368 | 43466317 | ID=Msa1155520-mRNA-1:exon:10993;Parent=Msa1155520-mRNA-1 |
| chr7_4 | exon | 43467375 | 43467464 | 43467375 | ID=Msa1155520-mRNA-1:exon:10992;Parent=Msa1155520-mRNA-1 |
| chr7_4 | exon | 43467555 | 43467650 | 43467555 | ID=Msa1155520-mRNA-1:exon:10991;Parent=Msa1155520-mRNA-1 |
| chr7_4 | exon | 43467756 | 43467855 | 43467756 | ID=Msa1155520-mRNA-1:exon:10990;Parent=Msa1155520-mRNA-1 |
| chr7_4 | exon | 43467930 | 43467985 | 43467930 | ID=Msa1155520-mRNA-1:exon:10989;Parent=Msa1155520-mRNA-1 |
| chr7_4 | exon | 43468232 | 43468267 | 43468232 | ID=Msa1155520-mRNA-1:exon:10988;Parent=Msa1155520-mRNA-1 |
| chr7_4 | exon | 43468405 | 43468481 | 43468405 | ID=Msa1155520-mRNA-1:exon:10987;Parent=Msa1155520-mRNA-1 |
| chr7_4 | exon | 43468701 | 43468767 | 43468701 | ID=Msa1155520-mRNA-1:exon:10986;Parent=Msa1155520-mRNA-1 |
| chr7_4 | exon | 43468913 | 43468957 | 43468913 | ID=Msa1155520-mRNA-1:exon:10985;Parent=Msa1155520-mRNA-1 |
| chr7_4 | exon | 43469405 | 43469503 | 43469405 | ID=Msa1155520-mRNA-1:exon:10984;Parent=Msa1155520-mRNA-1 |
| chr7_4 | exon | 43469758 | 43469945 | 43469758 | ID=Msa1155520-mRNA-1:exon:10983;Parent=Msa1155520-mRNA-1 |
| chr7_4 | five_prime_UTR | 43469758 | 43469945 | 43469758 | ID=Msa1155520-mRNA-1:five_prime_utr;Parent=Msa1155520-mRNA-1 |
| chr7_4 | five_prime_UTR | 43469474 | 43469503 | 43469474 | ID=Msa1155520-mRNA-1:five_prime_utr;Parent=Msa1155520-mRNA-1 |
| chr7_4 | CDS | 43469405 | 43469473 | 43469405 | ID=Msa1155520-mRNA-1:cds;Parent=Msa1155520-mRNA-1 |
| chr7_4 | CDS | 43468913 | 43468957 | 43468913 | ID=Msa1155520-mRNA-1:cds;Parent=Msa1155520-mRNA-1 |
| chr7_4 | CDS | 43468701 | 43468767 | 43468701 | ID=Msa1155520-mRNA-1:cds;Parent=Msa1155520-mRNA-1 |
| chr7_4 | CDS | 43468405 | 43468481 | 43468405 | ID=Msa1155520-mRNA-1:cds;Parent=Msa1155520-mRNA-1 |
| chr7_4 | CDS | 43468232 | 43468267 | 43468232 | ID=Msa1155520-mRNA-1:cds;Parent=Msa1155520-mRNA-1 |
| chr7_4 | CDS | 43467930 | 43467985 | 43467930 | ID=Msa1155520-mRNA-1:cds;Parent=Msa1155520-mRNA-1 |
| chr7_4 | CDS | 43467756 | 43467855 | 43467756 | ID=Msa1155520-mRNA-1:cds;Parent=Msa1155520-mRNA-1 |
| chr7_4 | CDS | 43467555 | 43467650 | 43467555 | ID=Msa1155520-mRNA-1:cds;Parent=Msa1155520-mRNA-1 |
| chr7_4 | CDS | 43467375 | 43467464 | 43467375 | ID=Msa1155520-mRNA-1:cds;Parent=Msa1155520-mRNA-1 |
| chr7_4 | CDS | 43466317 | 43466368 | 43466317 | ID=Msa1155520-mRNA-1:cds;Parent=Msa1155520-mRNA-1 |
| chr7_4 | CDS | 43466089 | 43466144 | 43466089 | ID=Msa1155520-mRNA-1:cds;Parent=Msa1155520-mRNA-1 |
| chr7_4 | three_prime_UTR | 43465891 | 43466088 | 43465891 | ID=Msa1155520-mRNA-1:three_prime_utr;Parent=Msa1155520-mRNA-1 |
| Gene Sequence |
| Protein sequence |
