Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1181830 | XP_039684693.1 | 51.515 | 99 | 39 | 2 | 111 | 201 | 1 | 98 | 3.48e-20 | 92.0 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002750 | Msa1181830 | 0.830526 | 2.794373e-55 | -8.615850e-47 |
| Msa0002790 | Msa1181830 | 0.833165 | 6.238153e-56 | -8.615850e-47 |
| Msa0003780 | Msa1181830 | 0.839476 | 1.549007e-57 | -8.615850e-47 |
| Msa0022970 | Msa1181830 | 0.823278 | 1.509586e-53 | -8.615850e-47 |
| Msa0024710 | Msa1181830 | 0.821929 | 3.108504e-53 | -8.615850e-47 |
| Msa0026210 | Msa1181830 | 0.806648 | 7.427335e-50 | -8.615850e-47 |
| Msa0027260 | Msa1181830 | 0.827132 | 1.852162e-54 | -8.615850e-47 |
| Msa0032090 | Msa1181830 | 0.841138 | 5.698249e-58 | -8.615850e-47 |
| Msa0032430 | Msa1181830 | 0.821975 | 3.034130e-53 | -8.615850e-47 |
| Msa0032580 | Msa1181830 | 0.835016 | 2.144582e-56 | -8.615850e-47 |
| Msa0040690 | Msa1181830 | 0.843641 | 1.236706e-58 | -8.615850e-47 |
| Msa0042280 | Msa1181830 | 0.815662 | 8.241241e-52 | -8.615850e-47 |
| Msa0043660 | Msa1181830 | 0.800198 | 1.612916e-48 | -8.615850e-47 |
| Msa0048180 | Msa1181830 | 0.800954 | 1.130896e-48 | -8.615850e-47 |
| Msa0049370 | Msa1181830 | 0.803578 | 3.261218e-49 | -8.615850e-47 |
| Msa0052610 | Msa1181830 | 0.814976 | 1.171105e-51 | -8.615850e-47 |
| Msa0074320 | Msa1181830 | 0.815121 | 1.087421e-51 | -8.615850e-47 |
| Msa0079380 | Msa1181830 | 0.829499 | 4.974100e-55 | -8.615850e-47 |
| Msa0080200 | Msa1181830 | 0.807073 | 6.039741e-50 | -8.615850e-47 |
| Msa0086750 | Msa1181830 | 0.802772 | 4.788209e-49 | -8.615850e-47 |
| Msa0118710 | Msa1181830 | 0.842546 | 2.420056e-58 | -8.615850e-47 |
| Msa0603320 | Msa1181830 | 0.805353 | 1.390456e-49 | -8.615850e-47 |
| Msa0608320 | Msa1181830 | 0.801788 | 7.632556e-49 | -8.615850e-47 |
| Msa0615440 | Msa1181830 | 0.847754 | 9.464773e-60 | -8.615850e-47 |
| Msa0620990 | Msa1181830 | 0.802886 | 4.534199e-49 | -8.615850e-47 |
| Msa0669520 | Msa1181830 | 0.811913 | 5.519621e-51 | -8.615850e-47 |
| Msa0698490 | Msa1181830 | 0.847288 | 1.271182e-59 | -8.615850e-47 |
| Msa0698660 | Msa1181830 | 0.849576 | 2.960346e-60 | -8.615850e-47 |
| Msa0738100 | Msa1181830 | 0.843312 | 1.513805e-58 | -8.615850e-47 |
| Msa0785130 | Msa1181830 | 0.802697 | 4.960329e-49 | -8.615850e-47 |
| Msa0792760 | Msa1181830 | 0.803600 | 3.226098e-49 | -8.615850e-47 |
| Msa0817540 | Msa1181830 | 0.822097 | 2.842761e-53 | -8.615850e-47 |
| Msa0128860 | Msa1181830 | 0.830737 | 2.481544e-55 | -8.615850e-47 |
| Msa0146340 | Msa1181830 | 0.810841 | 9.432082e-51 | -8.615850e-47 |
| Msa0165660 | Msa1181830 | 0.808734 | 2.677460e-50 | -8.615850e-47 |
| Msa0167480 | Msa1181830 | 0.808438 | 3.097287e-50 | -8.615850e-47 |
| Msa0172070 | Msa1181830 | 0.827631 | 1.406276e-54 | -8.615850e-47 |
| Msa0172970 | Msa1181830 | 0.838321 | 3.082305e-57 | -8.615850e-47 |
| Msa0174730 | Msa1181830 | 0.831067 | 2.059914e-55 | -8.615850e-47 |
| Msa0187690 | Msa1181830 | 0.824541 | 7.634764e-54 | -8.615850e-47 |
| Msa0187930 | Msa1181830 | 0.868418 | 6.627415e-66 | -8.615850e-47 |
| Msa0188350 | Msa1181830 | 0.800817 | 1.206169e-48 | -8.615850e-47 |
| Msa0194540 | Msa1181830 | 0.864927 | 8.549563e-65 | -8.615850e-47 |
| Msa0220720 | Msa1181830 | 0.814038 | 1.887916e-51 | -8.615850e-47 |
| Msa0231660 | Msa1181830 | 0.801581 | 8.416958e-49 | -8.615850e-47 |
| Msa0369050 | Msa1181830 | 0.807371 | 5.222458e-50 | -8.615850e-47 |
| Msa0402650 | Msa1181830 | 0.807108 | 5.938047e-50 | -8.615850e-47 |
| Msa1006840 | Msa1181830 | 0.829578 | 4.760064e-55 | -8.615850e-47 |
| Msa1013400 | Msa1181830 | 0.811338 | 7.360584e-51 | -8.615850e-47 |
| Msa1019240 | Msa1181830 | 0.807439 | 5.051867e-50 | -8.615850e-47 |
| Msa1019260 | Msa1181830 | 0.806932 | 6.470721e-50 | -8.615850e-47 |
| Msa1043690 | Msa1181830 | 0.837136 | 6.210971e-57 | -8.615850e-47 |
| Msa1051880 | Msa1181830 | 0.820229 | 7.659608e-53 | -8.615850e-47 |
| Msa1065390 | Msa1181830 | 0.804178 | 2.446594e-49 | -8.615850e-47 |
| Msa1066490 | Msa1181830 | 0.816889 | 4.381451e-52 | -8.615850e-47 |
| Msa1081150 | Msa1181830 | 0.808551 | 2.929814e-50 | -8.615850e-47 |
| Msa1093530 | Msa1181830 | 0.802294 | 6.007733e-49 | -8.615850e-47 |
| Msa1104140 | Msa1181830 | 0.837279 | 5.707305e-57 | -8.615850e-47 |
| Msa1104210 | Msa1181830 | 0.811935 | 5.457217e-51 | -8.615850e-47 |
| Msa0244780 | Msa1181830 | 0.869708 | 2.529130e-66 | -8.615850e-47 |
| Msa0258850 | Msa1181830 | 0.808639 | 2.805180e-50 | -8.615850e-47 |
| Msa0262310 | Msa1181830 | 0.822657 | 2.106814e-53 | -8.615850e-47 |
| Msa0264010 | Msa1181830 | 0.803233 | 3.844881e-49 | -8.615850e-47 |
| Msa0268130 | Msa1181830 | 0.867386 | 1.421838e-65 | -8.615850e-47 |
| Msa0283390 | Msa1181830 | 0.811862 | 5.660832e-51 | -8.615850e-47 |
| Msa0289580 | Msa1181830 | 0.827793 | 1.285522e-54 | -8.615850e-47 |
| Msa0289610 | Msa1181830 | 0.833264 | 5.892184e-56 | -8.615850e-47 |
| Msa0298200 | Msa1181830 | 0.811712 | 6.102384e-51 | -8.615850e-47 |
| Msa0298990 | Msa1181830 | 0.870015 | 2.007369e-66 | -8.615850e-47 |
| Msa0299870 | Msa1181830 | 0.822150 | 2.763059e-53 | -8.615850e-47 |
| Msa0321640 | Msa1181830 | 0.818401 | 1.998291e-52 | -8.615850e-47 |
| Msa0327300 | Msa1181830 | 0.857712 | 1.354439e-62 | -8.615850e-47 |
| Msa0327330 | Msa1181830 | 0.862360 | 5.354474e-64 | -8.615850e-47 |
| Msa0336010 | Msa1181830 | 0.852722 | 3.831796e-61 | -8.615850e-47 |
| Msa0337240 | Msa1181830 | 0.802937 | 4.426176e-49 | -8.615850e-47 |
| Msa0337650 | Msa1181830 | 0.805201 | 1.496264e-49 | -8.615850e-47 |
| Msa0340380 | Msa1181830 | 0.802187 | 6.317776e-49 | -8.615850e-47 |
| Msa0357900 | Msa1181830 | 0.814376 | 1.589863e-51 | -8.615850e-47 |
| Msa1124110 | Msa1181830 | 0.808665 | 2.770096e-50 | -8.615850e-47 |
| Msa1126510 | Msa1181830 | 0.805878 | 1.079123e-49 | -8.615850e-47 |
| Msa1135890 | Msa1181830 | 0.837274 | 5.724273e-57 | -8.615850e-47 |
| Msa1155520 | Msa1181830 | 0.863793 | 1.932208e-64 | -8.615850e-47 |
| Msa1166860 | Msa1181830 | 0.815499 | 8.959837e-52 | -8.615850e-47 |
| Msa1166870 | Msa1181830 | 0.808639 | 2.805513e-50 | -8.615850e-47 |
| Msa1168950 | Msa1181830 | 0.813726 | 2.211824e-51 | -8.615850e-47 |
| Msa1169040 | Msa1181830 | 0.815781 | 7.754471e-52 | -8.615850e-47 |
| Msa1181830 | Msa1181840 | 0.934873 | 2.052870e-96 | -8.615850e-47 |
| Msa1181830 | Msa1181850 | 0.953558 | 2.106813e-111 | -8.615850e-47 |
| Msa1181830 | Msa1181860 | 0.954172 | 5.372629e-112 | -8.615850e-47 |
| Msa1181830 | Msa1181910 | 0.807637 | 4.586542e-50 | -8.615850e-47 |
| Msa1181830 | Msa1206670 | 0.839708 | 1.348343e-57 | -8.615850e-47 |
| Msa1181830 | Msa1206850 | 0.820116 | 8.131480e-53 | -8.615850e-47 |
| Msa1181830 | Msa1215820 | 0.825711 | 4.038868e-54 | -8.615850e-47 |
| Msa1181830 | Msa1257510 | 0.803789 | 2.947946e-49 | -8.615850e-47 |
| Msa1181830 | Msa1349570 | 0.800204 | 1.608641e-48 | -8.615850e-47 |
| Msa1181830 | Msa1363330 | 0.878994 | 1.789184e-69 | -8.615850e-47 |
| Msa1181830 | Msa1366180 | 0.804335 | 2.270093e-49 | -8.615850e-47 |
| Msa1181830 | Msa1374120 | 0.858477 | 8.018581e-63 | -8.615850e-47 |
| Msa1181830 | Msa1379760 | 0.836019 | 1.195963e-56 | -8.615850e-47 |
| Msa1181830 | Msa1382620 | 0.822621 | 2.148240e-53 | -8.615850e-47 |
| Msa1181830 | Msa1386600 | 0.879275 | 1.423539e-69 | -8.615850e-47 |
| Msa1181830 | Msa1392200 | 0.803875 | 2.829301e-49 | -8.615850e-47 |
| Msa1181830 | Msa1399530 | 0.807231 | 5.591193e-50 | -8.615850e-47 |
| Msa1181830 | Msa1432700 | 0.808791 | 2.603342e-50 | -8.615850e-47 |
| Msa1181830 | Msa1448690 | 0.868752 | 5.169896e-66 | -8.615850e-47 |
| Msa1181830 | Msa1465260 | 0.810787 | 9.690053e-51 | -8.615850e-47 |
| Msa0483110 | Msa1181830 | 0.811991 | 5.307593e-51 | -8.615850e-47 |
| Msa0508590 | Msa1181830 | 0.808851 | 2.527750e-50 | -8.615850e-47 |
| Msa0510940 | Msa1181830 | 0.813899 | 2.026641e-51 | -8.615850e-47 |
| Msa0526540 | Msa1181830 | 0.877568 | 5.660724e-69 | -8.615850e-47 |
| Msa0527150 | Msa1181830 | 0.803096 | 4.102633e-49 | -8.615850e-47 |
| Msa0532990 | Msa1181830 | 0.803010 | 4.275603e-49 | -8.615850e-47 |
| Msa0571920 | Msa1181830 | 0.825342 | 4.938489e-54 | -8.615850e-47 |
| Msa0576940 | Msa1181830 | 0.878032 | 3.898930e-69 | -8.615850e-47 |
| Msa0902760 | Msa1181830 | 0.806017 | 1.009113e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 53 sgRNAs with CRISPR-Local
Find 307 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATAAGGTTCTTGCTGCTTT+TGG | 0.192758 | 8_1:+16443623 | Msa1181830:CDS |
| CATTGGCTACCTATACTTTC+TGG | 0.232813 | 8_1:-16443990 | None:intergenic |
| CGCCCCTTTATTCAGTCTTC+AGG | 0.265091 | 8_1:+16439441 | Msa1181830:CDS |
| ACCTCTTGCACTTTCATTCC+AGG | 0.289058 | 8_1:-16443900 | None:intergenic |
| TTAGGCTTTGTTTGGATTGA+TGG | 0.303770 | 8_1:+16444098 | Msa1181830:three_prime_UTR |
| TGGTTACATGACCTTGCTTT+TGG | 0.337295 | 8_1:+16440211 | Msa1181830:CDS |
| CATACCTGAAGACTGAATAA+AGG | 0.387037 | 8_1:-16439445 | None:intergenic |
| TCATCTGTTGTCGCCGTTCG+TGG | 0.388201 | 8_1:+16440191 | Msa1181830:CDS |
| GATTCTCTTCTTGCTGCACC+TGG | 0.403105 | 8_1:+16443882 | Msa1181830:CDS |
| ATACCTGAAGACTGAATAAA+GGG | 0.435754 | 8_1:-16439444 | None:intergenic |
| CAGCTCGGGTATCTGTCATT+TGG | 0.447709 | 8_1:-16444041 | None:intergenic |
| TTAATCATGATGAGTCTTTG+AGG | 0.448488 | 8_1:+16444071 | Msa1181830:three_prime_UTR |
| ATTCAGTCTGATCATTCTCC+TGG | 0.449671 | 8_1:+16442974 | Msa1181830:CDS |
| ATGAAAGTGCAAGAGGTTAC+CGG | 0.464202 | 8_1:+16443906 | Msa1181830:CDS |
| GCCTGTCATTTGGACATCTC+CGG | 0.479191 | 8_1:-16443925 | None:intergenic |
| AAATTCGACTTATTTAGATA+AGG | 0.502450 | 8_1:+16443607 | Msa1181830:CDS |
| TGATTAAGCATCACCAGCTC+GGG | 0.504102 | 8_1:-16444055 | None:intergenic |
| TCAATTACACAACCCTGAAA+AGG | 0.506542 | 8_1:+16439947 | Msa1181830:CDS |
| ATGATTAAGCATCACCAGCT+CGG | 0.514349 | 8_1:-16444056 | None:intergenic |
| AACCCTGAAAAGGCGTTATG+AGG | 0.515253 | 8_1:+16439957 | Msa1181830:CDS |
| AAGGCGTTATGAGGAGGAGG+AGG | 0.522213 | 8_1:+16439966 | Msa1181830:CDS |
| ACCGGAGATGTCCAAATGAC+AGG | 0.524344 | 8_1:+16443924 | Msa1181830:CDS |
| TGTCGGTGGAGATCCGCCTT+CGG | 0.527261 | 8_1:+16442650 | Msa1181830:CDS |
| GTTAATGTGCAAGAGGTTGT+CGG | 0.545673 | 8_1:+16444012 | Msa1181830:exon |
| AGATGAGGATGCCACAGAGC+AGG | 0.550118 | 8_1:+16439900 | Msa1181830:CDS |
| CAGACGGAGTAGATGCGGTA+TGG | 0.550164 | 8_1:-16442629 | None:intergenic |
| AGGCCGCGACCAGAAAGTAT+AGG | 0.551913 | 8_1:+16443981 | Msa1181830:CDS |
| GGATGAAAGTGAGAGTGTGA+TGG | 0.557213 | 8_1:-16442608 | None:intergenic |
| AACCTCTTGCACATTAACAT+TGG | 0.559132 | 8_1:-16444007 | None:intergenic |
| CTACCTATACTTTCTGGTCG+CGG | 0.569121 | 8_1:-16443984 | None:intergenic |
| ATTGATGGAATATGATGTAA+TGG | 0.571482 | 8_1:+16444113 | Msa1181830:three_prime_UTR |
| GAAAAGGCGTTATGAGGAGG+AGG | 0.574952 | 8_1:+16439963 | Msa1181830:CDS |
| GATGAAAGTGAGAGTGTGAT+GGG | 0.585322 | 8_1:-16442607 | None:intergenic |
| AATATATATTACCAAAAGCA+AGG | 0.592917 | 8_1:-16440222 | None:intergenic |
| GGCGGATCTCCACCGACAGA+CGG | 0.593030 | 8_1:-16442645 | None:intergenic |
| GCAGATAGTGTTTAGCGTTG+CGG | 0.594950 | 8_1:+16442566 | Msa1181830:intron |
| AACTTACATAAAGCCGAAGG+CGG | 0.606746 | 8_1:-16442663 | None:intergenic |
| AGCCAATGTTAATGTGCAAG+AGG | 0.609445 | 8_1:+16444005 | Msa1181830:exon |
| CAAGGTCATGTAACCACGAA+CGG | 0.622731 | 8_1:-16440204 | None:intergenic |
| GAGCAGGTGTTAAAACATTG+TGG | 0.626257 | 8_1:+16439916 | Msa1181830:CDS |
| ACCTGGAATGAAAGTGCAAG+AGG | 0.627490 | 8_1:+16443899 | Msa1181830:CDS |
| CCTGAAAAGGCGTTATGAGG+AGG | 0.628721 | 8_1:+16439960 | Msa1181830:CDS |
| CAAATGACAGATACCCGAGC+TGG | 0.631899 | 8_1:+16444042 | Msa1181830:three_prime_UTR |
| GCATCTACTCCGTCTGTCGG+TGG | 0.633547 | 8_1:+16442636 | Msa1181830:CDS |
| TGGAGTTTAACTTACCGACA+TGG | 0.637122 | 8_1:-16442813 | None:intergenic |
| GGCGACAACAGATGAGTCGA+AGG | 0.643879 | 8_1:-16440183 | None:intergenic |
| ACCGCATCTACTCCGTCTGT+CGG | 0.655275 | 8_1:+16442633 | Msa1181830:CDS |
| ACCGACAGACGGAGTAGATG+CGG | 0.659716 | 8_1:-16442634 | None:intergenic |
| TAGGTGACACTATCAAGCGT+AGG | 0.671172 | 8_1:-16444285 | None:intergenic |
| GTTCTTGATGAAGATGAACA+AGG | 0.684506 | 8_1:+16443662 | Msa1181830:CDS |
| GAGAACTTACATAAAGCCGA+AGG | 0.693598 | 8_1:-16442666 | None:intergenic |
| TTATAAGGAAGACTCCATGT+CGG | 0.734707 | 8_1:+16442799 | Msa1181830:CDS |
| TACCTGAAGACTGAATAAAG+GGG | 0.755082 | 8_1:-16439443 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTTAGTATGATTTTAT+GGG | - | chr8_1:16439803-16439822 | None:intergenic | 10.0% |
| !!! | TATTTTTTAGTATGATTTTA+TGG | - | chr8_1:16439804-16439823 | None:intergenic | 10.0% |
| !!! | ATTGAAGAATTTTAATTTAT+AGG | + | chr8_1:16440717-16440736 | Msa1181830:intron | 10.0% |
| !!! | CGAAATTTTATAATTATTTA+AGG | - | chr8_1:16440762-16440781 | None:intergenic | 10.0% |
| !! | ATAATTATAAAATTTCGATT+TGG | + | chr8_1:16440765-16440784 | Msa1181830:intron | 10.0% |
| !!! | AATATTTTGATTATTATTTC+CGG | - | chr8_1:16441034-16441053 | None:intergenic | 10.0% |
| !! | AATAAATGAAAATGATTAAT+TGG | + | chr8_1:16441916-16441935 | Msa1181830:intron | 10.0% |
| !!! | ATGAAATATATTAATTTTTC+TGG | + | chr8_1:16442102-16442121 | Msa1181830:intron | 10.0% |
| !!! | TGAAATATATTAATTTTTCT+GGG | + | chr8_1:16442103-16442122 | Msa1181830:intron | 10.0% |
| !! | GAAATTTCATAATTATTTAA+GGG | + | chr8_1:16442291-16442310 | Msa1181830:intron | 10.0% |
| !! | ATATATATATATATCTATGT+AGG | + | chr8_1:16442434-16442453 | Msa1181830:intron | 10.0% |
| !! | TATATATATATATCTATGTA+GGG | + | chr8_1:16442435-16442454 | Msa1181830:intron | 10.0% |
| !! | AAAATAATTATTGTCTTAAA+TGG | + | chr8_1:16443580-16443599 | Msa1181830:intron | 10.0% |
| !!! | AAAATGAGTTTTTATTGTTA+GGG | - | chr8_1:16440390-16440409 | None:intergenic | 15.0% |
| !!! | CGTTTTTAATTAAAATCTAA+CGG | - | chr8_1:16442195-16442214 | None:intergenic | 15.0% |
| !! | TTTAAATTTGAGAGAAATTT+AGG | - | chr8_1:16441114-16441133 | None:intergenic | 15.0% |
| !!! | TAATTTGTATGAATTAATCA+TGG | - | chr8_1:16441731-16441750 | None:intergenic | 15.0% |
| !!! | CGTTTTTAATTAAAATCTAA+CGG | + | chr8_1:16442195-16442214 | Msa1181830:intron | 15.0% |
| !! | ATAATTATGAAATTTCGATT+TGG | - | chr8_1:16442287-16442306 | None:intergenic | 15.0% |
| !! | CGAAATTTCATAATTATTTA+AGG | + | chr8_1:16442290-16442309 | Msa1181830:intron | 15.0% |
| !! | ATATATATATATCTATGTAG+GGG | + | chr8_1:16442436-16442455 | Msa1181830:intron | 15.0% |
| !! | TTTAATATGAGTTAAGTTAA+TGG | - | chr8_1:16443243-16443262 | None:intergenic | 15.0% |
| !!! | AAAATAAATACATTCACTTT+TGG | - | chr8_1:16443275-16443294 | None:intergenic | 15.0% |
| !! | AATATATATTACCAAAAGCA+AGG | - | chr8_1:16440225-16440244 | None:intergenic | 20.0% |
| !! | TTAACTGAAAAAAATAGGAA+AGG | - | chr8_1:16440276-16440295 | None:intergenic | 20.0% |
| !! | GTGAATTAACTGAAAAAAAT+AGG | - | chr8_1:16440281-16440300 | None:intergenic | 20.0% |
| !!! | GAAAATGAGTTTTTATTGTT+AGG | - | chr8_1:16440391-16440410 | None:intergenic | 20.0% |
| !! | TAAAACAAAAAAATTCGACT+CGG | + | chr8_1:16440468-16440487 | Msa1181830:intron | 20.0% |
| !! | TATAGGCTTAATTATACAAT+TGG | + | chr8_1:16440734-16440753 | Msa1181830:intron | 20.0% |
| !!! | TTTGAGACTTTTATTAATTG+GGG | - | chr8_1:16442259-16442278 | None:intergenic | 20.0% |
| !!! | GTTTGAGACTTTTATTAATT+GGG | - | chr8_1:16442258-16442277 | None:intergenic | 20.0% |
| !!! | AGTTTGAGACTTTTATTAAT+TGG | - | chr8_1:16442257-16442276 | None:intergenic | 20.0% |
| !! | TTAATTAAAATCTAACGGAA+TGG | - | chr8_1:16442200-16442219 | None:intergenic | 20.0% |
| !!! | TTTTTTTGAGTTTTTGAGTT+TGG | - | chr8_1:16440944-16440963 | None:intergenic | 20.0% |
| !! | AGAAGAAATTATTGTCTTAT+GGG | - | chr8_1:16441189-16441208 | None:intergenic | 20.0% |
| !!! | TCATTTTCATTTATTCTCAT+GGG | - | chr8_1:16441911-16441930 | None:intergenic | 20.0% |
| !!! | ATCATTTTCATTTATTCTCA+TGG | - | chr8_1:16441912-16441931 | None:intergenic | 20.0% |
| !!! | TTGGTAATTAATTGAATAGT+TGG | + | chr8_1:16441935-16441954 | Msa1181830:intron | 20.0% |
| !! | TAAAGAAATCAACAGAAAAT+TGG | - | chr8_1:16442025-16442044 | None:intergenic | 20.0% |
| !!! | TATATTAATTTTTCTGGGTT+TGG | + | chr8_1:16442108-16442127 | Msa1181830:intron | 20.0% |
| !! | TTAATTAAAATCTAACGGAA+TGG | + | chr8_1:16442200-16442219 | Msa1181830:intron | 20.0% |
| !! | AATTAATAAAAGTCTCAAAC+TGG | - | chr8_1:16440794-16440813 | None:intergenic | 20.0% |
| !!! | AGTTTGAGACTTTTATTAAT+TGG | + | chr8_1:16442257-16442276 | Msa1181830:intron | 20.0% |
| !!! | GTTTGAGACTTTTATTAATT+GGG | + | chr8_1:16442258-16442277 | Msa1181830:intron | 20.0% |
| !!! | TTTGAGACTTTTATTAATTG+GGG | + | chr8_1:16442259-16442278 | Msa1181830:intron | 20.0% |
| !! | ATTAGGCTTAATTATACATT+TGG | - | chr8_1:16442318-16442337 | None:intergenic | 20.0% |
| !! | TTAAGCCTAATTTATATAAG+AGG | + | chr8_1:16442327-16442346 | Msa1181830:intron | 20.0% |
| !! | TAAGCCTAATTTATATAAGA+GGG | + | chr8_1:16442328-16442347 | Msa1181830:intron | 20.0% |
| !! | TATACCCTCTTATATAAATT+AGG | - | chr8_1:16442335-16442354 | None:intergenic | 20.0% |
| !! | TTAACTCATATTAAAACGAA+GGG | + | chr8_1:16443248-16443267 | Msa1181830:intron | 20.0% |
| !!! | ACTGATTAGGATTTTTATTT+AGG | + | chr8_1:16443501-16443520 | Msa1181830:intron | 20.0% |
| !!! | ACAATAATTATTTTCTCACA+TGG | - | chr8_1:16443574-16443593 | None:intergenic | 20.0% |
| !! | AAATTCGACTTATTTAGATA+AGG | + | chr8_1:16443607-16443626 | Msa1181830:CDS | 20.0% |
| !! | ATCATCATAAAGTGAAAAAA+AGG | - | chr8_1:16444152-16444171 | None:intergenic | 20.0% |
| ! | AATACTGAAGAAAAGAGAAA+CGG | - | chr8_1:16439736-16439755 | None:intergenic | 25.0% |
| !! | TAATTCACTCATGAGTATTT+TGG | + | chr8_1:16440293-16440312 | Msa1181830:intron | 25.0% |
| !! | AATTCACTCATGAGTATTTT+GGG | + | chr8_1:16440294-16440313 | Msa1181830:intron | 25.0% |
| !! | TAAACTGCATCACTAATTTT+GGG | - | chr8_1:16440436-16440455 | None:intergenic | 25.0% |
| !! | ATAAACTGCATCACTAATTT+TGG | - | chr8_1:16440437-16440456 | None:intergenic | 25.0% |
| ! | TCAAATTGCAATCAAAGTTT+GGG | - | chr8_1:16440536-16440555 | None:intergenic | 25.0% |
| ! | TTCAAATTGCAATCAAAGTT+TGG | - | chr8_1:16440537-16440556 | None:intergenic | 25.0% |
| ! | TTAATTCATCTTGAACTTTC+TGG | - | chr8_1:16440693-16440712 | None:intergenic | 25.0% |
| !! | TTGAGACTTTTATTAATTGG+GGG | - | chr8_1:16442260-16442279 | None:intergenic | 25.0% |
| !!! | GAATTTTGAAAGATGGATAT+TGG | - | chr8_1:16441070-16441089 | None:intergenic | 25.0% |
| ! | TAGGTTTAATGAATGAAAGA+AGG | - | chr8_1:16441095-16441114 | None:intergenic | 25.0% |
| ! | AATTTGTGAGAAGATGAATT+GGG | - | chr8_1:16441137-16441156 | None:intergenic | 25.0% |
| !!! | TGAGAAAAGGATTTTGTTAT+AGG | - | chr8_1:16441164-16441183 | None:intergenic | 25.0% |
| ! | GAGAAGAAATTATTGTCTTA+TGG | - | chr8_1:16441190-16441209 | None:intergenic | 25.0% |
| ! | AATGAACATTAACGCAAATT+GGG | - | chr8_1:16441623-16441642 | None:intergenic | 25.0% |
| ! | CTCTTATATGAAATGAAGAA+AGG | - | chr8_1:16441678-16441697 | None:intergenic | 25.0% |
| ! | TTCTTCATTTCATATAAGAG+AGG | + | chr8_1:16441678-16441697 | Msa1181830:intron | 25.0% |
| ! | AACAGAAAATTGGAAAGAAA+AGG | - | chr8_1:16442015-16442034 | None:intergenic | 25.0% |
| !! | TATGAAGATGATGAATTTTC+TGG | + | chr8_1:16442131-16442150 | Msa1181830:intron | 25.0% |
| !! | ATGAAGATGATGAATTTTCT+GGG | + | chr8_1:16442132-16442151 | Msa1181830:intron | 25.0% |
| !! | TTGAGACTTTTATTAATTGG+GGG | + | chr8_1:16442260-16442279 | Msa1181830:intron | 25.0% |
| ! | TTTCCGAAAATAAGTGTTAT+TGG | + | chr8_1:16442493-16442512 | Msa1181830:intron | 25.0% |
| !! | TTCCGAAAATAAGTGTTATT+GGG | + | chr8_1:16442494-16442513 | Msa1181830:intron | 25.0% |
| ! | TGAAAGATAAGAGATTGTTA+AGG | - | chr8_1:16442743-16442762 | None:intergenic | 25.0% |
| !!! | TCCTTTTCAATTTCAAGTTT+AGG | + | chr8_1:16443053-16443072 | Msa1181830:intron | 25.0% |
| !!! | CCTTTTCAATTTCAAGTTTA+GGG | + | chr8_1:16443054-16443073 | Msa1181830:intron | 25.0% |
| !! | ATTAAGCTTTTTATCCAATC+AGG | + | chr8_1:16443166-16443185 | Msa1181830:intron | 25.0% |
| !! | TTAAGCTTTTTATCCAATCA+GGG | + | chr8_1:16443167-16443186 | Msa1181830:intron | 25.0% |
| ! | AATATGAGTTAAGTTAATGG+AGG | - | chr8_1:16443240-16443259 | None:intergenic | 25.0% |
| ! | CTTAACTCATATTAAAACGA+AGG | + | chr8_1:16443247-16443266 | Msa1181830:intron | 25.0% |
| ! | ATAATCTCTGTTGTTAATAG+CGG | + | chr8_1:16443302-16443321 | Msa1181830:intron | 25.0% |
| ! | ATCATTTGCAAAACAAAGAA+AGG | - | chr8_1:16443462-16443481 | None:intergenic | 25.0% |
| !! | CATTTTTCATACAACTGATT+AGG | + | chr8_1:16443488-16443507 | Msa1181830:intron | 25.0% |
| ! | TTTCTAACATTATGATTGAG+AGG | + | chr8_1:16443540-16443559 | Msa1181830:intron | 25.0% |
| ! | TAATTATTGTCTTAAATGGC+AGG | + | chr8_1:16443584-16443603 | Msa1181830:intron | 25.0% |
| !!! | TTTTGGAATTAATGTGGTAA+AGG | + | chr8_1:16443640-16443659 | Msa1181830:CDS | 25.0% |
| !! | ACAATCTTTTACCAAGAAAA+AGG | + | chr8_1:16443961-16443980 | Msa1181830:CDS | 25.0% |
| ! | ATTGATGGAATATGATGTAA+TGG | + | chr8_1:16444113-16444132 | Msa1181830:three_prime_UTR | 25.0% |
| !!! | CTACATGTTGTGTTTTTAAA+AGG | + | chr8_1:16444251-16444270 | Msa1181830:three_prime_UTR | 25.0% |
| ATACCTGAAGACTGAATAAA+GGG | - | chr8_1:16439447-16439466 | None:intergenic | 30.0% | |
| GAACTAACTTCAGCTTAAAT+AGG | + | chr8_1:16439512-16439531 | Msa1181830:intron | 30.0% | |
| !! | GAGTAGAGTAAATTTTGAGT+AGG | - | chr8_1:16439675-16439694 | None:intergenic | 30.0% |
| ACAAAATCGTTAATCTGTTG+TGG | + | chr8_1:16440072-16440091 | Msa1181830:intron | 30.0% | |
| ATTCATAGTGTTTAGCATTG+CGG | + | chr8_1:16440361-16440380 | Msa1181830:intron | 30.0% | |
| !!! | TGTAGTTTTGTTTCAAGTTC+TGG | - | chr8_1:16440413-16440432 | None:intergenic | 30.0% |
| ! | ACGAAGATGATGAATTTTCT+GGG | - | chr8_1:16440920-16440939 | None:intergenic | 30.0% |
| ! | TACGAAGATGATGAATTTTC+TGG | - | chr8_1:16440921-16440940 | None:intergenic | 30.0% |
| AAATTCATCCTTCTTTCATC+CGG | + | chr8_1:16441012-16441031 | Msa1181830:intron | 30.0% | |
| TATTATTTCCGGATGAAAGA+AGG | - | chr8_1:16441023-16441042 | None:intergenic | 30.0% | |
| !! | GAAGGATGAATTTTGAAAGA+TGG | - | chr8_1:16441077-16441096 | None:intergenic | 30.0% |
| GAATTTGTGAGAAGATGAAT+TGG | - | chr8_1:16441138-16441157 | None:intergenic | 30.0% | |
| ACTACTATTGTTCTGTTATC+TGG | - | chr8_1:16441399-16441418 | None:intergenic | 30.0% | |
| !! | GACAAATGTTGGTTCTAAAT+AGG | - | chr8_1:16441461-16441480 | None:intergenic | 30.0% |
| ! | TTTAGAACCAACATTTGTCT+TGG | + | chr8_1:16441462-16441481 | Msa1181830:intron | 30.0% |
| TGTAATAGCAAAACAGAGAA+GGG | - | chr8_1:16441518-16441537 | None:intergenic | 30.0% | |
| ATGTAATAGCAAAACAGAGA+AGG | - | chr8_1:16441519-16441538 | None:intergenic | 30.0% | |
| CAATGAACATTAACGCAAAT+TGG | - | chr8_1:16441624-16441643 | None:intergenic | 30.0% | |
| TTCATTTCATATAAGAGAGG+TGG | + | chr8_1:16441681-16441700 | Msa1181830:intron | 30.0% | |
| TCATTTCATATAAGAGAGGT+GGG | + | chr8_1:16441682-16441701 | Msa1181830:intron | 30.0% | |
| TTCATTTATTCTCATGGGTT+TGG | - | chr8_1:16441906-16441925 | None:intergenic | 30.0% | |
| TTTGAGGATGAATTTGATGA+AGG | + | chr8_1:16442155-16442174 | Msa1181830:intron | 30.0% | |
| ! | GTGAAGGTATATATATGTAG+TGG | + | chr8_1:16442458-16442477 | Msa1181830:intron | 30.0% |
| GTATATATATGTAGTGGTGT+GGG | + | chr8_1:16442464-16442483 | Msa1181830:intron | 30.0% | |
| !! | AGCCCAATAACACTTATTTT+CGG | - | chr8_1:16442499-16442518 | None:intergenic | 30.0% |
| !!! | GTGATGGGTTTTTATTGTTA+GGG | - | chr8_1:16442595-16442614 | None:intergenic | 30.0% |
| !!! | TGTGATGGGTTTTTATTGTT+AGG | - | chr8_1:16442596-16442615 | None:intergenic | 30.0% |
| ! | CTTTTCGTGTGTAGATTATA+AGG | + | chr8_1:16442784-16442803 | Msa1181830:intron | 30.0% |
| ACTCAATTCAAACAACAACA+TGG | - | chr8_1:16442836-16442855 | None:intergenic | 30.0% | |
| AAGAAATTCTGAATCAAACC+AGG | - | chr8_1:16442995-16443014 | None:intergenic | 30.0% | |
| CCCTAAACTTGAAATTGAAA+AGG | - | chr8_1:16443057-16443076 | None:intergenic | 30.0% | |
| AAATAAAGACTAACCCTGAT+TGG | - | chr8_1:16443183-16443202 | None:intergenic | 30.0% | |
| ! | CATTTGAAAAAGAGAGCTTT+TGG | - | chr8_1:16443705-16443724 | None:intergenic | 30.0% |
| TTAATCATGATGAGTCTTTG+AGG | + | chr8_1:16444071-16444090 | Msa1181830:three_prime_UTR | 30.0% | |
| TACCTGAAGACTGAATAAAG+GGG | - | chr8_1:16439446-16439465 | None:intergenic | 35.0% | |
| CATACCTGAAGACTGAATAA+AGG | - | chr8_1:16439448-16439467 | None:intergenic | 35.0% | |
| GAAACAACGATTACGAATTC+TGG | - | chr8_1:16439490-16439509 | None:intergenic | 35.0% | |
| ! | GAATTCGTAATCGTTGTTTC+AGG | + | chr8_1:16439490-16439509 | Msa1181830:intron | 35.0% |
| !! | TTTTGAGTAGGTTTTGCCAA+AGG | - | chr8_1:16439663-16439682 | None:intergenic | 35.0% |
| AATGAGTTATCTCATGAGTG+TGG | + | chr8_1:16439844-16439863 | Msa1181830:intron | 35.0% | |
| ! | TGAGCTATGTTTTACAGATG+AGG | + | chr8_1:16439885-16439904 | Msa1181830:CDS | 35.0% |
| TCAATTACACAACCCTGAAA+AGG | + | chr8_1:16439947-16439966 | Msa1181830:CDS | 35.0% | |
| TAAGAGAAAGCTGCTCATAT+AGG | - | chr8_1:16440163-16440182 | None:intergenic | 35.0% | |
| !! | CATGAGTATTTTGGGAACTT+TGG | + | chr8_1:16440302-16440321 | Msa1181830:intron | 35.0% |
| !! | AGTATTTTGGGAACTTTGGT+TGG | + | chr8_1:16440306-16440325 | Msa1181830:intron | 35.0% |
| !! | GTATTTTGGGAACTTTGGTT+GGG | + | chr8_1:16440307-16440326 | Msa1181830:intron | 35.0% |
| GTGATGCAGTTTATCAAGAA+CGG | + | chr8_1:16440443-16440462 | Msa1181830:intron | 35.0% | |
| ! | TTACTGGAATCGTTGATTGA+TGG | - | chr8_1:16440561-16440580 | None:intergenic | 35.0% |
| AATCAACGATTCCAGTAAAG+AGG | + | chr8_1:16440563-16440582 | Msa1181830:intron | 35.0% | |
| ATCAACGATTCCAGTAAAGA+GGG | + | chr8_1:16440564-16440583 | Msa1181830:intron | 35.0% | |
| ATTCATATCAGAATCGTCAC+CGG | - | chr8_1:16440636-16440655 | None:intergenic | 35.0% | |
| ! | TCTAACGGAATGGATTTAAG+TGG | - | chr8_1:16442210-16442229 | None:intergenic | 35.0% |
| !! | TTTGAGGATGAAGTTGATGA+AGG | - | chr8_1:16440897-16440916 | None:intergenic | 35.0% |
| ! | TGATGAATTTTCTGGGTTTG+AGG | - | chr8_1:16442139-16442158 | None:intergenic | 35.0% |
| TGTCTTATGGGTTTGAGAAA+AGG | - | chr8_1:16441177-16441196 | None:intergenic | 35.0% | |
| TGCGAATTCAGACTTAGTTT+GGG | - | chr8_1:16441219-16441238 | None:intergenic | 35.0% | |
| CAGAATACAGGTAATCATGT+TGG | - | chr8_1:16441367-16441386 | None:intergenic | 35.0% | |
| !!! | TGGTTTTGTTTGCAGAATAC+AGG | - | chr8_1:16441379-16441398 | None:intergenic | 35.0% |
| ! | TGCTTTTCCAAGACAAATGT+TGG | - | chr8_1:16441472-16441491 | None:intergenic | 35.0% |
| ! | CATTAACGCAAATTGGGTTT+TGG | - | chr8_1:16441617-16441636 | None:intergenic | 35.0% |
| AACCTAGATGAACTCAAATC+CGG | + | chr8_1:16441645-16441664 | Msa1181830:intron | 35.0% | |
| ! | TGATGAATTTTCTGGGTTTG+AGG | + | chr8_1:16442139-16442158 | Msa1181830:intron | 35.0% |
| ! | TCTAACGGAATGGATTTAAG+TGG | + | chr8_1:16442210-16442229 | Msa1181830:intron | 35.0% |
| ATATATCTATGTAGGGGTGA+AGG | + | chr8_1:16442442-16442461 | Msa1181830:intron | 35.0% | |
| GGTATATATATGTAGTGGTG+TGG | + | chr8_1:16442463-16442482 | Msa1181830:intron | 35.0% | |
| TTATAAGGAAGACTCCATGT+CGG | + | chr8_1:16442799-16442818 | Msa1181830:CDS | 35.0% | |
| ! | TTTTCAGTCTTGGATGATCA+GGG | + | chr8_1:16442938-16442957 | Msa1181830:CDS | 35.0% |
| !! | TTTCAAGTTTAGGGTCTGTT+TGG | + | chr8_1:16443063-16443082 | Msa1181830:intron | 35.0% |
| !!! | TGCTGCTTTTGGAATTAATG+TGG | + | chr8_1:16443634-16443653 | Msa1181830:CDS | 35.0% |
| GTTCTTGATGAAGATGAACA+AGG | + | chr8_1:16443662-16443681 | Msa1181830:CDS | 35.0% | |
| ! | TTGAAAAAGAGAGCTTTTGG+TGG | - | chr8_1:16443702-16443721 | None:intergenic | 35.0% |
| TTGTTGTGTCTGAACTTTGT+AGG | + | chr8_1:16443843-16443862 | Msa1181830:intron | 35.0% | |
| CAAAAAACTTGCCTGTCATT+TGG | - | chr8_1:16443938-16443957 | None:intergenic | 35.0% | |
| AACCTCTTGCACATTAACAT+TGG | - | chr8_1:16444010-16444029 | None:intergenic | 35.0% | |
| !! | ATGAGTCTTTGAGGAGTTTT+AGG | + | chr8_1:16444080-16444099 | Msa1181830:three_prime_UTR | 35.0% |
| !! | TTAGGCTTTGTTTGGATTGA+TGG | + | chr8_1:16444098-16444117 | Msa1181830:three_prime_UTR | 35.0% |
| CTGAAAATCGTGTCACGATT+GGG | - | chr8_1:16439550-16439569 | None:intergenic | 40.0% | |
| ACTGAAAATCGTGTCACGAT+TGG | - | chr8_1:16439551-16439570 | None:intergenic | 40.0% | |
| ! | TTTCCAATCGTGTCACGTTT+TGG | + | chr8_1:16439621-16439640 | Msa1181830:intron | 40.0% |
| !!! | ATGTTTTAACACCTGCTCTG+TGG | - | chr8_1:16439914-16439933 | None:intergenic | 40.0% |
| GAGCAGGTGTTAAAACATTG+TGG | + | chr8_1:16439916-16439935 | Msa1181830:CDS | 40.0% | |
| TTATTAGAACGCCTGCGTTA+AGG | + | chr8_1:16440001-16440020 | Msa1181830:intron | 40.0% | |
| CAACAAAAATGCCTTAACGC+AGG | - | chr8_1:16440015-16440034 | None:intergenic | 40.0% | |
| ! | GCATTTTTGTTGCTCATGCT+TGG | + | chr8_1:16440023-16440042 | Msa1181830:intron | 40.0% |
| GTTGTTCTTCCCAGCAAAAA+GGG | - | chr8_1:16440054-16440073 | None:intergenic | 40.0% | |
| TGTTGTTCTTCCCAGCAAAA+AGG | - | chr8_1:16440055-16440074 | None:intergenic | 40.0% | |
| ! | TGGTTACATGACCTTGCTTT+TGG | + | chr8_1:16440211-16440230 | Msa1181830:CDS | 40.0% |
| ! | GGGAGTGAGCAATTTTTGTT+AGG | + | chr8_1:16440327-16440346 | Msa1181830:intron | 40.0% |
| TGTTAAGCCGATGTAGATTG+CGG | + | chr8_1:16440493-16440512 | Msa1181830:intron | 40.0% | |
| !! | GCAATCAAAGTTTGGGTTGA+AGG | - | chr8_1:16440529-16440548 | None:intergenic | 40.0% |
| AAACCATCAATCAACGACTC+CGG | + | chr8_1:16440614-16440633 | Msa1181830:intron | 40.0% | |
| ! | GAATGGATTTAAGTGGCAGA+CGG | - | chr8_1:16442217-16442236 | None:intergenic | 40.0% |
| GTGCGAATTCAGACTTAGTT+TGG | - | chr8_1:16441220-16441239 | None:intergenic | 40.0% | |
| GAATTCGCACAAGAATTCCA+TGG | + | chr8_1:16441230-16441249 | Msa1181830:intron | 40.0% | |
| !! | TCATGTTGGTTTCTCTGTGA+TGG | - | chr8_1:16441353-16441372 | None:intergenic | 40.0% |
| AAACCCCAAGTCACAATCAA+AGG | + | chr8_1:16441425-16441444 | Msa1181830:intron | 40.0% | |
| AAGCCTTTGATTGTGACTTG+GGG | - | chr8_1:16441431-16441450 | None:intergenic | 40.0% | |
| GAAGCCTTTGATTGTGACTT+GGG | - | chr8_1:16441432-16441451 | None:intergenic | 40.0% | |
| AGAAGCCTTTGATTGTGACT+TGG | - | chr8_1:16441433-16441452 | None:intergenic | 40.0% | |
| AATGAAGAAAGGACTAACGC+CGG | - | chr8_1:16441667-16441686 | None:intergenic | 40.0% | |
| TGGAACCAAACAAGATCCAT+TGG | - | chr8_1:16441886-16441905 | None:intergenic | 40.0% | |
| GAGGATGAATTTGATGAAGG+AGG | + | chr8_1:16442158-16442177 | Msa1181830:intron | 40.0% | |
| GGCAGACAGATGTAATTTAG+AGG | + | chr8_1:16442231-16442250 | Msa1181830:intron | 40.0% | |
| ! | ATCCATACCCATTTTGTCCT+TGG | + | chr8_1:16442538-16442557 | Msa1181830:intron | 40.0% |
| ACGCTAAACACTATCTGCAT+GGG | - | chr8_1:16442564-16442583 | None:intergenic | 40.0% | |
| AACGCTAAACACTATCTGCA+TGG | - | chr8_1:16442565-16442584 | None:intergenic | 40.0% | |
| ! | GATGAAAGTGAGAGTGTGAT+GGG | - | chr8_1:16442610-16442629 | None:intergenic | 40.0% |
| AACTTACATAAAGCCGAAGG+CGG | - | chr8_1:16442666-16442685 | None:intergenic | 40.0% | |
| GAGAACTTACATAAAGCCGA+AGG | - | chr8_1:16442669-16442688 | None:intergenic | 40.0% | |
| ! | TGGAGTTTAACTTACCGACA+TGG | - | chr8_1:16442816-16442835 | None:intergenic | 40.0% |
| ! | GCAGTTTACGTTTTCAGTCT+TGG | + | chr8_1:16442928-16442947 | Msa1181830:intron | 40.0% |
| ! | GTTTTCAGTCTTGGATGATC+AGG | + | chr8_1:16442937-16442956 | Msa1181830:CDS | 40.0% |
| ATTCAGTCTGATCATTCTCC+TGG | + | chr8_1:16442974-16442993 | Msa1181830:CDS | 40.0% | |
| ! | GTTTAGGGTCTGTTTGGATT+AGG | + | chr8_1:16443069-16443088 | Msa1181830:intron | 40.0% |
| !!! | GATAAGGTTCTTGCTGCTTT+TGG | + | chr8_1:16443623-16443642 | Msa1181830:CDS | 40.0% |
| ! | ATGAAAGTGCAAGAGGTTAC+CGG | + | chr8_1:16443906-16443925 | Msa1181830:CDS | 40.0% |
| ! | CATTGGCTACCTATACTTTC+TGG | - | chr8_1:16443993-16444012 | None:intergenic | 40.0% |
| AGCCAATGTTAATGTGCAAG+AGG | + | chr8_1:16444005-16444024 | Msa1181830:exon | 40.0% | |
| GTTAATGTGCAAGAGGTTGT+CGG | + | chr8_1:16444012-16444031 | Msa1181830:exon | 40.0% | |
| ATGATTAAGCATCACCAGCT+CGG | - | chr8_1:16444059-16444078 | None:intergenic | 40.0% | |
| !!! | GAGGAGTTTTAGGCTTTGTT+TGG | + | chr8_1:16444090-16444109 | Msa1181830:three_prime_UTR | 40.0% |
| CCAAAGGAATTGTGTCACGT+TGG | - | chr8_1:16439647-16439666 | None:intergenic | 45.0% | |
| CCAACGTGACACAATTCCTT+TGG | + | chr8_1:16439644-16439663 | Msa1181830:intron | 45.0% | |
| GTGTGGCATAAAGTTGTTGC+AGG | + | chr8_1:16439861-16439880 | Msa1181830:intron | 45.0% | |
| !! | AACCCTGAAAAGGCGTTATG+AGG | + | chr8_1:16439957-16439976 | Msa1181830:CDS | 45.0% |
| ! | CTCCTCATAACGCCTTTTCA+GGG | - | chr8_1:16439962-16439981 | None:intergenic | 45.0% |
| ! | TTGGCTACACCCTTTTTGCT+GGG | + | chr8_1:16440042-16440061 | Msa1181830:intron | 45.0% |
| CTTCAGGATTTGGGCATGTT+AGG | + | chr8_1:16440104-16440123 | Msa1181830:intron | 45.0% | |
| ATTTGGGCATGTTAGGCAAC+TGG | + | chr8_1:16440111-16440130 | Msa1181830:intron | 45.0% | |
| CATGTTAGGCAACTGGTCAT+GGG | + | chr8_1:16440118-16440137 | Msa1181830:intron | 45.0% | |
| ATGTTAGGCAACTGGTCATG+GGG | + | chr8_1:16440119-16440138 | Msa1181830:intron | 45.0% | |
| CAAGGTCATGTAACCACGAA+CGG | - | chr8_1:16440207-16440226 | None:intergenic | 45.0% | |
| CCGAAAACCGCAATCTACAT+CGG | - | chr8_1:16440503-16440522 | None:intergenic | 45.0% | |
| ! | CCGATGTAGATTGCGGTTTT+CGG | + | chr8_1:16440500-16440519 | Msa1181830:intron | 45.0% |
| TAGCTTGACACCCTCTTTAC+TGG | - | chr8_1:16440577-16440596 | None:intergenic | 45.0% | |
| !! | GAGGATGAAGTTGATGAAGG+AGG | - | chr8_1:16440894-16440913 | None:intergenic | 45.0% |
| GTTTCTTGATCGCATAGCCA+TGG | - | chr8_1:16441250-16441269 | None:intergenic | 45.0% | |
| TTGGACAGGTAACACCATGT+GGG | - | chr8_1:16441598-16441617 | None:intergenic | 45.0% | |
| TTTGGACAGGTAACACCATG+TGG | - | chr8_1:16441599-16441618 | None:intergenic | 45.0% | |
| !!! | ACGCAAATTGGGTTTTGGAC+AGG | - | chr8_1:16441612-16441631 | None:intergenic | 45.0% |
| ACGCTCCAATGGATCTTGTT+TGG | + | chr8_1:16441878-16441897 | Msa1181830:intron | 45.0% | |
| GCAGATAGTGTTTAGCGTTG+CGG | + | chr8_1:16442566-16442585 | Msa1181830:intron | 45.0% | |
| ! | GGATGAAAGTGAGAGTGTGA+TGG | - | chr8_1:16442611-16442630 | None:intergenic | 45.0% |
| ! | ACCTGGAATGAAAGTGCAAG+AGG | + | chr8_1:16443899-16443918 | Msa1181830:CDS | 45.0% |
| ACCTCTTGCACTTTCATTCC+AGG | - | chr8_1:16443903-16443922 | None:intergenic | 45.0% | |
| ! | CTACCTATACTTTCTGGTCG+CGG | - | chr8_1:16443987-16444006 | None:intergenic | 45.0% |
| TGATTAAGCATCACCAGCTC+GGG | - | chr8_1:16444058-16444077 | None:intergenic | 45.0% | |
| !!! | GAAATTTTATAATTATTTAA+GGG | - | chr8_1:16440761-16440780 | None:intergenic | 5.0% |
| !!! | TAATTATTAAAAGTATATTT+TGG | + | chr8_1:16442045-16442064 | Msa1181830:intron | 5.0% |
| !!! | AATTATTAAAAGTATATTTT+GGG | + | chr8_1:16442046-16442065 | Msa1181830:intron | 5.0% |
| CGCCCCTTTATTCAGTCTTC+AGG | + | chr8_1:16439441-16439460 | Msa1181830:CDS | 50.0% | |
| TGGCCAAAACGTGACACGAT+TGG | - | chr8_1:16439627-16439646 | None:intergenic | 50.0% | |
| ! | CCTCCTCATAACGCCTTTTC+AGG | - | chr8_1:16439963-16439982 | None:intergenic | 50.0% |
| !! | CCTGAAAAGGCGTTATGAGG+AGG | + | chr8_1:16439960-16439979 | Msa1181830:CDS | 50.0% |
| !! | GAAAAGGCGTTATGAGGAGG+AGG | + | chr8_1:16439963-16439982 | Msa1181830:CDS | 50.0% |
| ! | CTTGGCTACACCCTTTTTGC+TGG | + | chr8_1:16440041-16440060 | Msa1181830:intron | 50.0% |
| CTGCTTGCGCTTCAGGATTT+GGG | + | chr8_1:16440095-16440114 | Msa1181830:intron | 50.0% | |
| GCATGTTAGGCAACTGGTCA+TGG | + | chr8_1:16440117-16440136 | Msa1181830:intron | 50.0% | |
| ! | TCACCGGAGTCGTTGATTGA+TGG | - | chr8_1:16440620-16440639 | None:intergenic | 50.0% |
| TGGATTTAAGTGGCAGACGG+AGG | - | chr8_1:16440832-16440851 | None:intergenic | 50.0% | |
| GCGTTCACTGCAAACACGAA+TGG | + | chr8_1:16441278-16441297 | Msa1181830:intron | 50.0% | |
| CAGATCTGCCATCACAACGA+CGG | + | chr8_1:16441319-16441338 | Msa1181830:intron | 50.0% | |
| TGTTGTAGCCGTCGTTGTGA+TGG | - | chr8_1:16441330-16441349 | None:intergenic | 50.0% | |
| AGGTAACACCATGTGGGTTC+TGG | - | chr8_1:16441592-16441611 | None:intergenic | 50.0% | |
| ! | CGCCGGATTTGAGTTCATCT+AGG | - | chr8_1:16441650-16441669 | None:intergenic | 50.0% |
| ! | ATCCATTGGAGCGTCTACGA+CGG | - | chr8_1:16441872-16441891 | None:intergenic | 50.0% |
| GGCCAAGGACAAAATGGGTA+TGG | - | chr8_1:16442543-16442562 | None:intergenic | 50.0% | |
| GCATGGGCCAAGGACAAAAT+GGG | - | chr8_1:16442548-16442567 | None:intergenic | 50.0% | |
| TGCATGGGCCAAGGACAAAA+TGG | - | chr8_1:16442549-16442568 | None:intergenic | 50.0% | |
| AACACTATCTGCATGGGCCA+AGG | - | chr8_1:16442558-16442577 | None:intergenic | 50.0% | |
| CTCTGTTGTTAATAGCGGCG+CGG | + | chr8_1:16443307-16443326 | Msa1181830:intron | 50.0% | |
| !! | CGGGTCAATAGCTTGTTTCG+CGG | + | chr8_1:16443392-16443411 | Msa1181830:intron | 50.0% |
| GATTCTCTTCTTGCTGCACC+TGG | + | chr8_1:16443882-16443901 | Msa1181830:CDS | 50.0% | |
| ACCGGAGATGTCCAAATGAC+AGG | + | chr8_1:16443924-16443943 | Msa1181830:CDS | 50.0% | |
| ! | GCCTGTCATTTGGACATCTC+CGG | - | chr8_1:16443928-16443947 | None:intergenic | 50.0% |
| CAGCTCGGGTATCTGTCATT+TGG | - | chr8_1:16444044-16444063 | None:intergenic | 50.0% | |
| CAAATGACAGATACCCGAGC+TGG | + | chr8_1:16444042-16444061 | Msa1181830:three_prime_UTR | 50.0% | |
| AGATGAGGATGCCACAGAGC+AGG | + | chr8_1:16439900-16439919 | Msa1181830:CDS | 55.0% | |
| ! | AAGGCGTTATGAGGAGGAGG+AGG | + | chr8_1:16439966-16439985 | Msa1181830:CDS | 55.0% |
| GCTGCTTGCGCTTCAGGATT+TGG | + | chr8_1:16440094-16440113 | Msa1181830:intron | 55.0% | |
| GGCGACAACAGATGAGTCGA+AGG | - | chr8_1:16440186-16440205 | None:intergenic | 55.0% | |
| TCATCTGTTGTCGCCGTTCG+TGG | + | chr8_1:16440191-16440210 | Msa1181830:CDS | 55.0% | |
| GGCAGACGGAGGTAACTTAG+AGG | - | chr8_1:16440821-16440840 | None:intergenic | 55.0% | |
| GAGCGTTACCAGAACCCACA+TGG | + | chr8_1:16441581-16441600 | Msa1181830:intron | 55.0% | |
| CAGACGGAGTAGATGCGGTA+TGG | - | chr8_1:16442632-16442651 | None:intergenic | 55.0% | |
| ACCGCATCTACTCCGTCTGT+CGG | + | chr8_1:16442633-16442652 | Msa1181830:CDS | 55.0% | |
| ACCGACAGACGGAGTAGATG+CGG | - | chr8_1:16442637-16442656 | None:intergenic | 55.0% | |
| ACCCGCTTTACCCTAAAGCG+CGG | - | chr8_1:16443377-16443396 | None:intergenic | 55.0% | |
| ! | AAGGCGCTTTGACCCGCTAT+TGG | - | chr8_1:16443443-16443462 | None:intergenic | 55.0% |
| ! | TCTGGTCGCGGCCTTTTTCT+TGG | - | chr8_1:16443975-16443994 | None:intergenic | 55.0% |
| ! | AGGCCGCGACCAGAAAGTAT+AGG | + | chr8_1:16443981-16444000 | Msa1181830:CDS | 55.0% |
| GTTGTGGCTGCTTGCGCTTC+AGG | + | chr8_1:16440088-16440107 | Msa1181830:intron | 60.0% | |
| TAGGCAACTGGTCATGGGGC+TGG | + | chr8_1:16440123-16440142 | Msa1181830:intron | 60.0% | |
| GCATCTACTCCGTCTGTCGG+TGG | + | chr8_1:16442636-16442655 | Msa1181830:CDS | 60.0% | |
| TGTCGGTGGAGATCCGCCTT+CGG | + | chr8_1:16442650-16442669 | Msa1181830:CDS | 60.0% | |
| !! | CGCCGCGCTTTAGGGTAAAG+CGG | + | chr8_1:16443372-16443391 | Msa1181830:intron | 60.0% |
| !! | GCCGCGCTTTAGGGTAAAGC+GGG | + | chr8_1:16443373-16443392 | Msa1181830:intron | 60.0% |
| CTTGTTTCGCGGCCGCTATC+CGG | + | chr8_1:16443403-16443422 | Msa1181830:intron | 60.0% | |
| CGCCGTCGTAGACGCTCCAA+TGG | + | chr8_1:16441867-16441886 | Msa1181830:intron | 65.0% | |
| GGCGGATCTCCACCGACAGA+CGG | - | chr8_1:16442648-16442667 | None:intergenic | 65.0% | |
| ! | GACTCGGTAGCGCTCTGACG+CGG | - | chr8_1:16443351-16443370 | None:intergenic | 65.0% |
| GGAGTGGGGCGGACCAATAG+CGG | + | chr8_1:16443427-16443446 | Msa1181830:intron | 65.0% | |
| GAGTGGGGCGGACCAATAGC+GGG | + | chr8_1:16443428-16443447 | Msa1181830:intron | 65.0% | |
| CGGTAGCGCTCTGACGCGGT+AGG | - | chr8_1:16443347-16443366 | None:intergenic | 70.0% | |
| ACCGAGTCGCGCCGCGCTTT+AGG | + | chr8_1:16443363-16443382 | Msa1181830:intron | 70.0% | |
| CCCTAAAGCGCGGCGCGACT+CGG | - | chr8_1:16443367-16443386 | None:intergenic | 70.0% | |
| CCGAGTCGCGCCGCGCTTTA+GGG | + | chr8_1:16443364-16443383 | Msa1181830:intron | 70.0% | |
| GTTTCGCGGCCGCTATCCGG+CGG | + | chr8_1:16443406-16443425 | Msa1181830:intron | 70.0% | |
| ATTGGTCCGCCCCACTCCGC+CGG | - | chr8_1:16443425-16443444 | None:intergenic | 70.0% | |
| CGGCCGCTATCCGGCGGAGT+GGG | + | chr8_1:16443412-16443431 | Msa1181830:intron | 75.0% | |
| GGCCGCTATCCGGCGGAGTG+GGG | + | chr8_1:16443413-16443432 | Msa1181830:intron | 75.0% | |
| CGCCCCACTCCGCCGGATAG+CGG | - | chr8_1:16443418-16443437 | None:intergenic | 75.0% | |
| CGCTATCCGGCGGAGTGGGG+CGG | + | chr8_1:16443416-16443435 | Msa1181830:intron | 75.0% | |
| ! | GCGGCCGCTATCCGGCGGAG+TGG | + | chr8_1:16443411-16443430 | Msa1181830:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 16439430 | 16444296 | 16439430 | ID=Msa1181830;Name=Msa1181830 |
| chr8_1 | mRNA | 16439430 | 16444296 | 16439430 | ID=Msa1181830-mRNA-1;Parent=Msa1181830;Name=Msa1181830-mRNA-1;_AED=0.16;_eAED=0.16;_QI=0|0.5|0.44|0.66|0.87|0.77|9|258|207 |
| chr8_1 | exon | 16439430 | 16439462 | 16439430 | ID=Msa1181830-mRNA-1:exon:6143;Parent=Msa1181830-mRNA-1 |
| chr8_1 | exon | 16439883 | 16439987 | 16439883 | ID=Msa1181830-mRNA-1:exon:6144;Parent=Msa1181830-mRNA-1 |
| chr8_1 | exon | 16440173 | 16440232 | 16440173 | ID=Msa1181830-mRNA-1:exon:6145;Parent=Msa1181830-mRNA-1 |
| chr8_1 | exon | 16442570 | 16442678 | 16442570 | ID=Msa1181830-mRNA-1:exon:6146;Parent=Msa1181830-mRNA-1 |
| chr8_1 | exon | 16442798 | 16442820 | 16442798 | ID=Msa1181830-mRNA-1:exon:6147;Parent=Msa1181830-mRNA-1 |
| chr8_1 | exon | 16442932 | 16442995 | 16442932 | ID=Msa1181830-mRNA-1:exon:6148;Parent=Msa1181830-mRNA-1 |
| chr8_1 | exon | 16443606 | 16443683 | 16443606 | ID=Msa1181830-mRNA-1:exon:6149;Parent=Msa1181830-mRNA-1 |
| chr8_1 | exon | 16443865 | 16444197 | 16443865 | ID=Msa1181830-mRNA-1:exon:6150;Parent=Msa1181830-mRNA-1 |
| chr8_1 | exon | 16444220 | 16444296 | 16444220 | ID=Msa1181830-mRNA-1:exon:6151;Parent=Msa1181830-mRNA-1 |
| chr8_1 | CDS | 16439430 | 16439462 | 16439430 | ID=Msa1181830-mRNA-1:cds;Parent=Msa1181830-mRNA-1 |
| chr8_1 | CDS | 16439883 | 16439987 | 16439883 | ID=Msa1181830-mRNA-1:cds;Parent=Msa1181830-mRNA-1 |
| chr8_1 | CDS | 16440173 | 16440232 | 16440173 | ID=Msa1181830-mRNA-1:cds;Parent=Msa1181830-mRNA-1 |
| chr8_1 | CDS | 16442570 | 16442678 | 16442570 | ID=Msa1181830-mRNA-1:cds;Parent=Msa1181830-mRNA-1 |
| chr8_1 | CDS | 16442798 | 16442820 | 16442798 | ID=Msa1181830-mRNA-1:cds;Parent=Msa1181830-mRNA-1 |
| chr8_1 | CDS | 16442932 | 16442995 | 16442932 | ID=Msa1181830-mRNA-1:cds;Parent=Msa1181830-mRNA-1 |
| chr8_1 | CDS | 16443606 | 16443683 | 16443606 | ID=Msa1181830-mRNA-1:cds;Parent=Msa1181830-mRNA-1 |
| chr8_1 | CDS | 16443865 | 16444016 | 16443865 | ID=Msa1181830-mRNA-1:cds;Parent=Msa1181830-mRNA-1 |
| chr8_1 | three_prime_UTR | 16444017 | 16444197 | 16444017 | ID=Msa1181830-mRNA-1:three_prime_utr;Parent=Msa1181830-mRNA-1 |
| chr8_1 | three_prime_UTR | 16444220 | 16444296 | 16444220 | ID=Msa1181830-mRNA-1:three_prime_utr;Parent=Msa1181830-mRNA-1 |
| Gene Sequence |
| Protein sequence |
