AlfalfaGEDB | Msa0488400

M. sativa cultivar zhongmu-4 / Msa0488400

KEGG: -
GO: -
PFAM: PF14966.9

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0488400	XP_013458796.1	95.610	205	8	1	1	205	1	204	3.52e-140	399

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0488400	A0A072UUU4	95.610	205	8	1	1	205	1	204	1.68e-140	399

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0004920	Msa0488400	0.800726	1.258983e-48	-8.615850e-47
Msa0015300	Msa0488400	0.821446	4.021272e-53	-8.615850e-47
Msa0017510	Msa0488400	0.813885	2.040719e-51	-8.615850e-47
Msa0044020	Msa0488400	0.804035	2.620518e-49	-8.615850e-47
Msa0046750	Msa0488400	0.813585	2.375660e-51	-8.615850e-47
Msa0051770	Msa0488400	0.812287	4.573456e-51	-8.615850e-47
Msa0053780	Msa0488400	0.812166	4.860527e-51	-8.615850e-47
Msa0076000	Msa0488400	0.824210	9.133491e-54	-8.615850e-47
Msa0077610	Msa0488400	0.808223	3.442304e-50	-8.615850e-47
Msa0110970	Msa0488400	0.812659	3.793673e-51	-8.615850e-47
Msa0140780	Msa0488400	0.828710	7.729196e-55	-8.615850e-47
Msa0148100	Msa0488400	0.803444	3.475924e-49	-8.615850e-47
Msa0157290	Msa0488400	0.813316	2.722012e-51	-8.615850e-47
Msa0173990	Msa0488400	0.801361	9.338478e-49	-8.615850e-47
Msa0184020	Msa0488400	0.807880	4.072200e-50	-8.615850e-47
Msa0184960	Msa0488400	0.977773	1.865462e-144	-8.615850e-47
Msa0186890	Msa0488400	0.800986	1.114188e-48	-8.615850e-47
Msa0188630	Msa0488400	0.805564	1.256213e-49	-8.615850e-47
Msa0189290	Msa0488400	0.818575	1.824857e-52	-8.615850e-47
Msa0191050	Msa0488400	0.814710	1.341240e-51	-8.615850e-47
Msa0195770	Msa0488400	0.817059	4.013191e-52	-8.615850e-47
Msa0200260	Msa0488400	0.800721	1.261925e-48	-8.615850e-47
Msa0205850	Msa0488400	0.817225	3.682065e-52	-8.615850e-47
Msa0220580	Msa0488400	0.812389	4.345800e-51	-8.615850e-47
Msa0225740	Msa0488400	0.802845	4.624097e-49	-8.615850e-47
Msa0231650	Msa0488400	0.822722	2.034230e-53	-8.615850e-47
Msa0233350	Msa0488400	0.818928	1.517437e-52	-8.615850e-47
Msa0366240	Msa0488400	0.816129	6.483013e-52	-8.615850e-47
Msa0372660	Msa0488400	0.806749	7.071305e-50	-8.615850e-47
Msa0373930	Msa0488400	0.800136	1.660705e-48	-8.615850e-47
Msa0379640	Msa0488400	0.803327	3.675573e-49	-8.615850e-47
Msa0380040	Msa0488400	0.806429	8.261759e-50	-8.615850e-47
Msa0380740	Msa0488400	0.800965	1.125270e-48	-8.615850e-47
Msa0389340	Msa0488400	0.813514	2.463188e-51	-8.615850e-47
Msa0398710	Msa0488400	0.801785	7.643044e-49	-8.615850e-47
Msa0398730	Msa0488400	0.800494	1.403987e-48	-8.615850e-47
Msa0402330	Msa0488400	0.804615	1.983759e-49	-8.615850e-47
Msa0419820	Msa0488400	0.805941	1.046894e-49	-8.615850e-47
Msa0425010	Msa0488400	0.813468	2.520833e-51	-8.615850e-47
Msa0432770	Msa0488400	0.805362	1.384740e-49	-8.615850e-47
Msa0442670	Msa0488400	0.974276	7.171412e-138	-8.615850e-47
Msa0480000	Msa0488400	0.801183	1.015338e-48	-8.615850e-47
Msa0243100	Msa0488400	0.832577	8.730197e-56	-8.615850e-47
Msa0243710	Msa0488400	0.805911	1.061840e-49	-8.615850e-47
Msa0246430	Msa0488400	0.802688	4.981467e-49	-8.615850e-47
Msa0258760	Msa0488400	0.814166	1.768890e-51	-8.615850e-47
Msa0265380	Msa0488400	0.804700	1.904924e-49	-8.615850e-47
Msa0270100	Msa0488400	0.807146	5.829669e-50	-8.615850e-47
Msa0270270	Msa0488400	0.807157	5.797538e-50	-8.615850e-47
Msa0275600	Msa0488400	0.821728	3.460887e-53	-8.615850e-47
Msa0282250	Msa0488400	0.831857	1.315624e-55	-8.615850e-47
Msa0287650	Msa0488400	0.841903	3.583122e-58	-8.615850e-47
Msa0296560	Msa0488400	0.801956	7.048651e-49	-8.615850e-47
Msa0311700	Msa0488400	0.805458	1.322064e-49	-8.615850e-47
Msa0311860	Msa0488400	0.800067	1.714939e-48	-8.615850e-47
Msa0323620	Msa0488400	0.807020	6.199162e-50	-8.615850e-47
Msa0334350	Msa0488400	0.802695	4.965628e-49	-8.615850e-47
Msa0342360	Msa0488400	0.966972	1.219561e-126	-8.615850e-47
Msa0355270	Msa0488400	0.810278	1.248079e-50	-8.615850e-47
Msa0484780	Msa0488400	0.807881	4.070770e-50	-8.615850e-47
Msa0488400	Msa0500360	0.805758	1.143898e-49	-8.615850e-47
Msa0488400	Msa0515010	0.805904	1.065731e-49	-8.615850e-47
Msa0488400	Msa0516320	0.812987	3.214865e-51	-8.615850e-47
Msa0488400	Msa0526890	0.804523	2.073326e-49	-8.615850e-47
Msa0488400	Msa0597330	0.805274	1.444995e-49	-8.615850e-47
Msa0488400	Msa0616020	0.825838	3.767909e-54	-8.615850e-47
Msa0488400	Msa0621590	0.827977	1.161057e-54	-8.615850e-47
Msa0488400	Msa0638070	0.810860	9.340669e-51	-8.615850e-47
Msa0488400	Msa0638320	0.801937	7.112371e-49	-8.615850e-47
Msa0488400	Msa0643220	0.807876	4.079450e-50	-8.615850e-47
Msa0488400	Msa0657970	0.816532	5.267139e-52	-8.615850e-47
Msa0488400	Msa0663920	0.804691	1.913014e-49	-8.615850e-47
Msa0488400	Msa0682900	0.811110	8.248010e-51	-8.615850e-47
Msa0488400	Msa0692230	0.800144	1.653998e-48	-8.615850e-47
Msa0488400	Msa0696640	0.801542	8.571078e-49	-8.615850e-47
Msa0488400	Msa0703230	0.803949	2.731190e-49	-8.615850e-47
Msa0488400	Msa0708520	0.805500	1.295698e-49	-8.615850e-47
Msa0488400	Msa0724830	0.803257	3.799825e-49	-8.615850e-47
Msa0488400	Msa0742380	0.801542	8.571400e-49	-8.615850e-47
Msa0488400	Msa0744040	0.802597	5.202807e-49	-8.615850e-47
Msa0488400	Msa0760380	0.820065	8.351859e-53	-8.615850e-47
Msa0488400	Msa0761940	0.811204	7.869704e-51	-8.615850e-47
Msa0488400	Msa0767300	0.800867	1.178077e-48	-8.615850e-47
Msa0488400	Msa0790510	0.804467	2.130516e-49	-8.615850e-47
Msa0488400	Msa0791070	0.819323	1.233428e-52	-8.615850e-47
Msa0488400	Msa0801760	0.830891	2.275279e-55	-8.615850e-47
Msa0488400	Msa0803890	0.803871	2.833915e-49	-8.615850e-47
Msa0488400	Msa0824680	0.806702	7.234079e-50	-8.615850e-47
Msa0488400	Msa0876200	0.824042	9.997844e-54	-8.615850e-47
Msa0488400	Msa0878500	0.808399	3.156770e-50	-8.615850e-47
Msa0488400	Msa0880140	0.813704	2.236623e-51	-8.615850e-47
Msa0488400	Msa0910980	-0.800093	1.694337e-48	-8.615850e-47
Msa0488400	Msa0935670	0.802772	4.786446e-49	-8.615850e-47
Msa0488400	Msa0944190	0.821866	3.215699e-53	-8.615850e-47
Msa0488400	Msa0945970	0.808811	2.577493e-50	-8.615850e-47
Msa0488400	Msa0958970	0.804265	2.346790e-49	-8.615850e-47
Msa0488400	Msa1003750	0.809240	2.086171e-50	-8.615850e-47
Msa0488400	Msa1010350	0.800653	1.302971e-48	-8.615850e-47
Msa0488400	Msa1023400	0.825012	5.912049e-54	-8.615850e-47
Msa0488400	Msa1040830	0.807064	6.067007e-50	-8.615850e-47
Msa0488400	Msa1040890	0.812587	3.934173e-51	-8.615850e-47
Msa0488400	Msa1082500	0.819626	1.052396e-52	-8.615850e-47
Msa0488400	Msa1083210	0.800760	1.238877e-48	-8.615850e-47
Msa0488400	Msa1097800	0.812324	4.490247e-51	-8.615850e-47
Msa0488400	Msa1111110	0.802382	5.760058e-49	-8.615850e-47
Msa0488400	Msa1125760	0.801467	8.883638e-49	-8.615850e-47
Msa0488400	Msa1127890	0.814633	1.394773e-51	-8.615850e-47
Msa0488400	Msa1131220	0.802097	6.595160e-49	-8.615850e-47
Msa0488400	Msa1151910	0.805690	1.182033e-49	-8.615850e-47
Msa0488400	Msa1170280	0.802062	6.705836e-49	-8.615850e-47
Msa0488400	Msa1178610	0.802241	6.160024e-49	-8.615850e-47
Msa0488400	Msa1187840	0.818675	1.732077e-52	-8.615850e-47
Msa0488400	Msa1199560	0.844536	7.112898e-59	-8.615850e-47
Msa0488400	Msa1203250	0.808891	2.478802e-50	-8.615850e-47
Msa0488400	Msa1214890	0.811915	5.512652e-51	-8.615850e-47
Msa0488400	Msa1228210	0.807623	4.617180e-50	-8.615850e-47
Msa0488400	Msa1233500	0.812667	3.778187e-51	-8.615850e-47
Msa0488400	Msa1233890	0.809120	2.214294e-50	-8.615850e-47
Msa0488400	Msa1240310	0.805427	1.342019e-49	-8.615850e-47
Msa0488400	Msa1242230	0.821264	4.428081e-53	-8.615850e-47
Msa0488400	Msa1242240	0.816711	4.802750e-52	-8.615850e-47
Msa0488400	Msa1261010	0.805744	1.151482e-49	-8.615850e-47
Msa0488400	Msa1270610	0.827597	1.433101e-54	-8.615850e-47
Msa0488400	Msa1270680	0.821042	4.981914e-53	-8.615850e-47
Msa0488400	Msa1271280	0.820503	6.625858e-53	-8.615850e-47
Msa0488400	Msa1271300	0.804142	2.489587e-49	-8.615850e-47
Msa0488400	Msa1275540	0.804282	2.328419e-49	-8.615850e-47
Msa0488400	Msa1279210	0.818749	1.666240e-52	-8.615850e-47
Msa0488400	Msa1281180	0.806730	7.136185e-50	-8.615850e-47
Msa0488400	Msa1283840	0.814210	1.730051e-51	-8.615850e-47
Msa0488400	Msa1283860	0.803889	2.809573e-49	-8.615850e-47
Msa0488400	Msa1284260	0.812648	3.814931e-51	-8.615850e-47
Msa0488400	Msa1288420	0.806539	7.833578e-50	-8.615850e-47
Msa0488400	Msa1300490	0.811772	5.924064e-51	-8.615850e-47
Msa0488400	Msa1316780	0.831930	1.262826e-55	-8.615850e-47
Msa0488400	Msa1316830	0.821968	3.044814e-53	-8.615850e-47
Msa0488400	Msa1318990	0.801387	9.221353e-49	-8.615850e-47
Msa0488400	Msa1320740	0.821131	4.753373e-53	-8.615850e-47
Msa0488400	Msa1322860	0.814023	1.902689e-51	-8.615850e-47
Msa0488400	Msa1327050	0.800703	1.272882e-48	-8.615850e-47
Msa0488400	Msa1328700	0.835763	1.388485e-56	-8.615850e-47
Msa0488400	Msa1331910	0.801414	9.107037e-49	-8.615850e-47
Msa0488400	Msa1336710	0.816008	6.898937e-52	-8.615850e-47
Msa0488400	Msa1340020	0.812396	4.329314e-51	-8.615850e-47
Msa0488400	Msa1340650	0.832724	8.028666e-56	-8.615850e-47
Msa0488400	Msa1350840	0.814236	1.706988e-51	-8.615850e-47
Msa0488400	Msa1351730	0.802303	5.981616e-49	-8.615850e-47
Msa0488400	Msa1371430	0.818439	1.958697e-52	-8.615850e-47
Msa0488400	Msa1384350	0.814651	1.381963e-51	-8.615850e-47
Msa0488400	Msa1397810	0.804705	1.900317e-49	-8.615850e-47
Msa0488400	Msa1414740	0.801001	1.106359e-48	-8.615850e-47
Msa0488400	Msa1415640	0.813850	2.077791e-51	-8.615850e-47
Msa0488400	Msa1453080	0.801084	1.063920e-48	-8.615850e-47
Msa0488400	Msa1457910	0.823342	1.458497e-53	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0488400	MtrunA17_Chr3g0078281	95.610	205	8	1	1	205	1	204	3.24e-144	399

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0488400	AT5G04910.1	69.780	182	55	0	24	205	41	222	1.20e-83	247

Find 58 sgRNAs with CRISPR-Local

Find 323 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ATGGAAGAAGATTTGGAATT+TGG	0.083112	3_4:+8116733	Msa0488400:CDS
GATTGTAATGGATGGTTATT+TGG	0.208831	3_4:+8121111	Msa0488400:three_prime_UTR
ACAAGTAATTTATATTAAAA+TGG	0.239680	3_4:+8121034	Msa0488400:three_prime_UTR
ACGAAGCAAAACAGCGATTT+TGG	0.256682	3_4:-8116806	None:intergenic
CGGAGTGATGGAAGAAGATT+TGG	0.282022	3_4:+8116726	Msa0488400:exon
AAGGAGATCACTGAAGCTTC+TGG	0.308239	3_4:+8120760	Msa0488400:CDS
CATGACTTCTGGAGGGGAAT+TGG	0.328109	3_4:+8118066	Msa0488400:CDS
ACACAAGAAGGGTGCCGTTT+TGG	0.333658	3_4:+8116656	Msa0488400:five_prime_UTR
TGGAAGAAGATTTGGAATTT+GGG	0.347258	3_4:+8116734	Msa0488400:CDS
TGCTCAGTGCTAACAGATAT+TGG	0.350928	3_4:+8120946	Msa0488400:three_prime_UTR
AGCGAGTGAGTTGAATAAAA+AGG	0.367800	3_4:+8116695	Msa0488400:five_prime_UTR
CCTGTTCTTGAACAGCTCTA+AGG	0.384342	3_4:-8118321	None:intergenic
AGATCAATGCGGCTATAGTC+AGG	0.401278	3_4:-8118289	None:intergenic
ACTTTATTACTTGATTGTAA+TGG	0.416431	3_4:+8121099	Msa0488400:three_prime_UTR
TTGTAAATTTGCAATTATCA+TGG	0.426145	3_4:-8120708	None:intergenic
CCTTAGAGCTGTTCAAGAAC+AGG	0.429245	3_4:+8118321	Msa0488400:CDS
GTTTCTTCCCTTTGCCAAAA+CGG	0.431987	3_4:-8116670	None:intergenic
AGATTTGGAATTTGGGAAGA+AGG	0.436083	3_4:+8116741	Msa0488400:CDS
AAGCTTATTCCAAACTCAAA+AGG	0.441845	3_4:+8116860	Msa0488400:CDS
GCATGAGTGTGTCCATGTTA+AGG	0.447012	3_4:+8120741	Msa0488400:CDS
CCGCTTTCTTTAACAGCTGA+AGG	0.459259	3_4:-8120660	None:intergenic
ATCATGGCTTACCAGTCGTT+CGG	0.468178	3_4:-8120692	None:intergenic
GAAACAACGACTCCATTTCA+CGG	0.488812	3_4:-8118261	None:intergenic
TGAAGCTATTAGAGGTGTCC+AGG	0.497762	3_4:+8120828	Msa0488400:CDS
TTTCTTTATGATAAATGAGT+AGG	0.497898	3_4:+8121177	Msa0488400:three_prime_UTR
TGGACACACTCATGCTCTGT+TGG	0.499630	3_4:-8120733	None:intergenic
TTTAGCATAGGTCCGTGAAA+TGG	0.500168	3_4:+8118249	Msa0488400:intron
AGGAGATCACTGAAGCTTCT+GGG	0.504065	3_4:+8120761	Msa0488400:CDS
TGCAGAAATGAAACTACGCT+TGG	0.509383	3_4:-8121277	None:intergenic
GGAAAAGCAGAAACTACATC+TGG	0.524115	3_4:+8118342	Msa0488400:CDS
CAGTGCTAACAGATATTGGC+AGG	0.530419	3_4:+8120950	Msa0488400:three_prime_UTR
AATTTACAAACGACACAAGA+AGG	0.535507	3_4:+8116644	None:intergenic
TGATGACCATGACAGCATCC+TGG	0.539396	3_4:-8120846	None:intergenic
GGGTCGGCCATCCGAACGAC+TGG	0.546391	3_4:+8120681	Msa0488400:CDS
TATTACTTGATTGTAATGGA+TGG	0.548701	3_4:+8121103	Msa0488400:three_prime_UTR
TGGCAGGTGTTTACAACCAG+TGG	0.551061	3_4:+8120966	Msa0488400:three_prime_UTR
TGTGCCTATGTACATTCCAC+TGG	0.555149	3_4:-8120982	None:intergenic
AGGTGTCCAGGATGCTGTCA+TGG	0.560024	3_4:+8120840	Msa0488400:CDS
CTTCAGCTGTTAAAGAAAGC+GGG	0.562359	3_4:+8120661	Msa0488400:CDS
CTTCAGTGATCTCCTTAACA+TGG	0.563538	3_4:-8120753	None:intergenic
GCTGTGAATGAAGCTATTAG+AGG	0.564398	3_4:+8120820	Msa0488400:CDS
GCTTATCAGCAGCTTTGCAG+TGG	0.569257	3_4:+8118088	Msa0488400:CDS
ACTTGAAGCAGAGTAATACT+TGG	0.577210	3_4:+8120906	Msa0488400:exon
CCTTCAGCTGTTAAAGAAAG+CGG	0.588320	3_4:+8120660	Msa0488400:CDS
TGGGACTGAAGAAGCAGAAG+CGG	0.588338	3_4:+8120780	Msa0488400:CDS
ATTCACAGCATTATCATACT+CGG	0.588368	3_4:-8120806	None:intergenic
CGCTTTCTTTAACAGCTGAA+GGG	0.591750	3_4:-8120659	None:intergenic
TTCGATAAACGACGACACAA+TGG	0.594243	3_4:+8116765	Msa0488400:CDS
CTGACTACATGACTTCTGGA+GGG	0.596770	3_4:+8118059	Msa0488400:CDS
ACAACCAGTGGAATGTACAT+AGG	0.597483	3_4:+8120978	Msa0488400:three_prime_UTR
TCTGACTACATGACTTCTGG+AGG	0.598390	3_4:+8118058	Msa0488400:CDS
ATTTACAAACGACACAAGAA+GGG	0.598401	3_4:+8116645	Msa0488400:five_prime_UTR
TGGCTTACCAGTCGTTCGGA+TGG	0.598843	3_4:-8120688	None:intergenic
TGACTACATGACTTCTGGAG+GGG	0.607829	3_4:+8118060	Msa0488400:CDS
AGGGGAAGATGTAAAGAACA+TGG	0.610490	3_4:-8121205	None:intergenic
GATCAATGCGGCTATAGTCA+GGG	0.644027	3_4:-8118288	None:intergenic
AGCTGTTAAAGAAAGCGGGT+CGG	0.673250	3_4:+8120665	Msa0488400:CDS
GGATTTGTGCTAGATCAATG+CGG	0.738873	3_4:-8118300	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATACTTATAAAATAGATATA+AGG	-	chr3_4:8116967-8116986	None:intergenic	10.0%
!!	ACAAGTAATTTATATTAAAA+TGG	+	chr3_4:8121034-8121053	Msa0488400:three_prime_UTR	10.0%
!!!	TAATTTTTAAAATAGCAAAA+GGG	-	chr3_4:8121227-8121246	None:intergenic	10.0%
!!!	ATAATTTTTAAAATAGCAAA+AGG	-	chr3_4:8121228-8121247	None:intergenic	10.0%
!!!	TTAAATTTCTAGATTTATGT+TGG	+	chr3_4:8117826-8117845	Msa0488400:intron	15.0%
!!!	TGAATTTTCATAATAGAAAA+AGG	-	chr3_4:8117937-8117956	None:intergenic	15.0%
!!	AATTCATACAATGTATTAAT+AGG	+	chr3_4:8117951-8117970	Msa0488400:intron	15.0%
!!	ATTCATACAATGTATTAATA+GGG	+	chr3_4:8117952-8117971	Msa0488400:intron	15.0%
!!!	TTATCTTTTTACTTTAGTTT+TGG	-	chr3_4:8120064-8120083	None:intergenic	15.0%
!!	AAAACTAAAGTAAAAAGATA+AGG	+	chr3_4:8120063-8120082	Msa0488400:intron	15.0%
!!!	AATTTTTAAAATAGCAAAAG+GGG	-	chr3_4:8121226-8121245	None:intergenic	15.0%
!!!	TATGTTGGTTGTTTTTTAAA+AGG	+	chr3_4:8117841-8117860	Msa0488400:intron	20.0%
!!!	TTCTTTTTATATCTTCTATC+TGG	+	chr3_4:8118474-8118493	Msa0488400:intron	20.0%
!!!	TCTTTTTATATCTTCTATCT+GGG	+	chr3_4:8118475-8118494	Msa0488400:intron	20.0%
!!	TATAGTTGATTAAATAGAAC+AGG	-	chr3_4:8118662-8118681	None:intergenic	20.0%
!!	TTGAACATACATGAAATTAA+AGG	-	chr3_4:8118766-8118785	None:intergenic	20.0%
!!!	GCTGATTTAACTAAAAAAAA+AGG	-	chr3_4:8118852-8118871	None:intergenic	20.0%
!!	TTCTTAAGGTAATACTATTA+GGG	-	chr3_4:8119123-8119142	None:intergenic	20.0%
!!	TTTCTTAAGGTAATACTATT+AGG	-	chr3_4:8119124-8119143	None:intergenic	20.0%
!!	AAAAAAACAGTAATGATTTG+AGG	+	chr3_4:8120369-8120388	Msa0488400:intron	20.0%
!!	AAAAAACAGTAATGATTTGA+GGG	+	chr3_4:8120370-8120389	Msa0488400:intron	20.0%
!!	AATACAAAACACTTGAATTT+AGG	-	chr3_4:8120606-8120625	None:intergenic	20.0%
!!	TTGTAAATTTGCAATTATCA+TGG	-	chr3_4:8120711-8120730	None:intergenic	20.0%
!!	ACTTTATTACTTGATTGTAA+TGG	+	chr3_4:8121099-8121118	Msa0488400:three_prime_UTR	20.0%
!!	TTTCTTTATGATAAATGAGT+AGG	+	chr3_4:8121177-8121196	Msa0488400:three_prime_UTR	20.0%
!	TGAATAAAAAGGCGAAAAAT+CGG	+	chr3_4:8116706-8116725	Msa0488400:five_prime_UTR	25.0%
!!	AGTTGAATTTTTGTGCAATT+TGG	-	chr3_4:8116910-8116929	None:intergenic	25.0%
!!	ATATTGACTGTGTAAAAGTA+CGG	-	chr3_4:8117155-8117174	None:intergenic	25.0%
!	AATTAAATATACCGTAACAC+CGG	-	chr3_4:8117545-8117564	None:intergenic	25.0%
!	GTAAGTTAACTTCAATCTTA+GGG	+	chr3_4:8117887-8117906	Msa0488400:intron	25.0%
!	CAATGTCATTATGAAACATT+TGG	-	chr3_4:8118013-8118032	None:intergenic	25.0%
!	GTTTAATGATTGCTCAAAAA+AGG	+	chr3_4:8118123-8118142	Msa0488400:CDS	25.0%
!	TGAAAGAAAACGATAATGTT+AGG	-	chr3_4:8118162-8118181	None:intergenic	25.0%
!!	TATCTTTTCTGATTTAGCAT+AGG	+	chr3_4:8118237-8118256	Msa0488400:intron	25.0%
!!	TGATGTTTTATGTGCATTAT+TGG	+	chr3_4:8118541-8118560	Msa0488400:intron	25.0%
!	GTTAAAATATTAGCTAAACC+TGG	+	chr3_4:8118809-8118828	Msa0488400:intron	25.0%
!	TAATTCAAAAACTTCAGTTC+TGG	+	chr3_4:8119017-8119036	Msa0488400:intron	25.0%
!!	ACATCTTTTGATATGTTTCA+CGG	+	chr3_4:8119171-8119190	Msa0488400:intron	25.0%
!	AACCATTAGAAAAGATTTAG+AGG	-	chr3_4:8119320-8119339	None:intergenic	25.0%
!!	GTTTCTCTAATAGTTTTCTT+AGG	+	chr3_4:8119337-8119356	Msa0488400:intron	25.0%
!!!	TAGAAAAGTTGGTAGAAAAT+AGG	-	chr3_4:8119462-8119481	None:intergenic	25.0%
!	AAGTAAAAAGATAAGGACTT+AGG	+	chr3_4:8120070-8120089	Msa0488400:intron	25.0%
!	AGTAAAAAGATAAGGACTTA+GGG	+	chr3_4:8120071-8120090	Msa0488400:intron	25.0%
!!	ATTTTGTTGAATCACTTGAA+CGG	+	chr3_4:8120415-8120434	Msa0488400:intron	25.0%
!!!	ATTCTGCTTACTTTTAATTG+TGG	+	chr3_4:8120542-8120561	Msa0488400:intron	25.0%
!!	TATTACTTGATTGTAATGGA+TGG	+	chr3_4:8121103-8121122	Msa0488400:three_prime_UTR	25.0%
	ATTTACAAACGACACAAGAA+GGG	+	chr3_4:8116645-8116664	Msa0488400:five_prime_UTR	30.0%
!	ATGGAAGAAGATTTGGAATT+TGG	+	chr3_4:8116733-8116752	Msa0488400:CDS	30.0%
!	TGGAAGAAGATTTGGAATTT+GGG	+	chr3_4:8116734-8116753	Msa0488400:CDS	30.0%
	AAGCTTATTCCAAACTCAAA+AGG	+	chr3_4:8116860-8116879	Msa0488400:CDS	30.0%
!	TGAATTTTTGTGCAATTTGG+CGG	-	chr3_4:8116907-8116926	None:intergenic	30.0%
!	ATCTTTTGATCTGTAACCTA+TGG	+	chr3_4:8116985-8117004	Msa0488400:intron	30.0%
!!	TATGTGTGTGTTTGTTATCA+CGG	+	chr3_4:8117184-8117203	Msa0488400:intron	30.0%
	TAGCTTCTGTAAAATCACTA+TGG	-	chr3_4:8117234-8117253	None:intergenic	30.0%
	ATAGCCTATGTTTAGTATCA+CGG	-	chr3_4:8117311-8117330	None:intergenic	30.0%
	TATATCAATGTTGTCAACAG+TGG	+	chr3_4:8117328-8117347	Msa0488400:intron	30.0%
	TCAAAATTCCAAAAACATGC+TGG	-	chr3_4:8117618-8117637	None:intergenic	30.0%
	CGTAAGTTAACTTCAATCTT+AGG	+	chr3_4:8117886-8117905	Msa0488400:intron	30.0%
	CAATGTATTAATAGGGCTAT+TGG	+	chr3_4:8117959-8117978	Msa0488400:intron	30.0%
	TGACATTGAAATTTGACACT+TGG	+	chr3_4:8118025-8118044	Msa0488400:intron	30.0%
	AAGAAATGTGCTTAAACTAG+GGG	-	chr3_4:8118372-8118391	None:intergenic	30.0%
	GAAGAAATGTGCTTAAACTA+GGG	-	chr3_4:8118373-8118392	None:intergenic	30.0%
	AGAAGAAATGTGCTTAAACT+AGG	-	chr3_4:8118374-8118393	None:intergenic	30.0%
	CATTCATACAGAATGATCAT+AGG	-	chr3_4:8118437-8118456	None:intergenic	30.0%
	CTCTTTGACCATTAAATCTT+CGG	+	chr3_4:8118579-8118598	Msa0488400:intron	30.0%
	AAGAATAGCCGAAGATTTAA+TGG	-	chr3_4:8118590-8118609	None:intergenic	30.0%
	ATTTGACTAAACATTCCAAC+AGG	-	chr3_4:8118713-8118732	None:intergenic	30.0%
	AATTAAAGGAACATCCTTGA+GGG	-	chr3_4:8118752-8118771	None:intergenic	30.0%
	AAATTAAAGGAACATCCTTG+AGG	-	chr3_4:8118753-8118772	None:intergenic	30.0%
	CCTTAATCTTGGTATAAACA+AGG	-	chr3_4:8118892-8118911	None:intergenic	30.0%
!	CCTTGTTTATACCAAGATTA+AGG	+	chr3_4:8118889-8118908	Msa0488400:intron	30.0%
!	CATAATTCTTTTCCGAAAAC+AGG	-	chr3_4:8118953-8118972	None:intergenic	30.0%
	TTCGGAAAAGAATTATGAAC+TGG	+	chr3_4:8118956-8118975	Msa0488400:intron	30.0%
	TCGGAAAAGAATTATGAACT+GGG	+	chr3_4:8118957-8118976	Msa0488400:intron	30.0%
	ACATAAATGTAGCATGTCTT+TGG	-	chr3_4:8119095-8119114	None:intergenic	30.0%
	TCTTTGATAGAACATTATGG+CGG	-	chr3_4:8119273-8119292	None:intergenic	30.0%
	TGGTCTTTGATAGAACATTA+TGG	-	chr3_4:8119276-8119295	None:intergenic	30.0%
	GTTCTATCAAAGACCATATT+TGG	+	chr3_4:8119280-8119299	Msa0488400:intron	30.0%
!	GACCTCTAAATCTTTTCTAA+TGG	+	chr3_4:8119315-8119334	Msa0488400:intron	30.0%
!	TCTACCAACTTTTCTACTAT+AGG	+	chr3_4:8119466-8119485	Msa0488400:intron	30.0%
	TTACACGGTTTAGATATCTT+GGG	-	chr3_4:8119798-8119817	None:intergenic	30.0%
	ATATCTAAACCGTGTAACTT+GGG	+	chr3_4:8119801-8119820	Msa0488400:intron	30.0%
	ACTTCAGTAAAAGGAGAAAT+GGG	-	chr3_4:8119864-8119883	None:intergenic	30.0%
	AACTTCAGTAAAAGGAGAAA+TGG	-	chr3_4:8119865-8119884	None:intergenic	30.0%
	TGGAATGTAACTTCAGTAAA+AGG	-	chr3_4:8119873-8119892	None:intergenic	30.0%
	TAGAAACAAGACGGAATATA+TGG	-	chr3_4:8119893-8119912	None:intergenic	30.0%
!!!	TTTAGTTTTGGATGTACTGA+CGG	-	chr3_4:8120052-8120071	None:intergenic	30.0%
	TATTGTTATGGGAAAATCTC+CGG	+	chr3_4:8120113-8120132	Msa0488400:intron	30.0%
	TGTGTTAAGTCTAATCAATC+AGG	-	chr3_4:8120327-8120346	None:intergenic	30.0%
!	TTGACCTTGAAAATTTTGCT+CGG	+	chr3_4:8120491-8120510	Msa0488400:intron	30.0%
!	TTATCCGAGCAAAATTTTCA+AGG	-	chr3_4:8120498-8120517	None:intergenic	30.0%
	AAGTAAGCAGAATAACTAAC+TGG	-	chr3_4:8120535-8120554	None:intergenic	30.0%
	ATTCACAGCATTATCATACT+CGG	-	chr3_4:8120809-8120828	None:intergenic	30.0%
!!	GATTGTAATGGATGGTTATT+TGG	+	chr3_4:8121111-8121130	Msa0488400:three_prime_UTR	30.0%
!	AGCGAGTGAGTTGAATAAAA+AGG	+	chr3_4:8116695-8116714	Msa0488400:five_prime_UTR	35.0%
!	AGATTTGGAATTTGGGAAGA+AGG	+	chr3_4:8116741-8116760	Msa0488400:CDS	35.0%
!!!	AGTAACGAACCTTTTGAGTT+TGG	-	chr3_4:8116872-8116891	None:intergenic	35.0%
!!!	ACTGAGTCATTTTTAGCCAT+AGG	-	chr3_4:8117004-8117023	None:intergenic	35.0%
	TAACAATCATCTTGCTCTCT+GGG	-	chr3_4:8117034-8117053	None:intergenic	35.0%
	ATAACAATCATCTTGCTCTC+TGG	-	chr3_4:8117035-8117054	None:intergenic	35.0%
!	AAGCTACAAAGTGTAGCTTT+TGG	+	chr3_4:8117248-8117267	Msa0488400:intron	35.0%
!!	AGCTTTTGGAAAATCACGAT+AGG	+	chr3_4:8117262-8117281	Msa0488400:intron	35.0%
!	AAATCTTGCCAGCATGTTTT+TGG	+	chr3_4:8117607-8117626	Msa0488400:intron	35.0%
!!	TTTGACCTAATTCTGAGATG+TGG	+	chr3_4:8117633-8117652	Msa0488400:intron	35.0%
	TAGTACCACATCTCAGAATT+AGG	-	chr3_4:8117641-8117660	None:intergenic	35.0%
	TGATGCAGCAGTCAAAATAA+TGG	-	chr3_4:8117679-8117698	None:intergenic	35.0%
	TAACAGAGTAAATCAGTCTG+TGG	-	chr3_4:8117745-8117764	None:intergenic	35.0%
!	TTTTCTGACTACATGACTTC+TGG	+	chr3_4:8118055-8118074	Msa0488400:CDS	35.0%
	TGCATTATTGGTATATCGAG+TGG	+	chr3_4:8118553-8118572	Msa0488400:intron	35.0%
	GCATTATTGGTATATCGAGT+GGG	+	chr3_4:8118554-8118573	Msa0488400:intron	35.0%
	ACATAGTAACTTGATCCTGT+TGG	+	chr3_4:8118695-8118714	Msa0488400:intron	35.0%
	CATGTATGTTCAACCTGTTA+AGG	+	chr3_4:8118773-8118792	Msa0488400:intron	35.0%
	GCTACATTTAGATATTCACC+AGG	-	chr3_4:8118830-8118849	None:intergenic	35.0%
!	TACCTCAAATCACCTGTTTT+CGG	+	chr3_4:8118938-8118957	Msa0488400:intron	35.0%
	AATTACCCTAATCCAACCAA+GGG	-	chr3_4:8118988-8119007	None:intergenic	35.0%
	AAATTACCCTAATCCAACCA+AGG	-	chr3_4:8118989-8119008	None:intergenic	35.0%
	AAAATCAGACAACTTCTCTG+TGG	+	chr3_4:8119043-8119062	Msa0488400:intron	35.0%
	TAAATGTAGCATGTCTTTGG+TGG	-	chr3_4:8119092-8119111	None:intergenic	35.0%
	ACCTTAAGAAAAATCCCCAA+AGG	+	chr3_4:8119133-8119152	Msa0488400:intron	35.0%
	CCTTAAGAAAAATCCCCAAA+GGG	+	chr3_4:8119134-8119153	Msa0488400:intron	35.0%
	AATATATTGACCACCCTTTG+GGG	-	chr3_4:8119150-8119169	None:intergenic	35.0%
	CAATATATTGACCACCCTTT+GGG	-	chr3_4:8119151-8119170	None:intergenic	35.0%
	TCAATATATTGACCACCCTT+TGG	-	chr3_4:8119152-8119171	None:intergenic	35.0%
!	CAATGAGTTGGATCCAAATA+TGG	-	chr3_4:8119296-8119315	None:intergenic	35.0%
	AGATTTAGAGGTCAATGAGT+TGG	-	chr3_4:8119308-8119327	None:intergenic	35.0%
	AAGAAGAGTAGATCAAATGG+AGG	-	chr3_4:8119392-8119411	None:intergenic	35.0%
	GGTAAGAAGAGTAGATCAAA+TGG	-	chr3_4:8119395-8119414	None:intergenic	35.0%
	TTGATCTACTCTTCTTACCA+CGG	+	chr3_4:8119396-8119415	Msa0488400:intron	35.0%
	GAAAATAGGCTTAGATGGTT+TGG	-	chr3_4:8119448-8119467	None:intergenic	35.0%
	TGGTAGAAAATAGGCTTAGA+TGG	-	chr3_4:8119453-8119472	None:intergenic	35.0%
	AGCACCTATAGTAGAAAAGT+TGG	-	chr3_4:8119473-8119492	None:intergenic	35.0%
	AGACTAGACATGATAGGATT+AGG	-	chr3_4:8119525-8119544	None:intergenic	35.0%
	AGCTGAAAGGAAAGTTCTAT+CGG	-	chr3_4:8119660-8119679	None:intergenic	35.0%
	AACTTTCCTTTCAGCTTAAG+TGG	+	chr3_4:8119664-8119683	Msa0488400:intron	35.0%
!	AAAGTACCACTTAAGCTGAA+AGG	-	chr3_4:8119673-8119692	None:intergenic	35.0%
	TACATCATCGTATTCAAGCT+GGG	-	chr3_4:8119738-8119757	None:intergenic	35.0%
!!	TTCTCCGTCATTTTGTACTA+TGG	+	chr3_4:8119771-8119790	Msa0488400:intron	35.0%
	GTTACACGGTTTAGATATCT+TGG	-	chr3_4:8119799-8119818	None:intergenic	35.0%
	GATATCTAAACCGTGTAACT+TGG	+	chr3_4:8119800-8119819	Msa0488400:intron	35.0%
	TATCTAAACCGTGTAACTTG+GGG	+	chr3_4:8119802-8119821	Msa0488400:intron	35.0%
	ATATCATACCCCAAGTTACA+CGG	-	chr3_4:8119813-8119832	None:intergenic	35.0%
!	TCTGCAAAAAGCATACATCT+CGG	+	chr3_4:8120006-8120025	Msa0488400:intron	35.0%
	TAACAATAGGATTGCACCAA+GGG	-	chr3_4:8120101-8120120	None:intergenic	35.0%
	ATAACAATAGGATTGCACCA+AGG	-	chr3_4:8120102-8120121	None:intergenic	35.0%
	TTGGTGCAATCCTATTGTTA+TGG	+	chr3_4:8120101-8120120	Msa0488400:intron	35.0%
	TGGTGCAATCCTATTGTTAT+GGG	+	chr3_4:8120102-8120121	Msa0488400:intron	35.0%
!	GGAGATTTTCCCATAACAAT+AGG	-	chr3_4:8120114-8120133	None:intergenic	35.0%
!!	ATCCTGGATAGCTCTAATAT+AGG	+	chr3_4:8120182-8120201	Msa0488400:intron	35.0%
	TTGCTCGGATAACATGATAA+CGG	+	chr3_4:8120506-8120525	Msa0488400:intron	35.0%
!!	CTTTTAATTGTGGACGTGAT+TGG	+	chr3_4:8120552-8120571	Msa0488400:intron	35.0%
	ACTTGAAGCAGAGTAATACT+TGG	+	chr3_4:8120906-8120925	Msa0488400:exon	35.0%
	GTTTCTTCCCTTTGCCAAAA+CGG	-	chr3_4:8116673-8116692	None:intergenic	40.0%
	TTCGATAAACGACGACACAA+TGG	+	chr3_4:8116765-8116784	Msa0488400:CDS	40.0%
!	AAGCAAAACAGCGATTTTGG+TGG	-	chr3_4:8116806-8116825	None:intergenic	40.0%
!	ACGAAGCAAAACAGCGATTT+TGG	-	chr3_4:8116809-8116828	None:intergenic	40.0%
!	GTTATGTTAGTTTCCGCTTC+CGG	+	chr3_4:8117070-8117089	Msa0488400:intron	40.0%
!	ACTGTGTAAAAGTACGGTGT+AGG	-	chr3_4:8117149-8117168	None:intergenic	40.0%
!!	TGTGTGTTTGTTATCACGGT+GGG	+	chr3_4:8117188-8117207	Msa0488400:intron	40.0%
	ACTATGGATCGTCATGATTC+TGG	-	chr3_4:8117218-8117237	None:intergenic	40.0%
!	AATATACCGTAACACCGGTT+AGG	-	chr3_4:8117540-8117559	None:intergenic	40.0%
	CTGGCAAGATTTACACGTTT+GGG	-	chr3_4:8117599-8117618	None:intergenic	40.0%
!	TCTGAGATGTGGTACTATAG+CGG	+	chr3_4:8117644-8117663	Msa0488400:intron	40.0%
	TGAAATTTGACACTTGGCAG+TGG	+	chr3_4:8118031-8118050	Msa0488400:intron	40.0%
	TTTAGCATAGGTCCGTGAAA+TGG	+	chr3_4:8118249-8118268	Msa0488400:intron	40.0%
	GAAACAACGACTCCATTTCA+CGG	-	chr3_4:8118264-8118283	None:intergenic	40.0%
	GGATTTGTGCTAGATCAATG+CGG	-	chr3_4:8118303-8118322	None:intergenic	40.0%
	GGAAAAGCAGAAACTACATC+TGG	+	chr3_4:8118342-8118361	Msa0488400:CDS	40.0%
	ATTGAAGTTTCGTACCCTCA+AGG	+	chr3_4:8118735-8118754	Msa0488400:intron	40.0%
	CAAACAAAGAGAGCCTTAAC+AGG	-	chr3_4:8118789-8118808	None:intergenic	40.0%
	CTGTTAAGGCTCTCTTTGTT+TGG	+	chr3_4:8118787-8118806	Msa0488400:intron	40.0%
	GGACGAAAAAGCCTTAATCT+TGG	-	chr3_4:8118903-8118922	None:intergenic	40.0%
	GAGGTAGCATGTCATAAAGA+AGG	-	chr3_4:8118924-8118943	None:intergenic	40.0%
	TTCCGAAAACAGGTGATTTG+AGG	-	chr3_4:8118943-8118962	None:intergenic	40.0%
	TAACACCCTTGGTTGGATTA+GGG	+	chr3_4:8118980-8118999	Msa0488400:intron	40.0%
	TCTGTGGTCATCTGTTAACT+TGG	+	chr3_4:8119059-8119078	Msa0488400:intron	40.0%
!!	CCCTTTGGGGATTTTTCTTA+AGG	-	chr3_4:8119137-8119156	None:intergenic	40.0%
	TAAGAAAAATCCCCAAAGGG+TGG	+	chr3_4:8119137-8119156	Msa0488400:intron	40.0%
	AGTCAGGTTAAAAGAGGTAG+AGG	-	chr3_4:8119367-8119386	None:intergenic	40.0%
	ACATCATTAGAGAGAGAGTG+GGG	-	chr3_4:8119498-8119517	None:intergenic	40.0%
	GACATCATTAGAGAGAGAGT+GGG	-	chr3_4:8119499-8119518	None:intergenic	40.0%
	TGACATCATTAGAGAGAGAG+TGG	-	chr3_4:8119500-8119519	None:intergenic	40.0%
	GTGGTAAGACTAGACATGAT+AGG	-	chr3_4:8119531-8119550	None:intergenic	40.0%
	GTACATCATCGTATTCAAGC+TGG	-	chr3_4:8119739-8119758	None:intergenic	40.0%
	GGGTCCATAGTACAAAATGA+CGG	-	chr3_4:8119778-8119797	None:intergenic	40.0%
	ATCTCCAACTTTCACCTCTA+AGG	+	chr3_4:8119834-8119853	Msa0488400:intron	40.0%
	TCTACCTTAGAGGTGAAAGT+TGG	-	chr3_4:8119841-8119860	None:intergenic	40.0%
!!	ATTCCGTCTTGTTTCTACTC+AGG	+	chr3_4:8119896-8119915	Msa0488400:intron	40.0%
	TATCCAGGATATGTATGAGG+GGG	-	chr3_4:8120172-8120191	None:intergenic	40.0%
	CTATCCAGGATATGTATGAG+GGG	-	chr3_4:8120173-8120192	None:intergenic	40.0%
	GCTATCCAGGATATGTATGA+GGG	-	chr3_4:8120174-8120193	None:intergenic	40.0%
	AGCTATCCAGGATATGTATG+AGG	-	chr3_4:8120175-8120194	None:intergenic	40.0%
	TGCCTATATTAGAGCTATCC+AGG	-	chr3_4:8120187-8120206	None:intergenic	40.0%
	GCTTTCCACAAAATCTCTCT+AGG	+	chr3_4:8120231-8120250	Msa0488400:intron	40.0%
!	GAGTACCTAGAGAGATTTTG+TGG	-	chr3_4:8120239-8120258	None:intergenic	40.0%
!	AGAAATCCGTGATTTGGAGA+AGG	-	chr3_4:8120271-8120290	None:intergenic	40.0%
	GTTGAATCACTTGAACGGAA+CGG	+	chr3_4:8120420-8120439	Msa0488400:intron	40.0%
!!	CTTTGCTGTTCTTTCTCAAG+TGG	+	chr3_4:8120452-8120471	Msa0488400:intron	40.0%
	CACTTGAATTTAGGTGAGTG+CGG	-	chr3_4:8120597-8120616	None:intergenic	40.0%
	CGCTTTCTTTAACAGCTGAA+GGG	-	chr3_4:8120662-8120681	None:intergenic	40.0%
	CCTTCAGCTGTTAAAGAAAG+CGG	+	chr3_4:8120660-8120679	Msa0488400:CDS	40.0%
	CTTCAGCTGTTAAAGAAAGC+GGG	+	chr3_4:8120661-8120680	Msa0488400:CDS	40.0%
	CTTCAGTGATCTCCTTAACA+TGG	-	chr3_4:8120756-8120775	None:intergenic	40.0%
	GCTGTGAATGAAGCTATTAG+AGG	+	chr3_4:8120820-8120839	Msa0488400:CDS	40.0%
	TGCTCAGTGCTAACAGATAT+TGG	+	chr3_4:8120946-8120965	Msa0488400:three_prime_UTR	40.0%
	ACAACCAGTGGAATGTACAT+AGG	+	chr3_4:8120978-8120997	Msa0488400:three_prime_UTR	40.0%
	AGGGGAAGATGTAAAGAACA+TGG	-	chr3_4:8121208-8121227	None:intergenic	40.0%
	AAGGCGAAAAATCGGAGTGA+TGG	+	chr3_4:8116714-8116733	Msa0488400:exon	45.0%
!	CGGAGTGATGGAAGAAGATT+TGG	+	chr3_4:8116726-8116745	Msa0488400:exon	45.0%
	ACATTAAACGAGGAGGTCTC+GGG	-	chr3_4:8117103-8117122	None:intergenic	45.0%
	GACATTAAACGAGGAGGTCT+CGG	-	chr3_4:8117104-8117123	None:intergenic	45.0%
	CTAAGCGACATTAAACGAGG+AGG	-	chr3_4:8117110-8117129	None:intergenic	45.0%
	GAGCTAAGCGACATTAAACG+AGG	-	chr3_4:8117113-8117132	None:intergenic	45.0%
	AAAGTACGGTGTAGGTAGCT+CGG	-	chr3_4:8117141-8117160	None:intergenic	45.0%
!!	GTGTGTGTTTGTTATCACGG+TGG	+	chr3_4:8117187-8117206	Msa0488400:intron	45.0%
	CTCGCCGTGATACTAAACAT+AGG	+	chr3_4:8117304-8117323	Msa0488400:intron	45.0%
	GTTTGACTCAAAGCATGTCG+TGG	+	chr3_4:8117371-8117390	Msa0488400:intron	45.0%
!!!	GCTTTTCAGTTCGGTGTTTC+AGG	-	chr3_4:8117577-8117596	None:intergenic	45.0%
!	CACGTTTGGGCTTTTCAGTT+CGG	-	chr3_4:8117586-8117605	None:intergenic	45.0%
	GCTGGCAAGATTTACACGTT+TGG	-	chr3_4:8117600-8117619	None:intergenic	45.0%
	GGCAGAACCATCTAGTATAG+CGG	-	chr3_4:8117703-8117722	None:intergenic	45.0%
	TCTGACTACATGACTTCTGG+AGG	+	chr3_4:8118058-8118077	Msa0488400:CDS	45.0%
	CTGACTACATGACTTCTGGA+GGG	+	chr3_4:8118059-8118078	Msa0488400:CDS	45.0%
!	TGACTACATGACTTCTGGAG+GGG	+	chr3_4:8118060-8118079	Msa0488400:CDS	45.0%
	GATCAATGCGGCTATAGTCA+GGG	-	chr3_4:8118291-8118310	None:intergenic	45.0%
	AGATCAATGCGGCTATAGTC+AGG	-	chr3_4:8118292-8118311	None:intergenic	45.0%
	CCTGTTCTTGAACAGCTCTA+AGG	-	chr3_4:8118324-8118343	None:intergenic	45.0%
	CCTTAGAGCTGTTCAAGAAC+AGG	+	chr3_4:8118321-8118340	Msa0488400:CDS	45.0%
	TATGAACTGGGTAACACCCT+TGG	+	chr3_4:8118969-8118988	Msa0488400:intron	45.0%
	GTAACACCCTTGGTTGGATT+AGG	+	chr3_4:8118979-8118998	Msa0488400:intron	45.0%
	AACGCCTTATCCCACTAAGT+GGG	+	chr3_4:8119226-8119245	Msa0488400:intron	45.0%
	GAGGAGAGTCAGGTTAAAAG+AGG	-	chr3_4:8119373-8119392	None:intergenic	45.0%
	AGATCAAATGGAGGAGAGTC+AGG	-	chr3_4:8119383-8119402	None:intergenic	45.0%
	CATCATTAGAGAGAGAGTGG+GGG	-	chr3_4:8119497-8119516	None:intergenic	45.0%
	CGAGAGTAAAGTAAGCGTAG+CGG	-	chr3_4:8119578-8119597	None:intergenic	45.0%
	CGCTTACTTTACTCTCGTGT+TGG	+	chr3_4:8119581-8119600	Msa0488400:intron	45.0%
!	GTTGTATGGTACGGAGTGTT+GGG	-	chr3_4:8119617-8119636	None:intergenic	45.0%
	TGTTGTATGGTACGGAGTGT+TGG	-	chr3_4:8119618-8119637	None:intergenic	45.0%
	TCCGTACCATACAACATTGC+CGG	+	chr3_4:8119622-8119641	Msa0488400:intron	45.0%
	ACCGGCAATGTTGTATGGTA+CGG	-	chr3_4:8119626-8119645	None:intergenic	45.0%
	CTTATCGCACAAAACACCTG+AGG	+	chr3_4:8119693-8119712	Msa0488400:intron	45.0%
	TTGAAATGGAGAAGAGCCTC+AGG	-	chr3_4:8119712-8119731	None:intergenic	45.0%
	TTCAAGCTGGGTGGTTGAAA+TGG	-	chr3_4:8119726-8119745	None:intergenic	45.0%
	ATCATCGTATTCAAGCTGGG+TGG	-	chr3_4:8119735-8119754	None:intergenic	45.0%
	GAGAAATGGGTCTACCTTAG+AGG	-	chr3_4:8119851-8119870	None:intergenic	45.0%
!	GCAGATGATGTAGTCTTGCT+TGG	-	chr3_4:8119991-8120010	None:intergenic	45.0%
!!	TACATCTCGGTGCTAACTCT+TGG	+	chr3_4:8120019-8120038	Msa0488400:intron	45.0%
!	AGAGATTTTGTGGAAAGCCC+TGG	-	chr3_4:8120229-8120248	None:intergenic	45.0%
	CATACGCCTTCTCCAAATCA+CGG	+	chr3_4:8120262-8120281	Msa0488400:intron	45.0%
	CGTACGAGAAATCCGTGATT+TGG	-	chr3_4:8120277-8120296	None:intergenic	45.0%
	CCGCTTTCTTTAACAGCTGA+AGG	-	chr3_4:8120663-8120682	None:intergenic	45.0%
	AGCTGTTAAAGAAAGCGGGT+CGG	+	chr3_4:8120665-8120684	Msa0488400:CDS	45.0%
	ATCATGGCTTACCAGTCGTT+CGG	-	chr3_4:8120695-8120714	None:intergenic	45.0%
	GCATGAGTGTGTCCATGTTA+AGG	+	chr3_4:8120741-8120760	Msa0488400:CDS	45.0%
	AAGGAGATCACTGAAGCTTC+TGG	+	chr3_4:8120760-8120779	Msa0488400:CDS	45.0%
	AGGAGATCACTGAAGCTTCT+GGG	+	chr3_4:8120761-8120780	Msa0488400:CDS	45.0%
!!	TGAAGCTATTAGAGGTGTCC+AGG	+	chr3_4:8120828-8120847	Msa0488400:CDS	45.0%
	CAGTGCTAACAGATATTGGC+AGG	+	chr3_4:8120950-8120969	Msa0488400:three_prime_UTR	45.0%
	TGTGCCTATGTACATTCCAC+TGG	-	chr3_4:8120985-8121004	None:intergenic	45.0%
!!!	ACACAAGAAGGGTGCCGTTT+TGG	+	chr3_4:8116656-8116675	Msa0488400:five_prime_UTR	50.0%
!!!	AAGGGTGCCGTTTTGGCAAA+GGG	+	chr3_4:8116663-8116682	Msa0488400:five_prime_UTR	50.0%
!	GAGAAGCCTAACCGGTGTTA+CGG	+	chr3_4:8117531-8117550	Msa0488400:intron	50.0%
	GCATCAGCCGCTATACTAGA+TGG	+	chr3_4:8117693-8117712	Msa0488400:intron	50.0%
	ATCAGTCTGTGGCGTCTACA+TGG	-	chr3_4:8117734-8117753	None:intergenic	50.0%
!	CATGACTTCTGGAGGGGAAT+TGG	+	chr3_4:8118066-8118085	Msa0488400:CDS	50.0%
	GCTTATCAGCAGCTTTGCAG+TGG	+	chr3_4:8118088-8118107	Msa0488400:CDS	50.0%
	AACTGGGTAACACCCTTGGT+TGG	+	chr3_4:8118973-8118992	Msa0488400:intron	50.0%
!	AGCATGTCTTTGGTGGTCAC+TGG	-	chr3_4:8119085-8119104	None:intergenic	50.0%
	CAACGCCTTATCCCACTAAG+TGG	+	chr3_4:8119225-8119244	Msa0488400:intron	50.0%
	ACGCCTTATCCCACTAAGTG+GGG	+	chr3_4:8119227-8119246	Msa0488400:intron	50.0%
	CTTATCCCACTAAGTGGGGT+CGG	+	chr3_4:8119231-8119250	Msa0488400:intron	50.0%
	TCTTCTTACCACGGCGTCTA+CGG	+	chr3_4:8119405-8119424	Msa0488400:intron	50.0%
	AGGATGTTGCGTTGGATGAG+TGG	-	chr3_4:8119550-8119569	None:intergenic	50.0%
!	AAGTAAGCGTAGCGGAGATG+AGG	-	chr3_4:8119570-8119589	None:intergenic	50.0%
	GTCAGACCGGCAATGTTGTA+TGG	-	chr3_4:8119631-8119650	None:intergenic	50.0%
	CCGCCTGAGTAGAAACAAGA+CGG	-	chr3_4:8119902-8119921	None:intergenic	50.0%
!!	CCGTCTTGTTTCTACTCAGG+CGG	+	chr3_4:8119899-8119918	Msa0488400:intron	50.0%
!	AGGCAAGCCTTAGAAGCGTA+CGG	-	chr3_4:8119928-8119947	None:intergenic	50.0%
	TAAACGGGAGGCTAGAGACT+TGG	-	chr3_4:8119951-8119970	None:intergenic	50.0%
	AGTCGAGGGAGGAGTTAAAC+GGG	-	chr3_4:8119966-8119985	None:intergenic	50.0%
	GAGTCGAGGGAGGAGTTAAA+CGG	-	chr3_4:8119967-8119986	None:intergenic	50.0%
!	AGTCTTGCTTGGTGAGTCGA+GGG	-	chr3_4:8119980-8119999	None:intergenic	50.0%
!	TAGTCTTGCTTGGTGAGTCG+AGG	-	chr3_4:8119981-8120000	None:intergenic	50.0%
	AAGGACTTAGGGTTGACCCT+TGG	+	chr3_4:8120082-8120101	Msa0488400:intron	50.0%
	AAGCCCCCTCATACATATCC+TGG	+	chr3_4:8120166-8120185	Msa0488400:intron	50.0%
	GAAAGCCCTGGAGAAGAAAG+GGG	-	chr3_4:8120217-8120236	None:intergenic	50.0%
	GGAAAGCCCTGGAGAAGAAA+GGG	-	chr3_4:8120218-8120237	None:intergenic	50.0%
	TGGAAAGCCCTGGAGAAGAA+AGG	-	chr3_4:8120219-8120238	None:intergenic	50.0%
!!	CAAGTGGTGTTGCTTGCAGT+TGG	+	chr3_4:8120468-8120487	Msa0488400:intron	50.0%
	TGGACACACTCATGCTCTGT+TGG	-	chr3_4:8120736-8120755	None:intergenic	50.0%
	TGGGACTGAAGAAGCAGAAG+CGG	+	chr3_4:8120780-8120799	Msa0488400:CDS	50.0%
	TGATGACCATGACAGCATCC+TGG	-	chr3_4:8120849-8120868	None:intergenic	50.0%
	TGGCAGGTGTTTACAACCAG+TGG	+	chr3_4:8120966-8120985	Msa0488400:three_prime_UTR	50.0%
!!!	GAAGGGTGCCGTTTTGGCAA+AGG	+	chr3_4:8116662-8116681	Msa0488400:five_prime_UTR	55.0%
	CTCGGGTTTATCTCCGGAAG+CGG	-	chr3_4:8117086-8117105	None:intergenic	55.0%
	GGAGGTCTCGGGTTTATCTC+CGG	-	chr3_4:8117092-8117111	None:intergenic	55.0%
	TACGGTGTAGGTAGCTCGGT+TGG	-	chr3_4:8117137-8117156	None:intergenic	55.0%
	GACAGCGAGAGAAGCCTAAC+CGG	+	chr3_4:8117523-8117542	Msa0488400:intron	55.0%
	GGCGTCTACATGGCACACAA+TGG	-	chr3_4:8117724-8117743	None:intergenic	55.0%
	CGACCCCACTTAGTGGGATA+AGG	-	chr3_4:8119233-8119252	None:intergenic	55.0%
	TGTAGCCGACCCCACTTAGT+GGG	-	chr3_4:8119239-8119258	None:intergenic	55.0%
	ATGTAGCCGACCCCACTTAG+TGG	-	chr3_4:8119240-8119259	None:intergenic	55.0%
	ACTAAGTGGGGTCGGCTACA+TGG	+	chr3_4:8119239-8119258	Msa0488400:intron	55.0%
	CTTCTTACCACGGCGTCTAC+GGG	+	chr3_4:8119406-8119425	Msa0488400:intron	55.0%
	CGGAGATGAGGATGTTGCGT+TGG	-	chr3_4:8119558-8119577	None:intergenic	55.0%
!!	GTATGGTACGGAGTGTTGGG+CGG	-	chr3_4:8119614-8119633	None:intergenic	55.0%
	CTATCGGACAGCAGTCAGAC+CGG	-	chr3_4:8119644-8119663	None:intergenic	55.0%
	GCGGAAACCGTACGCTTCTA+AGG	+	chr3_4:8119918-8119937	Msa0488400:intron	55.0%
	TAGTGTGAGGACGCAGGATG+GGG	-	chr3_4:8120142-8120161	None:intergenic	55.0%
	CTAGTGTGAGGACGCAGGAT+GGG	-	chr3_4:8120143-8120162	None:intergenic	55.0%
	ACTAGTGTGAGGACGCAGGA+TGG	-	chr3_4:8120144-8120163	None:intergenic	55.0%
	TTCGACTAGTGTGAGGACGC+AGG	-	chr3_4:8120148-8120167	None:intergenic	55.0%
	TCCTCACCCCTTTCTTCTCC+AGG	+	chr3_4:8120208-8120227	Msa0488400:intron	55.0%
	CCTCACCCCTTTCTTCTCCA+GGG	+	chr3_4:8120209-8120228	Msa0488400:intron	55.0%
	TGGCTTACCAGTCGTTCGGA+TGG	-	chr3_4:8120691-8120710	None:intergenic	55.0%
	AGGTGTCCAGGATGCTGTCA+TGG	+	chr3_4:8120840-8120859	Msa0488400:CDS	55.0%
	ACGGGAGGCTAGAGACTTGG+AGG	-	chr3_4:8119948-8119967	None:intergenic	60.0%
	CGAGGGAGGAGTTAAACGGG+AGG	-	chr3_4:8119963-8119982	None:intergenic	60.0%
!	CTTGCTTGGTGAGTCGAGGG+AGG	-	chr3_4:8119977-8119996	None:intergenic	60.0%
	AGGACGCAGGATGGGGATAC+CGG	-	chr3_4:8120135-8120154	None:intergenic	60.0%
	AGGGGGCTTCGACTAGTGTG+AGG	-	chr3_4:8120155-8120174	None:intergenic	60.0%
	CCCTGGAGAAGAAAGGGGTG+AGG	-	chr3_4:8120212-8120231	None:intergenic	60.0%
	GAGAAGACCCGTAGACGCCG+TGG	-	chr3_4:8119416-8119435	None:intergenic	65.0%
	GGGTCGGCCATCCGAACGAC+TGG	+	chr3_4:8120681-8120700	Msa0488400:CDS	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr3_4	gene	8116645	8121286	8116645	ID=Msa0488400;Name=Msa0488400
chr3_4	mRNA	8116645	8121286	8116645	ID=Msa0488400-mRNA-1;Parent=Msa0488400;Name=Msa0488400-mRNA-1;_AED=0.13;_eAED=0.13;_QI=88\|1\|1\|1\|1\|1\|4\|365\|205
chr3_4	exon	8116645	8116881	8116645	ID=Msa0488400-mRNA-1:exon:2736;Parent=Msa0488400-mRNA-1
chr3_4	exon	8118051	8118144	8118051	ID=Msa0488400-mRNA-1:exon:2737;Parent=Msa0488400-mRNA-1
chr3_4	exon	8118259	8118363	8118259	ID=Msa0488400-mRNA-1:exon:2738;Parent=Msa0488400-mRNA-1
chr3_4	exon	8120652	8121286	8120652	ID=Msa0488400-mRNA-1:exon:2739;Parent=Msa0488400-mRNA-1
chr3_4	five_prime_UTR	8116645	8116732	8116645	ID=Msa0488400-mRNA-1:five_prime_utr;Parent=Msa0488400-mRNA-1
chr3_4	CDS	8116733	8116881	8116733	ID=Msa0488400-mRNA-1:cds;Parent=Msa0488400-mRNA-1
chr3_4	CDS	8118051	8118144	8118051	ID=Msa0488400-mRNA-1:cds;Parent=Msa0488400-mRNA-1
chr3_4	CDS	8118259	8118363	8118259	ID=Msa0488400-mRNA-1:cds;Parent=Msa0488400-mRNA-1
chr3_4	CDS	8120652	8120921	8120652	ID=Msa0488400-mRNA-1:cds;Parent=Msa0488400-mRNA-1
chr3_4	three_prime_UTR	8120922	8121286	8120922	ID=Msa0488400-mRNA-1:three_prime_utr;Parent=Msa0488400-mRNA-1

Gene Sequence

>Msa0488400

ATGGAAGAAGATTTGGAATTTGGGAAGAAGGTTTCGATAAACGACGACACAATGGAAGTAGTAGTTGATTCCACCAAAATCGCTGTTTTGCTTCGTAGTTTTCTCGATATTCAACAACGCAGAGCTCAAGCTTATTCCAAACTCAAAAGTGGATTTTCTGACTACATGACTTCTGGAGGGGAATTGGCTTATCAGCAGCTTTGCAGTGGAATCACATCAGAGTTTAATGATTGCTCAAAAAAGGTCCGTGAAATGGAGTCGTTGTTTCAGAGCCCTGACTATAGCCGCATTGATCTAGCACAAATCCTTAGAGCTGTTCAAGAACAGGAAAAGCAGAAACTACATCTGACAGCTACCCTTCAGCTGTTAAAGAAAGCGGGTCGGCCATCCGAACGACTGGTAAGCCATGATAATTGCAAATTTACAAAGCCAACAGAGCATGAGTGTGTCCATGTTAAGGAGATCACTGAAGCTTCTGGGACTGAAGAAGCAGAAGCGGATGCCGAGTATGATAATGCTGTGAATGAAGCTATTAGAGGTGTCCAGGATGCTGTCATGGTCATCAATGAACATCTAGAAGAAGTCAGATATGAGATTGAAGCACTTGAAGCAGAGTAA

Protein sequence

>Msa0488400

MEEDLEFGKKVSINDDTMEVVVDSTKIAVLLRSFLDIQQRRAQAYSKLKSGFSDYMTSGGELAYQQLCSGITSEFNDCSKKVREMESLFQSPDYSRIDLAQILRAVQEQEKQKLHLTATLQLLKKAGRPSERLVSHDNCKFTKPTEHECVHVKEITEASGTEEAEADAEYDNAVNEAIRGVQDAVMVINEHLEEVRYEIEALEAE*