AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1275540

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1275540 MtrunA17_Chr8g0342571 96.875 96 3 0 1 96 1 96 1.91e-60 179
Msa1275540 MtrunA17_Chr2g0299631 39.706 136 25 3 8 86 91 226 2.23e-17 73.6
Msa1275540 MtrunA17_Chr2g0299631 54.545 77 34 1 7 82 44 120 6.20e-17 72.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1275540 AT1G72690.1 58.442 77 30 1 14 88 9 85 3.86e-26 92.8
Msa1275540 AT5G57000.2 54.795 73 29 1 18 86 23 95 3.77e-18 73.9
Msa1275540 AT5G57000.1 54.795 73 29 1 18 86 70 142 9.20e-18 74.3
Msa1275540 AT1G17490.1 50.725 69 27 1 21 89 15 76 4.84e-17 69.3

Find 51 sgRNAs with CRISPR-Local

Find 558 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAACTTAATGATTCGGTTTC+AGG 0.197193 8_3:-9557466 Msa1275540:intron
GTTTAGCTTGACGATGAATT+TGG 0.208179 8_3:-9553855 Msa1275540:three_prime_UTR
ACTCTTTGTTACATAATAAA+AGG 0.230852 8_3:+9553895 None:intergenic
TGAAACCGAATCATTAAGTT+TGG 0.256006 8_3:+9557468 None:intergenic
GTTGATGTTCCCTTTAGATA+TGG 0.289908 8_3:-9553663 Msa1275540:three_prime_UTR
CCTCAAACTCAAACGTTGTT+TGG 0.294262 8_3:-9557516 Msa1275540:five_prime_UTR
TTAGTGTCAGATACTTTCTT+GGG 0.308999 8_3:+9553990 None:intergenic
CCAAACAACGTTTGAGTTTG+AGG 0.332128 8_3:+9557516 None:intergenic
CTTAGTGTCAGATACTTTCT+TGG 0.343708 8_3:+9553989 None:intergenic
TTAGCCCTCTCAAGAATGTT+TGG 0.369322 8_3:+9554182 None:intergenic
GATCAATTCAATGGCAGAAA+AGG 0.390241 8_3:-9557494 Msa1275540:exon
GAAACCGAATCATTAAGTTT+GGG 0.402495 8_3:+9557469 None:intergenic
CGTTGTTTGGATCAATTCAA+TGG 0.403360 8_3:-9557503 Msa1275540:exon
GGAACCCAAACTTAATGATT+CGG 0.408365 8_3:-9557473 Msa1275540:CDS
AACAGCTATGATCACTTTGA+TGG 0.413880 8_3:+9553960 None:intergenic
TTCCATGAGTTTCTTTGTCA+TGG 0.419220 8_3:+9554117 None:intergenic
AGATACTTTCTTGGGGAGAA+TGG 0.422648 8_3:+9553998 None:intergenic
TTTCCTTTGCTGAAAACAAA+AGG 0.425195 8_3:+9553593 None:intergenic
ATAATACTTTCCATATCTAA+AGG 0.433907 8_3:+9553653 None:intergenic
ATCGCCATGCTACCATGGTT+TGG 0.441123 8_3:-9553773 Msa1275540:three_prime_UTR
TCAAGCTAAACATAAGTAAG+AGG 0.446009 8_3:+9553867 None:intergenic
GCAAATCATAGTTATTAGCT+AGG 0.467026 8_3:-9553923 Msa1275540:three_prime_UTR
TCTTATCAACTAAAGAAACT+TGG 0.467724 8_3:-9557631 Msa1275540:five_prime_UTR
AAGCTCCCGGTGTGTTTGAA+AGG 0.468558 8_3:-9554052 Msa1275540:CDS
TAATACTTTCCATATCTAAA+GGG 0.473338 8_3:+9553654 None:intergenic
TGTTGAGAGCATTGGAATCT+CGG 0.476667 8_3:+9553740 None:intergenic
ATTAACACTGTTGAGAGCAT+TGG 0.477412 8_3:+9553732 None:intergenic
CTATACTACTATGTTTGCCT+TGG 0.484853 8_3:-9553701 Msa1275540:three_prime_UTR
AGCTCCCGGTGTGTTTGAAA+GGG 0.525240 8_3:-9554051 Msa1275540:CDS
TGATAATGAAACACTCCAAA+GGG 0.534426 8_3:+9553564 None:intergenic
CGCCATGACAAAGAAACTCA+TGG 0.536708 8_3:-9554119 Msa1275540:CDS
CAAGAAAGTATCTGACACTA+AGG 0.540357 8_3:-9553988 Msa1275540:CDS
CATTCTTGAGAGGGCTAAGG+AGG 0.553782 8_3:-9554177 Msa1275540:CDS
AAACATTCTTGAGAGGGCTA+AGG 0.562461 8_3:-9554180 Msa1275540:CDS
CTTCACCCTTTCAAACACAC+CGG 0.571153 8_3:+9554046 None:intergenic
AGCTCCAAACATTCTTGAGA+GGG 0.578483 8_3:-9554186 Msa1275540:CDS
GTTGAAGAAGTCAAAGCTCC+CGG 0.580117 8_3:-9554065 Msa1275540:CDS
ATAAAATCGCCATGCTACCA+TGG 0.580809 8_3:-9553778 Msa1275540:three_prime_UTR
TGAGTTTCTTTGTCATGGCG+AGG 0.584602 8_3:+9554122 None:intergenic
TTGATAATGAAACACTCCAA+AGG 0.592593 8_3:+9553563 None:intergenic
CGGTGTGTTTGAAAGGGTGA+AGG 0.593554 8_3:-9554045 Msa1275540:CDS
TTCACCCTTTCAAACACACC+GGG 0.602200 8_3:+9554047 None:intergenic
AAGCTCCAAACATTCTTGAG+AGG 0.602370 8_3:-9554187 Msa1275540:CDS
TTAACCAAACCATGGTAGCA+TGG 0.603828 8_3:+9553769 None:intergenic
TAGTGTCAGATACTTTCTTG+GGG 0.605693 8_3:+9553991 None:intergenic
GAGGGCTAAGGAGGAGACTG+AGG 0.618637 8_3:-9554168 Msa1275540:CDS
AGAGCTTGAAGCTGTAGTTG+AGG 0.634155 8_3:-9554021 Msa1275540:CDS
ATGACAAAGAAACTCATGGA+AGG 0.643744 8_3:-9554115 Msa1275540:CDS
AAGGAATGATGACATTGATG+AGG 0.657096 8_3:-9554096 Msa1275540:CDS
GGTGTAATTTAACCAAACCA+TGG 0.667019 8_3:+9553761 None:intergenic
AGGAATGATGACATTGATGA+GGG 0.670735 8_3:-9554095 Msa1275540:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAGAATATTATTTGTAAAA+CGG + chr8_3:9553772-9553791 None:intergenic 10.0%
!! TAAGAATATTATTTGTAAAA+CGG + chr8_3:9553772-9553791 None:intergenic 10.0%
!! CTAATTTCTATAACTAAAAA+GGG + chr8_3:9553883-9553902 None:intergenic 15.0%
!!! TTTTTAGTTATAGAAATTAG+CGG - chr8_3:9553883-9553902 Msa1275540:three_prime_UTR 15.0%
!! ATAAAATATAATAACCAACA+CGG + chr8_3:9555054-9555073 None:intergenic 15.0%
!!! ATATTTTATTGAAAATGACA+TGG - chr8_3:9555065-9555084 Msa1275540:intron 15.0%
!!! ATAATCTCTGTATAAATTTT+CGG + chr8_3:9555190-9555209 None:intergenic 15.0%
!! AAAACATGATAAGTAATTAT+TGG - chr8_3:9555641-9555660 Msa1275540:intron 15.0%
!!! TTATTGGTTTTAGATATATA+TGG - chr8_3:9555657-9555676 Msa1275540:intron 15.0%
!!! TATTGGTTTTAGATATATAT+GGG - chr8_3:9555658-9555677 Msa1275540:intron 15.0%
!!! TGACTATTTTATAAATGATT+TGG - chr8_3:9555722-9555741 Msa1275540:intron 15.0%
!! TGTTATATTATTGTATTGAA+AGG - chr8_3:9556264-9556283 Msa1275540:intron 15.0%
!! GTTATATTATTGTATTGAAA+GGG - chr8_3:9556265-9556284 Msa1275540:intron 15.0%
!!! TGACTATTTTATAAATGATT+TGG - chr8_3:9555722-9555741 Msa1275540:intron 15.0%
!!! TCTTATTTTAATTGTTCATT+TGG - chr8_3:9557553-9557572 Msa1275540:five_prime_UTR 15.0%
!! CTAATTTCTATAACTAAAAA+GGG + chr8_3:9553883-9553902 None:intergenic 15.0%
!!! TTTTTAGTTATAGAAATTAG+CGG - chr8_3:9553883-9553902 Msa1275540:three_prime_UTR 15.0%
!! ATAAAATATAATAACCAACA+CGG + chr8_3:9555054-9555073 None:intergenic 15.0%
!!! ATATTTTATTGAAAATGACA+TGG - chr8_3:9555065-9555084 Msa1275540:intron 15.0%
!!! ATAATCTCTGTATAAATTTT+CGG + chr8_3:9555190-9555209 None:intergenic 15.0%
!! AAAACATGATAAGTAATTAT+TGG - chr8_3:9555641-9555660 Msa1275540:intron 15.0%
!!! TTATTGGTTTTAGATATATA+TGG - chr8_3:9555657-9555676 Msa1275540:intron 15.0%
!!! TATTGGTTTTAGATATATAT+GGG - chr8_3:9555658-9555677 Msa1275540:intron 15.0%
!!! TGACTATTTTATAAATGATT+TGG - chr8_3:9555722-9555741 Msa1275540:intron 15.0%
!! TGTTATATTATTGTATTGAA+AGG - chr8_3:9556264-9556283 Msa1275540:intron 15.0%
!! GTTATATTATTGTATTGAAA+GGG - chr8_3:9556265-9556284 Msa1275540:intron 15.0%
!!! TGACTATTTTATAAATGATT+TGG - chr8_3:9555722-9555741 Msa1275540:intron 15.0%
!!! TCTTATTTTAATTGTTCATT+TGG - chr8_3:9557553-9557572 Msa1275540:five_prime_UTR 15.0%
!!! TATTCTTGATTTAGATTTTG+TGG - chr8_3:9553793-9553812 Msa1275540:three_prime_UTR 20.0%
!! GCTAATTTCTATAACTAAAA+AGG + chr8_3:9553884-9553903 None:intergenic 20.0%
!!! TTTTAGTTATAGAAATTAGC+GGG - chr8_3:9553884-9553903 Msa1275540:three_prime_UTR 20.0%
!!! TGTAGTTTTTGTCAATATTA+TGG - chr8_3:9554434-9554453 Msa1275540:intron 20.0%
!!! TTTTCTAACTCACAATAATT+AGG - chr8_3:9554875-9554894 Msa1275540:intron 20.0%
!!! ATCTAGTTTTTTCTTTAATC+AGG - chr8_3:9554979-9554998 Msa1275540:intron 20.0%
!!! TCTAGTTTTTTCTTTAATCA+GGG - chr8_3:9554980-9554999 Msa1275540:intron 20.0%
!!! TAATCTCTGTATAAATTTTC+GGG + chr8_3:9555189-9555208 None:intergenic 20.0%
!!! GTTTTTTCTTTAATTAGAGT+TGG - chr8_3:9556170-9556189 Msa1275540:intron 20.0%
!! ATACAATAATATAACAAGCA+TGG + chr8_3:9556260-9556279 None:intergenic 20.0%
!! GAAACATGATAAGTAATTAT+TGG - chr8_3:9556824-9556843 Msa1275540:intron 20.0%
!!! GATAAGTAATTATTGGTTTT+AGG - chr8_3:9555648-9555667 Msa1275540:intron 20.0%
!! TGAAACAGAATATACAAAAA+GGG + chr8_3:9556951-9556970 None:intergenic 20.0%
!! ATGAAACAGAATATACAAAA+AGG + chr8_3:9556952-9556971 None:intergenic 20.0%
!! ACTCTTTGTTACATAATAAA+AGG + chr8_3:9557286-9557305 None:intergenic 20.0%
!! TAATACTTTCCATATCTAAA+GGG + chr8_3:9557527-9557546 None:intergenic 20.0%
!! ATAATACTTTCCATATCTAA+AGG + chr8_3:9557528-9557547 None:intergenic 20.0%
!!! TATTTTAATTGTTCATTTGG+AGG - chr8_3:9557556-9557575 Msa1275540:five_prime_UTR 20.0%
!!! TATTCTTGATTTAGATTTTG+TGG - chr8_3:9553793-9553812 Msa1275540:three_prime_UTR 20.0%
!! GCTAATTTCTATAACTAAAA+AGG + chr8_3:9553884-9553903 None:intergenic 20.0%
!!! TTTTAGTTATAGAAATTAGC+GGG - chr8_3:9553884-9553903 Msa1275540:three_prime_UTR 20.0%
!!! TGTAGTTTTTGTCAATATTA+TGG - chr8_3:9554434-9554453 Msa1275540:intron 20.0%
!!! TTTTCTAACTCACAATAATT+AGG - chr8_3:9554875-9554894 Msa1275540:intron 20.0%
!!! ATCTAGTTTTTTCTTTAATC+AGG - chr8_3:9554979-9554998 Msa1275540:intron 20.0%
!!! TCTAGTTTTTTCTTTAATCA+GGG - chr8_3:9554980-9554999 Msa1275540:intron 20.0%
!!! TAATCTCTGTATAAATTTTC+GGG + chr8_3:9555189-9555208 None:intergenic 20.0%
!!! GTTTTTTCTTTAATTAGAGT+TGG - chr8_3:9556170-9556189 Msa1275540:intron 20.0%
!! ATACAATAATATAACAAGCA+TGG + chr8_3:9556260-9556279 None:intergenic 20.0%
!! GAAACATGATAAGTAATTAT+TGG - chr8_3:9556824-9556843 Msa1275540:intron 20.0%
!!! GATAAGTAATTATTGGTTTT+AGG - chr8_3:9555648-9555667 Msa1275540:intron 20.0%
!! TGAAACAGAATATACAAAAA+GGG + chr8_3:9556951-9556970 None:intergenic 20.0%
!! ATGAAACAGAATATACAAAA+AGG + chr8_3:9556952-9556971 None:intergenic 20.0%
!! ACTCTTTGTTACATAATAAA+AGG + chr8_3:9557286-9557305 None:intergenic 20.0%
!! TAATACTTTCCATATCTAAA+GGG + chr8_3:9557527-9557546 None:intergenic 20.0%
!! ATAATACTTTCCATATCTAA+AGG + chr8_3:9557528-9557547 None:intergenic 20.0%
!!! TATTTTAATTGTTCATTTGG+AGG - chr8_3:9557556-9557575 Msa1275540:five_prime_UTR 20.0%
!!! AATAACAGTGAACCTTTTTT+TGG - chr8_3:9553592-9553611 Msa1275540:three_prime_UTR 25.0%
! TATAACTAAAAAGGGTAGTA+TGG + chr8_3:9553875-9553894 None:intergenic 25.0%
! GAAAATAACTTTCAACAATG+GGG + chr8_3:9553964-9553983 None:intergenic 25.0%
! GGAAAATAACTTTCAACAAT+GGG + chr8_3:9553965-9553984 None:intergenic 25.0%
! AGGAAAATAACTTTCAACAA+TGG + chr8_3:9553966-9553985 None:intergenic 25.0%
!!! GTTGAAAGTTATTTTCCTTT+TGG - chr8_3:9553968-9553987 Msa1275540:exon 25.0%
!!! ATTTTTTGAAGCTCAATATC+CGG - chr8_3:9554029-9554048 Msa1275540:CDS 25.0%
! TGTAATATGCATGAGTTTAT+AGG + chr8_3:9554226-9554245 None:intergenic 25.0%
! TGGTGAATTTAACAAAATCA+CGG + chr8_3:9554465-9554484 None:intergenic 25.0%
! TAAGTTTGACAAAATTACAG+TGG - chr8_3:9554539-9554558 Msa1275540:intron 25.0%
! GTGAGATTGACATTTATATT+GGG + chr8_3:9554617-9554636 None:intergenic 25.0%
! TGAGTGTATATTTGGATAAA+CGG + chr8_3:9554639-9554658 None:intergenic 25.0%
! ACATGATAAGAATCTATTTG+TGG - chr8_3:9554753-9554772 Msa1275540:intron 25.0%
!! TCTGAAAGTTCTTTTCTTTT+TGG - chr8_3:9554818-9554837 Msa1275540:intron 25.0%
!! ATGGATGTTTTATCTTTGAA+AGG - chr8_3:9555084-9555103 Msa1275540:intron 25.0%
!! TGTAGCTTTTGTCAAAATTA+TGG - chr8_3:9555348-9555367 Msa1275540:intron 25.0%
! ATTTGGATTTACAGTGAATT+TGG + chr8_3:9555516-9555535 None:intergenic 25.0%
! ATAAGATTTGAGTGCATATT+TGG + chr8_3:9555533-9555552 None:intergenic 25.0%
! AGGAAAATAACTTTCAACAA+TGG + chr8_3:9553966-9553985 None:intergenic 25.0%
!!! GTTGAAAGTTATTTTCCTTT+TGG - chr8_3:9553968-9553987 Msa1275540:exon 25.0%
! AAACAATTCCTATGTTTGAT+CGG + chr8_3:9555944-9555963 None:intergenic 25.0%
! ATCAACGATACAAATTATTG+GGG + chr8_3:9556073-9556092 None:intergenic 25.0%
! GATCAACGATACAAATTATT+GGG + chr8_3:9556074-9556093 None:intergenic 25.0%
! TTATTGTATTGAAAGGGATA+TGG - chr8_3:9556271-9556290 Msa1275540:intron 25.0%
!!! TATGGAGGTTTTATTTTGAA+AGG - chr8_3:9556289-9556308 Msa1275540:intron 25.0%
!!! TTATTTTGAAAGGAGTATAG+AGG - chr8_3:9556299-9556318 Msa1275540:intron 25.0%
! TAATCTCCATAAAAGTCATT+AGG + chr8_3:9556388-9556407 None:intergenic 25.0%
!!! TTATTGGTTTTAGGTATATG+TGG - chr8_3:9556840-9556859 Msa1275540:intron 25.0%
!!! TATTGGTTTTAGGTATATGT+GGG - chr8_3:9556841-9556860 Msa1275540:intron 25.0%
! TTTGACAAAAATTGCACTTT+AGG - chr8_3:9557371-9557390 Msa1275540:intron 25.0%
!!! AATAACAGTGAACCTTTTTT+TGG - chr8_3:9553592-9553611 Msa1275540:three_prime_UTR 25.0%
! TATAACTAAAAAGGGTAGTA+TGG + chr8_3:9553875-9553894 None:intergenic 25.0%
! GAAAATAACTTTCAACAATG+GGG + chr8_3:9553964-9553983 None:intergenic 25.0%
! GGAAAATAACTTTCAACAAT+GGG + chr8_3:9553965-9553984 None:intergenic 25.0%
! AGGAAAATAACTTTCAACAA+TGG + chr8_3:9553966-9553985 None:intergenic 25.0%
!!! GTTGAAAGTTATTTTCCTTT+TGG - chr8_3:9553968-9553987 Msa1275540:exon 25.0%
!!! ATTTTTTGAAGCTCAATATC+CGG - chr8_3:9554029-9554048 Msa1275540:CDS 25.0%
! TGTAATATGCATGAGTTTAT+AGG + chr8_3:9554226-9554245 None:intergenic 25.0%
! TGGTGAATTTAACAAAATCA+CGG + chr8_3:9554465-9554484 None:intergenic 25.0%
! TAAGTTTGACAAAATTACAG+TGG - chr8_3:9554539-9554558 Msa1275540:intron 25.0%
! GTGAGATTGACATTTATATT+GGG + chr8_3:9554617-9554636 None:intergenic 25.0%
! TGAGTGTATATTTGGATAAA+CGG + chr8_3:9554639-9554658 None:intergenic 25.0%
! ACATGATAAGAATCTATTTG+TGG - chr8_3:9554753-9554772 Msa1275540:intron 25.0%
!! TCTGAAAGTTCTTTTCTTTT+TGG - chr8_3:9554818-9554837 Msa1275540:intron 25.0%
!! ATGGATGTTTTATCTTTGAA+AGG - chr8_3:9555084-9555103 Msa1275540:intron 25.0%
!! TGTAGCTTTTGTCAAAATTA+TGG - chr8_3:9555348-9555367 Msa1275540:intron 25.0%
! ATTTGGATTTACAGTGAATT+TGG + chr8_3:9555516-9555535 None:intergenic 25.0%
! ATAAGATTTGAGTGCATATT+TGG + chr8_3:9555533-9555552 None:intergenic 25.0%
! AGGAAAATAACTTTCAACAA+TGG + chr8_3:9553966-9553985 None:intergenic 25.0%
!!! GTTGAAAGTTATTTTCCTTT+TGG - chr8_3:9553968-9553987 Msa1275540:exon 25.0%
! AAACAATTCCTATGTTTGAT+CGG + chr8_3:9555944-9555963 None:intergenic 25.0%
! ATCAACGATACAAATTATTG+GGG + chr8_3:9556073-9556092 None:intergenic 25.0%
! GATCAACGATACAAATTATT+GGG + chr8_3:9556074-9556093 None:intergenic 25.0%
! TTATTGTATTGAAAGGGATA+TGG - chr8_3:9556271-9556290 Msa1275540:intron 25.0%
!!! TATGGAGGTTTTATTTTGAA+AGG - chr8_3:9556289-9556308 Msa1275540:intron 25.0%
!!! TTATTTTGAAAGGAGTATAG+AGG - chr8_3:9556299-9556318 Msa1275540:intron 25.0%
! TAATCTCCATAAAAGTCATT+AGG + chr8_3:9556388-9556407 None:intergenic 25.0%
!!! TTATTGGTTTTAGGTATATG+TGG - chr8_3:9556840-9556859 Msa1275540:intron 25.0%
!!! TATTGGTTTTAGGTATATGT+GGG - chr8_3:9556841-9556860 Msa1275540:intron 25.0%
! TTTGACAAAAATTGCACTTT+AGG - chr8_3:9557371-9557390 Msa1275540:intron 25.0%
GAAACCGAATCATTAAGTTT+GGG + chr8_3:9553712-9553731 None:intergenic 30.0%
TGAAACCGAATCATTAAGTT+TGG + chr8_3:9553713-9553732 None:intergenic 30.0%
!! AAACTTAATGATTCGGTTTC+AGG - chr8_3:9553712-9553731 Msa1275540:three_prime_UTR 30.0%
!! AGTTATTTTCCTTTTGGTTG+TGG - chr8_3:9553974-9553993 Msa1275540:CDS 30.0%
ACCAATGCTAATGACTTATA+TGG - chr8_3:9554266-9554285 Msa1275540:intron 30.0%
TCCATATAAGTCATTAGCAT+TGG + chr8_3:9554270-9554289 None:intergenic 30.0%
TGTTTAACTCAATGCATGTT+TGG - chr8_3:9554353-9554372 Msa1275540:intron 30.0%
! AAACATGCACGTAATGATTT+TGG - chr8_3:9554492-9554511 Msa1275540:intron 30.0%
!!! ATTTTGGTTCATTGCAAGTT+TGG - chr8_3:9554508-9554527 Msa1275540:intron 30.0%
!!! TTTTGGTTCATTGCAAGTTT+GGG - chr8_3:9554509-9554528 Msa1275540:intron 30.0%
GGTGAGATTGACATTTATAT+TGG + chr8_3:9554618-9554637 None:intergenic 30.0%
GTAGGATTTGAGTGTATATT+TGG + chr8_3:9554647-9554666 None:intergenic 30.0%
GAAAAGAACTTTCAGAAATG+AGG + chr8_3:9554814-9554833 None:intergenic 30.0%
!!! AGTTCTTTTCTTTTTGGTTG+TGG - chr8_3:9554824-9554843 Msa1275540:intron 30.0%
!!! GTTTTTTCTTTAATCAGGGT+TGG - chr8_3:9554984-9555003 Msa1275540:intron 30.0%
!! TCTGTATAAATTTTCGGGAT+TGG + chr8_3:9555184-9555203 None:intergenic 30.0%
! TTAATGCATGTTTGGATTAG+CGG - chr8_3:9555275-9555294 Msa1275540:intron 30.0%
TAAGTGCATGTTTGAATTGA+TGG + chr8_3:9555398-9555417 None:intergenic 30.0%
!! AGTTATTTTCCTTTTGGTTG+TGG - chr8_3:9553974-9553993 Msa1275540:CDS 30.0%
CTTTCTTGAAGTTTAGTATC+CGG - chr8_3:9555834-9555853 Msa1275540:intron 30.0%
TTCAAACCTAAGATCTATAG+AGG - chr8_3:9555977-9555996 Msa1275540:intron 30.0%
TCAAACCTAAGATCTATAGA+GGG - chr8_3:9555978-9555997 Msa1275540:intron 30.0%
GGATCAACGATACAAATTAT+TGG + chr8_3:9556075-9556094 None:intergenic 30.0%
TTCAGGTATACCTATAACTT+AGG - chr8_3:9556105-9556124 Msa1275540:intron 30.0%
TCATAGCATACCTAAGTTAT+AGG + chr8_3:9556118-9556137 None:intergenic 30.0%
TGTAATATGCTTGAGTTCAT+AGG + chr8_3:9556339-9556358 None:intergenic 30.0%
! ACCAATCCTAATGACTTTTA+TGG - chr8_3:9556379-9556398 Msa1275540:intron 30.0%
TCCATAAAAGTCATTAGGAT+TGG + chr8_3:9556383-9556402 None:intergenic 30.0%
TTGAGTGCATATTGGATTAA+CGG + chr8_3:9556720-9556739 None:intergenic 30.0%
TTAGTGTCAGATACTTTCTT+GGG + chr8_3:9557191-9557210 None:intergenic 30.0%
GCAAATCATAGTTATTAGCT+AGG - chr8_3:9557255-9557274 Msa1275540:intron 30.0%
TCAAGCTAAACATAAGTAAG+AGG + chr8_3:9557314-9557333 None:intergenic 30.0%
!!! AATCCTTTTGTTTTCAGCAA+AGG - chr8_3:9557582-9557601 Msa1275540:five_prime_UTR 30.0%
TTTCCTTTGCTGAAAACAAA+AGG + chr8_3:9557588-9557607 None:intergenic 30.0%
CAAAGGAAAAAATTACCCTT+TGG - chr8_3:9557599-9557618 Msa1275540:five_prime_UTR 30.0%
! TGATAATGAAACACTCCAAA+GGG + chr8_3:9557617-9557636 None:intergenic 30.0%
!! TTGATAATGAAACACTCCAA+AGG + chr8_3:9557618-9557637 None:intergenic 30.0%
GAAACCGAATCATTAAGTTT+GGG + chr8_3:9553712-9553731 None:intergenic 30.0%
TGAAACCGAATCATTAAGTT+TGG + chr8_3:9553713-9553732 None:intergenic 30.0%
!! AAACTTAATGATTCGGTTTC+AGG - chr8_3:9553712-9553731 Msa1275540:three_prime_UTR 30.0%
!! AGTTATTTTCCTTTTGGTTG+TGG - chr8_3:9553974-9553993 Msa1275540:CDS 30.0%
ACCAATGCTAATGACTTATA+TGG - chr8_3:9554266-9554285 Msa1275540:intron 30.0%
TCCATATAAGTCATTAGCAT+TGG + chr8_3:9554270-9554289 None:intergenic 30.0%
TGTTTAACTCAATGCATGTT+TGG - chr8_3:9554353-9554372 Msa1275540:intron 30.0%
! AAACATGCACGTAATGATTT+TGG - chr8_3:9554492-9554511 Msa1275540:intron 30.0%
!!! ATTTTGGTTCATTGCAAGTT+TGG - chr8_3:9554508-9554527 Msa1275540:intron 30.0%
!!! TTTTGGTTCATTGCAAGTTT+GGG - chr8_3:9554509-9554528 Msa1275540:intron 30.0%
GGTGAGATTGACATTTATAT+TGG + chr8_3:9554618-9554637 None:intergenic 30.0%
GTAGGATTTGAGTGTATATT+TGG + chr8_3:9554647-9554666 None:intergenic 30.0%
GAAAAGAACTTTCAGAAATG+AGG + chr8_3:9554814-9554833 None:intergenic 30.0%
!!! AGTTCTTTTCTTTTTGGTTG+TGG - chr8_3:9554824-9554843 Msa1275540:intron 30.0%
!!! GTTTTTTCTTTAATCAGGGT+TGG - chr8_3:9554984-9555003 Msa1275540:intron 30.0%
!! TCTGTATAAATTTTCGGGAT+TGG + chr8_3:9555184-9555203 None:intergenic 30.0%
! TTAATGCATGTTTGGATTAG+CGG - chr8_3:9555275-9555294 Msa1275540:intron 30.0%
TAAGTGCATGTTTGAATTGA+TGG + chr8_3:9555398-9555417 None:intergenic 30.0%
!! AGTTATTTTCCTTTTGGTTG+TGG - chr8_3:9553974-9553993 Msa1275540:CDS 30.0%
CTTTCTTGAAGTTTAGTATC+CGG - chr8_3:9555834-9555853 Msa1275540:intron 30.0%
TTCAAACCTAAGATCTATAG+AGG - chr8_3:9555977-9555996 Msa1275540:intron 30.0%
TCAAACCTAAGATCTATAGA+GGG - chr8_3:9555978-9555997 Msa1275540:intron 30.0%
GGATCAACGATACAAATTAT+TGG + chr8_3:9556075-9556094 None:intergenic 30.0%
TTCAGGTATACCTATAACTT+AGG - chr8_3:9556105-9556124 Msa1275540:intron 30.0%
TCATAGCATACCTAAGTTAT+AGG + chr8_3:9556118-9556137 None:intergenic 30.0%
TGTAATATGCTTGAGTTCAT+AGG + chr8_3:9556339-9556358 None:intergenic 30.0%
! ACCAATCCTAATGACTTTTA+TGG - chr8_3:9556379-9556398 Msa1275540:intron 30.0%
TCCATAAAAGTCATTAGGAT+TGG + chr8_3:9556383-9556402 None:intergenic 30.0%
TTGAGTGCATATTGGATTAA+CGG + chr8_3:9556720-9556739 None:intergenic 30.0%
TTAGTGTCAGATACTTTCTT+GGG + chr8_3:9557191-9557210 None:intergenic 30.0%
GCAAATCATAGTTATTAGCT+AGG - chr8_3:9557255-9557274 Msa1275540:intron 30.0%
TCAAGCTAAACATAAGTAAG+AGG + chr8_3:9557314-9557333 None:intergenic 30.0%
!!! AATCCTTTTGTTTTCAGCAA+AGG - chr8_3:9557582-9557601 Msa1275540:five_prime_UTR 30.0%
TTTCCTTTGCTGAAAACAAA+AGG + chr8_3:9557588-9557607 None:intergenic 30.0%
CAAAGGAAAAAATTACCCTT+TGG - chr8_3:9557599-9557618 Msa1275540:five_prime_UTR 30.0%
! TGATAATGAAACACTCCAAA+GGG + chr8_3:9557617-9557636 None:intergenic 30.0%
!! TTGATAATGAAACACTCCAA+AGG + chr8_3:9557618-9557637 None:intergenic 30.0%
! TGCGTTGTTGTTCCAAAAAA+AGG + chr8_3:9553607-9553626 None:intergenic 35.0%
CGTTGTTTGGATCAATTCAA+TGG - chr8_3:9553675-9553694 Msa1275540:three_prime_UTR 35.0%
GATCAATTCAATGGCAGAAA+AGG - chr8_3:9553684-9553703 Msa1275540:three_prime_UTR 35.0%
GGAACCCAAACTTAATGATT+CGG - chr8_3:9553705-9553724 Msa1275540:three_prime_UTR 35.0%
!!! TAAGCTATGGCTCTTGTTTT+TGG - chr8_3:9553916-9553935 Msa1275540:three_prime_UTR 35.0%
GTGCAGACAATTCTTATGTT+TGG + chr8_3:9554143-9554162 None:intergenic 35.0%
ACATAAGAATTGTCTGCACT+TGG - chr8_3:9554144-9554163 Msa1275540:CDS 35.0%
AGTTTATAGGTTCAAGGCTT+AGG + chr8_3:9554213-9554232 None:intergenic 35.0%
TGCATGAGTTTATAGGTTCA+AGG + chr8_3:9554219-9554238 None:intergenic 35.0%
!! AGCATTGGTCTATCATTAAG+AGG + chr8_3:9554255-9554274 None:intergenic 35.0%
TACGTGCATGTTTGTATTGA+TGG + chr8_3:9554485-9554504 None:intergenic 35.0%
TATCAACACGTTCTCTCTTT+CGG + chr8_3:9554720-9554739 None:intergenic 35.0%
!!! TCTTTTTGGTTGTGGCATTA+TGG - chr8_3:9554832-9554851 Msa1275540:intron 35.0%
TCTAGGTATACTCACAACTT+AGG - chr8_3:9554918-9554937 Msa1275540:intron 35.0%
! AAAGGAGTATAGTCGTATAG+AGG - chr8_3:9555102-9555121 Msa1275540:intron 35.0%
ATCCAAACATGCATTAACTC+AGG + chr8_3:9555272-9555291 None:intergenic 35.0%
ATGGTGAACTAACAAAGTCA+TGG + chr8_3:9555379-9555398 None:intergenic 35.0%
! TCTTTGGTTCATTGCAAGTT+TGG - chr8_3:9555426-9555445 Msa1275540:intron 35.0%
!! GTGGTTAGTCTGACAAATTA+CGG - chr8_3:9555453-9555472 Msa1275540:intron 35.0%
TTGCTTCAACAAAATCATGG+TGG + chr8_3:9555481-9555500 None:intergenic 35.0%
CACTTGCTTCAACAAAATCA+TGG + chr8_3:9555484-9555503 None:intergenic 35.0%
AATCAGTACAAATTCCTGAC+AGG - chr8_3:9555576-9555595 Msa1275540:intron 35.0%
!! TTGTTCTCTCTTTTGGAGAT+AGG + chr8_3:9555602-9555621 None:intergenic 35.0%
! TATCCAGTTGTTCTCTCTTT+TGG + chr8_3:9555609-9555628 None:intergenic 35.0%
TACATAAGACCACAACCAAA+AGG + chr8_3:9555791-9555810 None:intergenic 35.0%
!!! TTTTGGTTGTGGTCTTATGT+AGG - chr8_3:9555790-9555809 Msa1275540:intron 35.0%
TAGGAATTGTTTGCACTTGA+CGG - chr8_3:9555952-9555971 Msa1275540:intron 35.0%
CAAACCTAAGATCTATAGAG+GGG - chr8_3:9555979-9555998 Msa1275540:intron 35.0%
AACAAACATCTCAACCATCT+GGG + chr8_3:9556043-9556062 None:intergenic 35.0%
AAACAAACATCTCAACCATC+TGG + chr8_3:9556044-9556063 None:intergenic 35.0%
!! AAGCATGGTGTTATAAGAGT+TGG + chr8_3:9556245-9556264 None:intergenic 35.0%
TTGTATTGAAAGGGATATGG+AGG - chr8_3:9556274-9556293 Msa1275540:intron 35.0%
TGCATTAAGTCAAGCAACTT+AGG + chr8_3:9556462-9556481 None:intergenic 35.0%
TGCTTGACTTAATGCATGTT+TGG - chr8_3:9556466-9556485 Msa1275540:intron 35.0%
! TCTTTGGTTCATTGCAAGTT+TGG - chr8_3:9555426-9555445 Msa1275540:intron 35.0%
TCATTGCAAGTTTGGATTGT+TGG - chr8_3:9556624-9556643 Msa1275540:intron 35.0%
! TGGCGAGTTTGACAATTTTA+CGG - chr8_3:9556644-9556663 Msa1275540:intron 35.0%
TATTGGATTAACGGTGAGTT+TGG + chr8_3:9556711-9556730 None:intergenic 35.0%
TATCCACATGTTCTCTCTTT+CGG + chr8_3:9556792-9556811 None:intergenic 35.0%
TTCCATGAGTTTCTTTGTCA+TGG + chr8_3:9557064-9557083 None:intergenic 35.0%
ATGACAAAGAAACTCATGGA+AGG - chr8_3:9557063-9557082 Msa1275540:intron 35.0%
AAGGAATGATGACATTGATG+AGG - chr8_3:9557082-9557101 Msa1275540:intron 35.0%
AGGAATGATGACATTGATGA+GGG - chr8_3:9557083-9557102 Msa1275540:intron 35.0%
TAGTGTCAGATACTTTCTTG+GGG + chr8_3:9557190-9557209 None:intergenic 35.0%
CTTAGTGTCAGATACTTTCT+TGG + chr8_3:9557192-9557211 None:intergenic 35.0%
!! CAAGAAAGTATCTGACACTA+AGG - chr8_3:9557190-9557209 Msa1275540:intron 35.0%
AACAGCTATGATCACTTTGA+TGG + chr8_3:9557221-9557240 None:intergenic 35.0%
!! GTTTAGCTTGACGATGAATT+TGG - chr8_3:9557323-9557342 Msa1275540:intron 35.0%
GGTGTAATTTAACCAAACCA+TGG + chr8_3:9557420-9557439 None:intergenic 35.0%
! ATTAACACTGTTGAGAGCAT+TGG + chr8_3:9557449-9557468 None:intergenic 35.0%
CTATACTACTATGTTTGCCT+TGG - chr8_3:9557477-9557496 Msa1275540:CDS 35.0%
ACAGAAACAAAAAACAGCCA+AGG + chr8_3:9557497-9557516 None:intergenic 35.0%
GTTGATGTTCCCTTTAGATA+TGG - chr8_3:9557515-9557534 Msa1275540:five_prime_UTR 35.0%
! TGCGTTGTTGTTCCAAAAAA+AGG + chr8_3:9553607-9553626 None:intergenic 35.0%
CGTTGTTTGGATCAATTCAA+TGG - chr8_3:9553675-9553694 Msa1275540:three_prime_UTR 35.0%
GATCAATTCAATGGCAGAAA+AGG - chr8_3:9553684-9553703 Msa1275540:three_prime_UTR 35.0%
GGAACCCAAACTTAATGATT+CGG - chr8_3:9553705-9553724 Msa1275540:three_prime_UTR 35.0%
!!! TAAGCTATGGCTCTTGTTTT+TGG - chr8_3:9553916-9553935 Msa1275540:three_prime_UTR 35.0%
GTGCAGACAATTCTTATGTT+TGG + chr8_3:9554143-9554162 None:intergenic 35.0%
ACATAAGAATTGTCTGCACT+TGG - chr8_3:9554144-9554163 Msa1275540:CDS 35.0%
AGTTTATAGGTTCAAGGCTT+AGG + chr8_3:9554213-9554232 None:intergenic 35.0%
TGCATGAGTTTATAGGTTCA+AGG + chr8_3:9554219-9554238 None:intergenic 35.0%
!! AGCATTGGTCTATCATTAAG+AGG + chr8_3:9554255-9554274 None:intergenic 35.0%
TACGTGCATGTTTGTATTGA+TGG + chr8_3:9554485-9554504 None:intergenic 35.0%
TATCAACACGTTCTCTCTTT+CGG + chr8_3:9554720-9554739 None:intergenic 35.0%
!!! TCTTTTTGGTTGTGGCATTA+TGG - chr8_3:9554832-9554851 Msa1275540:intron 35.0%
TCTAGGTATACTCACAACTT+AGG - chr8_3:9554918-9554937 Msa1275540:intron 35.0%
! AAAGGAGTATAGTCGTATAG+AGG - chr8_3:9555102-9555121 Msa1275540:intron 35.0%
ATCCAAACATGCATTAACTC+AGG + chr8_3:9555272-9555291 None:intergenic 35.0%
ATGGTGAACTAACAAAGTCA+TGG + chr8_3:9555379-9555398 None:intergenic 35.0%
! TCTTTGGTTCATTGCAAGTT+TGG - chr8_3:9555426-9555445 Msa1275540:intron 35.0%
!! GTGGTTAGTCTGACAAATTA+CGG - chr8_3:9555453-9555472 Msa1275540:intron 35.0%
TTGCTTCAACAAAATCATGG+TGG + chr8_3:9555481-9555500 None:intergenic 35.0%
CACTTGCTTCAACAAAATCA+TGG + chr8_3:9555484-9555503 None:intergenic 35.0%
AATCAGTACAAATTCCTGAC+AGG - chr8_3:9555576-9555595 Msa1275540:intron 35.0%
!! TTGTTCTCTCTTTTGGAGAT+AGG + chr8_3:9555602-9555621 None:intergenic 35.0%
! TATCCAGTTGTTCTCTCTTT+TGG + chr8_3:9555609-9555628 None:intergenic 35.0%
TACATAAGACCACAACCAAA+AGG + chr8_3:9555791-9555810 None:intergenic 35.0%
!!! TTTTGGTTGTGGTCTTATGT+AGG - chr8_3:9555790-9555809 Msa1275540:intron 35.0%
TAGGAATTGTTTGCACTTGA+CGG - chr8_3:9555952-9555971 Msa1275540:intron 35.0%
CAAACCTAAGATCTATAGAG+GGG - chr8_3:9555979-9555998 Msa1275540:intron 35.0%
AACAAACATCTCAACCATCT+GGG + chr8_3:9556043-9556062 None:intergenic 35.0%
AAACAAACATCTCAACCATC+TGG + chr8_3:9556044-9556063 None:intergenic 35.0%
!! AAGCATGGTGTTATAAGAGT+TGG + chr8_3:9556245-9556264 None:intergenic 35.0%
TTGTATTGAAAGGGATATGG+AGG - chr8_3:9556274-9556293 Msa1275540:intron 35.0%
TGCATTAAGTCAAGCAACTT+AGG + chr8_3:9556462-9556481 None:intergenic 35.0%
TGCTTGACTTAATGCATGTT+TGG - chr8_3:9556466-9556485 Msa1275540:intron 35.0%
! TCTTTGGTTCATTGCAAGTT+TGG - chr8_3:9555426-9555445 Msa1275540:intron 35.0%
TCATTGCAAGTTTGGATTGT+TGG - chr8_3:9556624-9556643 Msa1275540:intron 35.0%
! TGGCGAGTTTGACAATTTTA+CGG - chr8_3:9556644-9556663 Msa1275540:intron 35.0%
TATTGGATTAACGGTGAGTT+TGG + chr8_3:9556711-9556730 None:intergenic 35.0%
TATCCACATGTTCTCTCTTT+CGG + chr8_3:9556792-9556811 None:intergenic 35.0%
TTCCATGAGTTTCTTTGTCA+TGG + chr8_3:9557064-9557083 None:intergenic 35.0%
ATGACAAAGAAACTCATGGA+AGG - chr8_3:9557063-9557082 Msa1275540:intron 35.0%
AAGGAATGATGACATTGATG+AGG - chr8_3:9557082-9557101 Msa1275540:intron 35.0%
AGGAATGATGACATTGATGA+GGG - chr8_3:9557083-9557102 Msa1275540:intron 35.0%
TAGTGTCAGATACTTTCTTG+GGG + chr8_3:9557190-9557209 None:intergenic 35.0%
CTTAGTGTCAGATACTTTCT+TGG + chr8_3:9557192-9557211 None:intergenic 35.0%
!! CAAGAAAGTATCTGACACTA+AGG - chr8_3:9557190-9557209 Msa1275540:intron 35.0%
AACAGCTATGATCACTTTGA+TGG + chr8_3:9557221-9557240 None:intergenic 35.0%
!! GTTTAGCTTGACGATGAATT+TGG - chr8_3:9557323-9557342 Msa1275540:intron 35.0%
GGTGTAATTTAACCAAACCA+TGG + chr8_3:9557420-9557439 None:intergenic 35.0%
! ATTAACACTGTTGAGAGCAT+TGG + chr8_3:9557449-9557468 None:intergenic 35.0%
CTATACTACTATGTTTGCCT+TGG - chr8_3:9557477-9557496 Msa1275540:CDS 35.0%
ACAGAAACAAAAAACAGCCA+AGG + chr8_3:9557497-9557516 None:intergenic 35.0%
GTTGATGTTCCCTTTAGATA+TGG - chr8_3:9557515-9557534 Msa1275540:five_prime_UTR 35.0%
! CCAAACAACGTTTGAGTTTG+AGG + chr8_3:9553665-9553684 None:intergenic 40.0%
CCTCAAACTCAAACGTTGTT+TGG - chr8_3:9553662-9553681 Msa1275540:three_prime_UTR 40.0%
CGGGTGTATAATCTAAGCTA+TGG - chr8_3:9553903-9553922 Msa1275540:three_prime_UTR 40.0%
!! TCCTTTTGGTTGTGGTCTTA+TGG - chr8_3:9553982-9554001 Msa1275540:CDS 40.0%
TCCATAAGACCACAACCAAA+AGG + chr8_3:9553986-9554005 None:intergenic 40.0%
!!! GATTGGTTTTCCGGATTAGT+CGG + chr8_3:9554063-9554082 None:intergenic 40.0%
AGTCAGAGTAAAGCTCTGTA+TGG - chr8_3:9554112-9554131 Msa1275540:CDS 40.0%
TTCAAACCTGAGATGTAGAG+AGG - chr8_3:9554172-9554191 Msa1275540:CDS 40.0%
! TTGTACCTTTTCCTAACTCG+AGG - chr8_3:9554588-9554607 Msa1275540:intron 40.0%
ATCCTGTGAAGCAGATGAAT+CGG - chr8_3:9554671-9554690 Msa1275540:intron 40.0%
! CTATTTGTGGCTCTTGTTTC+TGG - chr8_3:9554766-9554785 Msa1275540:intron 40.0%
!! TTTTGGTTGTGGCATTATGG+AGG - chr8_3:9554835-9554854 Msa1275540:intron 40.0%
ATTAGGATCTTTGACCCACT+AGG - chr8_3:9554892-9554911 Msa1275540:intron 40.0%
TTCATGAATTAGCCCCATAG+CGG + chr8_3:9554945-9554964 None:intergenic 40.0%
ATGGGGCTAATTCATGAACT+TGG - chr8_3:9554947-9554966 Msa1275540:intron 40.0%
TAATTCATGAACTTGGCAGC+AGG - chr8_3:9554954-9554973 Msa1275540:intron 40.0%
TGCATTAACTCAGGCAACTT+AGG + chr8_3:9555263-9555282 None:intergenic 40.0%
TGCCTGAGTTAATGCATGTT+TGG - chr8_3:9555267-9555286 Msa1275540:intron 40.0%
TCAAACATGCACTTAGTGTG+AGG - chr8_3:9555403-9555422 Msa1275540:intron 40.0%
GGTTCATTGCAAGTTTGGAT+TGG - chr8_3:9555431-9555450 Msa1275540:intron 40.0%
! TCATTGCAAGTTTGGATTGG+TGG - chr8_3:9555434-9555453 Msa1275540:intron 40.0%
!! CTGATTCATCTGCTTTTCAC+AGG + chr8_3:9555562-9555581 None:intergenic 40.0%
TCTCCAAAAGAGAGAACAAC+TGG - chr8_3:9555603-9555622 Msa1275540:intron 40.0%
!!! GATTGGTTTTCCGGATTAGT+CGG + chr8_3:9554063-9554082 None:intergenic 40.0%
TGTATGGACCGATCAAACAT+AGG - chr8_3:9555933-9555952 Msa1275540:intron 40.0%
TGTACCCCTCTATAGATCTT+AGG + chr8_3:9555986-9556005 None:intergenic 40.0%
ACAAACATCTCAACCATCTG+GGG + chr8_3:9556042-9556061 None:intergenic 40.0%
CCTAATTCTCGAATTAGCAG+CGG - chr8_3:9556139-9556158 Msa1275540:intron 40.0%
! GAGTTGGAGTACTTTCCAAA+TGG - chr8_3:9556186-9556205 Msa1275540:intron 40.0%
CTTGTTAGGAGTTGTCCATT+TGG + chr8_3:9556204-9556223 None:intergenic 40.0%
! ATGACGTTACAAGGCTTGTT+AGG + chr8_3:9556218-9556237 None:intergenic 40.0%
CTCACACTAAGTGCATTTGA+TGG + chr8_3:9556595-9556614 None:intergenic 40.0%
CATCAAATGCACTTAGTGTG+AGG - chr8_3:9556593-9556612 Msa1275540:intron 40.0%
GAGCTTCAACAAAATCGTAG+TGG + chr8_3:9556672-9556691 None:intergenic 40.0%
CACAGGATTTGAGTGCATAT+TGG + chr8_3:9556728-9556747 None:intergenic 40.0%
AAGCTCCAAACATTCTTGAG+AGG - chr8_3:9556991-9557010 Msa1275540:intron 40.0%
AGCTCCAAACATTCTTGAGA+GGG - chr8_3:9556992-9557011 Msa1275540:intron 40.0%
TTAGCCCTCTCAAGAATGTT+TGG + chr8_3:9556999-9557018 None:intergenic 40.0%
AAACATTCTTGAGAGGGCTA+AGG - chr8_3:9556998-9557017 Msa1275540:intron 40.0%
AGATACTTTCTTGGGGAGAA+TGG + chr8_3:9557183-9557202 None:intergenic 40.0%
ATAAAATCGCCATGCTACCA+TGG - chr8_3:9557400-9557419 Msa1275540:intron 40.0%
TTAACCAAACCATGGTAGCA+TGG + chr8_3:9557412-9557431 None:intergenic 40.0%
!! TGTTGAGAGCATTGGAATCT+CGG + chr8_3:9557441-9557460 None:intergenic 40.0%
! CCAAACAACGTTTGAGTTTG+AGG + chr8_3:9553665-9553684 None:intergenic 40.0%
CCTCAAACTCAAACGTTGTT+TGG - chr8_3:9553662-9553681 Msa1275540:three_prime_UTR 40.0%
CGGGTGTATAATCTAAGCTA+TGG - chr8_3:9553903-9553922 Msa1275540:three_prime_UTR 40.0%
!! TCCTTTTGGTTGTGGTCTTA+TGG - chr8_3:9553982-9554001 Msa1275540:CDS 40.0%
TCCATAAGACCACAACCAAA+AGG + chr8_3:9553986-9554005 None:intergenic 40.0%
!!! GATTGGTTTTCCGGATTAGT+CGG + chr8_3:9554063-9554082 None:intergenic 40.0%
AGTCAGAGTAAAGCTCTGTA+TGG - chr8_3:9554112-9554131 Msa1275540:CDS 40.0%
TTCAAACCTGAGATGTAGAG+AGG - chr8_3:9554172-9554191 Msa1275540:CDS 40.0%
! TTGTACCTTTTCCTAACTCG+AGG - chr8_3:9554588-9554607 Msa1275540:intron 40.0%
ATCCTGTGAAGCAGATGAAT+CGG - chr8_3:9554671-9554690 Msa1275540:intron 40.0%
! CTATTTGTGGCTCTTGTTTC+TGG - chr8_3:9554766-9554785 Msa1275540:intron 40.0%
!! TTTTGGTTGTGGCATTATGG+AGG - chr8_3:9554835-9554854 Msa1275540:intron 40.0%
ATTAGGATCTTTGACCCACT+AGG - chr8_3:9554892-9554911 Msa1275540:intron 40.0%
TTCATGAATTAGCCCCATAG+CGG + chr8_3:9554945-9554964 None:intergenic 40.0%
ATGGGGCTAATTCATGAACT+TGG - chr8_3:9554947-9554966 Msa1275540:intron 40.0%
TAATTCATGAACTTGGCAGC+AGG - chr8_3:9554954-9554973 Msa1275540:intron 40.0%
TGCATTAACTCAGGCAACTT+AGG + chr8_3:9555263-9555282 None:intergenic 40.0%
TGCCTGAGTTAATGCATGTT+TGG - chr8_3:9555267-9555286 Msa1275540:intron 40.0%
TCAAACATGCACTTAGTGTG+AGG - chr8_3:9555403-9555422 Msa1275540:intron 40.0%
GGTTCATTGCAAGTTTGGAT+TGG - chr8_3:9555431-9555450 Msa1275540:intron 40.0%
! TCATTGCAAGTTTGGATTGG+TGG - chr8_3:9555434-9555453 Msa1275540:intron 40.0%
!! CTGATTCATCTGCTTTTCAC+AGG + chr8_3:9555562-9555581 None:intergenic 40.0%
TCTCCAAAAGAGAGAACAAC+TGG - chr8_3:9555603-9555622 Msa1275540:intron 40.0%
!!! GATTGGTTTTCCGGATTAGT+CGG + chr8_3:9554063-9554082 None:intergenic 40.0%
TGTATGGACCGATCAAACAT+AGG - chr8_3:9555933-9555952 Msa1275540:intron 40.0%
TGTACCCCTCTATAGATCTT+AGG + chr8_3:9555986-9556005 None:intergenic 40.0%
ACAAACATCTCAACCATCTG+GGG + chr8_3:9556042-9556061 None:intergenic 40.0%
CCTAATTCTCGAATTAGCAG+CGG - chr8_3:9556139-9556158 Msa1275540:intron 40.0%
! GAGTTGGAGTACTTTCCAAA+TGG - chr8_3:9556186-9556205 Msa1275540:intron 40.0%
CTTGTTAGGAGTTGTCCATT+TGG + chr8_3:9556204-9556223 None:intergenic 40.0%
! ATGACGTTACAAGGCTTGTT+AGG + chr8_3:9556218-9556237 None:intergenic 40.0%
CTCACACTAAGTGCATTTGA+TGG + chr8_3:9556595-9556614 None:intergenic 40.0%
CATCAAATGCACTTAGTGTG+AGG - chr8_3:9556593-9556612 Msa1275540:intron 40.0%
GAGCTTCAACAAAATCGTAG+TGG + chr8_3:9556672-9556691 None:intergenic 40.0%
CACAGGATTTGAGTGCATAT+TGG + chr8_3:9556728-9556747 None:intergenic 40.0%
AAGCTCCAAACATTCTTGAG+AGG - chr8_3:9556991-9557010 Msa1275540:intron 40.0%
AGCTCCAAACATTCTTGAGA+GGG - chr8_3:9556992-9557011 Msa1275540:intron 40.0%
TTAGCCCTCTCAAGAATGTT+TGG + chr8_3:9556999-9557018 None:intergenic 40.0%
AAACATTCTTGAGAGGGCTA+AGG - chr8_3:9556998-9557017 Msa1275540:intron 40.0%
AGATACTTTCTTGGGGAGAA+TGG + chr8_3:9557183-9557202 None:intergenic 40.0%
ATAAAATCGCCATGCTACCA+TGG - chr8_3:9557400-9557419 Msa1275540:intron 40.0%
TTAACCAAACCATGGTAGCA+TGG + chr8_3:9557412-9557431 None:intergenic 40.0%
!! TGTTGAGAGCATTGGAATCT+CGG + chr8_3:9557441-9557460 None:intergenic 40.0%
!!! TAGACGGTGGATTGGTTTTC+CGG + chr8_3:9554072-9554091 None:intergenic 45.0%
AAGAATTGTCTGCACTTGGC+AGG - chr8_3:9554148-9554167 Msa1275540:CDS 45.0%
GGTTCATTGCAAGTTTGGGT+TGG - chr8_3:9554513-9554532 Msa1275540:intron 45.0%
!! TCATTGCAAGTTTGGGTTGG+TGG - chr8_3:9554516-9554535 Msa1275540:intron 45.0%
! TACCTTTTCCTAACTCGAGG+TGG - chr8_3:9554591-9554610 Msa1275540:intron 45.0%
CTGCTTCACAGGATTTGTGT+AGG + chr8_3:9554665-9554684 None:intergenic 45.0%
!! TACCGATTCATCTGCTTCAC+AGG + chr8_3:9554676-9554695 None:intergenic 45.0%
GAATCGGTACAAACTTCCGA+CGG - chr8_3:9554687-9554706 Msa1275540:intron 45.0%
! GTATACCTAGAGTGCCTAGT+GGG + chr8_3:9554909-9554928 None:intergenic 45.0%
! AGTATACCTAGAGTGCCTAG+TGG + chr8_3:9554910-9554929 None:intergenic 45.0%
TCACAACTTAGGTCCGCTAT+GGG - chr8_3:9554929-9554948 Msa1275540:intron 45.0%
! CAACACGGTGTTAGAAGAGT+TGG + chr8_3:9555039-9555058 None:intergenic 45.0%
CAACTCTTCTAACACCGTGT+TGG - chr8_3:9555037-9555056 Msa1275540:intron 45.0%
TGCACTTAGTGTGAGGTCTT+TGG - chr8_3:9555410-9555429 Msa1275540:intron 45.0%
!! GTGGTCTTATGTAGGAGACA+TGG - chr8_3:9555798-9555817 Msa1275540:intron 45.0%
!! TTTCCGGATTAGTCGGTCTT+AGG + chr8_3:9555861-9555880 None:intergenic 45.0%
TCAATTGAGCCTACCACTAC+TGG + chr8_3:9555897-9555916 None:intergenic 45.0%
AGTCGTAGCAAAGCTCTGTA+TGG - chr8_3:9555917-9555936 Msa1275540:intron 45.0%
TTGATCCAAGCAGACGATTC+AGG - chr8_3:9556088-9556107 Msa1275540:intron 45.0%
GTATACCTGAATCGTCTGCT+TGG + chr8_3:9556096-9556115 None:intergenic 45.0%
CCGCTGCTAATTCGAGAATT+AGG + chr8_3:9556142-9556161 None:intergenic 45.0%
GTTGGCAACATGACGTTACA+AGG + chr8_3:9556227-9556246 None:intergenic 45.0%
!! AGGATTGGTCTAGTGCTTAG+AGG + chr8_3:9556368-9556387 None:intergenic 45.0%
TGCACTTAGTGTGAGGTCTT+TGG - chr8_3:9555410-9555429 Msa1275540:intron 45.0%
CTGATTCATCTGCTTGTCAC+AGG + chr8_3:9556745-9556764 None:intergenic 45.0%
TCTTTCGGAGATAGACCTGT+CGG + chr8_3:9556777-9556796 None:intergenic 45.0%
TCTCCGAAAGAGAGAACATG+TGG - chr8_3:9556786-9556805 Msa1275540:intron 45.0%
TGAGTTTCTTTGTCATGGCG+AGG + chr8_3:9557059-9557078 None:intergenic 45.0%
CGCCATGACAAAGAAACTCA+TGG - chr8_3:9557059-9557078 Msa1275540:intron 45.0%
GTTGAAGAAGTCAAAGCTCC+CGG - chr8_3:9557113-9557132 Msa1275540:intron 45.0%
TTCACCCTTTCAAACACACC+GGG + chr8_3:9557134-9557153 None:intergenic 45.0%
CTTCACCCTTTCAAACACAC+CGG + chr8_3:9557135-9557154 None:intergenic 45.0%
AGAGCTTGAAGCTGTAGTTG+AGG - chr8_3:9557157-9557176 Msa1275540:intron 45.0%
!!! TAGACGGTGGATTGGTTTTC+CGG + chr8_3:9554072-9554091 None:intergenic 45.0%
AAGAATTGTCTGCACTTGGC+AGG - chr8_3:9554148-9554167 Msa1275540:CDS 45.0%
GGTTCATTGCAAGTTTGGGT+TGG - chr8_3:9554513-9554532 Msa1275540:intron 45.0%
!! TCATTGCAAGTTTGGGTTGG+TGG - chr8_3:9554516-9554535 Msa1275540:intron 45.0%
! TACCTTTTCCTAACTCGAGG+TGG - chr8_3:9554591-9554610 Msa1275540:intron 45.0%
CTGCTTCACAGGATTTGTGT+AGG + chr8_3:9554665-9554684 None:intergenic 45.0%
!! TACCGATTCATCTGCTTCAC+AGG + chr8_3:9554676-9554695 None:intergenic 45.0%
GAATCGGTACAAACTTCCGA+CGG - chr8_3:9554687-9554706 Msa1275540:intron 45.0%
! GTATACCTAGAGTGCCTAGT+GGG + chr8_3:9554909-9554928 None:intergenic 45.0%
! AGTATACCTAGAGTGCCTAG+TGG + chr8_3:9554910-9554929 None:intergenic 45.0%
TCACAACTTAGGTCCGCTAT+GGG - chr8_3:9554929-9554948 Msa1275540:intron 45.0%
! CAACACGGTGTTAGAAGAGT+TGG + chr8_3:9555039-9555058 None:intergenic 45.0%
CAACTCTTCTAACACCGTGT+TGG - chr8_3:9555037-9555056 Msa1275540:intron 45.0%
TGCACTTAGTGTGAGGTCTT+TGG - chr8_3:9555410-9555429 Msa1275540:intron 45.0%
!! GTGGTCTTATGTAGGAGACA+TGG - chr8_3:9555798-9555817 Msa1275540:intron 45.0%
!! TTTCCGGATTAGTCGGTCTT+AGG + chr8_3:9555861-9555880 None:intergenic 45.0%
TCAATTGAGCCTACCACTAC+TGG + chr8_3:9555897-9555916 None:intergenic 45.0%
AGTCGTAGCAAAGCTCTGTA+TGG - chr8_3:9555917-9555936 Msa1275540:intron 45.0%
TTGATCCAAGCAGACGATTC+AGG - chr8_3:9556088-9556107 Msa1275540:intron 45.0%
GTATACCTGAATCGTCTGCT+TGG + chr8_3:9556096-9556115 None:intergenic 45.0%
CCGCTGCTAATTCGAGAATT+AGG + chr8_3:9556142-9556161 None:intergenic 45.0%
GTTGGCAACATGACGTTACA+AGG + chr8_3:9556227-9556246 None:intergenic 45.0%
!! AGGATTGGTCTAGTGCTTAG+AGG + chr8_3:9556368-9556387 None:intergenic 45.0%
TGCACTTAGTGTGAGGTCTT+TGG - chr8_3:9555410-9555429 Msa1275540:intron 45.0%
CTGATTCATCTGCTTGTCAC+AGG + chr8_3:9556745-9556764 None:intergenic 45.0%
TCTTTCGGAGATAGACCTGT+CGG + chr8_3:9556777-9556796 None:intergenic 45.0%
TCTCCGAAAGAGAGAACATG+TGG - chr8_3:9556786-9556805 Msa1275540:intron 45.0%
TGAGTTTCTTTGTCATGGCG+AGG + chr8_3:9557059-9557078 None:intergenic 45.0%
CGCCATGACAAAGAAACTCA+TGG - chr8_3:9557059-9557078 Msa1275540:intron 45.0%
GTTGAAGAAGTCAAAGCTCC+CGG - chr8_3:9557113-9557132 Msa1275540:intron 45.0%
TTCACCCTTTCAAACACACC+GGG + chr8_3:9557134-9557153 None:intergenic 45.0%
CTTCACCCTTTCAAACACAC+CGG + chr8_3:9557135-9557154 None:intergenic 45.0%
AGAGCTTGAAGCTGTAGTTG+AGG - chr8_3:9557157-9557176 Msa1275540:intron 45.0%
GAAGCTCAATATCCGGTCCT+TGG - chr8_3:9554036-9554055 Msa1275540:CDS 50.0%
!! TTTCCGGATTAGTCGGTCCA+AGG + chr8_3:9554056-9554075 None:intergenic 50.0%
ACCAATCCACCGTCTACTAG+CGG - chr8_3:9554076-9554095 Msa1275540:CDS 50.0%
TTGAACCTCCCGCTAGTAGA+CGG + chr8_3:9554088-9554107 None:intergenic 50.0%
TGTGCTCCTCTCTACATCTC+AGG + chr8_3:9554181-9554200 None:intergenic 50.0%
! GTAGAGAGGAGCACACTCTT+AGG - chr8_3:9554186-9554205 Msa1275540:CDS 50.0%
ATATTGGGCCACCTCGAGTT+AGG + chr8_3:9554602-9554621 None:intergenic 50.0%
CTCTTTCGGAGATAGACCGT+CGG + chr8_3:9554706-9554725 None:intergenic 50.0%
GTGGCATTATGGAGGAGTCA+TGG - chr8_3:9554843-9554862 Msa1275540:intron 50.0%
TTTGACCCACTAGGCACTCT+AGG - chr8_3:9554901-9554920 Msa1275540:intron 50.0%
CTCACAACTTAGGTCCGCTA+TGG - chr8_3:9554928-9554947 Msa1275540:intron 50.0%
CACAACTTAGGTCCGCTATG+GGG - chr8_3:9554930-9554949 Msa1275540:intron 50.0%
ATCAGGGTTGGACTCCTAAC+AGG - chr8_3:9554996-9555015 Msa1275540:intron 50.0%
GTTGGACTCCTAACAGGCTT+GGG - chr8_3:9555002-9555021 Msa1275540:intron 50.0%
CATGACTTCCCAAGCCTGTT+AGG + chr8_3:9555013-9555032 None:intergenic 50.0%
!! CTTTTGGAGATAGGCCTGTC+AGG + chr8_3:9555593-9555612 None:intergenic 50.0%
!! GGATTAGTCGGTCTTAGGAC+CGG + chr8_3:9555856-9555875 None:intergenic 50.0%
GGTCCTAAGACCGACTAATC+CGG - chr8_3:9555855-9555874 Msa1275540:intron 50.0%
!!! TGGACGGTGGATTGGTTTTC+CGG + chr8_3:9555877-9555896 None:intergenic 50.0%
TTGAGCCTACCACTACTGGA+CGG + chr8_3:9555893-9555912 None:intergenic 50.0%
! CTATAGAGGGGTACACTCCT+AGG - chr8_3:9555991-9556010 Msa1275540:intron 50.0%
! ACATCTCAACCATCTGGGGT+TGG + chr8_3:9556038-9556057 None:intergenic 50.0%
AATCAGTACCAACTCCCGAC+AGG - chr8_3:9556759-9556778 Msa1275540:intron 50.0%
CTTTCGGAGATAGACCTGTC+GGG + chr8_3:9556776-9556795 None:intergenic 50.0%
CATTCTTGAGAGGGCTAAGG+AGG - chr8_3:9557001-9557020 Msa1275540:intron 50.0%
AAGCTCCCGGTGTGTTTGAA+AGG - chr8_3:9557126-9557145 Msa1275540:intron 50.0%
AGCTCCCGGTGTGTTTGAAA+GGG - chr8_3:9557127-9557146 Msa1275540:intron 50.0%
CGGTGTGTTTGAAAGGGTGA+AGG - chr8_3:9557133-9557152 Msa1275540:intron 50.0%
ATCGCCATGCTACCATGGTT+TGG - chr8_3:9557405-9557424 Msa1275540:intron 50.0%
GAAGCTCAATATCCGGTCCT+TGG - chr8_3:9554036-9554055 Msa1275540:CDS 50.0%
!! TTTCCGGATTAGTCGGTCCA+AGG + chr8_3:9554056-9554075 None:intergenic 50.0%
ACCAATCCACCGTCTACTAG+CGG - chr8_3:9554076-9554095 Msa1275540:CDS 50.0%
TTGAACCTCCCGCTAGTAGA+CGG + chr8_3:9554088-9554107 None:intergenic 50.0%
TGTGCTCCTCTCTACATCTC+AGG + chr8_3:9554181-9554200 None:intergenic 50.0%
! GTAGAGAGGAGCACACTCTT+AGG - chr8_3:9554186-9554205 Msa1275540:CDS 50.0%
ATATTGGGCCACCTCGAGTT+AGG + chr8_3:9554602-9554621 None:intergenic 50.0%
CTCTTTCGGAGATAGACCGT+CGG + chr8_3:9554706-9554725 None:intergenic 50.0%
GTGGCATTATGGAGGAGTCA+TGG - chr8_3:9554843-9554862 Msa1275540:intron 50.0%
TTTGACCCACTAGGCACTCT+AGG - chr8_3:9554901-9554920 Msa1275540:intron 50.0%
CTCACAACTTAGGTCCGCTA+TGG - chr8_3:9554928-9554947 Msa1275540:intron 50.0%
CACAACTTAGGTCCGCTATG+GGG - chr8_3:9554930-9554949 Msa1275540:intron 50.0%
ATCAGGGTTGGACTCCTAAC+AGG - chr8_3:9554996-9555015 Msa1275540:intron 50.0%
GTTGGACTCCTAACAGGCTT+GGG - chr8_3:9555002-9555021 Msa1275540:intron 50.0%
CATGACTTCCCAAGCCTGTT+AGG + chr8_3:9555013-9555032 None:intergenic 50.0%
!! CTTTTGGAGATAGGCCTGTC+AGG + chr8_3:9555593-9555612 None:intergenic 50.0%
!! GGATTAGTCGGTCTTAGGAC+CGG + chr8_3:9555856-9555875 None:intergenic 50.0%
GGTCCTAAGACCGACTAATC+CGG - chr8_3:9555855-9555874 Msa1275540:intron 50.0%
!!! TGGACGGTGGATTGGTTTTC+CGG + chr8_3:9555877-9555896 None:intergenic 50.0%
TTGAGCCTACCACTACTGGA+CGG + chr8_3:9555893-9555912 None:intergenic 50.0%
! CTATAGAGGGGTACACTCCT+AGG - chr8_3:9555991-9556010 Msa1275540:intron 50.0%
! ACATCTCAACCATCTGGGGT+TGG + chr8_3:9556038-9556057 None:intergenic 50.0%
AATCAGTACCAACTCCCGAC+AGG - chr8_3:9556759-9556778 Msa1275540:intron 50.0%
CTTTCGGAGATAGACCTGTC+GGG + chr8_3:9556776-9556795 None:intergenic 50.0%
CATTCTTGAGAGGGCTAAGG+AGG - chr8_3:9557001-9557020 Msa1275540:intron 50.0%
AAGCTCCCGGTGTGTTTGAA+AGG - chr8_3:9557126-9557145 Msa1275540:intron 50.0%
AGCTCCCGGTGTGTTTGAAA+GGG - chr8_3:9557127-9557146 Msa1275540:intron 50.0%
CGGTGTGTTTGAAAGGGTGA+AGG - chr8_3:9557133-9557152 Msa1275540:intron 50.0%
ATCGCCATGCTACCATGGTT+TGG - chr8_3:9557405-9557424 Msa1275540:intron 50.0%
!! GGATTAGTCGGTCCAAGGAC+CGG + chr8_3:9554051-9554070 None:intergenic 55.0%
GGTCCTTGGACCGACTAATC+CGG - chr8_3:9554050-9554069 Msa1275540:CDS 55.0%
CCAATCCACCGTCTACTAGC+GGG - chr8_3:9554077-9554096 Msa1275540:CDS 55.0%
GGCCACCTCGAGTTAGGAAA+AGG + chr8_3:9554596-9554615 None:intergenic 55.0%
GGTTGGACTCCTAACAGGCT+TGG - chr8_3:9555001-9555020 Msa1275540:intron 55.0%
!! GATTGGTCTCGTGCTGAGAG+AGG + chr8_3:9555167-9555186 None:intergenic 55.0%
ACCAATCCACCGTCCAGTAG+TGG - chr8_3:9555881-9555900 Msa1275540:intron 55.0%
ACCACTACTGGACGGTGGAT+TGG + chr8_3:9555885-9555904 None:intergenic 55.0%
ATCCACCGTCCAGTAGTGGT+AGG - chr8_3:9555885-9555904 Msa1275540:intron 55.0%
GAGGTGAAGGCTTAGGACCT+AGG + chr8_3:9556011-9556030 None:intergenic 55.0%
GAGATAGACCTGTCGGGAGT+TGG + chr8_3:9556770-9556789 None:intergenic 55.0%
!! GGATTAGTCGGTCCAAGGAC+CGG + chr8_3:9554051-9554070 None:intergenic 55.0%
GGTCCTTGGACCGACTAATC+CGG - chr8_3:9554050-9554069 Msa1275540:CDS 55.0%
CCAATCCACCGTCTACTAGC+GGG - chr8_3:9554077-9554096 Msa1275540:CDS 55.0%
GGCCACCTCGAGTTAGGAAA+AGG + chr8_3:9554596-9554615 None:intergenic 55.0%
GGTTGGACTCCTAACAGGCT+TGG - chr8_3:9555001-9555020 Msa1275540:intron 55.0%
!! GATTGGTCTCGTGCTGAGAG+AGG + chr8_3:9555167-9555186 None:intergenic 55.0%
ACCAATCCACCGTCCAGTAG+TGG - chr8_3:9555881-9555900 Msa1275540:intron 55.0%
ACCACTACTGGACGGTGGAT+TGG + chr8_3:9555885-9555904 None:intergenic 55.0%
ATCCACCGTCCAGTAGTGGT+AGG - chr8_3:9555885-9555904 Msa1275540:intron 55.0%
GAGGTGAAGGCTTAGGACCT+AGG + chr8_3:9556011-9556030 None:intergenic 55.0%
GAGATAGACCTGTCGGGAGT+TGG + chr8_3:9556770-9556789 None:intergenic 55.0%
CCCGCTAGTAGACGGTGGAT+TGG + chr8_3:9554080-9554099 None:intergenic 60.0%
ATCCACCGTCTACTAGCGGG+AGG - chr8_3:9554080-9554099 Msa1275540:CDS 60.0%
AACCTCCCGCTAGTAGACGG+TGG + chr8_3:9554085-9554104 None:intergenic 60.0%
AGCCTACCACTACTGGACGG+TGG + chr8_3:9555890-9555909 None:intergenic 60.0%
GGTCCTAAGCCTTCACCTCC+AGG - chr8_3:9556012-9556031 Msa1275540:intron 60.0%
TGGCCTGGAGGTGAAGGCTT+AGG + chr8_3:9556018-9556037 None:intergenic 60.0%
!! TCAACCATCTGGGGTTGGCC+TGG + chr8_3:9556033-9556052 None:intergenic 60.0%
GAGGGCTAAGGAGGAGACTG+AGG - chr8_3:9557010-9557029 Msa1275540:intron 60.0%
CCCGCTAGTAGACGGTGGAT+TGG + chr8_3:9554080-9554099 None:intergenic 60.0%
ATCCACCGTCTACTAGCGGG+AGG - chr8_3:9554080-9554099 Msa1275540:CDS 60.0%
AACCTCCCGCTAGTAGACGG+TGG + chr8_3:9554085-9554104 None:intergenic 60.0%
AGCCTACCACTACTGGACGG+TGG + chr8_3:9555890-9555909 None:intergenic 60.0%
GGTCCTAAGCCTTCACCTCC+AGG - chr8_3:9556012-9556031 Msa1275540:intron 60.0%
TGGCCTGGAGGTGAAGGCTT+AGG + chr8_3:9556018-9556037 None:intergenic 60.0%
!! TCAACCATCTGGGGTTGGCC+TGG + chr8_3:9556033-9556052 None:intergenic 60.0%
GAGGGCTAAGGAGGAGACTG+AGG - chr8_3:9557010-9557029 Msa1275540:intron 60.0%
!! TGGGGTTGGCCTGGAGGTGA+AGG + chr8_3:9556024-9556043 None:intergenic 65.0%
ACCTCCAGGCCAACCCCAGA+TGG - chr8_3:9556026-9556045 Msa1275540:intron 65.0%
!! ACCATCTGGGGTTGGCCTGG+AGG + chr8_3:9556030-9556049 None:intergenic 65.0%
!! TGGGGTTGGCCTGGAGGTGA+AGG + chr8_3:9556024-9556043 None:intergenic 65.0%
ACCTCCAGGCCAACCCCAGA+TGG - chr8_3:9556026-9556045 Msa1275540:intron 65.0%
!! ACCATCTGGGGTTGGCCTGG+AGG + chr8_3:9556030-9556049 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 9553550 9557650 9553550 ID=Msa1275540;Name=Msa1275540
chr8_3 mRNA 9553550 9557650 9553550 ID=Msa1275540-mRNA-1;Parent=Msa1275540;Name=Msa1275540-mRNA-1;_AED=0.02;_eAED=0.02;_QI=144|1|1|1|1|1|2|421|96
chr8_3 exon 9553550 9554221 9553550 ID=Msa1275540-mRNA-1:exon:4010;Parent=Msa1275540-mRNA-1
chr8_3 exon 9557467 9557650 9557467 ID=Msa1275540-mRNA-1:exon:4009;Parent=Msa1275540-mRNA-1
chr8_3 five_prime_UTR 9557507 9557650 9557507 ID=Msa1275540-mRNA-1:five_prime_utr;Parent=Msa1275540-mRNA-1
chr8_3 CDS 9557467 9557506 9557467 ID=Msa1275540-mRNA-1:cds;Parent=Msa1275540-mRNA-1
chr8_3 CDS 9553971 9554221 9553971 ID=Msa1275540-mRNA-1:cds;Parent=Msa1275540-mRNA-1
chr8_3 three_prime_UTR 9553550 9553970 9553550 ID=Msa1275540-mRNA-1:three_prime_utr;Parent=Msa1275540-mRNA-1
Gene Sequence

>Msa1275540

ATGGCAGAAAAGGAACCCAAACTTAATGATTCGGTTTCAGAAAAAGATGTGAAAGCTCCAAACATTCTTGAGAGGGCTAAGGAGGAGACTGAGGCAGTTTTTCATCATGACAAATCGCCTCGCCATGACAAAGAAACTCATGGAAGGAATGATGACATTGATGAGGGAACTTCTGTTGAAGAAGTCAAAGCTCCCGGTGTGTTTGAAAGGGTGAAGGAAGAGCTTGAAGCTGTAGTTGAGGCCATTCTCCCCAAGAAAGTATCTGACACTAAGGACTCTCCATCAAAGTGA
Protein sequence

>Msa1275540

MAEKEPKLNDSVSEKDVKAPNILERAKEETEAVFHHDKSPRHDKETHGRNDDIDEGTSVEEVKAPGVFERVKEELEAVVEAILPKKVSDTKDSPSK*