AlfalfaGEDB | Msa0659140

M. sativa cultivar zhongmu-4 / Msa0659140

KEGG: -
GO: GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006950 GO:0006979 GO:0008150 GO:0010035 GO:0010038 GO:0010039 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0050896
PFAM: PF01722.21

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0659140	XP_003630182.1	98.925	93	1	0	1	93	1	93	3.92e-60	188

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0659140	sp\|Q9FIC3\|BOLA2_ARATH	86.076	79	11	0	3	81	2	80	3.20e-45	143

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0659140	G7LC99	98.925	93	1	0	1	93	1	93	1.87e-60	188

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0000590	Msa0659140	0.806280	8.879371e-50	-8.615850e-47
Msa0006880	Msa0659140	0.851168	1.057713e-60	-8.615850e-47
Msa0008840	Msa0659140	0.818663	1.743241e-52	-8.615850e-47
Msa0027580	Msa0659140	0.834073	3.699976e-56	-8.615850e-47
Msa0029260	Msa0659140	0.807473	4.968447e-50	-8.615850e-47
Msa0031510	Msa0659140	0.823668	1.223769e-53	-8.615850e-47
Msa0036370	Msa0659140	0.816273	6.020228e-52	-8.615850e-47
Msa0052350	Msa0659140	-0.806151	9.455895e-50	-8.615850e-47
Msa0055150	Msa0659140	0.846077	2.723513e-59	-8.615850e-47
Msa0057140	Msa0659140	0.801953	7.059592e-49	-8.615850e-47
Msa0061970	Msa0659140	0.811672	6.228379e-51	-8.615850e-47
Msa0075340	Msa0659140	0.836589	8.564792e-57	-8.615850e-47
Msa0090030	Msa0659140	0.830821	2.366879e-55	-8.615850e-47
Msa0094010	Msa0659140	0.808053	3.740792e-50	-8.615850e-47
Msa0101180	Msa0659140	0.824985	5.998876e-54	-8.615850e-47
Msa0103070	Msa0659140	0.800475	1.416694e-48	-8.615850e-47
Msa0111330	Msa0659140	0.824560	7.555127e-54	-8.615850e-47
Msa0115370	Msa0659140	0.802998	4.299956e-49	-8.615850e-47
Msa0120540	Msa0659140	0.803561	3.286756e-49	-8.615850e-47
Msa0603670	Msa0659140	0.801306	9.583862e-49	-8.615850e-47
Msa0607510	Msa0659140	0.838805	2.311749e-57	-8.615850e-47
Msa0609000	Msa0659140	0.836356	9.818046e-57	-8.615850e-47
Msa0609220	Msa0659140	0.801850	7.413011e-49	-8.615850e-47
Msa0609970	Msa0659140	0.849761	2.627246e-60	-8.615850e-47
Msa0610390	Msa0659140	0.833784	4.370211e-56	-8.615850e-47
Msa0614990	Msa0659140	0.857918	1.176665e-62	-8.615850e-47
Msa0615660	Msa0659140	0.816261	6.057431e-52	-8.615850e-47
Msa0615680	Msa0659140	0.818304	2.102415e-52	-8.615850e-47
Msa0618930	Msa0659140	0.813300	2.744985e-51	-8.615850e-47
Msa0619920	Msa0659140	0.812091	5.047120e-51	-8.615850e-47
Msa0626680	Msa0659140	0.814203	1.736552e-51	-8.615850e-47
Msa0626940	Msa0659140	0.829999	3.757919e-55	-8.615850e-47
Msa0650620	Msa0659140	0.851921	6.478036e-61	-8.615850e-47
Msa0650920	Msa0659140	0.815688	8.130558e-52	-8.615850e-47
Msa0651930	Msa0659140	0.818537	1.861409e-52	-8.615850e-47
Msa0659140	Msa0663900	0.819268	1.269461e-52	-8.615850e-47
Msa0659140	Msa0664760	0.825834	3.775405e-54	-8.615850e-47
Msa0659140	Msa0664960	0.808944	2.414952e-50	-8.615850e-47
Msa0659140	Msa0669720	0.806682	7.307287e-50	-8.615850e-47
Msa0659140	Msa0687230	0.819586	1.074444e-52	-8.615850e-47
Msa0659140	Msa0687630	0.810240	1.272045e-50	-8.615850e-47
Msa0659140	Msa0693790	0.827880	1.225356e-54	-8.615850e-47
Msa0659140	Msa0699190	0.810507	1.113666e-50	-8.615850e-47
Msa0659140	Msa0702150	0.803846	2.869296e-49	-8.615850e-47
Msa0659140	Msa0704800	0.823074	1.684298e-53	-8.615850e-47
Msa0659140	Msa0705600	0.976939	8.533212e-143	-8.615850e-47
Msa0659140	Msa0706390	0.802601	5.192559e-49	-8.615850e-47
Msa0659140	Msa0707390	0.840114	1.056845e-57	-8.615850e-47
Msa0659140	Msa0711490	0.824007	1.019159e-53	-8.615850e-47
Msa0659140	Msa0735310	0.826994	1.998212e-54	-8.615850e-47
Msa0659140	Msa0774750	0.820456	6.793493e-53	-8.615850e-47
Msa0659140	Msa0794050	0.809088	2.249235e-50	-8.615850e-47
Msa0659140	Msa0806920	0.854338	1.315500e-61	-8.615850e-47
Msa0659140	Msa0814250	0.819839	9.407580e-53	-8.615850e-47
Msa0659140	Msa0818770	0.803973	2.699319e-49	-8.615850e-47
Msa0659140	Msa0874500	0.803088	4.119526e-49	-8.615850e-47
Msa0659140	Msa0879860	0.824380	8.327624e-54	-8.615850e-47
Msa0659140	Msa0895310	0.849550	3.008797e-60	-8.615850e-47
Msa0659140	Msa0898890	0.810758	9.830305e-51	-8.615850e-47
Msa0659140	Msa0921870	0.819095	1.390550e-52	-8.615850e-47
Msa0659140	Msa0924150	-0.837291	5.667933e-57	-8.615850e-47
Msa0659140	Msa0943270	0.823164	1.605180e-53	-8.615850e-47
Msa0659140	Msa0957450	-0.827898	1.213025e-54	-8.615850e-47
Msa0659140	Msa0960830	0.801972	6.996768e-49	-8.615850e-47
Msa0659140	Msa0974810	0.824312	8.643440e-54	-8.615850e-47
Msa0659140	Msa1003440	0.817940	2.540816e-52	-8.615850e-47
Msa0659140	Msa1025260	0.827384	1.611638e-54	-8.615850e-47
Msa0659140	Msa1025940	0.835805	1.355051e-56	-8.615850e-47
Msa0659140	Msa1030930	0.801641	8.181796e-49	-8.615850e-47
Msa0659140	Msa1033520	0.805447	1.329280e-49	-8.615850e-47
Msa0659140	Msa1067070	0.814732	1.326001e-51	-8.615850e-47
Msa0659140	Msa1070050	0.807753	4.332839e-50	-8.615850e-47
Msa0659140	Msa1073400	0.864306	1.337415e-64	-8.615850e-47
Msa0659140	Msa1083880	0.801469	8.874869e-49	-8.615850e-47
Msa0659140	Msa1089840	0.839617	1.423232e-57	-8.615850e-47
Msa0659140	Msa1094430	0.859889	3.026321e-63	-8.615850e-47
Msa0659140	Msa1096230	0.814817	1.269842e-51	-8.615850e-47
Msa0659140	Msa1098720	-0.801069	1.071510e-48	-8.615850e-47
Msa0659140	Msa1109350	0.818748	1.667157e-52	-8.615850e-47
Msa0659140	Msa1113880	0.841268	5.267540e-58	-8.615850e-47
Msa0659140	Msa1126120	-0.810292	1.239451e-50	-8.615850e-47
Msa0659140	Msa1126850	0.835463	1.653885e-56	-8.615850e-47
Msa0659140	Msa1133250	0.806750	7.067597e-50	-8.615850e-47
Msa0659140	Msa1135800	-0.825596	4.301077e-54	-8.615850e-47
Msa0659140	Msa1135810	-0.825067	5.735730e-54	-8.615850e-47
Msa0659140	Msa1138870	0.801217	9.992108e-49	-8.615850e-47
Msa0659140	Msa1160360	0.829996	3.765900e-55	-8.615850e-47
Msa0659140	Msa1166870	0.811426	7.041515e-51	-8.615850e-47
Msa0659140	Msa1171770	-0.811210	7.845676e-51	-8.615850e-47
Msa0659140	Msa1184370	0.814625	1.400810e-51	-8.615850e-47
Msa0659140	Msa1200320	0.812408	4.304405e-51	-8.615850e-47
Msa0659140	Msa1201830	0.812591	3.925754e-51	-8.615850e-47
Msa0659140	Msa1203880	0.801441	8.991383e-49	-8.615850e-47
Msa0659140	Msa1211830	0.813350	2.676271e-51	-8.615850e-47
Msa0659140	Msa1227690	0.814624	1.400993e-51	-8.615850e-47
Msa0659140	Msa1234980	0.837507	4.991832e-57	-8.615850e-47
Msa0659140	Msa1253400	0.816194	6.271111e-52	-8.615850e-47
Msa0659140	Msa1253810	0.862013	6.845450e-64	-8.615850e-47
Msa0659140	Msa1269300	0.836529	8.873886e-57	-8.615850e-47
Msa0659140	Msa1294840	0.812657	3.796456e-51	-8.615850e-47
Msa0659140	Msa1296830	0.800790	1.221759e-48	-8.615850e-47
Msa0659140	Msa1297600	0.808000	3.839669e-50	-8.615850e-47
Msa0659140	Msa1299700	0.811369	7.245323e-51	-8.615850e-47
Msa0659140	Msa1310660	0.803192	3.919378e-49	-8.615850e-47
Msa0659140	Msa1310690	0.836542	8.805343e-57	-8.615850e-47
Msa0659140	Msa1338610	0.808655	2.784273e-50	-8.615850e-47
Msa0659140	Msa1340830	0.800623	1.321396e-48	-8.615850e-47
Msa0659140	Msa1363700	0.832293	1.026799e-55	-8.615850e-47
Msa0659140	Msa1365860	0.830510	2.820734e-55	-8.615850e-47
Msa0659140	Msa1366650	0.811160	8.043018e-51	-8.615850e-47
Msa0659140	Msa1371090	0.820965	5.189089e-53	-8.615850e-47
Msa0659140	Msa1372310	0.824896	6.295449e-54	-8.615850e-47
Msa0659140	Msa1404190	0.817650	2.953522e-52	-8.615850e-47
Msa0659140	Msa1408150	0.844779	6.120452e-59	-8.615850e-47
Msa0659140	Msa1418960	-0.811976	5.345949e-51	-8.615850e-47
Msa0659140	Msa1438640	0.813475	2.512670e-51	-8.615850e-47
Msa0659140	Msa1452470	0.820121	8.106271e-53	-8.615850e-47
Msa0659140	Msa1452570	0.808871	2.502666e-50	-8.615850e-47
Msa0659140	Msa1465480	0.803149	4.000165e-49	-8.615850e-47
Msa0659140	Msa1465960	0.818250	2.162094e-52	-8.615850e-47
Msa0121820	Msa0659140	0.826669	2.389892e-54	-8.615850e-47
Msa0126520	Msa0659140	0.820546	6.478180e-53	-8.615850e-47
Msa0131450	Msa0659140	0.823750	1.170781e-53	-8.615850e-47
Msa0140400	Msa0659140	0.809845	1.546680e-50	-8.615850e-47
Msa0145150	Msa0659140	0.809271	2.054775e-50	-8.615850e-47
Msa0145950	Msa0659140	0.800733	1.255108e-48	-8.615850e-47
Msa0152840	Msa0659140	0.813519	2.457164e-51	-8.615850e-47
Msa0155430	Msa0659140	0.802363	5.813564e-49	-8.615850e-47
Msa0165950	Msa0659140	0.804806	1.810454e-49	-8.615850e-47
Msa0166750	Msa0659140	0.850161	2.030584e-60	-8.615850e-47
Msa0169300	Msa0659140	0.800967	1.124209e-48	-8.615850e-47
Msa0178990	Msa0659140	0.803552	3.300622e-49	-8.615850e-47
Msa0180120	Msa0659140	0.803046	4.201835e-49	-8.615850e-47
Msa0182280	Msa0659140	0.806222	9.135484e-50	-8.615850e-47
Msa0183460	Msa0659140	0.896523	3.400413e-76	-8.615850e-47
Msa0183870	Msa0659140	0.803135	4.027861e-49	-8.615850e-47
Msa0186310	Msa0659140	0.838072	3.572954e-57	-8.615850e-47
Msa0186770	Msa0659140	0.810359	1.199022e-50	-8.615850e-47
Msa0193600	Msa0659140	0.813828	2.100744e-51	-8.615850e-47
Msa0198940	Msa0659140	0.823505	1.336022e-53	-8.615850e-47
Msa0208810	Msa0659140	0.835422	1.693583e-56	-8.615850e-47
Msa0212750	Msa0659140	-0.818594	1.806532e-52	-8.615850e-47
Msa0236270	Msa0659140	0.822019	2.963341e-53	-8.615850e-47
Msa0364990	Msa0659140	0.801834	7.468307e-49	-8.615850e-47
Msa0384880	Msa0659140	0.818328	2.075951e-52	-8.615850e-47
Msa0386040	Msa0659140	0.812107	5.007383e-51	-8.615850e-47
Msa0387910	Msa0659140	0.815811	7.635353e-52	-8.615850e-47
Msa0392940	Msa0659140	0.818620	1.782920e-52	-8.615850e-47
Msa0394400	Msa0659140	0.829616	4.659055e-55	-8.615850e-47
Msa0408240	Msa0659140	-0.801773	7.684917e-49	-8.615850e-47
Msa0416400	Msa0659140	0.805189	1.505597e-49	-8.615850e-47
Msa0419520	Msa0659140	0.846127	2.639928e-59	-8.615850e-47
Msa0429950	Msa0659140	0.802493	5.464922e-49	-8.615850e-47
Msa0431770	Msa0659140	0.802545	5.331796e-49	-8.615850e-47
Msa0436190	Msa0659140	0.811202	7.875341e-51	-8.615850e-47
Msa0439890	Msa0659140	0.826912	2.090860e-54	-8.615850e-47
Msa0449820	Msa0659140	0.829965	3.830350e-55	-8.615850e-47
Msa0465550	Msa0659140	0.811794	5.856762e-51	-8.615850e-47
Msa0469790	Msa0659140	0.806926	6.489213e-50	-8.615850e-47
Msa0239940	Msa0659140	0.801741	7.804774e-49	-8.615850e-47
Msa0241740	Msa0659140	0.837411	5.279907e-57	-8.615850e-47
Msa0242680	Msa0659140	0.802029	6.809560e-49	-8.615850e-47
Msa0259160	Msa0659140	0.811455	6.941797e-51	-8.615850e-47
Msa0273650	Msa0659140	0.811560	6.587888e-51	-8.615850e-47
Msa0280430	Msa0659140	0.815465	9.119706e-52	-8.615850e-47
Msa0288730	Msa0659140	0.814542	1.461150e-51	-8.615850e-47
Msa0291520	Msa0659140	0.810552	1.089139e-50	-8.615850e-47
Msa0304590	Msa0659140	0.822664	2.099248e-53	-8.615850e-47
Msa0304660	Msa0659140	0.834383	3.093953e-56	-8.615850e-47
Msa0308220	Msa0659140	0.823275	1.511935e-53	-8.615850e-47
Msa0310410	Msa0659140	0.811333	7.376489e-51	-8.615850e-47
Msa0331700	Msa0659140	0.832508	9.081043e-56	-8.615850e-47
Msa0337510	Msa0659140	0.800193	1.616526e-48	-8.615850e-47
Msa0347680	Msa0659140	0.842975	1.862360e-58	-8.615850e-47
Msa0493920	Msa0659140	0.835862	1.310507e-56	-8.615850e-47
Msa0524600	Msa0659140	0.821997	2.997383e-53	-8.615850e-47
Msa0527910	Msa0659140	0.825288	5.087327e-54	-8.615850e-47
Msa0534080	Msa0659140	0.801830	7.480985e-49	-8.615850e-47
Msa0550540	Msa0659140	0.805726	1.161660e-49	-8.615850e-47
Msa0550570	Msa0659140	0.810887	9.216716e-51	-8.615850e-47
Msa0578090	Msa0659140	0.824933	6.169950e-54	-8.615850e-47
Msa0579370	Msa0659140	0.811805	5.826332e-51	-8.615850e-47
Msa0580950	Msa0659140	0.836392	9.613786e-57	-8.615850e-47
Msa0586850	Msa0659140	0.823634	1.246600e-53	-8.615850e-47
Msa0602370	Msa0659140	0.808487	3.023290e-50	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0659140	MtrunA17_Chr8g0383761	98.925	93	1	0	1	93	1	93	3.61e-64	188

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0659140	AT5G09830.1	86.076	79	11	0	3	81	2	80	3.25e-46	143

Find 45 sgRNAs with CRISPR-Local

Find 272 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CTTGGAAAGAATTAAAATTT+AGG	0.183954	4_3:+69445329	None:intergenic
CAGAACAATTTGAAGGAAAA+AGG	0.220014	4_3:-69445810	Msa0659140:CDS
CGGCAGAAAGGTCAGAGAAA+TGG	0.397569	4_3:-69447419	Msa0659140:exon
GCGAATATATATTTCACAAA+AGG	0.408615	4_3:-69447464	Msa0659140:five_prime_UTR
TCTAGGCCGCGGGATTTGAT+TGG	0.417750	4_3:+69445668	None:intergenic
ACAAAGTGCTTGACTTTCAG+TGG	0.429776	4_3:-69445524	Msa0659140:three_prime_UTR
AAATCCTTACAATATGTTGC+TGG	0.434932	4_3:-69445623	Msa0659140:three_prime_UTR
AAACAATGCATGACTTATGA+AGG	0.436982	4_3:-69445398	Msa0659140:three_prime_UTR
ATTGTTTCAGAACAATTTGA+AGG	0.440449	4_3:-69445817	Msa0659140:CDS
CAGGAAGTAACTGATATATC+TGG	0.443253	4_3:-69445974	Msa0659140:CDS
CGAATATATATTTCACAAAA+GGG	0.449851	4_3:-69447463	Msa0659140:five_prime_UTR
GGCAGAAAGGTCAGAGAAAT+GGG	0.453846	4_3:-69447418	Msa0659140:exon
AAGATGGGAAGGGTTGAGTC+TGG	0.467675	4_3:+69447360	None:intergenic
TTCCACGTAAAGAATGAACT+TGG	0.476934	4_3:+69445311	None:intergenic
GGCCGCGGGATTTGATTGGT+TGG	0.488296	4_3:+69445672	None:intergenic
GTGAACGACAAAATAGGATA+AGG	0.493589	4_3:-69447540	None:intergenic
ACTGCCAGCAACATATTGTA+AGG	0.497239	4_3:+69445619	None:intergenic
CTCTTTCATTTCCTCCTCCA+AGG	0.499465	4_3:+69445756	None:intergenic
ATATTATATGCTCTAGGCCG+CGG	0.500284	4_3:+69445657	None:intergenic
TATGTTGCTGGCAGTATTTG+TGG	0.513595	4_3:-69445611	Msa0659140:three_prime_UTR
AATGGTGAATGCTGCCTTGG+AGG	0.528246	4_3:-69445770	Msa0659140:CDS
ATCGATCCGCGTGTGAGCAA+CGG	0.537897	4_3:-69447498	Msa0659140:five_prime_UTR
GAAAGAAAAGCTTACAAGAT+GGG	0.541620	4_3:+69447345	None:intergenic
TCGAATGGTGAATGCTGCCT+TGG	0.542792	4_3:-69445773	Msa0659140:CDS
TATTATATGCTCTAGGCCGC+GGG	0.543659	4_3:+69445658	None:intergenic
CAAAGTGCTTGACTTTCAGT+GGG	0.546228	4_3:-69445523	Msa0659140:three_prime_UTR
GAAAAGCTTACAAGATGGGA+AGG	0.546986	4_3:+69447349	None:intergenic
TTATAGATATTATATGCTCT+AGG	0.550750	4_3:+69445651	None:intergenic
GTATTGCTCAATAGAGATGA+AGG	0.567760	4_3:-69445461	Msa0659140:three_prime_UTR
CAGAGAAATGGGTGTGACAA+AGG	0.570077	4_3:-69447407	Msa0659140:exon
TTCCAAGTTCATTCTTTACG+TGG	0.590894	4_3:-69445313	Msa0659140:three_prime_UTR
GAAATTGAAGAACGGCAGAA+AGG	0.590979	4_3:-69447431	Msa0659140:five_prime_UTR
GGTGAATGCTGCCTTGGAGG+AGG	0.603126	4_3:-69445767	Msa0659140:CDS
AACTTGCCGTTGCTCACACG+CGG	0.606776	4_3:+69447492	None:intergenic
AACTTGTTGACTTGAATGCG+TGG	0.616658	4_3:-69445286	Msa0659140:three_prime_UTR
GAAGTAACTGATATATCTGG+AGG	0.618293	4_3:-69445971	Msa0659140:CDS
GCTATTGGAAAGGCATCGAA+TGG	0.630188	4_3:-69445788	Msa0659140:CDS
ACTTGTTGACTTGAATGCGT+GGG	0.636422	4_3:-69445285	Msa0659140:three_prime_UTR
AAGCTGTAACTCCAGAACAG+TGG	0.652784	4_3:-69445711	Msa0659140:CDS
AAAAGCTTACAAGATGGGAA+GGG	0.654898	4_3:+69447350	None:intergenic
GTCCAACCAATCAAATCCCG+CGG	0.656421	4_3:-69445674	Msa0659140:CDS
AGTGCAACATAAAATTTGAG+TGG	0.662237	4_3:+69445562	None:intergenic
AAGTAACTGATATATCTGGA+GGG	0.667213	4_3:-69445970	Msa0659140:intron
TTACACGAGAAATTGAAGAA+CGG	0.691924	4_3:-69447439	Msa0659140:five_prime_UTR
AAAGTGCTTGACTTTCAGTG+GGG	0.752919	4_3:-69445522	Msa0659140:three_prime_UTR

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAAAACATAAGAAATTCAAA+AGG	+	chr4_3:69446779-69446798	None:intergenic	15.0%
!!	AAAAACATAAGAAATTCAAA+AGG	+	chr4_3:69446779-69446798	None:intergenic	15.0%
!!	CGAATATATATTTCACAAAA+GGG	-	chr4_3:69445323-69445342	Msa0659140:three_prime_UTR	20.0%
!!	GATATGCAAAAAAAAAAACA+TGG	+	chr4_3:69445533-69445552	None:intergenic	20.0%
!!!	TTTGAATTTTGGATACATTT+GGG	+	chr4_3:69445728-69445747	None:intergenic	20.0%
!!!	TTTTGAATTTTGGATACATT+TGG	+	chr4_3:69445729-69445748	None:intergenic	20.0%
!!	ATTGAATGTATCTATTAGTT+TGG	+	chr4_3:69445788-69445807	None:intergenic	20.0%
!!	TCAAAATAACTATACAAAAG+TGG	-	chr4_3:69446175-69446194	Msa0659140:intron	20.0%
!!	AAAAGTAAAAAGGAAGTAAA+GGG	+	chr4_3:69446271-69446290	None:intergenic	20.0%
!!!	CTTTATTTTCTTGTTTTTGT+GGG	-	chr4_3:69446433-69446452	Msa0659140:intron	20.0%
!!!	TTTATTTTCTTGTTTTTGTG+GGG	-	chr4_3:69446434-69446453	Msa0659140:intron	20.0%
!!	GCTAACATATATCTAAAAAA+AGG	+	chr4_3:69446517-69446536	None:intergenic	20.0%
!!	CTAATAAAAAATGTGTTAGA+TGG	+	chr4_3:69446855-69446874	None:intergenic	20.0%
!!	TTATAGATATTATATGCTCT+AGG	+	chr4_3:69447138-69447157	None:intergenic	20.0%
!!	CTTGGAAAGAATTAAAATTT+AGG	+	chr4_3:69447460-69447479	None:intergenic	20.0%
!!	CGAATATATATTTCACAAAA+GGG	-	chr4_3:69445323-69445342	Msa0659140:three_prime_UTR	20.0%
!!	GATATGCAAAAAAAAAAACA+TGG	+	chr4_3:69445533-69445552	None:intergenic	20.0%
!!!	TTTGAATTTTGGATACATTT+GGG	+	chr4_3:69445728-69445747	None:intergenic	20.0%
!!!	TTTTGAATTTTGGATACATT+TGG	+	chr4_3:69445729-69445748	None:intergenic	20.0%
!!	ATTGAATGTATCTATTAGTT+TGG	+	chr4_3:69445788-69445807	None:intergenic	20.0%
!!	TCAAAATAACTATACAAAAG+TGG	-	chr4_3:69446175-69446194	Msa0659140:intron	20.0%
!!	AAAAGTAAAAAGGAAGTAAA+GGG	+	chr4_3:69446271-69446290	None:intergenic	20.0%
!!!	CTTTATTTTCTTGTTTTTGT+GGG	-	chr4_3:69446433-69446452	Msa0659140:intron	20.0%
!!!	TTTATTTTCTTGTTTTTGTG+GGG	-	chr4_3:69446434-69446453	Msa0659140:intron	20.0%
!!	GCTAACATATATCTAAAAAA+AGG	+	chr4_3:69446517-69446536	None:intergenic	20.0%
!!	CTAATAAAAAATGTGTTAGA+TGG	+	chr4_3:69446855-69446874	None:intergenic	20.0%
!!	TTATAGATATTATATGCTCT+AGG	+	chr4_3:69447138-69447157	None:intergenic	20.0%
!!	CTTGGAAAGAATTAAAATTT+AGG	+	chr4_3:69447460-69447479	None:intergenic	20.0%
!	GCGAATATATATTTCACAAA+AGG	-	chr4_3:69445322-69445341	Msa0659140:three_prime_UTR	25.0%
!	TGCACAGTTCAAAATAATTA+GGG	+	chr4_3:69445615-69445634	None:intergenic	25.0%
!	TTGCACAGTTCAAAATAATT+AGG	+	chr4_3:69445616-69445635	None:intergenic	25.0%
!!!	TCGATGATGTTTTTGAATTT+TGG	+	chr4_3:69445739-69445758	None:intergenic	25.0%
!!!	TTGTAATTTTGATACAACCA+AGG	-	chr4_3:69445877-69445896	Msa0659140:intron	25.0%
!!!	TGTAATTTTGATACAACCAA+GGG	-	chr4_3:69445878-69445897	Msa0659140:intron	25.0%
!	TGCATGAATATTGAATACAA+CGG	+	chr4_3:69445920-69445939	None:intergenic	25.0%
!	TTGTATTCAATATTCATGCA+AGG	-	chr4_3:69445920-69445939	Msa0659140:intron	25.0%
!!!	ACCCTAATAGTTTTTATTTG+TGG	-	chr4_3:69445943-69445962	Msa0659140:intron	25.0%
!	GCCACAAATAAAAACTATTA+GGG	+	chr4_3:69445947-69445966	None:intergenic	25.0%
!	AGCCACAAATAAAAACTATT+AGG	+	chr4_3:69445948-69445967	None:intergenic	25.0%
!	TTAACATGATCAGAGTTTAA+TGG	-	chr4_3:69446076-69446095	Msa0659140:intron	25.0%
!	AAATAACTATACAAAAGTGG+TGG	-	chr4_3:69446178-69446197	Msa0659140:intron	25.0%
!	CAAAAGTAAAAAGGAAGTAA+AGG	+	chr4_3:69446272-69446291	None:intergenic	25.0%
!	TCGTCAAATCAAAAGTAAAA+AGG	+	chr4_3:69446281-69446300	None:intergenic	25.0%
!!!	GCTTTATTTTCTTGTTTTTG+TGG	-	chr4_3:69446432-69446451	Msa0659140:intron	25.0%
!!!	CAAGTTATGTTAGTTTTTCA+GGG	-	chr4_3:69446536-69446555	Msa0659140:intron	25.0%
!	TTCAAAAGGAAAAAAGAGAA+GGG	+	chr4_3:69446765-69446784	None:intergenic	25.0%
!	ATTCAAAAGGAAAAAAGAGA+AGG	+	chr4_3:69446766-69446785	None:intergenic	25.0%
!!!	GTTTTTTTTGTTTGTGTTTC+AGG	-	chr4_3:69446793-69446812	Msa0659140:intron	25.0%
!	ATTGTTTCAGAACAATTTGA+AGG	-	chr4_3:69446969-69446988	Msa0659140:intron	25.0%
!	GCGAATATATATTTCACAAA+AGG	-	chr4_3:69445322-69445341	Msa0659140:three_prime_UTR	25.0%
!	TGCACAGTTCAAAATAATTA+GGG	+	chr4_3:69445615-69445634	None:intergenic	25.0%
!	TTGCACAGTTCAAAATAATT+AGG	+	chr4_3:69445616-69445635	None:intergenic	25.0%
!!!	TCGATGATGTTTTTGAATTT+TGG	+	chr4_3:69445739-69445758	None:intergenic	25.0%
!!!	TTGTAATTTTGATACAACCA+AGG	-	chr4_3:69445877-69445896	Msa0659140:intron	25.0%
!!!	TGTAATTTTGATACAACCAA+GGG	-	chr4_3:69445878-69445897	Msa0659140:intron	25.0%
!	TGCATGAATATTGAATACAA+CGG	+	chr4_3:69445920-69445939	None:intergenic	25.0%
!	TTGTATTCAATATTCATGCA+AGG	-	chr4_3:69445920-69445939	Msa0659140:intron	25.0%
!!!	ACCCTAATAGTTTTTATTTG+TGG	-	chr4_3:69445943-69445962	Msa0659140:intron	25.0%
!	GCCACAAATAAAAACTATTA+GGG	+	chr4_3:69445947-69445966	None:intergenic	25.0%
!	AGCCACAAATAAAAACTATT+AGG	+	chr4_3:69445948-69445967	None:intergenic	25.0%
!	TTAACATGATCAGAGTTTAA+TGG	-	chr4_3:69446076-69446095	Msa0659140:intron	25.0%
!	AAATAACTATACAAAAGTGG+TGG	-	chr4_3:69446178-69446197	Msa0659140:intron	25.0%
!	CAAAAGTAAAAAGGAAGTAA+AGG	+	chr4_3:69446272-69446291	None:intergenic	25.0%
!	TCGTCAAATCAAAAGTAAAA+AGG	+	chr4_3:69446281-69446300	None:intergenic	25.0%
!!!	GCTTTATTTTCTTGTTTTTG+TGG	-	chr4_3:69446432-69446451	Msa0659140:intron	25.0%
!!!	CAAGTTATGTTAGTTTTTCA+GGG	-	chr4_3:69446536-69446555	Msa0659140:intron	25.0%
!	TTCAAAAGGAAAAAAGAGAA+GGG	+	chr4_3:69446765-69446784	None:intergenic	25.0%
!	ATTCAAAAGGAAAAAAGAGA+AGG	+	chr4_3:69446766-69446785	None:intergenic	25.0%
!!!	GTTTTTTTTGTTTGTGTTTC+AGG	-	chr4_3:69446793-69446812	Msa0659140:intron	25.0%
!	ATTGTTTCAGAACAATTTGA+AGG	-	chr4_3:69446969-69446988	Msa0659140:intron	25.0%
	TTACACGAGAAATTGAAGAA+CGG	-	chr4_3:69445347-69445366	Msa0659140:three_prime_UTR	30.0%
	GAAAGAAAAGCTTACAAGAT+GGG	+	chr4_3:69445444-69445463	None:intergenic	30.0%
	AACATGGTGTGTTGAAATTA+AGG	+	chr4_3:69445517-69445536	None:intergenic	30.0%
	ATCATAGTTGAGTATGCTAA+TGG	+	chr4_3:69445560-69445579	None:intergenic	30.0%
	CATACTCAACTATGATGTTT+AGG	-	chr4_3:69445564-69445583	Msa0659140:three_prime_UTR	30.0%
	AAAATAATTAGGGCTTAGGA+TGG	+	chr4_3:69445605-69445624	None:intergenic	30.0%
	GTTCAAAATAATTAGGGCTT+AGG	+	chr4_3:69445609-69445628	None:intergenic	30.0%
!	CTTACACAATTAGGGATTTT+TGG	+	chr4_3:69445688-69445707	None:intergenic	30.0%
	AAATCCCTAATTGTGTAAGA+CGG	-	chr4_3:69445689-69445708	Msa0659140:CDS	30.0%
!	AAAACATCATCGAGTTTGTT+CGG	-	chr4_3:69445746-69445765	Msa0659140:CDS	30.0%
	GCATGAATATTGAATACAAC+GGG	+	chr4_3:69445919-69445938	None:intergenic	30.0%
!!	AGTTTTTATTTGTGGCTATC+TGG	-	chr4_3:69445951-69445970	Msa0659140:intron	30.0%
	CACTAATTTAACAGTCTCTT+CGG	+	chr4_3:69446018-69446037	None:intergenic	30.0%
!	TTTGAAACTGATTGTGTGAT+GGG	+	chr4_3:69446160-69446179	None:intergenic	30.0%
!!!	TTTTGAAACTGATTGTGTGA+TGG	+	chr4_3:69446161-69446180	None:intergenic	30.0%
!!!	GCAAGTTATGTTAGTTTTTC+AGG	-	chr4_3:69446535-69446554	Msa0659140:intron	30.0%
	TTGGTGAGCTAAATAACATA+AGG	+	chr4_3:69446592-69446611	None:intergenic	30.0%
!!!	AAAGGTACACATTTTCAAGT+TGG	+	chr4_3:69446729-69446748	None:intergenic	30.0%
	AAGGGTCAAATACAAATGAA+AGG	+	chr4_3:69446747-69446766	None:intergenic	30.0%
	AAGTAACTGATATATCTGGA+GGG	-	chr4_3:69446816-69446835	Msa0659140:intron	30.0%
	ACAATCTTATGATTCCATGT+TGG	-	chr4_3:69446912-69446931	Msa0659140:intron	30.0%
	GATTCCATGTTGGTATTATT+AGG	-	chr4_3:69446922-69446941	Msa0659140:intron	30.0%
	CAGAACAATTTGAAGGAAAA+AGG	-	chr4_3:69446976-69446995	Msa0659140:intron	30.0%
	ATTTGAAGGAAAAAGGCTAT+TGG	-	chr4_3:69446983-69447002	Msa0659140:intron	30.0%
	AAATCCTTACAATATGTTGC+TGG	-	chr4_3:69447163-69447182	Msa0659140:intron	30.0%
	AGTGCAACATAAAATTTGAG+TGG	+	chr4_3:69447227-69447246	None:intergenic	30.0%
	AAACAATGCATGACTTATGA+AGG	-	chr4_3:69447388-69447407	Msa0659140:CDS	30.0%
!!	TCCTTTTCATTTTTCTTCTG+AGG	-	chr4_3:69447526-69447545	Msa0659140:five_prime_UTR	30.0%
!!	CCTTTTCATTTTTCTTCTGA+GGG	-	chr4_3:69447527-69447546	Msa0659140:five_prime_UTR	30.0%
	TTACACGAGAAATTGAAGAA+CGG	-	chr4_3:69445347-69445366	Msa0659140:three_prime_UTR	30.0%
	GAAAGAAAAGCTTACAAGAT+GGG	+	chr4_3:69445444-69445463	None:intergenic	30.0%
	AACATGGTGTGTTGAAATTA+AGG	+	chr4_3:69445517-69445536	None:intergenic	30.0%
	ATCATAGTTGAGTATGCTAA+TGG	+	chr4_3:69445560-69445579	None:intergenic	30.0%
	CATACTCAACTATGATGTTT+AGG	-	chr4_3:69445564-69445583	Msa0659140:three_prime_UTR	30.0%
	AAAATAATTAGGGCTTAGGA+TGG	+	chr4_3:69445605-69445624	None:intergenic	30.0%
	GTTCAAAATAATTAGGGCTT+AGG	+	chr4_3:69445609-69445628	None:intergenic	30.0%
!	CTTACACAATTAGGGATTTT+TGG	+	chr4_3:69445688-69445707	None:intergenic	30.0%
	AAATCCCTAATTGTGTAAGA+CGG	-	chr4_3:69445689-69445708	Msa0659140:CDS	30.0%
!	AAAACATCATCGAGTTTGTT+CGG	-	chr4_3:69445746-69445765	Msa0659140:CDS	30.0%
	GCATGAATATTGAATACAAC+GGG	+	chr4_3:69445919-69445938	None:intergenic	30.0%
!!	AGTTTTTATTTGTGGCTATC+TGG	-	chr4_3:69445951-69445970	Msa0659140:intron	30.0%
	CACTAATTTAACAGTCTCTT+CGG	+	chr4_3:69446018-69446037	None:intergenic	30.0%
!	TTTGAAACTGATTGTGTGAT+GGG	+	chr4_3:69446160-69446179	None:intergenic	30.0%
!!!	TTTTGAAACTGATTGTGTGA+TGG	+	chr4_3:69446161-69446180	None:intergenic	30.0%
!!!	GCAAGTTATGTTAGTTTTTC+AGG	-	chr4_3:69446535-69446554	Msa0659140:intron	30.0%
	TTGGTGAGCTAAATAACATA+AGG	+	chr4_3:69446592-69446611	None:intergenic	30.0%
!!!	AAAGGTACACATTTTCAAGT+TGG	+	chr4_3:69446729-69446748	None:intergenic	30.0%
	AAGGGTCAAATACAAATGAA+AGG	+	chr4_3:69446747-69446766	None:intergenic	30.0%
	AAGTAACTGATATATCTGGA+GGG	-	chr4_3:69446816-69446835	Msa0659140:intron	30.0%
	ACAATCTTATGATTCCATGT+TGG	-	chr4_3:69446912-69446931	Msa0659140:intron	30.0%
	GATTCCATGTTGGTATTATT+AGG	-	chr4_3:69446922-69446941	Msa0659140:intron	30.0%
	CAGAACAATTTGAAGGAAAA+AGG	-	chr4_3:69446976-69446995	Msa0659140:intron	30.0%
	ATTTGAAGGAAAAAGGCTAT+TGG	-	chr4_3:69446983-69447002	Msa0659140:intron	30.0%
	AAATCCTTACAATATGTTGC+TGG	-	chr4_3:69447163-69447182	Msa0659140:intron	30.0%
	AGTGCAACATAAAATTTGAG+TGG	+	chr4_3:69447227-69447246	None:intergenic	30.0%
	AAACAATGCATGACTTATGA+AGG	-	chr4_3:69447388-69447407	Msa0659140:CDS	30.0%
	AAAAGCTTACAAGATGGGAA+GGG	+	chr4_3:69445439-69445458	None:intergenic	35.0%
	GGAAAGAAAAGCTTACAAGA+TGG	+	chr4_3:69445445-69445464	None:intergenic	35.0%
	CAAAGGAAAGGAACGAAATT+GGG	+	chr4_3:69445466-69445485	None:intergenic	35.0%
	TCAAAGGAAAGGAACGAAAT+TGG	+	chr4_3:69445467-69445486	None:intergenic	35.0%
!	AAGAGCGTAAATCAAAGGAA+AGG	+	chr4_3:69445478-69445497	None:intergenic	35.0%
!	GTGAAAAGAGCGTAAATCAA+AGG	+	chr4_3:69445483-69445502	None:intergenic	35.0%
!	GCATATGTATTGACAGACAA+AGG	+	chr4_3:69445641-69445660	None:intergenic	35.0%
!	GTGTCTTAGGTTAGTTAGTT+TGG	+	chr4_3:69445813-69445832	None:intergenic	35.0%
	TAACTAACCTAAGACACTTG+AGG	-	chr4_3:69445816-69445835	Msa0659140:CDS	35.0%
	TTGAAACTGATTGTGTGATG+GGG	+	chr4_3:69446159-69446178	None:intergenic	35.0%
	ATTGGATGTCAGTGTAAAAC+TGG	-	chr4_3:69446226-69446245	Msa0659140:intron	35.0%
	ACGCTGCAAATGTGTAAATA+GGG	+	chr4_3:69446491-69446510	None:intergenic	35.0%
	TACGCTGCAAATGTGTAAAT+AGG	+	chr4_3:69446492-69446511	None:intergenic	35.0%
!!	ATAAGGAGTTTTCAAGCAAC+AGG	+	chr4_3:69446575-69446594	None:intergenic	35.0%
	TTGGCTACATCAAACTTCTA+AGG	-	chr4_3:69446625-69446644	Msa0659140:intron	35.0%
	TGGCTACATCAAACTTCTAA+GGG	-	chr4_3:69446626-69446645	Msa0659140:intron	35.0%
	CAGGAAGTAACTGATATATC+TGG	-	chr4_3:69446812-69446831	Msa0659140:intron	35.0%
	GAAGTAACTGATATATCTGG+AGG	-	chr4_3:69446815-69446834	Msa0659140:intron	35.0%
	TATAAGCGACAAGTATACTG+TGG	+	chr4_3:69446888-69446907	None:intergenic	35.0%
	CACACCTAATAATACCAACA+TGG	+	chr4_3:69446929-69446948	None:intergenic	35.0%
	CATGTTGGTATTATTAGGTG+TGG	-	chr4_3:69446927-69446946	Msa0659140:intron	35.0%
	AAGGAAAAAGGCTATTGGAA+AGG	-	chr4_3:69446988-69447007	Msa0659140:intron	35.0%
!	TGCTCTCTTTTGTACTTTCT+TGG	-	chr4_3:69447302-69447321	Msa0659140:intron	35.0%
!	GCTCTCTTTTGTACTTTCTT+GGG	-	chr4_3:69447303-69447322	Msa0659140:intron	35.0%
	GTATTGCTCAATAGAGATGA+AGG	-	chr4_3:69447325-69447344	Msa0659140:intron	35.0%
	TTCCAAGTTCATTCTTTACG+TGG	-	chr4_3:69447473-69447492	Msa0659140:five_prime_UTR	35.0%
	TTCCACGTAAAGAATGAACT+TGG	+	chr4_3:69447478-69447497	None:intergenic	35.0%
	AAAAGCTTACAAGATGGGAA+GGG	+	chr4_3:69445439-69445458	None:intergenic	35.0%
	GGAAAGAAAAGCTTACAAGA+TGG	+	chr4_3:69445445-69445464	None:intergenic	35.0%
	CAAAGGAAAGGAACGAAATT+GGG	+	chr4_3:69445466-69445485	None:intergenic	35.0%
	TCAAAGGAAAGGAACGAAAT+TGG	+	chr4_3:69445467-69445486	None:intergenic	35.0%
!	AAGAGCGTAAATCAAAGGAA+AGG	+	chr4_3:69445478-69445497	None:intergenic	35.0%
!	GTGAAAAGAGCGTAAATCAA+AGG	+	chr4_3:69445483-69445502	None:intergenic	35.0%
!	GCATATGTATTGACAGACAA+AGG	+	chr4_3:69445641-69445660	None:intergenic	35.0%
!	GTGTCTTAGGTTAGTTAGTT+TGG	+	chr4_3:69445813-69445832	None:intergenic	35.0%
	TAACTAACCTAAGACACTTG+AGG	-	chr4_3:69445816-69445835	Msa0659140:CDS	35.0%
	TTGAAACTGATTGTGTGATG+GGG	+	chr4_3:69446159-69446178	None:intergenic	35.0%
	ATTGGATGTCAGTGTAAAAC+TGG	-	chr4_3:69446226-69446245	Msa0659140:intron	35.0%
	ACGCTGCAAATGTGTAAATA+GGG	+	chr4_3:69446491-69446510	None:intergenic	35.0%
	TACGCTGCAAATGTGTAAAT+AGG	+	chr4_3:69446492-69446511	None:intergenic	35.0%
!!	ATAAGGAGTTTTCAAGCAAC+AGG	+	chr4_3:69446575-69446594	None:intergenic	35.0%
	TTGGCTACATCAAACTTCTA+AGG	-	chr4_3:69446625-69446644	Msa0659140:intron	35.0%
	TGGCTACATCAAACTTCTAA+GGG	-	chr4_3:69446626-69446645	Msa0659140:intron	35.0%
	CAGGAAGTAACTGATATATC+TGG	-	chr4_3:69446812-69446831	Msa0659140:intron	35.0%
	GAAGTAACTGATATATCTGG+AGG	-	chr4_3:69446815-69446834	Msa0659140:intron	35.0%
	TATAAGCGACAAGTATACTG+TGG	+	chr4_3:69446888-69446907	None:intergenic	35.0%
	CACACCTAATAATACCAACA+TGG	+	chr4_3:69446929-69446948	None:intergenic	35.0%
	CATGTTGGTATTATTAGGTG+TGG	-	chr4_3:69446927-69446946	Msa0659140:intron	35.0%
	AAGGAAAAAGGCTATTGGAA+AGG	-	chr4_3:69446988-69447007	Msa0659140:intron	35.0%
!	TGCTCTCTTTTGTACTTTCT+TGG	-	chr4_3:69447302-69447321	Msa0659140:intron	35.0%
!	GCTCTCTTTTGTACTTTCTT+GGG	-	chr4_3:69447303-69447322	Msa0659140:intron	35.0%
	GTATTGCTCAATAGAGATGA+AGG	-	chr4_3:69447325-69447344	Msa0659140:intron	35.0%
	TTCCAAGTTCATTCTTTACG+TGG	-	chr4_3:69447473-69447492	Msa0659140:five_prime_UTR	35.0%
	TTCCACGTAAAGAATGAACT+TGG	+	chr4_3:69447478-69447497	None:intergenic	35.0%
	GAAATTGAAGAACGGCAGAA+AGG	-	chr4_3:69445355-69445374	Msa0659140:three_prime_UTR	40.0%
	GAAAAGCTTACAAGATGGGA+AGG	+	chr4_3:69445440-69445459	None:intergenic	40.0%
	TTTGGATCTCCAATGCTAAG+TGG	+	chr4_3:69445670-69445689	None:intergenic	40.0%
	GACACCGTCTTACACAATTA+GGG	+	chr4_3:69445696-69445715	None:intergenic	40.0%
	TGACACCGTCTTACACAATT+AGG	+	chr4_3:69445697-69445716	None:intergenic	40.0%
	ATTCAGTCCTCAAGTGTCTT+AGG	+	chr4_3:69445826-69445845	None:intergenic	40.0%
!	GACTAGCGAAAGACACTTTT+AGG	-	chr4_3:69445847-69445866	Msa0659140:intron	40.0%
!	GATTGTGTGATGGGGAAAAA+TGG	+	chr4_3:69446151-69446170	None:intergenic	40.0%
!	ATACAAAAGTGGTGGTGACA+TGG	-	chr4_3:69446186-69446205	Msa0659140:intron	40.0%
	GCAACGTAGTGAATTCACAT+TGG	-	chr4_3:69446208-69446227	Msa0659140:intron	40.0%
	ATGTAGCCAAGTAGATGGTT+CGG	+	chr4_3:69446615-69446634	None:intergenic	40.0%
	GTTTGATGTAGCCAAGTAGA+TGG	+	chr4_3:69446620-69446639	None:intergenic	40.0%
	CGCATAACTCTTGTGAACTT+AGG	+	chr4_3:69446686-69446705	None:intergenic	40.0%
!!!	TGCTGTTTTTTCCACTGTTC+TGG	+	chr4_3:69447089-69447108	None:intergenic	40.0%
!	ATATTATATGCTCTAGGCCG+CGG	+	chr4_3:69447132-69447151	None:intergenic	40.0%
	ACTGCCAGCAACATATTGTA+AGG	+	chr4_3:69447170-69447189	None:intergenic	40.0%
	TATGTTGCTGGCAGTATTTG+TGG	-	chr4_3:69447175-69447194	Msa0659140:intron	40.0%
!	ACAAAGTGCTTGACTTTCAG+TGG	-	chr4_3:69447262-69447281	Msa0659140:intron	40.0%
!	CAAAGTGCTTGACTTTCAGT+GGG	-	chr4_3:69447263-69447282	Msa0659140:intron	40.0%
!	AAAGTGCTTGACTTTCAGTG+GGG	-	chr4_3:69447264-69447283	Msa0659140:intron	40.0%
!!	AACTTGTTGACTTGAATGCG+TGG	-	chr4_3:69447500-69447519	Msa0659140:five_prime_UTR	40.0%
!!	ACTTGTTGACTTGAATGCGT+GGG	-	chr4_3:69447501-69447520	Msa0659140:five_prime_UTR	40.0%
	GAAATTGAAGAACGGCAGAA+AGG	-	chr4_3:69445355-69445374	Msa0659140:three_prime_UTR	40.0%
	GAAAAGCTTACAAGATGGGA+AGG	+	chr4_3:69445440-69445459	None:intergenic	40.0%
	TTTGGATCTCCAATGCTAAG+TGG	+	chr4_3:69445670-69445689	None:intergenic	40.0%
	GACACCGTCTTACACAATTA+GGG	+	chr4_3:69445696-69445715	None:intergenic	40.0%
	TGACACCGTCTTACACAATT+AGG	+	chr4_3:69445697-69445716	None:intergenic	40.0%
	ATTCAGTCCTCAAGTGTCTT+AGG	+	chr4_3:69445826-69445845	None:intergenic	40.0%
!	GACTAGCGAAAGACACTTTT+AGG	-	chr4_3:69445847-69445866	Msa0659140:intron	40.0%
!	GATTGTGTGATGGGGAAAAA+TGG	+	chr4_3:69446151-69446170	None:intergenic	40.0%
!	ATACAAAAGTGGTGGTGACA+TGG	-	chr4_3:69446186-69446205	Msa0659140:intron	40.0%
	GCAACGTAGTGAATTCACAT+TGG	-	chr4_3:69446208-69446227	Msa0659140:intron	40.0%
	ATGTAGCCAAGTAGATGGTT+CGG	+	chr4_3:69446615-69446634	None:intergenic	40.0%
	GTTTGATGTAGCCAAGTAGA+TGG	+	chr4_3:69446620-69446639	None:intergenic	40.0%
	CGCATAACTCTTGTGAACTT+AGG	+	chr4_3:69446686-69446705	None:intergenic	40.0%
!!!	TGCTGTTTTTTCCACTGTTC+TGG	+	chr4_3:69447089-69447108	None:intergenic	40.0%
!	ATATTATATGCTCTAGGCCG+CGG	+	chr4_3:69447132-69447151	None:intergenic	40.0%
	ACTGCCAGCAACATATTGTA+AGG	+	chr4_3:69447170-69447189	None:intergenic	40.0%
	TATGTTGCTGGCAGTATTTG+TGG	-	chr4_3:69447175-69447194	Msa0659140:intron	40.0%
!	ACAAAGTGCTTGACTTTCAG+TGG	-	chr4_3:69447262-69447281	Msa0659140:intron	40.0%
!	CAAAGTGCTTGACTTTCAGT+GGG	-	chr4_3:69447263-69447282	Msa0659140:intron	40.0%
!	AAAGTGCTTGACTTTCAGTG+GGG	-	chr4_3:69447264-69447283	Msa0659140:intron	40.0%
!!	AACTTGTTGACTTGAATGCG+TGG	-	chr4_3:69447500-69447519	Msa0659140:five_prime_UTR	40.0%
!!	ACTTGTTGACTTGAATGCGT+GGG	-	chr4_3:69447501-69447520	Msa0659140:five_prime_UTR	40.0%
	GGCAGAAAGGTCAGAGAAAT+GGG	-	chr4_3:69445368-69445387	Msa0659140:three_prime_UTR	45.0%
	CAGAGAAATGGGTGTGACAA+AGG	-	chr4_3:69445379-69445398	Msa0659140:three_prime_UTR	45.0%
!	TGCTTCATGCCACTTAGCAT+TGG	-	chr4_3:69445658-69445677	Msa0659140:exon	45.0%
!	GACTCGTGAAGTTTTCACAC+TGG	-	chr4_3:69446040-69446059	Msa0659140:intron	45.0%
	AGAGTTTAATGGCTGTGCAC+TGG	-	chr4_3:69446087-69446106	Msa0659140:intron	45.0%
	GGGTAGAACGCACATTACAA+AGG	-	chr4_3:69446454-69446473	Msa0659140:intron	45.0%
!!	GAGTTTTCAAGCAACAGGTC+TGG	+	chr4_3:69446570-69446589	None:intergenic	45.0%
!!	GCTATTGGAAAGGCATCGAA+TGG	-	chr4_3:69446998-69447017	Msa0659140:intron	45.0%
	CTCTTTCATTTCCTCCTCCA+AGG	+	chr4_3:69447033-69447052	None:intergenic	45.0%
	AAGCTGTAACTCCAGAACAG+TGG	-	chr4_3:69447075-69447094	Msa0659140:intron	45.0%
!	TATTATATGCTCTAGGCCGC+GGG	+	chr4_3:69447131-69447150	None:intergenic	45.0%
	GGCAGAAAGGTCAGAGAAAT+GGG	-	chr4_3:69445368-69445387	Msa0659140:three_prime_UTR	45.0%
	CAGAGAAATGGGTGTGACAA+AGG	-	chr4_3:69445379-69445398	Msa0659140:three_prime_UTR	45.0%
!	TGCTTCATGCCACTTAGCAT+TGG	-	chr4_3:69445658-69445677	Msa0659140:exon	45.0%
!	GACTCGTGAAGTTTTCACAC+TGG	-	chr4_3:69446040-69446059	Msa0659140:intron	45.0%
	AGAGTTTAATGGCTGTGCAC+TGG	-	chr4_3:69446087-69446106	Msa0659140:intron	45.0%
	GGGTAGAACGCACATTACAA+AGG	-	chr4_3:69446454-69446473	Msa0659140:intron	45.0%
!!	GAGTTTTCAAGCAACAGGTC+TGG	+	chr4_3:69446570-69446589	None:intergenic	45.0%
!!	GCTATTGGAAAGGCATCGAA+TGG	-	chr4_3:69446998-69447017	Msa0659140:intron	45.0%
	CTCTTTCATTTCCTCCTCCA+AGG	+	chr4_3:69447033-69447052	None:intergenic	45.0%
	AAGCTGTAACTCCAGAACAG+TGG	-	chr4_3:69447075-69447094	Msa0659140:intron	45.0%
!	TATTATATGCTCTAGGCCGC+GGG	+	chr4_3:69447131-69447150	None:intergenic	45.0%
	CGGCAGAAAGGTCAGAGAAA+TGG	-	chr4_3:69445367-69445386	Msa0659140:three_prime_UTR	50.0%
	AAGATGGGAAGGGTTGAGTC+TGG	+	chr4_3:69445429-69445448	None:intergenic	50.0%
	GCAGTGTCAATGTAGTCCCT+TGG	+	chr4_3:69445897-69445916	None:intergenic	50.0%
	CACCAACCGAACCATCTACT+TGG	-	chr4_3:69446606-69446625	Msa0659140:intron	50.0%
!!	AGCCAAGTAGATGGTTCGGT+TGG	+	chr4_3:69446611-69446630	None:intergenic	50.0%
	TCGAATGGTGAATGCTGCCT+TGG	-	chr4_3:69447013-69447032	Msa0659140:intron	50.0%
	AATGGTGAATGCTGCCTTGG+AGG	-	chr4_3:69447016-69447035	Msa0659140:intron	50.0%
	GTCCAACCAATCAAATCCCG+CGG	-	chr4_3:69447112-69447131	Msa0659140:intron	50.0%
	CGGCAGAAAGGTCAGAGAAA+TGG	-	chr4_3:69445367-69445386	Msa0659140:three_prime_UTR	50.0%
	AAGATGGGAAGGGTTGAGTC+TGG	+	chr4_3:69445429-69445448	None:intergenic	50.0%
	GCAGTGTCAATGTAGTCCCT+TGG	+	chr4_3:69445897-69445916	None:intergenic	50.0%
	CACCAACCGAACCATCTACT+TGG	-	chr4_3:69446606-69446625	Msa0659140:intron	50.0%
!!	AGCCAAGTAGATGGTTCGGT+TGG	+	chr4_3:69446611-69446630	None:intergenic	50.0%
	TCGAATGGTGAATGCTGCCT+TGG	-	chr4_3:69447013-69447032	Msa0659140:intron	50.0%
	AATGGTGAATGCTGCCTTGG+AGG	-	chr4_3:69447016-69447035	Msa0659140:intron	50.0%
	GTCCAACCAATCAAATCCCG+CGG	-	chr4_3:69447112-69447131	Msa0659140:intron	50.0%
	ATCGATCCGCGTGTGAGCAA+CGG	-	chr4_3:69445288-69445307	Msa0659140:three_prime_UTR	55.0%
	AACTTGCCGTTGCTCACACG+CGG	+	chr4_3:69445297-69445316	None:intergenic	55.0%
	TCTAGGCCGCGGGATTTGAT+TGG	+	chr4_3:69447121-69447140	None:intergenic	55.0%
	ATCGATCCGCGTGTGAGCAA+CGG	-	chr4_3:69445288-69445307	Msa0659140:three_prime_UTR	55.0%
	AACTTGCCGTTGCTCACACG+CGG	+	chr4_3:69445297-69445316	None:intergenic	55.0%
	TCTAGGCCGCGGGATTTGAT+TGG	+	chr4_3:69447121-69447140	None:intergenic	55.0%
	GGTGAATGCTGCCTTGGAGG+AGG	-	chr4_3:69447019-69447038	Msa0659140:intron	60.0%
	GGCCGCGGGATTTGATTGGT+TGG	+	chr4_3:69447117-69447136	None:intergenic	60.0%
	GGTGAATGCTGCCTTGGAGG+AGG	-	chr4_3:69447019-69447038	Msa0659140:intron	60.0%
	GGCCGCGGGATTTGATTGGT+TGG	+	chr4_3:69447117-69447136	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr4_3	gene	69445261	69447547	69445261	ID=Msa0659140;Name=Msa0659140
chr4_3	mRNA	69445261	69447547	69445261	ID=Msa0659140-mRNA-1;Parent=Msa0659140;Name=Msa0659140-mRNA-1;_AED=0.08;_eAED=0.08;_QI=125\|1\|1\|1\|1\|1\|3\|408\|93
chr4_3	exon	69445261	69445864	69445261	ID=Msa0659140-mRNA-1:exon:20365;Parent=Msa0659140-mRNA-1
chr4_3	exon	69445971	69445993	69445971	ID=Msa0659140-mRNA-1:exon:20364;Parent=Msa0659140-mRNA-1
chr4_3	exon	69447360	69447547	69447360	ID=Msa0659140-mRNA-1:exon:20363;Parent=Msa0659140-mRNA-1
chr4_3	five_prime_UTR	69447423	69447547	69447423	ID=Msa0659140-mRNA-1:five_prime_utr;Parent=Msa0659140-mRNA-1
chr4_3	CDS	69447360	69447422	69447360	ID=Msa0659140-mRNA-1:cds;Parent=Msa0659140-mRNA-1
chr4_3	CDS	69445971	69445993	69445971	ID=Msa0659140-mRNA-1:cds;Parent=Msa0659140-mRNA-1
chr4_3	CDS	69445669	69445864	69445669	ID=Msa0659140-mRNA-1:cds;Parent=Msa0659140-mRNA-1
chr4_3	three_prime_UTR	69445261	69445668	69445261	ID=Msa0659140-mRNA-1:three_prime_utr;Parent=Msa0659140-mRNA-1

Gene Sequence	>Msa0659140 ATGGGTGTGACAAAGGAACAAGTCGAATCATCTTTGAACTCCAGACTCAACCCTTCCCATCTTGAAGTAACTGATATATCTGGAGGGTGTGGTTCAAGTTTTGCAGTTGAGATTGTTTCAGAACAATTTGAAGGAAAAAGGCTATTGGAAAGGCATCGAATGGTGAATGCTGCCTTGGAGGAGGAAATGAAAGAGATTCATGCACTCTCTGTAAAGAAAGCTGTAACTCCAGAACAGTGGAAAAAACAGCAAGAGTCCAACCAATCAAATCCCGCGGCCTAG
Protein sequence	>Msa0659140 MGVTKEQVESSLNSRLNPSHLEVTDISGGCGSSFAVEIVSEQFEGKRLLERHRMVNAALEEEMKEIHALSVKKAVTPEQWKKQQESNQSNPAA*