Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1392200 | KEH36340.1 | 93.431 | 137 | 8 | 1 | 1 | 136 | 1 | 137 | 9.57e-77 | 237 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1392200 | A0A072VDW6 | 93.431 | 137 | 8 | 1 | 1 | 136 | 1 | 137 | 4.57e-77 | 237 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002490 | Msa1392200 | 0.834793 | 2.440079e-56 | -8.615850e-47 |
| Msa0004860 | Msa1392200 | 0.800559 | 1.361687e-48 | -8.615850e-47 |
| Msa0015300 | Msa1392200 | 0.809465 | 1.867107e-50 | -8.615850e-47 |
| Msa0016670 | Msa1392200 | 0.836585 | 8.584805e-57 | -8.615850e-47 |
| Msa0017510 | Msa1392200 | 0.800106 | 1.684175e-48 | -8.615850e-47 |
| Msa0027260 | Msa1392200 | 0.822311 | 2.535554e-53 | -8.615850e-47 |
| Msa0032260 | Msa1392200 | 0.825378 | 4.842650e-54 | -8.615850e-47 |
| Msa0032580 | Msa1392200 | 0.823793 | 1.143769e-53 | -8.615850e-47 |
| Msa0032840 | Msa1392200 | -0.801468 | 8.877313e-49 | -8.615850e-47 |
| Msa0040690 | Msa1392200 | 0.804022 | 2.636641e-49 | -8.615850e-47 |
| Msa0046100 | Msa1392200 | 0.817220 | 3.691891e-52 | -8.615850e-47 |
| Msa0046750 | Msa1392200 | 0.829292 | 5.585592e-55 | -8.615850e-47 |
| Msa0052770 | Msa1392200 | 0.812765 | 3.595869e-51 | -8.615850e-47 |
| Msa0064350 | Msa1392200 | 0.830623 | 2.645748e-55 | -8.615850e-47 |
| Msa0064380 | Msa1392200 | 0.802625 | 5.132415e-49 | -8.615850e-47 |
| Msa0072810 | Msa1392200 | 0.813215 | 2.865271e-51 | -8.615850e-47 |
| Msa0074320 | Msa1392200 | 0.829115 | 6.166067e-55 | -8.615850e-47 |
| Msa0076000 | Msa1392200 | 0.809199 | 2.129393e-50 | -8.615850e-47 |
| Msa0082280 | Msa1392200 | 0.806270 | 8.923176e-50 | -8.615850e-47 |
| Msa0084650 | Msa1392200 | 0.838054 | 3.610859e-57 | -8.615850e-47 |
| Msa0090590 | Msa1392200 | 0.812736 | 3.648757e-51 | -8.615850e-47 |
| Msa0091570 | Msa1392200 | 0.802125 | 6.505967e-49 | -8.615850e-47 |
| Msa0094120 | Msa1392200 | 0.829100 | 6.217635e-55 | -8.615850e-47 |
| Msa0103000 | Msa1392200 | 0.822336 | 2.501473e-53 | -8.615850e-47 |
| Msa0107250 | Msa1392200 | 0.815748 | 7.887861e-52 | -8.615850e-47 |
| Msa0107280 | Msa1392200 | 0.810707 | 1.008031e-50 | -8.615850e-47 |
| Msa0110970 | Msa1392200 | 0.827624 | 1.411944e-54 | -8.615850e-47 |
| Msa0115270 | Msa1392200 | 0.829104 | 6.204100e-55 | -8.615850e-47 |
| Msa0115390 | Msa1392200 | 0.817709 | 2.865331e-52 | -8.615850e-47 |
| Msa0118400 | Msa1392200 | 0.808111 | 3.635868e-50 | -8.615850e-47 |
| Msa1346370 | Msa1392200 | 0.802753 | 4.830647e-49 | -8.615850e-47 |
| Msa1361520 | Msa1392200 | 0.810296 | 1.237157e-50 | -8.615850e-47 |
| Msa1363330 | Msa1392200 | 0.804244 | 2.370985e-49 | -8.615850e-47 |
| Msa1364910 | Msa1392200 | 0.808346 | 3.240355e-50 | -8.615850e-47 |
| Msa1370860 | Msa1392200 | 0.800615 | 1.326098e-48 | -8.615850e-47 |
| Msa1371430 | Msa1392200 | 0.818516 | 1.882332e-52 | -8.615850e-47 |
| Msa1374120 | Msa1392200 | 0.835055 | 2.096154e-56 | -8.615850e-47 |
| Msa1379760 | Msa1392200 | 0.809380 | 1.947242e-50 | -8.615850e-47 |
| Msa1382620 | Msa1392200 | 0.810241 | 1.270923e-50 | -8.615850e-47 |
| Msa1385770 | Msa1392200 | 0.828496 | 8.704977e-55 | -8.615850e-47 |
| Msa1386600 | Msa1392200 | 0.804603 | 1.995799e-49 | -8.615850e-47 |
| Msa1392200 | Msa1394500 | 0.800578 | 1.349773e-48 | -8.615850e-47 |
| Msa1392200 | Msa1397810 | 0.853699 | 2.010685e-61 | -8.615850e-47 |
| Msa1392200 | Msa1404010 | 0.838168 | 3.375652e-57 | -8.615850e-47 |
| Msa1392200 | Msa1404190 | 0.811501 | 6.784229e-51 | -8.615850e-47 |
| Msa1392200 | Msa1409240 | 0.826046 | 3.362229e-54 | -8.615850e-47 |
| Msa1392200 | Msa1415640 | 0.819333 | 1.227072e-52 | -8.615850e-47 |
| Msa1392200 | Msa1417870 | 0.819795 | 9.626530e-53 | -8.615850e-47 |
| Msa1392200 | Msa1426030 | 0.818173 | 2.250007e-52 | -8.615850e-47 |
| Msa1392200 | Msa1434140 | 0.830174 | 3.407770e-55 | -8.615850e-47 |
| Msa1392200 | Msa1442850 | 0.805517 | 1.285043e-49 | -8.615850e-47 |
| Msa1392200 | Msa1448690 | 0.820933 | 5.279290e-53 | -8.615850e-47 |
| Msa1392200 | Msa1453080 | 0.846063 | 2.748126e-59 | -8.615850e-47 |
| Msa1392200 | Msa1457440 | 0.812321 | 4.496991e-51 | -8.615850e-47 |
| Msa1392200 | Msa1464830 | 0.811108 | 8.254266e-51 | -8.615850e-47 |
| Msa1392200 | Msa1466300 | 0.811149 | 8.089892e-51 | -8.615850e-47 |
| Msa0607050 | Msa1392200 | 0.806904 | 6.559191e-50 | -8.615850e-47 |
| Msa0615870 | Msa1392200 | 0.812976 | 3.233263e-51 | -8.615850e-47 |
| Msa0616020 | Msa1392200 | 0.827292 | 1.696001e-54 | -8.615850e-47 |
| Msa0616160 | Msa1392200 | 0.808524 | 2.969640e-50 | -8.615850e-47 |
| Msa0621490 | Msa1392200 | 0.810505 | 1.115092e-50 | -8.615850e-47 |
| Msa0623700 | Msa1392200 | 0.850803 | 1.340306e-60 | -8.615850e-47 |
| Msa0627910 | Msa1392200 | 0.804146 | 2.484986e-49 | -8.615850e-47 |
| Msa0633400 | Msa1392200 | 0.808463 | 3.058619e-50 | -8.615850e-47 |
| Msa0657790 | Msa1392200 | 0.800386 | 1.476504e-48 | -8.615850e-47 |
| Msa0661620 | Msa1392200 | 0.919620 | 3.583995e-87 | -8.615850e-47 |
| Msa0677290 | Msa1392200 | 0.809537 | 1.801470e-50 | -8.615850e-47 |
| Msa0680240 | Msa1392200 | 0.823587 | 1.278564e-53 | -8.615850e-47 |
| Msa0682780 | Msa1392200 | 0.825594 | 4.304087e-54 | -8.615850e-47 |
| Msa0687630 | Msa1392200 | 0.817726 | 2.839205e-52 | -8.615850e-47 |
| Msa0688480 | Msa1392200 | 0.802807 | 4.708603e-49 | -8.615850e-47 |
| Msa0688960 | Msa1392200 | 0.803526 | 3.343002e-49 | -8.615850e-47 |
| Msa0689010 | Msa1392200 | 0.801938 | 7.110325e-49 | -8.615850e-47 |
| Msa0690160 | Msa1392200 | 0.812580 | 3.946668e-51 | -8.615850e-47 |
| Msa0691900 | Msa1392200 | 0.800813 | 1.208457e-48 | -8.615850e-47 |
| Msa0692080 | Msa1392200 | 0.814270 | 1.678256e-51 | -8.615850e-47 |
| Msa0692840 | Msa1392200 | 0.803624 | 3.189433e-49 | -8.615850e-47 |
| Msa0692940 | Msa1392200 | 0.803534 | 3.330592e-49 | -8.615850e-47 |
| Msa0696450 | Msa1392200 | 0.825620 | 4.244937e-54 | -8.615850e-47 |
| Msa0696620 | Msa1392200 | 0.817684 | 2.903065e-52 | -8.615850e-47 |
| Msa0698660 | Msa1392200 | 0.803483 | 3.411662e-49 | -8.615850e-47 |
| Msa0703230 | Msa1392200 | 0.828034 | 1.125204e-54 | -8.615850e-47 |
| Msa0709500 | Msa1392200 | 0.815028 | 1.140216e-51 | -8.615850e-47 |
| Msa0734660 | Msa1392200 | 0.815195 | 1.046950e-51 | -8.615850e-47 |
| Msa0738630 | Msa1392200 | -0.805283 | 1.438602e-49 | -8.615850e-47 |
| Msa0743720 | Msa1392200 | 0.812107 | 5.007280e-51 | -8.615850e-47 |
| Msa0763070 | Msa1392200 | 0.801706 | 7.935041e-49 | -8.615850e-47 |
| Msa0776220 | Msa1392200 | 0.828671 | 7.897356e-55 | -8.615850e-47 |
| Msa0783760 | Msa1392200 | -0.810268 | 1.254340e-50 | -8.615850e-47 |
| Msa0790850 | Msa1392200 | 0.815854 | 7.467350e-52 | -8.615850e-47 |
| Msa0808270 | Msa1392200 | 0.812534 | 4.039028e-51 | -8.615850e-47 |
| Msa0812570 | Msa1392200 | 0.809094 | 2.242194e-50 | -8.615850e-47 |
| Msa0813670 | Msa1392200 | 0.810896 | 9.177586e-51 | -8.615850e-47 |
| Msa0813720 | Msa1392200 | 0.832096 | 1.148537e-55 | -8.615850e-47 |
| Msa0818980 | Msa1392200 | -0.809071 | 2.267581e-50 | -8.615850e-47 |
| Msa0819030 | Msa1392200 | -0.822166 | 2.739547e-53 | -8.615850e-47 |
| Msa0831870 | Msa1392200 | 0.820744 | 5.834287e-53 | -8.615850e-47 |
| Msa0833310 | Msa1392200 | 0.821712 | 3.490014e-53 | -8.615850e-47 |
| Msa0837660 | Msa1392200 | 0.816059 | 6.722022e-52 | -8.615850e-47 |
| Msa0127310 | Msa1392200 | 0.838087 | 3.542422e-57 | -8.615850e-47 |
| Msa0128860 | Msa1392200 | 0.800808 | 1.211537e-48 | -8.615850e-47 |
| Msa0140570 | Msa1392200 | 0.818365 | 2.036134e-52 | -8.615850e-47 |
| Msa0140650 | Msa1392200 | 0.807080 | 6.019829e-50 | -8.615850e-47 |
| Msa0143430 | Msa1392200 | 0.830122 | 3.508113e-55 | -8.615850e-47 |
| Msa0147560 | Msa1392200 | 0.821117 | 4.786956e-53 | -8.615850e-47 |
| Msa0165220 | Msa1392200 | 0.813718 | 2.221667e-51 | -8.615850e-47 |
| Msa0172970 | Msa1392200 | 0.818560 | 1.839269e-52 | -8.615850e-47 |
| Msa0173740 | Msa1392200 | 0.800584 | 1.345690e-48 | -8.615850e-47 |
| Msa0173820 | Msa1392200 | 0.802119 | 6.526781e-49 | -8.615850e-47 |
| Msa0174730 | Msa1392200 | 0.801285 | 9.675718e-49 | -8.615850e-47 |
| Msa0183830 | Msa1392200 | 0.807558 | 4.765886e-50 | -8.615850e-47 |
| Msa0186890 | Msa1392200 | 0.826533 | 2.574759e-54 | -8.615850e-47 |
| Msa0187690 | Msa1392200 | 0.829236 | 5.764472e-55 | -8.615850e-47 |
| Msa0187930 | Msa1392200 | 0.816089 | 6.618824e-52 | -8.615850e-47 |
| Msa0191050 | Msa1392200 | 0.834407 | 3.052124e-56 | -8.615850e-47 |
| Msa0193120 | Msa1392200 | 0.833298 | 5.777872e-56 | -8.615850e-47 |
| Msa0194480 | Msa1392200 | 0.820652 | 6.125137e-53 | -8.615850e-47 |
| Msa0194540 | Msa1392200 | 0.814994 | 1.160477e-51 | -8.615850e-47 |
| Msa0199690 | Msa1392200 | 0.824520 | 7.720232e-54 | -8.615850e-47 |
| Msa0199880 | Msa1392200 | 0.831257 | 1.849708e-55 | -8.615850e-47 |
| Msa0203310 | Msa1392200 | 0.805360 | 1.386159e-49 | -8.615850e-47 |
| Msa0225740 | Msa1392200 | 0.837904 | 3.947299e-57 | -8.615850e-47 |
| Msa0231880 | Msa1392200 | 0.829844 | 4.101436e-55 | -8.615850e-47 |
| Msa0233350 | Msa1392200 | 0.836656 | 8.234763e-57 | -8.615850e-47 |
| Msa0236270 | Msa1392200 | 0.806241 | 9.049436e-50 | -8.615850e-47 |
| Msa1236100 | Msa1392200 | 0.811644 | 6.313816e-51 | -8.615850e-47 |
| Msa1239740 | Msa1392200 | 0.809102 | 2.234029e-50 | -8.615850e-47 |
| Msa1249870 | Msa1392200 | 0.808015 | 3.811741e-50 | -8.615850e-47 |
| Msa1251730 | Msa1392200 | 0.801153 | 1.029776e-48 | -8.615850e-47 |
| Msa1254610 | Msa1392200 | 0.804260 | 2.352380e-49 | -8.615850e-47 |
| Msa1257510 | Msa1392200 | 0.801105 | 1.053373e-48 | -8.615850e-47 |
| Msa1264020 | Msa1392200 | 0.803875 | 2.829336e-49 | -8.615850e-47 |
| Msa1269300 | Msa1392200 | 0.804560 | 2.037276e-49 | -8.615850e-47 |
| Msa1275360 | Msa1392200 | 0.847544 | 1.081714e-59 | -8.615850e-47 |
| Msa1275540 | Msa1392200 | 0.801908 | 7.212726e-49 | -8.615850e-47 |
| Msa1279380 | Msa1392200 | 0.802049 | 6.746984e-49 | -8.615850e-47 |
| Msa1281190 | Msa1392200 | 0.819603 | 1.065007e-52 | -8.615850e-47 |
| Msa1283170 | Msa1392200 | 0.823817 | 1.129055e-53 | -8.615850e-47 |
| Msa1292830 | Msa1392200 | 0.806391 | 8.414541e-50 | -8.615850e-47 |
| Msa1304820 | Msa1392200 | 0.847945 | 8.388979e-60 | -8.615850e-47 |
| Msa1306430 | Msa1392200 | 0.815125 | 1.085285e-51 | -8.615850e-47 |
| Msa1307950 | Msa1392200 | 0.818381 | 2.019015e-52 | -8.615850e-47 |
| Msa1316780 | Msa1392200 | 0.817643 | 2.964067e-52 | -8.615850e-47 |
| Msa1316830 | Msa1392200 | 0.823807 | 1.135437e-53 | -8.615850e-47 |
| Msa1321630 | Msa1392200 | 0.801192 | 1.011191e-48 | -8.615850e-47 |
| Msa1333110 | Msa1392200 | 0.818506 | 1.891838e-52 | -8.615850e-47 |
| Msa0366890 | Msa1392200 | 0.825885 | 3.672195e-54 | -8.615850e-47 |
| Msa0369050 | Msa1392200 | 0.844676 | 6.522391e-59 | -8.615850e-47 |
| Msa0369220 | Msa1392200 | 0.821043 | 4.980934e-53 | -8.615850e-47 |
| Msa0376690 | Msa1392200 | 0.809308 | 2.017526e-50 | -8.615850e-47 |
| Msa0385580 | Msa1392200 | 0.813846 | 2.081485e-51 | -8.615850e-47 |
| Msa0398730 | Msa1392200 | 0.804091 | 2.550580e-49 | -8.615850e-47 |
| Msa0398950 | Msa1392200 | 0.809435 | 1.895079e-50 | -8.615850e-47 |
| Msa0402330 | Msa1392200 | 0.846109 | 2.669056e-59 | -8.615850e-47 |
| Msa0414800 | Msa1392200 | 0.815428 | 9.292770e-52 | -8.615850e-47 |
| Msa0414950 | Msa1392200 | -0.810561 | 1.084096e-50 | -8.615850e-47 |
| Msa0419820 | Msa1392200 | 0.801530 | 8.621380e-49 | -8.615850e-47 |
| Msa0425010 | Msa1392200 | 0.817050 | 4.031537e-52 | -8.615850e-47 |
| Msa0425220 | Msa1392200 | 0.809215 | 2.112521e-50 | -8.615850e-47 |
| Msa0425940 | Msa1392200 | 0.802059 | 6.714889e-49 | -8.615850e-47 |
| Msa0432770 | Msa1392200 | 0.806299 | 8.799698e-50 | -8.615850e-47 |
| Msa0436050 | Msa1392200 | 0.941887 | 1.896546e-101 | -8.615850e-47 |
| Msa0436490 | Msa1392200 | -0.801829 | 7.484053e-49 | -8.615850e-47 |
| Msa0441130 | Msa1392200 | 0.828771 | 7.471559e-55 | -8.615850e-47 |
| Msa0458060 | Msa1392200 | 0.813763 | 2.171174e-51 | -8.615850e-47 |
| Msa0469030 | Msa1392200 | 0.823044 | 1.711450e-53 | -8.615850e-47 |
| Msa0471590 | Msa1392200 | 0.808142 | 3.581588e-50 | -8.615850e-47 |
| Msa0480000 | Msa1392200 | 0.811540 | 6.653776e-51 | -8.615850e-47 |
| Msa0994630 | Msa1392200 | 0.811701 | 6.137130e-51 | -8.615850e-47 |
| Msa1012320 | Msa1392200 | 0.806557 | 7.765033e-50 | -8.615850e-47 |
| Msa1012700 | Msa1392200 | 0.812433 | 4.251095e-51 | -8.615850e-47 |
| Msa1013400 | Msa1392200 | 0.822017 | 2.965607e-53 | -8.615850e-47 |
| Msa1023400 | Msa1392200 | 0.814104 | 1.825791e-51 | -8.615850e-47 |
| Msa1037420 | Msa1392200 | 0.807447 | 5.033255e-50 | -8.615850e-47 |
| Msa1040400 | Msa1392200 | 0.821563 | 3.778087e-53 | -8.615850e-47 |
| Msa1040830 | Msa1392200 | 0.823687 | 1.210982e-53 | -8.615850e-47 |
| Msa1043690 | Msa1392200 | 0.817571 | 3.077025e-52 | -8.615850e-47 |
| Msa1046020 | Msa1392200 | 0.817945 | 2.533500e-52 | -8.615850e-47 |
| Msa1046060 | Msa1392200 | 0.819463 | 1.146165e-52 | -8.615850e-47 |
| Msa1066490 | Msa1392200 | 0.812883 | 3.388925e-51 | -8.615850e-47 |
| Msa1074810 | Msa1392200 | 0.802294 | 6.005960e-49 | -8.615850e-47 |
| Msa1081150 | Msa1392200 | 0.826952 | 2.045568e-54 | -8.615850e-47 |
| Msa1082700 | Msa1392200 | 0.831721 | 1.421315e-55 | -8.615850e-47 |
| Msa1083150 | Msa1392200 | 0.803742 | 3.015361e-49 | -8.615850e-47 |
| Msa1093530 | Msa1392200 | 0.814527 | 1.472058e-51 | -8.615850e-47 |
| Msa1094420 | Msa1392200 | 0.820823 | 5.593868e-53 | -8.615850e-47 |
| Msa1104140 | Msa1392200 | 0.805091 | 1.577674e-49 | -8.615850e-47 |
| Msa1106700 | Msa1392200 | 0.812482 | 4.146738e-51 | -8.615850e-47 |
| Msa0241780 | Msa1392200 | 0.813357 | 2.666258e-51 | -8.615850e-47 |
| Msa0242230 | Msa1392200 | 0.839716 | 1.341394e-57 | -8.615850e-47 |
| Msa0242410 | Msa1392200 | 0.820872 | 5.452466e-53 | -8.615850e-47 |
| Msa0244780 | Msa1392200 | 0.813238 | 2.831577e-51 | -8.615850e-47 |
| Msa0262310 | Msa1392200 | 0.833416 | 5.399324e-56 | -8.615850e-47 |
| Msa0264570 | Msa1392200 | 0.851560 | 8.194603e-61 | -8.615850e-47 |
| Msa0267220 | Msa1392200 | 0.801593 | 8.370727e-49 | -8.615850e-47 |
| Msa0267970 | Msa1392200 | 0.813555 | 2.412314e-51 | -8.615850e-47 |
| Msa0268130 | Msa1392200 | 0.823873 | 1.095571e-53 | -8.615850e-47 |
| Msa0273900 | Msa1392200 | 0.804230 | 2.386784e-49 | -8.615850e-47 |
| Msa0279790 | Msa1392200 | 0.806017 | 1.008665e-49 | -8.615850e-47 |
| Msa0280610 | Msa1392200 | 0.811032 | 8.573112e-51 | -8.615850e-47 |
| Msa0298700 | Msa1392200 | 0.829407 | 5.238368e-55 | -8.615850e-47 |
| Msa0298990 | Msa1392200 | 0.823796 | 1.142280e-53 | -8.615850e-47 |
| Msa0304590 | Msa1392200 | 0.802163 | 6.390569e-49 | -8.615850e-47 |
| Msa0309770 | Msa1392200 | 0.803341 | 3.651368e-49 | -8.615850e-47 |
| Msa0314720 | Msa1392200 | 0.823242 | 1.539526e-53 | -8.615850e-47 |
| Msa0317250 | Msa1392200 | 0.807970 | 3.896250e-50 | -8.615850e-47 |
| Msa0322890 | Msa1392200 | 0.807284 | 5.448741e-50 | -8.615850e-47 |
| Msa0323610 | Msa1392200 | 0.806648 | 7.428813e-50 | -8.615850e-47 |
| Msa0337650 | Msa1392200 | 0.825159 | 5.457133e-54 | -8.615850e-47 |
| Msa0355270 | Msa1392200 | 0.850562 | 1.567534e-60 | -8.615850e-47 |
| Msa1109570 | Msa1392200 | 0.802809 | 4.702967e-49 | -8.615850e-47 |
| Msa1124110 | Msa1392200 | 0.805454 | 1.324728e-49 | -8.615850e-47 |
| Msa1126510 | Msa1392200 | 0.846415 | 2.203510e-59 | -8.615850e-47 |
| Msa1126770 | Msa1392200 | 0.836427 | 9.417964e-57 | -8.615850e-47 |
| Msa1127890 | Msa1392200 | 0.829316 | 5.510939e-55 | -8.615850e-47 |
| Msa1134110 | Msa1392200 | 0.849271 | 3.599846e-60 | -8.615850e-47 |
| Msa1139810 | Msa1392200 | 0.800705 | 1.271306e-48 | -8.615850e-47 |
| Msa1143840 | Msa1392200 | 0.811037 | 8.555481e-51 | -8.615850e-47 |
| Msa1165870 | Msa1392200 | 0.820200 | 7.777036e-53 | -8.615850e-47 |
| Msa1166330 | Msa1392200 | 0.805522 | 1.281687e-49 | -8.615850e-47 |
| Msa1166340 | Msa1392200 | 0.807928 | 3.977863e-50 | -8.615850e-47 |
| Msa1166860 | Msa1392200 | 0.852055 | 5.933228e-61 | -8.615850e-47 |
| Msa1168950 | Msa1392200 | 0.801553 | 8.528277e-49 | -8.615850e-47 |
| Msa1171360 | Msa1392200 | 0.815869 | 7.409609e-52 | -8.615850e-47 |
| Msa1171870 | Msa1392200 | 0.821516 | 3.873740e-53 | -8.615850e-47 |
| Msa1173140 | Msa1392200 | 0.810956 | 8.908311e-51 | -8.615850e-47 |
| Msa1181830 | Msa1392200 | 0.803875 | 2.829301e-49 | -8.615850e-47 |
| Msa1181850 | Msa1392200 | 0.846572 | 1.996953e-59 | -8.615850e-47 |
| Msa1181860 | Msa1392200 | 0.852846 | 3.530094e-61 | -8.615850e-47 |
| Msa1187840 | Msa1392200 | 0.827873 | 1.230123e-54 | -8.615850e-47 |
| Msa1203250 | Msa1392200 | 0.804122 | 2.513929e-49 | -8.615850e-47 |
| Msa1204250 | Msa1392200 | 0.818714 | 1.697011e-52 | -8.615850e-47 |
| Msa1207270 | Msa1392200 | 0.810070 | 1.383666e-50 | -8.615850e-47 |
| Msa1209460 | Msa1392200 | 0.815086 | 1.107089e-51 | -8.615850e-47 |
| Msa1218600 | Msa1392200 | 0.811176 | 7.980534e-51 | -8.615850e-47 |
| Msa0508590 | Msa1392200 | 0.853472 | 2.336078e-61 | -8.615850e-47 |
| Msa0508630 | Msa1392200 | 0.861291 | 1.137495e-63 | -8.615850e-47 |
| Msa0508870 | Msa1392200 | 0.806583 | 7.667573e-50 | -8.615850e-47 |
| Msa0509390 | Msa1392200 | 0.813390 | 2.622517e-51 | -8.615850e-47 |
| Msa0510350 | Msa1392200 | 0.815103 | 1.097395e-51 | -8.615850e-47 |
| Msa0510970 | Msa1392200 | 0.816136 | 6.461578e-52 | -8.615850e-47 |
| Msa0516320 | Msa1392200 | 0.821837 | 3.264648e-53 | -8.615850e-47 |
| Msa0521500 | Msa1392200 | 0.809077 | 2.260968e-50 | -8.615850e-47 |
| Msa0521880 | Msa1392200 | 0.816681 | 4.877512e-52 | -8.615850e-47 |
| Msa0526540 | Msa1392200 | 0.803152 | 3.995434e-49 | -8.615850e-47 |
| Msa0541860 | Msa1392200 | 0.829560 | 4.806785e-55 | -8.615850e-47 |
| Msa0547140 | Msa1392200 | 0.806711 | 7.202317e-50 | -8.615850e-47 |
| Msa0552810 | Msa1392200 | 0.804224 | 2.393710e-49 | -8.615850e-47 |
| Msa0565960 | Msa1392200 | 0.818108 | 2.328463e-52 | -8.615850e-47 |
| Msa0576940 | Msa1392200 | 0.807319 | 5.355771e-50 | -8.615850e-47 |
| Msa0578040 | Msa1392200 | 0.821399 | 4.121973e-53 | -8.615850e-47 |
| Msa0581070 | Msa1392200 | 0.807865 | 4.101937e-50 | -8.615850e-47 |
| Msa0591060 | Msa1392200 | 0.803837 | 2.880413e-49 | -8.615850e-47 |
| Msa0593650 | Msa1392200 | 0.823894 | 1.083021e-53 | -8.615850e-47 |
| Msa0601850 | Msa1392200 | 0.800789 | 1.222121e-48 | -8.615850e-47 |
| Msa0602310 | Msa1392200 | 0.813838 | 2.089527e-51 | -8.615850e-47 |
| Msa0602390 | Msa1392200 | 0.804972 | 1.671254e-49 | -8.615850e-47 |
| Msa0847080 | Msa1392200 | 0.807929 | 3.974825e-50 | -8.615850e-47 |
| Msa0850960 | Msa1392200 | 0.824809 | 6.599177e-54 | -8.615850e-47 |
| Msa0871270 | Msa1392200 | 0.802708 | 4.934167e-49 | -8.615850e-47 |
| Msa0876200 | Msa1392200 | 0.838496 | 2.779073e-57 | -8.615850e-47 |
| Msa0878500 | Msa1392200 | 0.826904 | 2.100196e-54 | -8.615850e-47 |
| Msa0888530 | Msa1392200 | 0.812927 | 3.313283e-51 | -8.615850e-47 |
| Msa0888580 | Msa1392200 | 0.821375 | 4.175024e-53 | -8.615850e-47 |
| Msa0902760 | Msa1392200 | 0.817209 | 3.713523e-52 | -8.615850e-47 |
| Msa0925440 | Msa1392200 | 0.801948 | 7.076511e-49 | -8.615850e-47 |
| Msa0938220 | Msa1392200 | 0.807750 | 4.340411e-50 | -8.615850e-47 |
| Msa0944190 | Msa1392200 | 0.847356 | 1.217829e-59 | -8.615850e-47 |
| Msa0945970 | Msa1392200 | 0.819630 | 1.049838e-52 | -8.615850e-47 |
| Msa0946320 | Msa1392200 | 0.806959 | 6.384061e-50 | -8.615850e-47 |
| Msa0953150 | Msa1392200 | 0.814914 | 1.208606e-51 | -8.615850e-47 |
| Msa0968590 | Msa1392200 | 0.828860 | 7.108439e-55 | -8.615850e-47 |
| Msa0974810 | Msa1392200 | 0.801724 | 7.866629e-49 | -8.615850e-47 |
| Msa0979010 | Msa1392200 | 0.805152 | 1.532379e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1392200 | MtrunA17_Chr3g0144051 | 91.667 | 132 | 10 | 1 | 1 | 131 | 1 | 132 | 7.61e-74 | 219 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1392200 | AT1G20770.1 | 57.143 | 84 | 31 | 2 | 22 | 101 | 30 | 112 | 1.24e-27 | 102 |
| Msa1392200 | AT1G20770.2 | 57.143 | 84 | 31 | 2 | 22 | 101 | 30 | 112 | 4.30e-27 | 99.8 |
Find 59 sgRNAs with CRISPR-Local
Find 200 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAAGTCGCTTTGCAATTTA+TGG | 0.047989 | tig0021477:+17065 | Msa1392200:CDS |
| GCGCGTTAATAGTTCTTTAT+TGG | 0.185278 | tig0021477:+17453 | Msa1392200:CDS |
| TGTAATTTCAACTTTATATC+AGG | 0.192109 | tig0021477:+17940 | Msa1392200:three_prime_UTR |
| TCTTCTAATTTAGTACTTTC+AGG | 0.205802 | tig0021477:-17752 | None:intergenic |
| ATTGCTACTTCTTCATTCTT+TGG | 0.255169 | tig0021477:-18855 | None:intergenic |
| AGCTAGTGCTAGATATTCTA+TGG | 0.274041 | tig0021477:+17423 | Msa1392200:CDS |
| GTCAATGGGGAAAACATATT+TGG | 0.285598 | tig0021477:-17841 | None:intergenic |
| CACACTTCACGTTGCAGAAA+TGG | 0.314124 | tig0021477:+17711 | Msa1392200:CDS |
| GACCGAGCATTGCAAGATTT+TGG | 0.314762 | tig0021477:+20098 | Msa1392200:three_prime_UTR |
| GTTGGGTCGCACGAAGCTTT+GGG | 0.323316 | tig0021477:-18620 | None:intergenic |
| TCCTGTTAAGTTCTCTGTTA+TGG | 0.337078 | tig0021477:-18086 | None:intergenic |
| AGTTGGGTCGCACGAAGCTT+TGG | 0.351397 | tig0021477:-18621 | None:intergenic |
| GAGAAGAGAGGTTTGTTTGA+AGG | 0.357896 | tig0021477:+17011 | Msa1392200:CDS |
| TTGCATTATGTTCAGAAGAT+AGG | 0.359977 | tig0021477:-17892 | None:intergenic |
| CTCCATTTGTGATGCCGCTC+TGG | 0.374189 | tig0021477:-20066 | None:intergenic |
| AGAAGAGAGGTTTGTTTGAA+GGG | 0.396297 | tig0021477:+17012 | Msa1392200:CDS |
| ACCATAACAGAGAACTTAAC+AGG | 0.406915 | tig0021477:+18085 | Msa1392200:three_prime_UTR |
| CTTCCACCTCTTGATGAAGT+TGG | 0.430151 | tig0021477:-18829 | None:intergenic |
| GAAGAAGTAGCAATTCCTTC+AGG | 0.432477 | tig0021477:+18864 | Msa1392200:three_prime_UTR |
| TATCGATGCCAGCAGTCAAT+GGG | 0.440676 | tig0021477:-17855 | None:intergenic |
| ACACTTCACGTTGCAGAAAT+GGG | 0.458799 | tig0021477:+17712 | Msa1392200:CDS |
| AGACCAAATGAAAAGTTTCT+CGG | 0.463551 | tig0021477:+20141 | Msa1392200:three_prime_UTR |
| AGTAATAGTATGAAATCATC+TGG | 0.464799 | tig0021477:+17797 | Msa1392200:CDS |
| ATATTCATCACAGGGATGGC+TGG | 0.466276 | tig0021477:+17396 | Msa1392200:intron |
| CTATCGATGCCAGCAGTCAA+TGG | 0.475477 | tig0021477:-17856 | None:intergenic |
| TGCCAGAGCGGCATCACAAA+TGG | 0.476797 | tig0021477:+20064 | Msa1392200:three_prime_UTR |
| AATCTCAAGTTGAATCAAGT+TGG | 0.477106 | tig0021477:+20240 | Msa1392200:three_prime_UTR |
| GCTGGCATCGATAGTGTAAA+GGG | 0.480873 | tig0021477:+17865 | Msa1392200:three_prime_UTR |
| ACCTTTCTCAAATGACAGTT+GGG | 0.486844 | tig0021477:-18637 | None:intergenic |
| CACCTTTCTCAAATGACAGT+TGG | 0.489015 | tig0021477:-18638 | None:intergenic |
| ATCCCGAAAATCATAGTGAA+TGG | 0.490710 | tig0021477:+16981 | Msa1392200:exon |
| GTAATTTCAACTTTATATCA+GGG | 0.501664 | tig0021477:+17941 | Msa1392200:three_prime_UTR |
| CACCAAAATCTTGCAATGCT+CGG | 0.503585 | tig0021477:-20100 | None:intergenic |
| TGCTGGCATCGATAGTGTAA+AGG | 0.510744 | tig0021477:+17864 | Msa1392200:three_prime_UTR |
| TAGCAGCTGAATGGAATTTG+AGG | 0.516503 | tig0021477:-17477 | None:intergenic |
| TGGAGGAGAGAGAATCGGAA+AGG | 0.522502 | tig0021477:-17110 | None:intergenic |
| TCAATGTTGTAGCAGCTGAA+TGG | 0.524811 | tig0021477:-17486 | None:intergenic |
| TCTCTCCTCCACACTTCGAC+AGG | 0.526939 | tig0021477:+17122 | Msa1392200:CDS |
| GGAGGAGAGAGAATCGGAAA+GGG | 0.529857 | tig0021477:-17109 | None:intergenic |
| ATACTACTAAAAGCATATAG+TGG | 0.535069 | tig0021477:-18014 | None:intergenic |
| AAGTGTGGAGGAGAGAGAAT+CGG | 0.545779 | tig0021477:-17115 | None:intergenic |
| ATAGTGGCAAAATCATATTA+CGG | 0.550281 | tig0021477:-17998 | None:intergenic |
| TTGGGTCGCACGAAGCTTTG+GGG | 0.558578 | tig0021477:-18619 | None:intergenic |
| AATGGAAGAAGAGAGAAGAG+AGG | 0.571337 | tig0021477:+16999 | Msa1392200:exon |
| ACTTTCAGGTTCGTGTTCAG+AGG | 0.572436 | tig0021477:-17738 | None:intergenic |
| ACCCAACTGTCATTTGAGAA+AGG | 0.572755 | tig0021477:+18636 | Msa1392200:three_prime_UTR |
| AGACAAGAATGAGCAGCCAC+AGG | 0.580041 | tig0021477:+17772 | Msa1392200:CDS |
| TTCATACTATTACTATCCTG+TGG | 0.594361 | tig0021477:-17788 | None:intergenic |
| AAGATATCCGAAAATCAAGA+TGG | 0.595526 | tig0021477:+17508 | Msa1392200:CDS |
| CTACAAACAGTGTAAAAGTG+TGG | 0.621576 | tig0021477:+16930 | None:intergenic |
| GCTAGTGCTAGATATTCTAT+GGG | 0.628225 | tig0021477:+17424 | Msa1392200:CDS |
| TAACCAACTTCATCAAGAGG+TGG | 0.630984 | tig0021477:+18826 | Msa1392200:three_prime_UTR |
| CATTTCTGCAACGTGAAGTG+TGG | 0.652174 | tig0021477:-17710 | None:intergenic |
| GTAAAAGTGTGGAAATCTAG+CGG | 0.657247 | tig0021477:+16941 | Msa1392200:five_prime_UTR |
| TGTATGTACCTGTCGAAGTG+TGG | 0.657763 | tig0021477:-17130 | None:intergenic |
| CTGGCATCGATAGTGTAAAG+GGG | 0.665023 | tig0021477:+17866 | Msa1392200:three_prime_UTR |
| TGGCATCGATAGTGTAAAGG+GGG | 0.684960 | tig0021477:+17867 | Msa1392200:three_prime_UTR |
| ATCGATGCCAGCAGTCAATG+GGG | 0.713158 | tig0021477:-17854 | None:intergenic |
| ATGTACCTGTCGAAGTGTGG+AGG | 0.713176 | tig0021477:-17127 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTAATAATAACCTTT+TGG | + | tig0021477:18357-18376 | Msa1392200:intron | 10.0% |
| !!! | ACATTTACAATATTTTTTTA+CGG | + | tig0021477:19643-19662 | Msa1392200:intron | 10.0% |
| !! | ATTTAAAAAGATAAGTTATT+GGG | + | tig0021477:19962-19981 | Msa1392200:intron | 10.0% |
| !!! | AATTTTGTCTTTTATAGTTA+AGG | + | tig0021477:17533-17552 | Msa1392200:intron | 15.0% |
| !!! | AGATTCTTTTAAAAAGATAA+TGG | + | tig0021477:18168-18187 | Msa1392200:intron | 15.0% |
| !!! | TTTAACAAAAGATCTTTTAA+AGG | + | tig0021477:18252-18271 | Msa1392200:intron | 15.0% |
| !!! | AACATAATTAGTTTTTACAT+AGG | + | tig0021477:19152-19171 | Msa1392200:intron | 15.0% |
| !!! | CATTTACAATATTTTTTTAC+GGG | + | tig0021477:19644-19663 | Msa1392200:intron | 15.0% |
| !! | GATTTAAAAAGATAAGTTAT+TGG | + | tig0021477:19961-19980 | Msa1392200:intron | 15.0% |
| !!! | AATTTCTTATTCTTTTATTC+AGG | + | tig0021477:20040-20059 | Msa1392200:intron | 15.0% |
| !!! | TTTTTTCAGTTTATTACTTT+TGG | + | tig0021477:20275-20294 | Msa1392200:three_prime_UTR | 15.0% |
| !!! | AAATTTACCATCTTGATTTT+CGG | - | tig0021477:17518-17537 | None:intergenic | 20.0% |
| !! | TGTAATTTCAACTTTATATC+AGG | + | tig0021477:17940-17959 | Msa1392200:three_prime_UTR | 20.0% |
| !! | GTAATTTCAACTTTATATCA+GGG | + | tig0021477:17941-17960 | Msa1392200:three_prime_UTR | 20.0% |
| !! | TTCAAAAGAGCTATAATAAA+CGG | - | tig0021477:18196-18215 | None:intergenic | 20.0% |
| !!! | TTTAAGTATTTTCATCCTTT+TGG | + | tig0021477:18323-18342 | Msa1392200:intron | 20.0% |
| !! | AAAAAAAAAGTTGTACCAAA+AGG | - | tig0021477:18341-18360 | None:intergenic | 20.0% |
| !! | TTGAATTACTGTTAAAATCT+TGG | + | tig0021477:18535-18554 | Msa1392200:intron | 20.0% |
| !!! | ATGTTTGATTTTAAGCAAAA+AGG | - | tig0021477:19137-19156 | None:intergenic | 20.0% |
| !! | AATAACTTTATACAACACTT+TGG | - | tig0021477:19259-19278 | None:intergenic | 20.0% |
| !! | ATAAAGTTATTCTTCAAAAC+AGG | + | tig0021477:19268-19287 | Msa1392200:intron | 20.0% |
| !! | AAAAAAAAATACATAGGCTT+GGG | - | tig0021477:19403-19422 | None:intergenic | 20.0% |
| !! | TAAAAAAAAATACATAGGCT+TGG | - | tig0021477:19404-19423 | None:intergenic | 20.0% |
| !!! | GCCTATGTATTTTTTTTTAA+TGG | + | tig0021477:19405-19424 | Msa1392200:intron | 20.0% |
| !! | GCCATTAAAAAAAAATACAT+AGG | - | tig0021477:19409-19428 | None:intergenic | 20.0% |
| !!! | TTTTTTTTAATGGCAAATGT+TGG | + | tig0021477:19415-19434 | Msa1392200:intron | 20.0% |
| !! | AATTACAGGAATTTAATTCA+AGG | - | tig0021477:19851-19870 | None:intergenic | 20.0% |
| !! | TTGAATTAAATTCCTGTAAT+TGG | + | tig0021477:19850-19869 | Msa1392200:intron | 20.0% |
| !! | TGAATTAAATTCCTGTAATT+GGG | + | tig0021477:19851-19870 | Msa1392200:intron | 20.0% |
| ! | GAATTTGATTAGGTTATGTA+TGG | - | tig0021477:17161-17180 | None:intergenic | 25.0% |
| ! | GAGTTGAATTGAATTTGATT+AGG | - | tig0021477:17171-17190 | None:intergenic | 25.0% |
| ! | AATAAGCTGAAAACAACTTA+TGG | + | tig0021477:17297-17316 | Msa1392200:intron | 25.0% |
| ! | TGTGATGAATATCTTAAAGA+AGG | - | tig0021477:17388-17407 | None:intergenic | 25.0% |
| !!! | TTCTTTAAGATATTCATCAC+AGG | + | tig0021477:17387-17406 | Msa1392200:intron | 25.0% |
| !!! | TCTTTAAGATATTCATCACA+GGG | + | tig0021477:17388-17407 | Msa1392200:intron | 25.0% |
| ! | GTACATGTTATGTTACAAAA+AGG | - | tig0021477:17621-17640 | None:intergenic | 25.0% |
| ! | TGGTTCATATATTAAAACAG+AGG | - | tig0021477:17664-17683 | None:intergenic | 25.0% |
| ! | TCTTCTAATTTAGTACTTTC+AGG | - | tig0021477:17755-17774 | None:intergenic | 25.0% |
| ! | AGTAATAGTATGAAATCATC+TGG | + | tig0021477:17797-17816 | Msa1392200:CDS | 25.0% |
| ! | ATAGTGGCAAAATCATATTA+CGG | - | tig0021477:18001-18020 | None:intergenic | 25.0% |
| !! | ATACTACTAAAAGCATATAG+TGG | - | tig0021477:18017-18036 | None:intergenic | 25.0% |
| !!! | TTGTTTCTCATTTTCTTACT+TGG | + | tig0021477:18042-18061 | Msa1392200:three_prime_UTR | 25.0% |
| ! | TCAAAAGAGCTATAATAAAC+GGG | - | tig0021477:18195-18214 | None:intergenic | 25.0% |
| ! | AAAAAAAAAGTTGTGCCAAA+AGG | - | tig0021477:18375-18394 | None:intergenic | 25.0% |
| ! | GGGTGAATAAATTATAGATT+TGG | + | tig0021477:18475-18494 | Msa1392200:intron | 25.0% |
| ! | AATTACTGTTAAAATCTTGG+TGG | + | tig0021477:18538-18557 | Msa1392200:intron | 25.0% |
| ! | ACACAAAGTAAGGAAATTTA+AGG | - | tig0021477:18681-18700 | None:intergenic | 25.0% |
| ! | AGATAAAATAAGGAGAAATG+AGG | - | tig0021477:18899-18918 | None:intergenic | 25.0% |
| ! | AGTAGAAGAGAGATAAAATA+AGG | - | tig0021477:18909-18928 | None:intergenic | 25.0% |
| ! | ATAAGTTCATATCAAGACTA+TGG | + | tig0021477:18945-18964 | Msa1392200:intron | 25.0% |
| !!! | TTAGTTTTTACATAGGAACT+AGG | + | tig0021477:19159-19178 | Msa1392200:intron | 25.0% |
| ! | AAACATTCACTTAGCATTTA+GGG | - | tig0021477:19536-19555 | None:intergenic | 25.0% |
| ! | TAAACATTCACTTAGCATTT+AGG | - | tig0021477:19537-19556 | None:intergenic | 25.0% |
| ! | ATGTCACAAATTGATTGATA+AGG | + | tig0021477:19575-19594 | Msa1392200:intron | 25.0% |
| ! | TTTACGGGATAACATTTATA+AGG | + | tig0021477:19659-19678 | Msa1392200:intron | 25.0% |
| ! | TTACGGGATAACATTTATAA+GGG | + | tig0021477:19660-19679 | Msa1392200:intron | 25.0% |
| ! | AATTTAATTCAAGGTCTGTT+TGG | - | tig0021477:19842-19861 | None:intergenic | 25.0% |
| ! | GAATTAAATTCCTGTAATTG+GGG | + | tig0021477:19852-19871 | Msa1392200:intron | 25.0% |
| ! | TTCCATTCACTATGATTTTC+GGG | - | tig0021477:16986-17005 | None:intergenic | 30.0% |
| ! | CTTCCATTCACTATGATTTT+CGG | - | tig0021477:16987-17006 | None:intergenic | 30.0% |
| AACAATTTCAGATGATGCAA+TGG | + | tig0021477:17341-17360 | Msa1392200:intron | 30.0% | |
| AGGTTATCAAATCAACAATC+AGG | - | tig0021477:17368-17387 | None:intergenic | 30.0% | |
| AAGATATCCGAAAATCAAGA+TGG | + | tig0021477:17508-17527 | Msa1392200:CDS | 30.0% | |
| TTCATACTATTACTATCCTG+TGG | - | tig0021477:17791-17810 | None:intergenic | 30.0% | |
| TTGCATTATGTTCAGAAGAT+AGG | - | tig0021477:17895-17914 | None:intergenic | 30.0% | |
| TTCTAATATCTTTGCTCTCA+TGG | + | tig0021477:18445-18464 | Msa1392200:intron | 30.0% | |
| !! | AAAATCTTGGTGGTTTTCAT+AGG | + | tig0021477:18548-18567 | Msa1392200:intron | 30.0% |
| AAAACTGCATACACAAAGTA+AGG | - | tig0021477:18691-18710 | None:intergenic | 30.0% | |
| ! | TTTTAACCAACTTCATCAAG+AGG | + | tig0021477:18823-18842 | Msa1392200:three_prime_UTR | 30.0% |
| ! | ATTGCTACTTCTTCATTCTT+TGG | - | tig0021477:18858-18877 | None:intergenic | 30.0% |
| !! | TCTCTCTTCTACTCTTATTT+TGG | + | tig0021477:18916-18935 | Msa1392200:intron | 30.0% |
| ! | TCAGTCCCTTTTCTTTAATA+TGG | + | tig0021477:19108-19127 | Msa1392200:intron | 30.0% |
| GGTCTCCATATTAAAGAAAA+GGG | - | tig0021477:19116-19135 | None:intergenic | 30.0% | |
| AGGTCTCCATATTAAAGAAA+AGG | - | tig0021477:19117-19136 | None:intergenic | 30.0% | |
| AAACACCTTATGTTATACGA+TGG | - | tig0021477:19189-19208 | None:intergenic | 30.0% | |
| TTTATACAACACTTTGGTTG+AGG | - | tig0021477:19253-19272 | None:intergenic | 30.0% | |
| TGTCAAATAATAAACCACAG+TGG | + | tig0021477:19335-19354 | Msa1392200:intron | 30.0% | |
| AAATAATAAACCACAGTGGA+TGG | + | tig0021477:19339-19358 | Msa1392200:intron | 30.0% | |
| AAACGATGAGTAATGTTATG+AGG | + | tig0021477:19363-19382 | Msa1392200:intron | 30.0% | |
| AACGATGAGTAATGTTATGA+GGG | + | tig0021477:19364-19383 | Msa1392200:intron | 30.0% | |
| !!! | ATTTTTTTAACTCCTTCCTC+TGG | + | tig0021477:19449-19468 | Msa1392200:intron | 30.0% |
| !!! | TTTTTTTAACTCCTTCCTCT+GGG | + | tig0021477:19450-19469 | Msa1392200:intron | 30.0% |
| AACATTCACTTAGCATTTAG+GGG | - | tig0021477:19535-19554 | None:intergenic | 30.0% | |
| ! | GTTTACCCTTGTTTGATATT+TGG | + | tig0021477:19552-19571 | Msa1392200:intron | 30.0% |
| GACATCCAAATATCAAACAA+GGG | - | tig0021477:19560-19579 | None:intergenic | 30.0% | |
| TGACATCCAAATATCAAACA+AGG | - | tig0021477:19561-19580 | None:intergenic | 30.0% | |
| TTGTAAAATGAGAAGCGAAT+GGG | - | tig0021477:19715-19734 | None:intergenic | 30.0% | |
| TAGAAAAGCCATATTGTGAT+CGG | - | tig0021477:19743-19762 | None:intergenic | 30.0% | |
| AGACCAAATGAAAAGTTTCT+CGG | + | tig0021477:20141-20160 | Msa1392200:three_prime_UTR | 30.0% | |
| !! | AATCTCAAGTTGAATCAAGT+TGG | + | tig0021477:20240-20259 | Msa1392200:three_prime_UTR | 30.0% |
| ! | GTAAAAGTGTGGAAATCTAG+CGG | + | tig0021477:16941-16960 | Msa1392200:five_prime_UTR | 35.0% |
| ATCCCGAAAATCATAGTGAA+TGG | + | tig0021477:16981-17000 | Msa1392200:exon | 35.0% | |
| ! | AGAAGAGAGGTTTGTTTGAA+GGG | + | tig0021477:17012-17031 | Msa1392200:CDS | 35.0% |
| ! | CAAAGTCGCTTTGCAATTTA+TGG | + | tig0021477:17065-17084 | Msa1392200:CDS | 35.0% |
| ATTTCATTGCCAACATTCAG+AGG | + | tig0021477:17194-17213 | Msa1392200:intron | 35.0% | |
| GAAATTTCTCCTCTGAATGT+TGG | - | tig0021477:17206-17225 | None:intergenic | 35.0% | |
| !! | GCTGTTTTCATAAGCTATTC+TGG | + | tig0021477:17262-17281 | Msa1392200:intron | 35.0% |
| TAAGATATTCATCACAGGGA+TGG | + | tig0021477:17392-17411 | Msa1392200:intron | 35.0% | |
| AGCTAGTGCTAGATATTCTA+TGG | + | tig0021477:17423-17442 | Msa1392200:CDS | 35.0% | |
| GCTAGTGCTAGATATTCTAT+GGG | + | tig0021477:17424-17443 | Msa1392200:CDS | 35.0% | |
| GCGCGTTAATAGTTCTTTAT+TGG | + | tig0021477:17453-17472 | Msa1392200:CDS | 35.0% | |
| GAATCCTACTAGTATCATCT+TGG | + | tig0021477:17568-17587 | Msa1392200:intron | 35.0% | |
| GTCAATGGGGAAAACATATT+TGG | - | tig0021477:17844-17863 | None:intergenic | 35.0% | |
| ACCATAACAGAGAACTTAAC+AGG | + | tig0021477:18085-18104 | Msa1392200:three_prime_UTR | 35.0% | |
| TCCTGTTAAGTTCTCTGTTA+TGG | - | tig0021477:18089-18108 | None:intergenic | 35.0% | |
| GGAAGCTTCAAATGAGAAAT+TGG | + | tig0021477:18273-18292 | Msa1392200:intron | 35.0% | |
| AGCTTCTCATAAAGTAGAGT+TGG | + | tig0021477:18415-18434 | Msa1392200:intron | 35.0% | |
| CTCATAAAGTAGAGTTGGAT+TGG | + | tig0021477:18420-18439 | Msa1392200:intron | 35.0% | |
| TAGTTCAGATGCTCATGTTA+AGG | - | tig0021477:18511-18530 | None:intergenic | 35.0% | |
| ! | GTGGTTTTCATAGGTTCAAA+AGG | + | tig0021477:18557-18576 | Msa1392200:intron | 35.0% |
| CAAAACTCCAAAAACTGACA+AGG | - | tig0021477:18595-18614 | None:intergenic | 35.0% | |
| ACCTTTCTCAAATGACAGTT+GGG | - | tig0021477:18640-18659 | None:intergenic | 35.0% | |
| ATGAGGTTATCTATACCTGA+AGG | - | tig0021477:18882-18901 | None:intergenic | 35.0% | |
| ATGAGTAATGTTATGAGGGA+CGG | + | tig0021477:19368-19387 | Msa1392200:intron | 35.0% | |
| TGAGCTAAGAGAAAAGGAAT+TGG | - | tig0021477:19492-19511 | None:intergenic | 35.0% | |
| ! | CTGATTTGAGCTAAGAGAAA+AGG | - | tig0021477:19498-19517 | None:intergenic | 35.0% |
| ACATTCACTTAGCATTTAGG+GGG | - | tig0021477:19534-19553 | None:intergenic | 35.0% | |
| TGTAAAATGAGAAGCGAATG+GGG | - | tig0021477:19714-19733 | None:intergenic | 35.0% | |
| CTTGTAAAATGAGAAGCGAA+TGG | - | tig0021477:19716-19735 | None:intergenic | 35.0% | |
| AGAAAAGCCATATTGTGATC+GGG | - | tig0021477:19742-19761 | None:intergenic | 35.0% | |
| !! | CAAGAGTATCGATCACAATA+TGG | + | tig0021477:19780-19799 | Msa1392200:intron | 35.0% |
| ! | CAAGGAAAGATCAAAGGTTT+TGG | - | tig0021477:19878-19897 | None:intergenic | 35.0% |
| !!! | GAGTATTTGTTTTATCACGC+TGG | + | tig0021477:20013-20032 | Msa1392200:intron | 35.0% |
| ! | ACACCGAGAAACTTTTCATT+TGG | - | tig0021477:20147-20166 | None:intergenic | 35.0% |
| AATGGAAGAAGAGAGAAGAG+AGG | + | tig0021477:16999-17018 | Msa1392200:exon | 40.0% | |
| ! | GAGAAGAGAGGTTTGTTTGA+AGG | + | tig0021477:17011-17030 | Msa1392200:CDS | 40.0% |
| AAGCTATTCTGGTGAGCTTA+TGG | + | tig0021477:17273-17292 | Msa1392200:intron | 40.0% | |
| GCTGAAAACAACTTATGGTG+AGG | + | tig0021477:17302-17321 | Msa1392200:intron | 40.0% | |
| TAGCAGCTGAATGGAATTTG+AGG | - | tig0021477:17480-17499 | None:intergenic | 40.0% | |
| TCAATGTTGTAGCAGCTGAA+TGG | - | tig0021477:17489-17508 | None:intergenic | 40.0% | |
| CATGCCAAGATGATACTAGT+AGG | - | tig0021477:17575-17594 | None:intergenic | 40.0% | |
| ACCATTGCACTCGATTCAAT+AGG | + | tig0021477:17680-17699 | Msa1392200:intron | 40.0% | |
| ACCTATTGAATCGAGTGCAA+TGG | - | tig0021477:17684-17703 | None:intergenic | 40.0% | |
| ACACTTCACGTTGCAGAAAT+GGG | + | tig0021477:17712-17731 | Msa1392200:CDS | 40.0% | |
| !!! | CTTGGTTTTGCAAACTACTG+AGG | + | tig0021477:18060-18079 | Msa1392200:three_prime_UTR | 40.0% |
| TTTGCTCTCATGGATTCACA+GGG | + | tig0021477:18455-18474 | Msa1392200:intron | 40.0% | |
| ! | CACAAGTCCTTGTCAGTTTT+TGG | + | tig0021477:18585-18604 | Msa1392200:three_prime_UTR | 40.0% |
| ! | ACCCAACTGTCATTTGAGAA+AGG | + | tig0021477:18636-18655 | Msa1392200:three_prime_UTR | 40.0% |
| CACCTTTCTCAAATGACAGT+TGG | - | tig0021477:18641-18660 | None:intergenic | 40.0% | |
| ! | CAACTGTCATTTGAGAAAGG+TGG | + | tig0021477:18639-18658 | Msa1392200:intron | 40.0% |
| TAACCAACTTCATCAAGAGG+TGG | + | tig0021477:18826-18845 | Msa1392200:three_prime_UTR | 40.0% | |
| GAAGAAGTAGCAATTCCTTC+AGG | + | tig0021477:18864-18883 | Msa1392200:three_prime_UTR | 40.0% | |
| GCATGCCATCGTATAACATA+AGG | + | tig0021477:19181-19200 | Msa1392200:intron | 40.0% | |
| TCCAGTTTCAAACACCATGA+GGG | + | tig0021477:19306-19325 | Msa1392200:intron | 40.0% | |
| GCTAAGAGAAAAGGAATTGG+AGG | - | tig0021477:19489-19508 | None:intergenic | 40.0% | |
| GTAAAATGAGAAGCGAATGG+GGG | - | tig0021477:19713-19732 | None:intergenic | 40.0% | |
| ATTCAAGGTCTGTTTGGACT+GGG | - | tig0021477:19836-19855 | None:intergenic | 40.0% | |
| AATTCAAGGTCTGTTTGGAC+TGG | - | tig0021477:19837-19856 | None:intergenic | 40.0% | |
| TAGGAGCAAGGAAAGATCAA+AGG | - | tig0021477:19884-19903 | None:intergenic | 40.0% | |
| CACCAAAATCTTGCAATGCT+CGG | - | tig0021477:20103-20122 | None:intergenic | 40.0% | |
| AAGTGTGGAGGAGAGAGAAT+CGG | - | tig0021477:17118-17137 | None:intergenic | 45.0% | |
| TGTATGTACCTGTCGAAGTG+TGG | - | tig0021477:17133-17152 | None:intergenic | 45.0% | |
| ATATTCATCACAGGGATGGC+TGG | + | tig0021477:17396-17415 | Msa1392200:intron | 45.0% | |
| CATTTCTGCAACGTGAAGTG+TGG | - | tig0021477:17713-17732 | None:intergenic | 45.0% | |
| CACACTTCACGTTGCAGAAA+TGG | + | tig0021477:17711-17730 | Msa1392200:CDS | 45.0% | |
| !! | ACTTTCAGGTTCGTGTTCAG+AGG | - | tig0021477:17741-17760 | None:intergenic | 45.0% |
| !! | ATGTTTTCCCCATTGACTGC+TGG | + | tig0021477:17847-17866 | Msa1392200:exon | 45.0% |
| TATCGATGCCAGCAGTCAAT+GGG | - | tig0021477:17858-17877 | None:intergenic | 45.0% | |
| !! | TGCTGGCATCGATAGTGTAA+AGG | + | tig0021477:17864-17883 | Msa1392200:three_prime_UTR | 45.0% |
| !! | GCTGGCATCGATAGTGTAAA+GGG | + | tig0021477:17865-17884 | Msa1392200:three_prime_UTR | 45.0% |
| !! | CTGGCATCGATAGTGTAAAG+GGG | + | tig0021477:17866-17885 | Msa1392200:three_prime_UTR | 45.0% |
| !! | TGGCATCGATAGTGTAAAGG+GGG | + | tig0021477:17867-17886 | Msa1392200:three_prime_UTR | 45.0% |
| CTTTGCTCTCATGGATTCAC+AGG | + | tig0021477:18454-18473 | Msa1392200:intron | 45.0% | |
| CTTCCACCTCTTGATGAAGT+TGG | - | tig0021477:18832-18851 | None:intergenic | 45.0% | |
| GACAAGTATCTCACACACTC+TGG | - | tig0021477:19055-19074 | None:intergenic | 45.0% | |
| CTCCAGTTTCAAACACCATG+AGG | + | tig0021477:19305-19324 | Msa1392200:intron | 45.0% | |
| ! | ACCCTCATGGTGTTTGAAAC+TGG | - | tig0021477:19310-19329 | None:intergenic | 45.0% |
| ! | TTCAAACACCATGAGGGTGT+TGG | + | tig0021477:19312-19331 | Msa1392200:intron | 45.0% |
| ATTTGACACCAACACCCTCA+TGG | - | tig0021477:19323-19342 | None:intergenic | 45.0% | |
| GAAAAGGAATTGGAGGTCCT+GGG | - | tig0021477:19482-19501 | None:intergenic | 45.0% | |
| AGAAAAGGAATTGGAGGTCC+TGG | - | tig0021477:19483-19502 | None:intergenic | 45.0% | |
| CACTTAGCATTTAGGGGGTT+GGG | - | tig0021477:19529-19548 | None:intergenic | 45.0% | |
| TCACTTAGCATTTAGGGGGT+TGG | - | tig0021477:19530-19549 | None:intergenic | 45.0% | |
| CAAGAGTCCCGATCACAATA+TGG | + | tig0021477:19732-19751 | Msa1392200:intron | 45.0% | |
| TTCAAGGTCTGTTTGGACTG+GGG | - | tig0021477:19835-19854 | None:intergenic | 45.0% | |
| !! | AAGGTTTTGGCCCCAATTAC+AGG | - | tig0021477:19865-19884 | None:intergenic | 45.0% |
| ! | TTTTATTCAGGCTGCCAGAG+CGG | + | tig0021477:20052-20071 | Msa1392200:intron | 45.0% |
| !! | GACCGAGCATTGCAAGATTT+TGG | + | tig0021477:20098-20117 | Msa1392200:three_prime_UTR | 45.0% |
| GGAGGAGAGAGAATCGGAAA+GGG | - | tig0021477:17112-17131 | None:intergenic | 50.0% | |
| TGGAGGAGAGAGAATCGGAA+AGG | - | tig0021477:17113-17132 | None:intergenic | 50.0% | |
| ATGTACCTGTCGAAGTGTGG+AGG | - | tig0021477:17130-17149 | None:intergenic | 50.0% | |
| AGACAAGAATGAGCAGCCAC+AGG | + | tig0021477:17772-17791 | Msa1392200:CDS | 50.0% | |
| ATCGATGCCAGCAGTCAATG+GGG | - | tig0021477:17857-17876 | None:intergenic | 50.0% | |
| CTATCGATGCCAGCAGTCAA+TGG | - | tig0021477:17859-17878 | None:intergenic | 50.0% | |
| GTGAGATACTTGTCTCGCTG+TGG | + | tig0021477:19061-19080 | Msa1392200:intron | 50.0% | |
| TCATCGTTTGCCATCCACTG+TGG | - | tig0021477:19352-19371 | None:intergenic | 50.0% | |
| ! | TCTGTTTGGACTGGGGGTTT+AGG | - | tig0021477:19828-19847 | None:intergenic | 50.0% |
| ! | TCAAGGTCTGTTTGGACTGG+GGG | - | tig0021477:19834-19853 | None:intergenic | 50.0% |
| TCCTTGCTCCTAAAGCTGAG+AGG | + | tig0021477:19892-19911 | Msa1392200:intron | 50.0% | |
| !! | TCCTCTCAGCTTTAGGAGCA+AGG | - | tig0021477:19896-19915 | None:intergenic | 50.0% |
| CTGTCTCTCCTCTCAGCTTT+AGG | - | tig0021477:19903-19922 | None:intergenic | 50.0% | |
| TCTCTCCTCCACACTTCGAC+AGG | + | tig0021477:17122-17141 | Msa1392200:CDS | 55.0% | |
| TTGGGTCGCACGAAGCTTTG+GGG | - | tig0021477:18622-18641 | None:intergenic | 55.0% | |
| GTTGGGTCGCACGAAGCTTT+GGG | - | tig0021477:18623-18642 | None:intergenic | 55.0% | |
| AGTTGGGTCGCACGAAGCTT+TGG | - | tig0021477:18624-18643 | None:intergenic | 55.0% | |
| CTGGGTTCAAACCCAGAGGA+AGG | - | tig0021477:19464-19483 | None:intergenic | 55.0% | |
| CTTCCTCTGGGTTTGAACCC+AGG | + | tig0021477:19462-19481 | Msa1392200:intron | 55.0% | |
| TGCCAGAGCGGCATCACAAA+TGG | + | tig0021477:20064-20083 | Msa1392200:three_prime_UTR | 55.0% | |
| CTCCATTTGTGATGCCGCTC+TGG | - | tig0021477:20069-20088 | None:intergenic | 55.0% | |
| GGTCCTGGGTTCAAACCCAG+AGG | - | tig0021477:19468-19487 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0021477 | gene | 16941 | 20322 | 16941 | ID=Msa1392200;Name=Msa1392200 |
| tig0021477 | mRNA | 16941 | 20322 | 16941 | ID=Msa1392200-mRNA-1;Parent=Msa1392200;Name=Msa1392200-mRNA-1;_AED=0.05;_eAED=0.05;_QI=59|1|1|1|0.4|0.5|6|728|141 |
| tig0021477 | exon | 16941 | 17143 | 16941 | ID=Msa1392200-mRNA-1:exon:13031;Parent=Msa1392200-mRNA-1 |
| tig0021477 | exon | 17409 | 17529 | 17409 | ID=Msa1392200-mRNA-1:exon:13032;Parent=Msa1392200-mRNA-1 |
| tig0021477 | exon | 17702 | 18126 | 17702 | ID=Msa1392200-mRNA-1:exon:13033;Parent=Msa1392200-mRNA-1 |
| tig0021477 | exon | 18570 | 18657 | 18570 | ID=Msa1392200-mRNA-1:exon:13034;Parent=Msa1392200-mRNA-1 |
| tig0021477 | exon | 18771 | 18885 | 18771 | ID=Msa1392200-mRNA-1:exon:13035;Parent=Msa1392200-mRNA-1 |
| tig0021477 | exon | 20062 | 20322 | 20062 | ID=Msa1392200-mRNA-1:exon:13036;Parent=Msa1392200-mRNA-1 |
| tig0021477 | five_prime_UTR | 16941 | 16999 | 16941 | ID=Msa1392200-mRNA-1:five_prime_utr;Parent=Msa1392200-mRNA-1 |
| tig0021477 | CDS | 17000 | 17143 | 17000 | ID=Msa1392200-mRNA-1:cds;Parent=Msa1392200-mRNA-1 |
| tig0021477 | CDS | 17409 | 17529 | 17409 | ID=Msa1392200-mRNA-1:cds;Parent=Msa1392200-mRNA-1 |
| tig0021477 | CDS | 17702 | 17862 | 17702 | ID=Msa1392200-mRNA-1:cds;Parent=Msa1392200-mRNA-1 |
| tig0021477 | three_prime_UTR | 17863 | 18126 | 17863 | ID=Msa1392200-mRNA-1:three_prime_utr;Parent=Msa1392200-mRNA-1 |
| tig0021477 | three_prime_UTR | 18570 | 18657 | 18570 | ID=Msa1392200-mRNA-1:three_prime_utr;Parent=Msa1392200-mRNA-1 |
| tig0021477 | three_prime_UTR | 18771 | 18885 | 18771 | ID=Msa1392200-mRNA-1:three_prime_utr;Parent=Msa1392200-mRNA-1 |
| tig0021477 | three_prime_UTR | 20062 | 20322 | 20062 | ID=Msa1392200-mRNA-1:three_prime_utr;Parent=Msa1392200-mRNA-1 |
| Gene Sequence |
| Protein sequence |
