Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1320390 | XP_003623155.2 | 97.980 | 99 | 2 | 0 | 1 | 99 | 1 | 99 | 7.35e-62 | 193 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1320390 | sp|Q9SI54|LSM7_ARATH | 91.837 | 98 | 8 | 0 | 1 | 98 | 1 | 98 | 4.27e-60 | 181 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1320390 | G7L5K6 | 97.980 | 99 | 2 | 0 | 1 | 99 | 1 | 99 | 3.51e-62 | 193 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006380 | Msa1320390 | 0.817438 | 3.297335e-52 | -8.615850e-47 |
| Msa0027260 | Msa1320390 | 0.805219 | 1.483858e-49 | -8.615850e-47 |
| Msa0032260 | Msa1320390 | 0.812928 | 3.311551e-51 | -8.615850e-47 |
| Msa0048150 | Msa1320390 | 0.812100 | 5.023577e-51 | -8.615850e-47 |
| Msa0056470 | Msa1320390 | 0.834046 | 3.757657e-56 | -8.615850e-47 |
| Msa0064350 | Msa1320390 | 0.842146 | 3.090023e-58 | -8.615850e-47 |
| Msa0064380 | Msa1320390 | 0.811793 | 5.860842e-51 | -8.615850e-47 |
| Msa0661300 | Msa1320390 | 0.822919 | 1.830965e-53 | -8.615850e-47 |
| Msa0663900 | Msa1320390 | 0.811866 | 5.650169e-51 | -8.615850e-47 |
| Msa0666270 | Msa1320390 | 0.830883 | 2.285456e-55 | -8.615850e-47 |
| Msa0687630 | Msa1320390 | 0.816234 | 6.143032e-52 | -8.615850e-47 |
| Msa0692940 | Msa1320390 | 0.802861 | 4.588889e-49 | -8.615850e-47 |
| Msa0774540 | Msa1320390 | 0.801255 | 9.813461e-49 | -8.615850e-47 |
| Msa0806920 | Msa1320390 | 0.815166 | 1.062621e-51 | -8.615850e-47 |
| Msa0831870 | Msa1320390 | 0.802338 | 5.881740e-49 | -8.615850e-47 |
| Msa0127310 | Msa1320390 | 0.806251 | 9.007770e-50 | -8.615850e-47 |
| Msa0140110 | Msa1320390 | 0.810056 | 1.393229e-50 | -8.615850e-47 |
| Msa0140650 | Msa1320390 | 0.824036 | 1.003065e-53 | -8.615850e-47 |
| Msa0183460 | Msa1320390 | 0.805656 | 1.201624e-49 | -8.615850e-47 |
| Msa0191050 | Msa1320390 | 0.823733 | 1.181734e-53 | -8.615850e-47 |
| Msa0194480 | Msa1320390 | 0.822827 | 1.923143e-53 | -8.615850e-47 |
| Msa0199690 | Msa1320390 | 0.808572 | 2.899326e-50 | -8.615850e-47 |
| Msa0231880 | Msa1320390 | 0.828928 | 6.843993e-55 | -8.615850e-47 |
| Msa0233350 | Msa1320390 | 0.812535 | 4.037794e-51 | -8.615850e-47 |
| Msa1239910 | Msa1320390 | 0.906289 | 1.739808e-80 | -8.615850e-47 |
| Msa1257510 | Msa1320390 | 0.802591 | 5.216591e-49 | -8.615850e-47 |
| Msa1269300 | Msa1320390 | 0.800401 | 1.466254e-48 | -8.615850e-47 |
| Msa1275540 | Msa1320390 | 0.802797 | 4.731213e-49 | -8.615850e-47 |
| Msa1296830 | Msa1320390 | 0.802132 | 6.486592e-49 | -8.615850e-47 |
| Msa1304820 | Msa1320390 | 0.817423 | 3.323639e-52 | -8.615850e-47 |
| Msa1320390 | Msa1364910 | 0.833407 | 5.430044e-56 | -8.615850e-47 |
| Msa1320390 | Msa1365700 | -0.825607 | 4.275211e-54 | -8.615850e-47 |
| Msa1320390 | Msa1385770 | 0.801175 | 1.019443e-48 | -8.615850e-47 |
| Msa1320390 | Msa1393740 | 0.808940 | 2.418819e-50 | -8.615850e-47 |
| Msa1320390 | Msa1404190 | 0.821888 | 3.178154e-53 | -8.615850e-47 |
| Msa1320390 | Msa1409240 | 0.800146 | 1.652888e-48 | -8.615850e-47 |
| Msa1320390 | Msa1420990 | 0.805927 | 1.054100e-49 | -8.615850e-47 |
| Msa1320390 | Msa1450280 | 0.814012 | 1.913031e-51 | -8.615850e-47 |
| Msa1320390 | Msa1456050 | 0.828461 | 8.877321e-55 | -8.615850e-47 |
| Msa1320390 | Msa1465080 | 0.803139 | 4.019478e-49 | -8.615850e-47 |
| Msa0366890 | Msa1320390 | 0.808092 | 3.671167e-50 | -8.615850e-47 |
| Msa0378490 | Msa1320390 | 0.824719 | 6.930366e-54 | -8.615850e-47 |
| Msa0385580 | Msa1320390 | 0.803075 | 4.144325e-49 | -8.615850e-47 |
| Msa0414800 | Msa1320390 | 0.809267 | 2.059356e-50 | -8.615850e-47 |
| Msa0415430 | Msa1320390 | 0.814957 | 1.182461e-51 | -8.615850e-47 |
| Msa0427150 | Msa1320390 | 0.810758 | 9.830886e-51 | -8.615850e-47 |
| Msa0471590 | Msa1320390 | 0.813466 | 2.524050e-51 | -8.615850e-47 |
| Msa0481480 | Msa1320390 | 0.833165 | 6.238153e-56 | -8.615850e-47 |
| Msa1013040 | Msa1320390 | 0.801205 | 1.004900e-48 | -8.615850e-47 |
| Msa1046020 | Msa1320390 | 0.808945 | 2.412822e-50 | -8.615850e-47 |
| Msa1046060 | Msa1320390 | 0.800836 | 1.195646e-48 | -8.615850e-47 |
| Msa0262310 | Msa1320390 | 0.824832 | 6.517433e-54 | -8.615850e-47 |
| Msa0267970 | Msa1320390 | 0.815981 | 6.997364e-52 | -8.615850e-47 |
| Msa0280430 | Msa1320390 | 0.804149 | 2.480792e-49 | -8.615850e-47 |
| Msa0304590 | Msa1320390 | 0.844986 | 5.380918e-59 | -8.615850e-47 |
| Msa0304660 | Msa1320390 | 0.828957 | 6.734333e-55 | -8.615850e-47 |
| Msa0329350 | Msa1320390 | 0.805700 | 1.176253e-49 | -8.615850e-47 |
| Msa0331700 | Msa1320390 | 0.827951 | 1.178197e-54 | -8.615850e-47 |
| Msa0337650 | Msa1320390 | 0.824467 | 7.943976e-54 | -8.615850e-47 |
| Msa1126510 | Msa1320390 | 0.813155 | 2.954033e-51 | -8.615850e-47 |
| Msa1126770 | Msa1320390 | 0.824741 | 6.848011e-54 | -8.615850e-47 |
| Msa1134090 | Msa1320390 | 0.804089 | 2.553690e-49 | -8.615850e-47 |
| Msa1166860 | Msa1320390 | 0.813743 | 2.193425e-51 | -8.615850e-47 |
| Msa1181850 | Msa1320390 | 0.809293 | 2.032638e-50 | -8.615850e-47 |
| Msa1181860 | Msa1320390 | 0.802593 | 5.212856e-49 | -8.615850e-47 |
| Msa1184370 | Msa1320390 | 0.810595 | 1.066107e-50 | -8.615850e-47 |
| Msa0485850 | Msa1320390 | 0.820294 | 7.399413e-53 | -8.615850e-47 |
| Msa0508590 | Msa1320390 | 0.807138 | 5.851187e-50 | -8.615850e-47 |
| Msa0508630 | Msa1320390 | 0.815060 | 1.121682e-51 | -8.615850e-47 |
| Msa0521050 | Msa1320390 | 0.855498 | 6.058249e-62 | -8.615850e-47 |
| Msa0552810 | Msa1320390 | 0.822191 | 2.703476e-53 | -8.615850e-47 |
| Msa0581070 | Msa1320390 | 0.807817 | 4.200475e-50 | -8.615850e-47 |
| Msa0974810 | Msa1320390 | 0.802368 | 5.800312e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1320390 | MtrunA17_Chr7g0240391 | 97.980 | 99 | 2 | 0 | 1 | 99 | 1 | 99 | 6.76e-66 | 193 |
| Msa1320390 | MtrunA17_Chr8g0351841 | 97.980 | 99 | 2 | 0 | 1 | 99 | 1 | 99 | 2.29e-65 | 192 |
| Msa1320390 | MtrunA17_Chr7g0266561 | 38.028 | 71 | 35 | 1 | 10 | 80 | 9 | 70 | 8.36e-13 | 58.5 |
| Msa1320390 | MtrunA17_Chr6g0477821 | 38.028 | 71 | 35 | 1 | 10 | 80 | 9 | 70 | 1.14e-12 | 58.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1320390 | AT2G03870.2 | 91.837 | 98 | 8 | 0 | 1 | 98 | 1 | 98 | 4.34e-61 | 181 |
| Msa1320390 | AT2G03870.1 | 91.837 | 98 | 8 | 0 | 1 | 98 | 1 | 98 | 4.34e-61 | 181 |
| Msa1320390 | AT2G23930.1 | 42.254 | 71 | 32 | 2 | 10 | 80 | 9 | 70 | 3.85e-13 | 59.7 |
| Msa1320390 | AT3G11500.2 | 39.437 | 71 | 34 | 1 | 10 | 80 | 9 | 70 | 2.31e-12 | 57.8 |
| Msa1320390 | AT3G11500.1 | 39.437 | 71 | 34 | 1 | 10 | 80 | 9 | 70 | 2.31e-12 | 57.8 |
Find 42 sgRNAs with CRISPR-Local
Find 229 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACGGTTCACTGTTTGAAAA+TGG | 0.268324 | 8_4:+24844058 | None:intergenic |
| GTAGTGACAGGTACTCTAAA+AGG | 0.295589 | 8_4:-24841467 | Msa1320390:intron |
| TTAGCAAAATTTGTTGATAA+AGG | 0.301879 | 8_4:-24843850 | Msa1320390:CDS |
| TTGTCGCAATGCAGGTTTGC+AGG | 0.321708 | 8_4:-24839635 | Msa1320390:intron |
| TACAATTAAGCCAAGACTTC+TGG | 0.324979 | 8_4:+24840308 | None:intergenic |
| GGTGTTCAAGTCAAGCTTAC+TGG | 0.353916 | 8_4:-24843829 | Msa1320390:CDS |
| ATACCTTCTATGTTGCTAAC+CGG | 0.362506 | 8_4:-24839512 | Msa1320390:three_prime_UTR |
| TCTTGAGGCAGATGGGGCCT+AGG | 0.394260 | 8_4:-24839553 | Msa1320390:exon |
| CCAGGACAAGGTTAAGTAAC+TGG | 0.396790 | 8_4:+24841438 | None:intergenic |
| TGGGAGGAAAGAAACTGTTC+TGG | 0.428213 | 8_4:-24843875 | Msa1320390:CDS |
| GCCCCATCTGCCTCAAGAAA+GGG | 0.437926 | 8_4:+24839558 | None:intergenic |
| ACTTGTCCAGATTCTTAAGA+AGG | 0.477205 | 8_4:+24839285 | None:intergenic |
| GGCCCCATCTGCCTCAAGAA+AGG | 0.483618 | 8_4:+24839557 | None:intergenic |
| AACCCCTTTCTTGAGGCAGA+TGG | 0.486249 | 8_4:-24839561 | Msa1320390:CDS |
| ACCCCTTTCTTGAGGCAGAT+GGG | 0.488188 | 8_4:-24839560 | Msa1320390:CDS |
| CCCCTTTCTTGAGGCAGATG+GGG | 0.488254 | 8_4:-24839559 | Msa1320390:CDS |
| CCAGTTACTTAACCTTGTCC+TGG | 0.506664 | 8_4:-24841438 | Msa1320390:CDS |
| GACCCGGTTAGCAACATAGA+AGG | 0.513840 | 8_4:+24839509 | None:intergenic |
| AAAGTAAAGTGTTAATACAT+AGG | 0.514292 | 8_4:+24839434 | None:intergenic |
| TGTCGCAATGCAGGTTTGCA+GGG | 0.521696 | 8_4:-24839634 | Msa1320390:intron |
| TACCTTCTATGTTGCTAACC+GGG | 0.523052 | 8_4:-24839511 | Msa1320390:three_prime_UTR |
| TAGTGACAGGTACTCTAAAA+GGG | 0.532671 | 8_4:-24841466 | Msa1320390:CDS |
| ACAGATCAGACCAGAAGTCT+TGG | 0.544721 | 8_4:-24840318 | Msa1320390:CDS |
| AAGCTTACTGGTGGCAGACA+AGG | 0.544738 | 8_4:-24843817 | Msa1320390:intron |
| AACCATCATTGTGATCTACT+TGG | 0.547967 | 8_4:-24839469 | Msa1320390:three_prime_UTR |
| AAAACTCAACAGCTTCATCC+AGG | 0.561824 | 8_4:+24841420 | None:intergenic |
| TATAATGCGAGTTCAGATGC+TGG | 0.562375 | 8_4:-24839363 | Msa1320390:three_prime_UTR |
| TACCAAGTAGATCACAATGA+TGG | 0.584310 | 8_4:+24839467 | None:intergenic |
| ATGCTTGTGTCGCCAACTGA+TGG | 0.586363 | 8_4:-24839600 | Msa1320390:CDS |
| GTCGCAATGCAGGTTTGCAG+GGG | 0.591955 | 8_4:-24839633 | Msa1320390:intron |
| TTATACACACATTTACACCT+AGG | 0.592919 | 8_4:+24839536 | None:intergenic |
| GATTGCAAACCCCTTTCTTG+AGG | 0.598586 | 8_4:-24839568 | Msa1320390:CDS |
| TGTGTCGCCAACTGATGGTA+CGG | 0.598668 | 8_4:-24839595 | Msa1320390:CDS |
| AATACTACTGTCTACTTACA+CGG | 0.600314 | 8_4:+24844124 | None:intergenic |
| ATCTCGTCCGTACCATCAGT+TGG | 0.614027 | 8_4:+24839588 | None:intergenic |
| GACTTGCAAAACTTCAAACA+TGG | 0.629035 | 8_4:-24844030 | Msa1320390:intron |
| CCCCATCTGCCTCAAGAAAG+GGG | 0.629232 | 8_4:+24839559 | None:intergenic |
| AAGTAGATCACAATGATGGT+TGG | 0.646184 | 8_4:+24839471 | None:intergenic |
| CAACAGCTTCATCCAGGACA+AGG | 0.654174 | 8_4:+24841426 | None:intergenic |
| GTTCAAGTCAAGCTTACTGG+TGG | 0.669583 | 8_4:-24843826 | Msa1320390:CDS |
| GTAACTAAAATGACGAGACC+CGG | 0.671166 | 8_4:+24839493 | None:intergenic |
| ATAATGCGAGTTCAGATGCT+GGG | 0.671997 | 8_4:-24839362 | Msa1320390:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAATAAAGAAAAGAAATT+AGG | + | chr8_4:24839501-24839520 | None:intergenic | 10.0% |
| !! | AAATAAAATAAAAAAGAGAA+AGG | + | chr8_4:24839630-24839649 | None:intergenic | 10.0% |
| !!! | TTTAAAAAAAATAGATTTTG+AGG | - | chr8_4:24839946-24839965 | Msa1320390:intron | 10.0% |
| !!! | ATTTAGAAAAAAATAGATTT+TGG | - | chr8_4:24840091-24840110 | Msa1320390:intron | 10.0% |
| !!! | TTGTTAAAAAAATCATTTTT+AGG | + | chr8_4:24840149-24840168 | None:intergenic | 10.0% |
| !!! | AAATGATTTTTTTAACAAAA+TGG | - | chr8_4:24840151-24840170 | Msa1320390:intron | 10.0% |
| !! | TTGATTTAACAATAAATTTA+AGG | - | chr8_4:24840595-24840614 | Msa1320390:intron | 10.0% |
| !!! | AAATTTTTTTATTCAAAAGA+TGG | + | chr8_4:24840947-24840966 | None:intergenic | 10.0% |
| !!! | TTTATTTTATTTTTCAGTCT+GGG | - | chr8_4:24839512-24839531 | Msa1320390:three_prime_UTR | 15.0% |
| !!! | ATCTTCAAAAAATGATTTTT+AGG | + | chr8_4:24840043-24840062 | None:intergenic | 15.0% |
| !!! | TCTATTTTTTTCTAAATACA+AGG | + | chr8_4:24840088-24840107 | None:intergenic | 15.0% |
| !! | TTTAAGAAAATGAAAATGTT+TGG | + | chr8_4:24840822-24840841 | None:intergenic | 15.0% |
| !!! | TTGATTTGCTTTTAATATTA+TGG | - | chr8_4:24841089-24841108 | Msa1320390:intron | 15.0% |
| !!! | GTTTTTTTTGTTTTGTTTTA+AGG | - | chr8_4:24841329-24841348 | Msa1320390:intron | 15.0% |
| !! | AAAATAAACATTGAAGATTA+TGG | + | chr8_4:24841880-24841899 | None:intergenic | 15.0% |
| !! | ATGCAAAAAAAAAAAAAACA+TGG | + | chr8_4:24842043-24842062 | None:intergenic | 15.0% |
| !! | TATTTATTTCAATGTGTTAT+AGG | + | chr8_4:24842145-24842164 | None:intergenic | 15.0% |
| !!! | TTTGTTTTTGAAGAAAAAAA+GGG | - | chr8_4:24842233-24842252 | Msa1320390:intron | 15.0% |
| !!! | AAATGTTTTCTTATTTGTTT+TGG | - | chr8_4:24842577-24842596 | Msa1320390:intron | 15.0% |
| !!! | TTATGTTTTTAAAAAAGAGA+AGG | + | chr8_4:24843145-24843164 | None:intergenic | 15.0% |
| !!! | CAAAATTCATATATTTGTTT+TGG | + | chr8_4:24843696-24843715 | None:intergenic | 15.0% |
| !!! | CTTTATTTTATTTTTCAGTC+TGG | - | chr8_4:24839511-24839530 | Msa1320390:three_prime_UTR | 20.0% |
| !!! | TTAGCAAAATTTGTTGATAA+AGG | - | chr8_4:24839556-24839575 | Msa1320390:CDS | 20.0% |
| !!! | TCTTATCATTAAATTGATTC+TGG | - | chr8_4:24839661-24839680 | Msa1320390:intron | 20.0% |
| !! | TTGGATACATTCATATAAAT+AGG | - | chr8_4:24839701-24839720 | Msa1320390:intron | 20.0% |
| !! | TGGATACATTCATATAAATA+GGG | - | chr8_4:24839702-24839721 | Msa1320390:intron | 20.0% |
| !! | TGATTATGTAAAATTGATTG+TGG | - | chr8_4:24839791-24839810 | Msa1320390:intron | 20.0% |
| !! | TCAAAAAAATCCAAAACAAA+CGG | - | chr8_4:24840249-24840268 | Msa1320390:intron | 20.0% |
| !! | AATGTAAAATGATACATGTT+TGG | - | chr8_4:24840555-24840574 | Msa1320390:intron | 20.0% |
| !! | GAATTGAATTTATGATGTTT+GGG | + | chr8_4:24840709-24840728 | None:intergenic | 20.0% |
| !! | AGAATTGAATTTATGATGTT+TGG | + | chr8_4:24840710-24840729 | None:intergenic | 20.0% |
| !!! | ATAATTGATTTTGACATGTT+TGG | + | chr8_4:24840772-24840791 | None:intergenic | 20.0% |
| !!! | TTATGGATATTCTTATTTGT+AGG | - | chr8_4:24841106-24841125 | Msa1320390:intron | 20.0% |
| !! | AAACAAAAAAAACATACACA+AGG | + | chr8_4:24841322-24841341 | None:intergenic | 20.0% |
| !!! | AGCTTTTTATCTGAAATAAT+TGG | - | chr8_4:24841388-24841407 | Msa1320390:intron | 20.0% |
| !!! | GCTTTTTATCTGAAATAATT+GGG | - | chr8_4:24841389-24841408 | Msa1320390:intron | 20.0% |
| !! | CAATAAACATAAAGTAAGTT+TGG | + | chr8_4:24841783-24841802 | None:intergenic | 20.0% |
| !!! | AATGTTTATTTTAGAGATGA+GGG | - | chr8_4:24841888-24841907 | Msa1320390:intron | 20.0% |
| !!! | CTTTGTTTTTGAAGAAAAAA+AGG | - | chr8_4:24842232-24842251 | Msa1320390:intron | 20.0% |
| !! | AAACCTTGTTAAAATATAGA+AGG | - | chr8_4:24842294-24842313 | Msa1320390:intron | 20.0% |
| !!! | TTTCCTTCTATATTTTAACA+AGG | + | chr8_4:24842300-24842319 | None:intergenic | 20.0% |
| !! | AAACAAAAAAATGTCAACTT+AGG | + | chr8_4:24842398-24842417 | None:intergenic | 20.0% |
| !! | TTAAAGCTAAATATACACAA+GGG | + | chr8_4:24842684-24842703 | None:intergenic | 20.0% |
| !! | ATTAAAGCTAAATATACACA+AGG | + | chr8_4:24842685-24842704 | None:intergenic | 20.0% |
| !!! | AAAATAAAACACATGGATTT+TGG | + | chr8_4:24843035-24843054 | None:intergenic | 20.0% |
| !! | ATTCCTTATTGATAAAACAT+TGG | - | chr8_4:24843216-24843235 | Msa1320390:intron | 20.0% |
| !!! | TTTCCAATGTTTTATCAATA+AGG | + | chr8_4:24843222-24843241 | None:intergenic | 20.0% |
| !! | TATTGATAAAACATTGGAAA+TGG | - | chr8_4:24843222-24843241 | Msa1320390:intron | 20.0% |
| !!! | AACAAATATATGAATTTTGC+TGG | - | chr8_4:24843697-24843716 | Msa1320390:intron | 20.0% |
| !!! | ACAAATATATGAATTTTGCT+GGG | - | chr8_4:24843698-24843717 | Msa1320390:intron | 20.0% |
| !!! | AAAGTAAAGTGTTAATACAT+AGG | + | chr8_4:24843975-24843994 | None:intergenic | 20.0% |
| !!! | TGTATTAACACTTTACTTTT+TGG | - | chr8_4:24843976-24843995 | Msa1320390:intron | 20.0% |
| ! | AAGTAAGATAAATATGCGAA+AGG | + | chr8_4:24839428-24839447 | None:intergenic | 25.0% |
| ! | GGCTTAAAGTAATTTATGTT+TGG | - | chr8_4:24839682-24839701 | Msa1320390:intron | 25.0% |
| ! | TACATTCATATAAATAGGGT+TGG | - | chr8_4:24839706-24839725 | Msa1320390:intron | 25.0% |
| ! | ATTCACTCAAAATCAATTCT+CGG | + | chr8_4:24839771-24839790 | None:intergenic | 25.0% |
| ! | CTACAATTTCTAACTTTGTT+TGG | - | chr8_4:24839824-24839843 | Msa1320390:intron | 25.0% |
| !! | CTTTTATCGAGTAGAATTTA+GGG | - | chr8_4:24839908-24839927 | Msa1320390:intron | 25.0% |
| !! | CAAGTAAAATCAATTTTGGA+GGG | + | chr8_4:24840286-24840305 | None:intergenic | 25.0% |
| !! | TCAAGTAAAATCAATTTTGG+AGG | + | chr8_4:24840287-24840306 | None:intergenic | 25.0% |
| !! | GCTTCAAGTAAAATCAATTT+TGG | + | chr8_4:24840290-24840309 | None:intergenic | 25.0% |
| !! | ACTAAAAGTGATTTGTGTTT+GGG | + | chr8_4:24840392-24840411 | None:intergenic | 25.0% |
| !! | AACTAAAAGTGATTTGTGTT+TGG | + | chr8_4:24840393-24840412 | None:intergenic | 25.0% |
| !! | GTATTTTGTAGAATTGCTTT+TGG | + | chr8_4:24840430-24840449 | None:intergenic | 25.0% |
| ! | CAAAATCAATTATACATGTG+TGG | - | chr8_4:24840779-24840798 | Msa1320390:intron | 25.0% |
| ! | AAATGAAAATGTTTGGATGA+GGG | + | chr8_4:24840815-24840834 | None:intergenic | 25.0% |
| ! | AAAATGAAAATGTTTGGATG+AGG | + | chr8_4:24840816-24840835 | None:intergenic | 25.0% |
| ! | CACAGTTAATAACATACATA+AGG | + | chr8_4:24841360-24841379 | None:intergenic | 25.0% |
| !!! | GTGAGTTTTTCAAATTGTAA+GGG | - | chr8_4:24841411-24841430 | Msa1320390:intron | 25.0% |
| !!! | TTTCCTATTGAACCATTTTT+GGG | - | chr8_4:24841440-24841459 | Msa1320390:CDS | 25.0% |
| !! | TTAATACAATTCTTTGCTGT+GGG | - | chr8_4:24841499-24841518 | Msa1320390:intron | 25.0% |
| ! | GATGAAATAATTGCTCTATT+TGG | - | chr8_4:24841521-24841540 | Msa1320390:intron | 25.0% |
| ! | AATAATTGCTCTATTTGGAT+TGG | - | chr8_4:24841526-24841545 | Msa1320390:intron | 25.0% |
| ! | ATAATTGCTCTATTTGGATT+GGG | - | chr8_4:24841527-24841546 | Msa1320390:intron | 25.0% |
| ! | AATACTTGTTTCAGAACTTA+TGG | - | chr8_4:24841582-24841601 | Msa1320390:intron | 25.0% |
| !! | AAACGAGAGATATTCTAAAA+AGG | - | chr8_4:24841641-24841660 | Msa1320390:intron | 25.0% |
| !! | ATGGTTCTTTCAATTTTCAA+TGG | - | chr8_4:24841824-24841843 | Msa1320390:intron | 25.0% |
| !!! | CAATGTTTATTTTAGAGATG+AGG | - | chr8_4:24841887-24841906 | Msa1320390:intron | 25.0% |
| !!! | ATGTTTATTTTAGAGATGAG+GGG | - | chr8_4:24841889-24841908 | Msa1320390:intron | 25.0% |
| ! | AAAAAAAAAAAACATGGAGC+TGG | + | chr8_4:24842037-24842056 | None:intergenic | 25.0% |
| ! | TAAATACAGCTTGTATAGAA+AGG | - | chr8_4:24842159-24842178 | Msa1320390:intron | 25.0% |
| ! | AAATACAGCTTGTATAGAAA+GGG | - | chr8_4:24842160-24842179 | Msa1320390:intron | 25.0% |
| ! | AAAGTTCATCTAATTCATTC+AGG | - | chr8_4:24842192-24842211 | Msa1320390:intron | 25.0% |
| ! | AAGTTCATCTAATTCATTCA+GGG | - | chr8_4:24842193-24842212 | Msa1320390:intron | 25.0% |
| ! | AATATTACCTAAGCACTTAA+AGG | - | chr8_4:24842432-24842451 | Msa1320390:intron | 25.0% |
| ! | ATATTACCTAAGCACTTAAA+GGG | - | chr8_4:24842433-24842452 | Msa1320390:intron | 25.0% |
| !!! | TTTTAATTCATCACCCATTT+TGG | + | chr8_4:24842486-24842505 | None:intergenic | 25.0% |
| !!! | TCTATTTTAAGAGTGAAACT+AGG | - | chr8_4:24842860-24842879 | Msa1320390:intron | 25.0% |
| ! | TTGAAAAAATAAGTACGAGT+AGG | + | chr8_4:24842895-24842914 | None:intergenic | 25.0% |
| !!! | GTTTTTAAAAAAGAGAAGGT+GGG | + | chr8_4:24843141-24843160 | None:intergenic | 25.0% |
| !!! | TGTTTTTAAAAAAGAGAAGG+TGG | + | chr8_4:24843142-24843161 | None:intergenic | 25.0% |
| !! | AATTTGTCACAAAGATGTTT+TGG | - | chr8_4:24843251-24843270 | Msa1320390:intron | 25.0% |
| ! | TCAGATGAATAGATAAGAAA+AGG | - | chr8_4:24843307-24843326 | Msa1320390:intron | 25.0% |
| ! | CAGATGAATAGATAAGAAAA+GGG | - | chr8_4:24843308-24843327 | Msa1320390:intron | 25.0% |
| ! | TACAACAAAACAAATGTCTT+GGG | + | chr8_4:24843504-24843523 | None:intergenic | 25.0% |
| !!! | ATTTGTTTTGTTGTACAAGT+AGG | - | chr8_4:24843509-24843528 | Msa1320390:intron | 25.0% |
| !! | ATTCAAATTTTGCCAAGAAT+GGG | + | chr8_4:24843561-24843580 | None:intergenic | 25.0% |
| !! | AATTCAAATTTTGCCAAGAA+TGG | + | chr8_4:24843562-24843581 | None:intergenic | 25.0% |
| ! | ATTGACACACAAAAAAAAGA+AGG | + | chr8_4:24844098-24844117 | None:intergenic | 25.0% |
| !! | AATTTTCCTTCTTAAGAATC+TGG | - | chr8_4:24844115-24844134 | Msa1320390:five_prime_UTR | 25.0% |
| AATACTACTGTCTACTTACA+CGG | + | chr8_4:24839285-24839304 | None:intergenic | 30.0% | |
| !!! | ACAGTAGTATTGCGTTTTTT+AGG | - | chr8_4:24839294-24839313 | Msa1320390:three_prime_UTR | 30.0% |
| !!! | ATTTTATTTTTCAGTCTGGG+AGG | - | chr8_4:24839515-24839534 | Msa1320390:three_prime_UTR | 30.0% |
| TAAAAAAGAGAAAGGTGAGT+TGG | + | chr8_4:24839622-24839641 | None:intergenic | 30.0% | |
| !! | TACACCTCTAAAATCAATTC+TGG | + | chr8_4:24839867-24839886 | None:intergenic | 30.0% |
| ! | GCTTTTATCGAGTAGAATTT+AGG | - | chr8_4:24839907-24839926 | Msa1320390:intron | 30.0% |
| !! | TAGATTTTGGAAAAGCTACT+TGG | - | chr8_4:24840104-24840123 | Msa1320390:intron | 30.0% |
| ! | CTAAAAGTGATTTGTGTTTG+GGG | + | chr8_4:24840391-24840410 | None:intergenic | 30.0% |
| !!! | AAGCTACAATTTGTTGCTTT+TGG | + | chr8_4:24840640-24840659 | None:intergenic | 30.0% |
| !!! | TAGGTCAATATGTCTTGTTT+TGG | - | chr8_4:24841125-24841144 | Msa1320390:intron | 30.0% |
| !! | GGTGAGTTTTTCAAATTGTA+AGG | - | chr8_4:24841410-24841429 | Msa1320390:intron | 30.0% |
| ! | CTTTCCTATTGAACCATTTT+TGG | - | chr8_4:24841439-24841458 | Msa1320390:CDS | 30.0% |
| !! | TTCCTATTGAACCATTTTTG+GGG | - | chr8_4:24841441-24841460 | Msa1320390:CDS | 30.0% |
| CTTAATACAATTCTTTGCTG+TGG | - | chr8_4:24841498-24841517 | Msa1320390:intron | 30.0% | |
| ! | GAGATATTCTAAAAAGGTTG+AGG | - | chr8_4:24841647-24841666 | Msa1320390:intron | 30.0% |
| ! | ATATTCTAAAAAGGTTGAGG+TGG | - | chr8_4:24841650-24841669 | Msa1320390:intron | 30.0% |
| !! | TTTTCAATGGATTCTTGTCT+TGG | - | chr8_4:24841837-24841856 | Msa1320390:intron | 30.0% |
| ! | ATTTGTTGAATTGTAGTGAC+AGG | - | chr8_4:24841927-24841946 | Msa1320390:intron | 30.0% |
| TTATAGGAAAGATGAAGTCA+TGG | + | chr8_4:24842129-24842148 | None:intergenic | 30.0% | |
| AGTTAAAGCAGTATCAATGT+GGG | + | chr8_4:24842545-24842564 | None:intergenic | 30.0% | |
| ACAACCTTGTAAAATCATCT+CGG | - | chr8_4:24842829-24842848 | Msa1320390:intron | 30.0% | |
| ! | CTATATAGTTACTTTGCAGA+GGG | + | chr8_4:24842944-24842963 | None:intergenic | 30.0% |
| ! | ACTATATAGTTACTTTGCAG+AGG | + | chr8_4:24842945-24842964 | None:intergenic | 30.0% |
| CAGCACAAAAATAAAACACA+TGG | + | chr8_4:24843042-24843061 | None:intergenic | 30.0% | |
| AAGGGAAAACACTTACTAAT+TGG | - | chr8_4:24843326-24843345 | Msa1320390:intron | 30.0% | |
| GTTTGCTTGCAAATCTTTAT+TGG | - | chr8_4:24843367-24843386 | Msa1320390:intron | 30.0% | |
| ATGATCAGTACTAGGAAAAA+GGG | - | chr8_4:24843449-24843468 | Msa1320390:intron | 30.0% | |
| GTACAACAAAACAAATGTCT+TGG | + | chr8_4:24843505-24843524 | None:intergenic | 30.0% | |
| ! | TTCAAATTTTGCCAAGAATG+GGG | + | chr8_4:24843560-24843579 | None:intergenic | 30.0% |
| TTTGGGCATATTATTACTGT+TGG | - | chr8_4:24843735-24843754 | Msa1320390:intron | 30.0% | |
| TTATACACACATTTACACCT+AGG | + | chr8_4:24843873-24843892 | None:intergenic | 30.0% | |
| ACACACAAAAAAAAGAAGGA+AGG | + | chr8_4:24844094-24844113 | None:intergenic | 30.0% | |
| GACTTGCAAAACTTCAAACA+TGG | - | chr8_4:24839376-24839395 | Msa1320390:three_prime_UTR | 35.0% | |
| ! | TGCGAAAGGTGATGAAATTT+TGG | + | chr8_4:24839414-24839433 | None:intergenic | 35.0% |
| !! | CAATTTTGGAGGGAGAATAA+GGG | + | chr8_4:24840276-24840295 | None:intergenic | 35.0% |
| !! | TCAATTTTGGAGGGAGAATA+AGG | + | chr8_4:24840277-24840296 | None:intergenic | 35.0% |
| AGAGTCAAAAGTGATTCTAG+AGG | + | chr8_4:24840737-24840756 | None:intergenic | 35.0% | |
| !! | AGAATCACTTTTGACTCTCT+AGG | - | chr8_4:24840739-24840758 | Msa1320390:intron | 35.0% |
| TACCCCAAAAATGGTTCAAT+AGG | + | chr8_4:24841446-24841465 | None:intergenic | 35.0% | |
| !!! | AACCATTTTTGGGGTATTCT+TGG | - | chr8_4:24841450-24841469 | Msa1320390:CDS | 35.0% |
| TCTCCTTTGTGTTTATGCTA+TGG | - | chr8_4:24841805-24841824 | Msa1320390:intron | 35.0% | |
| GAACCATAGCATAAACACAA+AGG | + | chr8_4:24841811-24841830 | None:intergenic | 35.0% | |
| ! | TAGTGACAGGTACTCTAAAA+GGG | - | chr8_4:24841940-24841959 | Msa1320390:intron | 35.0% |
| !! | GAAGCTGTTGAGTTTTTAAG+AGG | - | chr8_4:24841993-24842012 | Msa1320390:intron | 35.0% |
| AAAAGTCCCTTTAAGTGCTT+AGG | + | chr8_4:24842442-24842461 | None:intergenic | 35.0% | |
| GAGTTAAAGCAGTATCAATG+TGG | + | chr8_4:24842546-24842565 | None:intergenic | 35.0% | |
| GAAAGTTCAGTCATGCAATA+TGG | - | chr8_4:24842639-24842658 | Msa1320390:intron | 35.0% | |
| CTCAATACACTTGACATGAA+AGG | + | chr8_4:24842753-24842772 | None:intergenic | 35.0% | |
| ! | TTTGCCGAGATGATTTTACA+AGG | + | chr8_4:24842836-24842855 | None:intergenic | 35.0% |
| ! | TGTAGTTTTCAGTGGATCAT+CGG | + | chr8_4:24843071-24843090 | None:intergenic | 35.0% |
| TACAATTAAGCCAAGACTTC+TGG | + | chr8_4:24843101-24843120 | None:intergenic | 35.0% | |
| CACTTACTAATTGGAACTGA+TGG | - | chr8_4:24843335-24843354 | Msa1320390:intron | 35.0% | |
| GATGATCAGTACTAGGAAAA+AGG | - | chr8_4:24843448-24843467 | Msa1320390:intron | 35.0% | |
| ATACCTTCTATGTTGCTAAC+CGG | - | chr8_4:24843894-24843913 | Msa1320390:intron | 35.0% | |
| AAGTAGATCACAATGATGGT+TGG | + | chr8_4:24843938-24843957 | None:intergenic | 35.0% | |
| AACCATCATTGTGATCTACT+TGG | - | chr8_4:24843937-24843956 | Msa1320390:intron | 35.0% | |
| TACCAAGTAGATCACAATGA+TGG | + | chr8_4:24843942-24843961 | None:intergenic | 35.0% | |
| ACTTGTCCAGATTCTTAAGA+AGG | + | chr8_4:24844124-24844143 | None:intergenic | 35.0% | |
| CACGGTTCACTGTTTGAAAA+TGG | + | chr8_4:24839351-24839370 | None:intergenic | 40.0% | |
| ! | TTGTTTGGTTCCACTTCTAG+AGG | - | chr8_4:24839839-24839858 | Msa1320390:intron | 40.0% |
| ! | TGTTTGGTTCCACTTCTAGA+GGG | - | chr8_4:24839840-24839859 | Msa1320390:intron | 40.0% |
| !! | GGGTCCAGAATTGATTTTAG+AGG | - | chr8_4:24839860-24839879 | Msa1320390:intron | 40.0% |
| TACAAGGAGCTCAAGTGTAA+GGG | + | chr8_4:24840072-24840091 | None:intergenic | 40.0% | |
| ATACAAGGAGCTCAAGTGTA+AGG | + | chr8_4:24840073-24840092 | None:intergenic | 40.0% | |
| ! | GAATAAGGGTCCGTTTGTTT+TGG | + | chr8_4:24840262-24840281 | None:intergenic | 40.0% |
| AAGCTGAACTAGTTGTGCAT+GGG | + | chr8_4:24840473-24840492 | None:intergenic | 40.0% | |
| ACATGTGTCTTTGCAGTGTT+TGG | - | chr8_4:24840847-24840866 | Msa1320390:intron | 40.0% | |
| TGTTTGGTATCTGTGTCTGT+CGG | - | chr8_4:24840863-24840882 | Msa1320390:intron | 40.0% | |
| CACCAAGAATACCCCAAAAA+TGG | + | chr8_4:24841455-24841474 | None:intergenic | 40.0% | |
| ! | CTCTATTTGGATTGGGTTCT+AGG | - | chr8_4:24841534-24841553 | Msa1320390:intron | 40.0% |
| !!! | TTGGATTGGGTTCTAGGTTT+TGG | - | chr8_4:24841540-24841559 | Msa1320390:intron | 40.0% |
| !!! | TGGATTGGGTTCTAGGTTTT+GGG | - | chr8_4:24841541-24841560 | Msa1320390:intron | 40.0% |
| TCCTTAAACGTTCGCAGTTA+TGG | - | chr8_4:24841611-24841630 | Msa1320390:intron | 40.0% | |
| TCCATAACTGCGAACGTTTA+AGG | + | chr8_4:24841615-24841634 | None:intergenic | 40.0% | |
| ! | TCAATGGATTCTTGTCTTGG+AGG | - | chr8_4:24841840-24841859 | Msa1320390:intron | 40.0% |
| GTAGTGACAGGTACTCTAAA+AGG | - | chr8_4:24841939-24841958 | Msa1320390:intron | 40.0% | |
| AAAACTCAACAGCTTCATCC+AGG | + | chr8_4:24841989-24842008 | None:intergenic | 40.0% | |
| CATTCAGGGCATATGATTGT+TGG | - | chr8_4:24842207-24842226 | Msa1320390:intron | 40.0% | |
| ! | GTAGTTTTCAGTGGATCATC+GGG | + | chr8_4:24843070-24843089 | None:intergenic | 40.0% |
| ! | GTCTGATCTGTAGTTTTCAG+TGG | + | chr8_4:24843079-24843098 | None:intergenic | 40.0% |
| !! | TCCTAGTACTGATCATCATG+TGG | + | chr8_4:24843445-24843464 | None:intergenic | 40.0% |
| !!! | CTAGTTTTACTCCCCATTCT+TGG | - | chr8_4:24843546-24843565 | Msa1320390:intron | 40.0% |
| TACCTTCTATGTTGCTAACC+GGG | - | chr8_4:24843895-24843914 | Msa1320390:intron | 40.0% | |
| GTAACTAAAATGACGAGACC+CGG | + | chr8_4:24843916-24843935 | None:intergenic | 40.0% | |
| TATAATGCGAGTTCAGATGC+TGG | - | chr8_4:24844043-24844062 | Msa1320390:five_prime_UTR | 40.0% | |
| ATAATGCGAGTTCAGATGCT+GGG | - | chr8_4:24844044-24844063 | Msa1320390:five_prime_UTR | 40.0% | |
| ! | AGTTTTGCAAGTCTCGCTCA+CGG | + | chr8_4:24839369-24839388 | None:intergenic | 45.0% |
| TGGGAGGAAAGAAACTGTTC+TGG | - | chr8_4:24839531-24839550 | Msa1320390:three_prime_UTR | 45.0% | |
| GGTGTTCAAGTCAAGCTTAC+TGG | - | chr8_4:24839577-24839596 | Msa1320390:CDS | 45.0% | |
| GTTCAAGTCAAGCTTACTGG+TGG | - | chr8_4:24839580-24839599 | Msa1320390:CDS | 45.0% | |
| ! | AATTCTGGACCCTCTAGAAG+TGG | + | chr8_4:24839852-24839871 | None:intergenic | 45.0% |
| AGCTGAACTAGTTGTGCATG+GGG | + | chr8_4:24840472-24840491 | None:intergenic | 45.0% | |
| GAAGCTGAACTAGTTGTGCA+TGG | + | chr8_4:24840474-24840493 | None:intergenic | 45.0% | |
| !!! | GGATTGGGTTCTAGGTTTTG+GGG | - | chr8_4:24841542-24841561 | Msa1320390:intron | 45.0% |
| !!! | GATTGGGTTCTAGGTTTTGG+GGG | - | chr8_4:24841543-24841562 | Msa1320390:intron | 45.0% |
| CCAGGACAAGGTTAAGTAAC+TGG | + | chr8_4:24841971-24841990 | None:intergenic | 45.0% | |
| CCAGTTACTTAACCTTGTCC+TGG | - | chr8_4:24841968-24841987 | Msa1320390:intron | 45.0% | |
| TGGCTTTCGCTGTCACAATT+TGG | + | chr8_4:24842466-24842485 | None:intergenic | 45.0% | |
| TGTGACAGCGAAAGCCAAAA+TGG | - | chr8_4:24842469-24842488 | Msa1320390:intron | 45.0% | |
| GTGACAGCGAAAGCCAAAAT+GGG | - | chr8_4:24842470-24842489 | Msa1320390:intron | 45.0% | |
| GCATGACTGAACTTTCAAGC+AGG | + | chr8_4:24842635-24842654 | None:intergenic | 45.0% | |
| ACAGATCAGACCAGAAGTCT+TGG | - | chr8_4:24843088-24843107 | Msa1320390:intron | 45.0% | |
| GCCACATGATGATCAGTACT+AGG | - | chr8_4:24843441-24843460 | Msa1320390:intron | 45.0% | |
| TCAGTACTAGGAAAAAGGGC+AGG | - | chr8_4:24843453-24843472 | Msa1320390:intron | 45.0% | |
| ! | TTTTGCTGGGATGACAAAGC+AGG | - | chr8_4:24843711-24843730 | Msa1320390:intron | 45.0% |
| ! | TGGGATGACAAAGCAGGTTT+TGG | - | chr8_4:24843717-24843736 | Msa1320390:intron | 45.0% |
| ! | GGGATGACAAAGCAGGTTTT+GGG | - | chr8_4:24843718-24843737 | Msa1320390:intron | 45.0% |
| !! | AACTGCTTTTGTCGCAATGC+AGG | - | chr8_4:24843763-24843782 | Msa1320390:intron | 45.0% |
| GATTGCAAACCCCTTTCTTG+AGG | - | chr8_4:24843838-24843857 | Msa1320390:CDS | 45.0% | |
| !!! | ATTTTGAAATTTATAAATTT+TGG | - | chr8_4:24842091-24842110 | Msa1320390:intron | 5.0% |
| !!! | AATTTTTTAAGAAAATTAAA+AGG | + | chr8_4:24842259-24842278 | None:intergenic | 5.0% |
| !!! | TTTTTTAAAAACATAATTTA+TGG | - | chr8_4:24843149-24843168 | Msa1320390:intron | 5.0% |
| AAGCTTACTGGTGGCAGACA+AGG | - | chr8_4:24839589-24839608 | Msa1320390:CDS | 50.0% | |
| ! | GGGGTATTCTTGGTGAGCAT+TGG | - | chr8_4:24841460-24841479 | Msa1320390:CDS | 50.0% |
| CAACAGCTTCATCCAGGACA+AGG | + | chr8_4:24841983-24842002 | None:intergenic | 50.0% | |
| TTGTCGCAATGCAGGTTTGC+AGG | - | chr8_4:24843771-24843790 | Msa1320390:intron | 50.0% | |
| TGTCGCAATGCAGGTTTGCA+GGG | - | chr8_4:24843772-24843791 | Msa1320390:intron | 50.0% | |
| ATGCTTGTGTCGCCAACTGA+TGG | - | chr8_4:24843806-24843825 | Msa1320390:intron | 50.0% | |
| TGTGTCGCCAACTGATGGTA+CGG | - | chr8_4:24843811-24843830 | Msa1320390:intron | 50.0% | |
| ATCTCGTCCGTACCATCAGT+TGG | + | chr8_4:24843821-24843840 | None:intergenic | 50.0% | |
| AACCCCTTTCTTGAGGCAGA+TGG | - | chr8_4:24843845-24843864 | Msa1320390:CDS | 50.0% | |
| ACCCCTTTCTTGAGGCAGAT+GGG | - | chr8_4:24843846-24843865 | Msa1320390:CDS | 50.0% | |
| GACCCGGTTAGCAACATAGA+AGG | + | chr8_4:24843900-24843919 | None:intergenic | 50.0% | |
| GTCGCAATGCAGGTTTGCAG+GGG | - | chr8_4:24843773-24843792 | Msa1320390:intron | 55.0% | |
| CCCCATCTGCCTCAAGAAAG+GGG | + | chr8_4:24843850-24843869 | None:intergenic | 55.0% | |
| CCCCTTTCTTGAGGCAGATG+GGG | - | chr8_4:24843847-24843866 | Msa1320390:CDS | 55.0% | |
| GCCCCATCTGCCTCAAGAAA+GGG | + | chr8_4:24843851-24843870 | None:intergenic | 55.0% | |
| GGCCCCATCTGCCTCAAGAA+AGG | + | chr8_4:24843852-24843871 | None:intergenic | 60.0% | |
| TCTTGAGGCAGATGGGGCCT+AGG | - | chr8_4:24843853-24843872 | Msa1320390:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 24839282 | 24844146 | 24839282 | ID=Msa1320390;Name=Msa1320390 |
| chr8_4 | mRNA | 24839282 | 24844146 | 24839282 | ID=Msa1320390-mRNA-1;Parent=Msa1320390;Name=Msa1320390-mRNA-1;_AED=0.02;_eAED=0.02;_QI=113|1|1|1|1|1|5|272|99 |
| chr8_4 | exon | 24839282 | 24839643 | 24839282 | ID=Msa1320390-mRNA-1:exon:8514;Parent=Msa1320390-mRNA-1 |
| chr8_4 | exon | 24840311 | 24840363 | 24840311 | ID=Msa1320390-mRNA-1:exon:8513;Parent=Msa1320390-mRNA-1 |
| chr8_4 | exon | 24841414 | 24841485 | 24841414 | ID=Msa1320390-mRNA-1:exon:8512;Parent=Msa1320390-mRNA-1 |
| chr8_4 | exon | 24843818 | 24843899 | 24843818 | ID=Msa1320390-mRNA-1:exon:8511;Parent=Msa1320390-mRNA-1 |
| chr8_4 | exon | 24844031 | 24844146 | 24844031 | ID=Msa1320390-mRNA-1:exon:8510;Parent=Msa1320390-mRNA-1 |
| chr8_4 | five_prime_UTR | 24844034 | 24844146 | 24844034 | ID=Msa1320390-mRNA-1:five_prime_utr;Parent=Msa1320390-mRNA-1 |
| chr8_4 | CDS | 24844031 | 24844033 | 24844031 | ID=Msa1320390-mRNA-1:cds;Parent=Msa1320390-mRNA-1 |
| chr8_4 | CDS | 24843818 | 24843899 | 24843818 | ID=Msa1320390-mRNA-1:cds;Parent=Msa1320390-mRNA-1 |
| chr8_4 | CDS | 24841414 | 24841485 | 24841414 | ID=Msa1320390-mRNA-1:cds;Parent=Msa1320390-mRNA-1 |
| chr8_4 | CDS | 24840311 | 24840363 | 24840311 | ID=Msa1320390-mRNA-1:cds;Parent=Msa1320390-mRNA-1 |
| chr8_4 | CDS | 24839554 | 24839643 | 24839554 | ID=Msa1320390-mRNA-1:cds;Parent=Msa1320390-mRNA-1 |
| chr8_4 | three_prime_UTR | 24839282 | 24839553 | 24839282 | ID=Msa1320390-mRNA-1:three_prime_utr;Parent=Msa1320390-mRNA-1 |
| Gene Sequence |
| Protein sequence |
