Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07708.t1 | XP_003606244.1 | 94.6 | 465 | 24 | 1 | 1 | 464 | 1 | 465 | 1.40E-255 | 891.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07708.t1 | Q8GYW8 | 43.0 | 460 | 250 | 7 | 1 | 455 | 1 | 453 | 6.8e-97 | 355.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07708.t1 | G7JKY1 | 94.6 | 465 | 24 | 1 | 1 | 464 | 1 | 465 | 1.0e-255 | 891.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07708.t1 | MTR_4g055170 | 94.624 | 465 | 24 | 1 | 1 | 464 | 1 | 465 | 0.0 | 900 |
MS.gene07708.t1 | MTR_3g465980 | 50.427 | 468 | 205 | 11 | 6 | 457 | 4 | 460 | 1.56e-153 | 444 |
MS.gene07708.t1 | MTR_3g465880 | 52.688 | 465 | 198 | 12 | 10 | 457 | 8 | 467 | 2.56e-153 | 444 |
MS.gene07708.t1 | MTR_3g465990 | 50.214 | 468 | 206 | 13 | 6 | 457 | 4 | 460 | 5.02e-152 | 440 |
MS.gene07708.t1 | MTR_3g465930 | 49.785 | 466 | 207 | 12 | 10 | 457 | 8 | 464 | 4.94e-147 | 428 |
MS.gene07708.t1 | MTR_3g465910 | 50.649 | 462 | 200 | 13 | 10 | 454 | 8 | 458 | 5.40e-146 | 427 |
MS.gene07708.t1 | MTR_6g053810 | 46.895 | 467 | 227 | 11 | 5 | 456 | 4 | 464 | 8.05e-134 | 394 |
MS.gene07708.t1 | MTR_3g465950 | 48.993 | 447 | 199 | 12 | 10 | 442 | 8 | 439 | 3.84e-130 | 384 |
MS.gene07708.t1 | MTR_3g465870 | 44.563 | 469 | 204 | 11 | 1 | 457 | 1 | 425 | 1.47e-116 | 348 |
MS.gene07708.t1 | MTR_2g015430 | 32.604 | 457 | 273 | 15 | 12 | 454 | 2 | 437 | 4.59e-71 | 232 |
MS.gene07708.t1 | MTR_3g098980 | 32.110 | 436 | 267 | 13 | 18 | 449 | 20 | 430 | 1.97e-58 | 199 |
MS.gene07708.t1 | MTR_7g027175 | 31.729 | 457 | 279 | 15 | 2 | 452 | 7 | 436 | 2.16e-57 | 196 |
MS.gene07708.t1 | MTR_8g096530 | 31.140 | 456 | 286 | 12 | 10 | 461 | 5 | 436 | 2.14e-56 | 193 |
MS.gene07708.t1 | MTR_1g081660 | 29.565 | 460 | 295 | 12 | 1 | 452 | 7 | 445 | 5.48e-56 | 192 |
MS.gene07708.t1 | MTR_1g040215 | 29.018 | 448 | 296 | 10 | 19 | 462 | 16 | 445 | 1.61e-52 | 184 |
MS.gene07708.t1 | MTR_1g053315 | 30.425 | 447 | 281 | 17 | 20 | 451 | 26 | 457 | 2.04e-52 | 183 |
MS.gene07708.t1 | MTR_5g076700 | 28.477 | 453 | 294 | 12 | 19 | 463 | 17 | 447 | 7.78e-52 | 182 |
MS.gene07708.t1 | MTR_7g110610 | 31.514 | 403 | 207 | 12 | 7 | 406 | 2 | 338 | 4.54e-51 | 178 |
MS.gene07708.t1 | MTR_1g040175 | 30.326 | 399 | 259 | 9 | 7 | 401 | 4 | 387 | 6.44e-51 | 179 |
MS.gene07708.t1 | MTR_3g071320 | 30.110 | 455 | 283 | 16 | 11 | 455 | 4 | 433 | 3.46e-50 | 177 |
MS.gene07708.t1 | MTR_7g114550 | 29.771 | 393 | 246 | 11 | 19 | 401 | 17 | 389 | 9.61e-48 | 171 |
MS.gene07708.t1 | MTR_7g114560 | 29.517 | 393 | 247 | 12 | 19 | 401 | 17 | 389 | 2.17e-47 | 170 |
MS.gene07708.t1 | MTR_7g114520 | 29.306 | 447 | 280 | 13 | 19 | 452 | 18 | 441 | 2.76e-47 | 169 |
MS.gene07708.t1 | MTR_1g040195 | 27.009 | 448 | 288 | 8 | 6 | 452 | 3 | 412 | 2.45e-46 | 166 |
MS.gene07708.t1 | MTR_3g112180 | 27.564 | 468 | 280 | 15 | 15 | 462 | 15 | 443 | 1.70e-45 | 164 |
MS.gene07708.t1 | MTR_7g114470 | 27.540 | 443 | 293 | 12 | 19 | 452 | 18 | 441 | 2.34e-45 | 164 |
MS.gene07708.t1 | MTR_7g114490 | 29.517 | 393 | 247 | 11 | 19 | 401 | 17 | 389 | 5.52e-45 | 164 |
MS.gene07708.t1 | MTR_1g040320 | 29.399 | 449 | 265 | 11 | 6 | 452 | 3 | 401 | 1.59e-43 | 159 |
MS.gene07708.t1 | MTR_8g075610 | 28.889 | 450 | 266 | 17 | 19 | 449 | 1 | 415 | 1.52e-41 | 153 |
MS.gene07708.t1 | MTR_2g105330 | 26.889 | 450 | 292 | 16 | 12 | 449 | 3 | 427 | 1.21e-40 | 151 |
MS.gene07708.t1 | MTR_2g064495 | 26.444 | 450 | 294 | 15 | 12 | 449 | 3 | 427 | 2.68e-40 | 150 |
MS.gene07708.t1 | MTR_4g007540 | 28.070 | 456 | 280 | 18 | 12 | 449 | 3 | 428 | 4.81e-40 | 149 |
MS.gene07708.t1 | MTR_1g040315 | 26.846 | 447 | 261 | 11 | 20 | 461 | 17 | 402 | 6.34e-39 | 146 |
MS.gene07708.t1 | MTR_4g097090 | 28.979 | 421 | 257 | 13 | 7 | 401 | 4 | 408 | 1.03e-34 | 135 |
MS.gene07708.t1 | MTR_7g084940 | 27.093 | 454 | 290 | 17 | 8 | 448 | 12 | 437 | 3.06e-34 | 133 |
MS.gene07708.t1 | MTR_3g049150 | 29.630 | 405 | 240 | 16 | 20 | 397 | 10 | 396 | 9.90e-34 | 132 |
MS.gene07708.t1 | MTR_4g127650 | 29.014 | 355 | 238 | 8 | 15 | 363 | 13 | 359 | 2.48e-32 | 128 |
MS.gene07708.t1 | MTR_7g085930 | 31.008 | 387 | 207 | 19 | 10 | 363 | 6 | 365 | 3.48e-32 | 128 |
MS.gene07708.t1 | MTR_7g085990 | 30.670 | 388 | 207 | 20 | 10 | 363 | 2 | 361 | 5.78e-31 | 124 |
MS.gene07708.t1 | MTR_7g056087 | 26.503 | 449 | 284 | 15 | 18 | 447 | 10 | 431 | 1.90e-30 | 122 |
MS.gene07708.t1 | MTR_3g026950 | 28.193 | 415 | 245 | 19 | 20 | 401 | 10 | 404 | 1.14e-29 | 120 |
MS.gene07708.t1 | MTR_4g013050 | 26.770 | 452 | 248 | 16 | 20 | 448 | 12 | 403 | 1.70e-28 | 117 |
MS.gene07708.t1 | MTR_7g086000 | 26.777 | 422 | 253 | 15 | 20 | 405 | 12 | 413 | 2.99e-26 | 111 |
MS.gene07708.t1 | MTR_3g070170 | 26.503 | 449 | 276 | 16 | 41 | 454 | 37 | 466 | 1.81e-25 | 108 |
MS.gene07708.t1 | MTR_0502s0010 | 29.084 | 251 | 154 | 6 | 106 | 346 | 2 | 238 | 1.05e-24 | 102 |
MS.gene07708.t1 | MTR_7g084910 | 26.531 | 441 | 257 | 17 | 19 | 440 | 24 | 416 | 3.17e-24 | 105 |
MS.gene07708.t1 | MTR_8g079970 | 26.974 | 456 | 275 | 18 | 20 | 455 | 11 | 428 | 2.16e-23 | 102 |
MS.gene07708.t1 | MTR_3g086020 | 25.821 | 457 | 261 | 20 | 19 | 454 | 12 | 411 | 4.58e-23 | 101 |
MS.gene07708.t1 | MTR_2g007880 | 26.151 | 478 | 276 | 19 | 10 | 455 | 15 | 447 | 3.86e-22 | 99.0 |
MS.gene07708.t1 | MTR_4g094835 | 28.467 | 274 | 177 | 8 | 69 | 332 | 64 | 328 | 3.94e-21 | 95.9 |
MS.gene07708.t1 | MTR_7g114500 | 36.641 | 131 | 81 | 1 | 19 | 149 | 17 | 145 | 1.25e-20 | 88.6 |
MS.gene07708.t1 | MTR_5g084870 | 25.918 | 463 | 279 | 18 | 20 | 462 | 11 | 429 | 1.67e-20 | 94.0 |
MS.gene07708.t1 | MTR_3g102020 | 27.500 | 280 | 177 | 9 | 69 | 335 | 69 | 335 | 9.50e-20 | 92.0 |
MS.gene07708.t1 | MTR_3g101900 | 27.500 | 280 | 177 | 8 | 69 | 335 | 66 | 332 | 9.59e-20 | 91.7 |
MS.gene07708.t1 | MTR_3g101960 | 26.786 | 280 | 179 | 8 | 69 | 335 | 68 | 334 | 1.18e-19 | 91.7 |
MS.gene07708.t1 | MTR_0042s0190 | 27.350 | 234 | 158 | 6 | 169 | 401 | 1 | 223 | 1.30e-19 | 89.4 |
MS.gene07708.t1 | MTR_4g094842 | 28.767 | 292 | 173 | 11 | 59 | 330 | 52 | 328 | 1.92e-19 | 90.9 |
MS.gene07708.t1 | MTR_3g101930 | 30.034 | 293 | 171 | 11 | 59 | 330 | 56 | 335 | 9.32e-19 | 89.0 |
MS.gene07708.t1 | MTR_7g114510 | 25.237 | 317 | 197 | 12 | 151 | 452 | 8 | 299 | 1.39e-18 | 86.7 |
MS.gene07708.t1 | MTR_5g090810 | 23.778 | 450 | 303 | 16 | 19 | 444 | 17 | 450 | 1.48e-18 | 88.2 |
MS.gene07708.t1 | MTR_0042s0230 | 34.028 | 144 | 93 | 1 | 6 | 149 | 3 | 144 | 1.52e-18 | 82.8 |
MS.gene07708.t1 | MTR_3g450710 | 25.946 | 370 | 214 | 14 | 69 | 401 | 65 | 411 | 1.70e-18 | 88.2 |
MS.gene07708.t1 | MTR_4g094832 | 27.937 | 315 | 204 | 10 | 97 | 403 | 83 | 382 | 1.74e-18 | 87.8 |
MS.gene07708.t1 | MTR_4g022720 | 29.642 | 307 | 179 | 13 | 69 | 354 | 55 | 345 | 3.36e-18 | 87.0 |
MS.gene07708.t1 | MTR_5g084850 | 25.482 | 467 | 275 | 19 | 20 | 462 | 11 | 428 | 4.66e-18 | 86.7 |
MS.gene07708.t1 | MTR_5g090830 | 23.620 | 453 | 300 | 18 | 19 | 444 | 17 | 450 | 1.25e-17 | 85.5 |
MS.gene07708.t1 | MTR_4g022825 | 28.896 | 308 | 185 | 11 | 69 | 354 | 55 | 350 | 1.30e-17 | 85.1 |
MS.gene07708.t1 | MTR_5g090880 | 24.227 | 388 | 240 | 12 | 49 | 401 | 46 | 414 | 1.61e-17 | 85.1 |
MS.gene07708.t1 | MTR_4g022760 | 28.875 | 329 | 202 | 13 | 69 | 373 | 55 | 375 | 1.67e-17 | 84.7 |
MS.gene07708.t1 | MTR_4g022800 | 28.525 | 305 | 191 | 10 | 69 | 354 | 55 | 351 | 2.78e-17 | 84.3 |
MS.gene07708.t1 | MTR_3g102010 | 26.056 | 284 | 180 | 8 | 69 | 335 | 65 | 335 | 3.36e-17 | 84.0 |
MS.gene07708.t1 | MTR_4g094838 | 24.789 | 355 | 213 | 9 | 69 | 403 | 64 | 384 | 3.37e-17 | 84.0 |
MS.gene07708.t1 | MTR_3g450690 | 25.068 | 367 | 218 | 13 | 69 | 401 | 72 | 415 | 9.46e-17 | 82.8 |
MS.gene07708.t1 | MTR_7g114960 | 23.797 | 374 | 241 | 15 | 10 | 367 | 8 | 353 | 1.08e-16 | 82.4 |
MS.gene07708.t1 | MTR_3g088420 | 25.490 | 306 | 193 | 10 | 69 | 355 | 55 | 344 | 2.13e-16 | 81.6 |
MS.gene07708.t1 | MTR_3g051790 | 38.211 | 123 | 66 | 4 | 19 | 137 | 20 | 136 | 2.15e-16 | 77.4 |
MS.gene07708.t1 | MTR_8g041770 | 26.101 | 318 | 208 | 9 | 49 | 354 | 48 | 350 | 2.61e-16 | 81.3 |
MS.gene07708.t1 | MTR_3g026310 | 27.414 | 321 | 180 | 11 | 69 | 357 | 55 | 354 | 5.43e-16 | 80.5 |
MS.gene07708.t1 | MTR_8g039950 | 39.604 | 101 | 55 | 2 | 20 | 118 | 17 | 113 | 6.46e-16 | 74.7 |
MS.gene07708.t1 | MTR_4g022670 | 28.197 | 305 | 192 | 11 | 69 | 354 | 55 | 351 | 6.97e-16 | 80.1 |
MS.gene07708.t1 | MTR_8g079980 | 24.891 | 458 | 281 | 19 | 20 | 455 | 11 | 427 | 1.42e-15 | 79.0 |
MS.gene07708.t1 | MTR_4g094828 | 24.716 | 352 | 239 | 12 | 69 | 403 | 59 | 401 | 1.63e-15 | 79.0 |
MS.gene07708.t1 | MTR_0190s0020 | 26.882 | 279 | 184 | 8 | 61 | 330 | 55 | 322 | 5.40e-15 | 77.4 |
MS.gene07708.t1 | MTR_4g022290 | 24.727 | 275 | 188 | 7 | 69 | 332 | 60 | 326 | 1.24e-13 | 73.2 |
MS.gene07708.t1 | MTR_3g049140 | 29.609 | 179 | 107 | 7 | 232 | 397 | 21 | 193 | 1.57e-13 | 70.9 |
MS.gene07708.t1 | MTR_8g079950 | 24.459 | 462 | 279 | 19 | 20 | 455 | 11 | 428 | 1.72e-13 | 72.8 |
MS.gene07708.t1 | MTR_5g026320 | 23.514 | 387 | 259 | 15 | 25 | 397 | 33 | 396 | 2.73e-13 | 72.0 |
MS.gene07708.t1 | MTR_7g026860 | 26.885 | 305 | 196 | 10 | 69 | 354 | 55 | 351 | 1.45e-12 | 69.7 |
MS.gene07708.t1 | MTR_8g040780 | 31.061 | 132 | 77 | 3 | 228 | 354 | 16 | 138 | 2.87e-12 | 67.0 |
MS.gene07708.t1 | MTR_1g011660 | 23.003 | 313 | 223 | 10 | 19 | 325 | 13 | 313 | 1.59e-11 | 66.6 |
MS.gene07708.t1 | MTR_7g014200 | 23.404 | 423 | 278 | 16 | 58 | 447 | 51 | 460 | 7.77e-11 | 64.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07708.t1 | AT5G07080 | 46.507 | 458 | 205 | 13 | 10 | 451 | 12 | 445 | 1.03e-127 | 378 |
MS.gene07708.t1 | AT2G25150 | 43.043 | 460 | 250 | 7 | 1 | 455 | 1 | 453 | 1.49e-118 | 355 |
MS.gene07708.t1 | AT2G23510 | 43.018 | 444 | 234 | 10 | 19 | 455 | 20 | 451 | 1.86e-116 | 349 |
MS.gene07708.t1 | AT3G47170 | 41.719 | 477 | 239 | 15 | 1 | 452 | 1 | 463 | 3.32e-110 | 334 |
MS.gene07708.t1 | AT1G28680 | 35.230 | 457 | 263 | 16 | 11 | 452 | 3 | 441 | 2.52e-86 | 272 |
MS.gene07708.t1 | AT1G28680 | 35.248 | 383 | 220 | 13 | 11 | 381 | 3 | 369 | 9.55e-71 | 229 |
MS.gene07708.t1 | AT5G41040 | 32.018 | 456 | 278 | 14 | 7 | 456 | 12 | 441 | 8.12e-65 | 216 |
MS.gene07708.t1 | AT5G41040 | 32.018 | 456 | 278 | 14 | 7 | 456 | 28 | 457 | 1.16e-64 | 216 |
MS.gene07708.t1 | AT3G03480 | 30.519 | 462 | 284 | 14 | 2 | 451 | 9 | 445 | 1.87e-57 | 196 |
MS.gene07708.t1 | AT5G17540 | 30.586 | 461 | 278 | 16 | 7 | 452 | 4 | 437 | 8.78e-57 | 195 |
MS.gene07708.t1 | AT3G62160 | 30.508 | 413 | 238 | 11 | 8 | 406 | 1 | 378 | 1.15e-55 | 191 |
MS.gene07708.t1 | AT3G48720 | 30.227 | 440 | 275 | 16 | 19 | 452 | 16 | 429 | 7.06e-55 | 189 |
MS.gene07708.t1 | AT5G63560 | 30.752 | 452 | 277 | 15 | 7 | 452 | 4 | 425 | 7.07e-55 | 189 |
MS.gene07708.t1 | AT1G27620 | 28.281 | 442 | 278 | 12 | 18 | 451 | 15 | 425 | 2.60e-47 | 169 |
MS.gene07708.t1 | AT1G03390 | 26.724 | 464 | 303 | 18 | 2 | 447 | 7 | 451 | 1.01e-44 | 162 |
MS.gene07708.t1 | AT2G40230 | 28.381 | 451 | 279 | 17 | 12 | 448 | 5 | 425 | 3.12e-42 | 155 |
MS.gene07708.t1 | AT5G48930 | 27.857 | 420 | 270 | 16 | 10 | 414 | 1 | 402 | 2.60e-37 | 142 |
MS.gene07708.t1 | AT1G65450 | 28.419 | 468 | 273 | 20 | 10 | 452 | 16 | 446 | 4.77e-34 | 133 |
MS.gene07708.t1 | AT5G57840 | 27.094 | 406 | 260 | 15 | 10 | 397 | 1 | 388 | 3.90e-31 | 125 |
MS.gene07708.t1 | AT2G19070 | 25.821 | 457 | 293 | 16 | 20 | 451 | 12 | 447 | 2.47e-27 | 114 |
MS.gene07708.t1 | AT4G31910 | 28.763 | 372 | 218 | 13 | 29 | 370 | 28 | 382 | 1.14e-25 | 109 |
MS.gene07708.t1 | AT4G15390 | 24.416 | 471 | 297 | 18 | 6 | 454 | 2 | 435 | 1.25e-24 | 106 |
MS.gene07708.t1 | AT4G15390 | 24.416 | 471 | 297 | 18 | 6 | 454 | 2 | 435 | 1.25e-24 | 106 |
MS.gene07708.t1 | AT1G24430 | 25.063 | 399 | 249 | 16 | 69 | 455 | 62 | 422 | 1.94e-22 | 99.8 |
MS.gene07708.t1 | AT3G26040 | 24.236 | 458 | 295 | 20 | 19 | 460 | 10 | 431 | 3.25e-22 | 99.4 |
MS.gene07708.t1 | AT3G50280 | 26.098 | 387 | 240 | 15 | 69 | 425 | 59 | 429 | 1.67e-21 | 97.1 |
MS.gene07708.t1 | AT5G07860 | 29.323 | 266 | 149 | 9 | 69 | 316 | 72 | 316 | 2.22e-21 | 96.7 |
MS.gene07708.t1 | AT3G30280 | 23.932 | 468 | 288 | 17 | 19 | 460 | 13 | 438 | 2.87e-20 | 93.6 |
MS.gene07708.t1 | AT5G07870 | 28.889 | 270 | 153 | 11 | 69 | 315 | 72 | 325 | 1.03e-18 | 89.0 |
MS.gene07708.t1 | AT1G31490 | 25.693 | 397 | 248 | 15 | 19 | 397 | 13 | 380 | 1.84e-18 | 87.8 |
MS.gene07708.t1 | AT1G78990 | 25.377 | 398 | 257 | 15 | 69 | 450 | 67 | 440 | 5.96e-18 | 86.7 |
MS.gene07708.t1 | AT5G07850 | 28.679 | 265 | 163 | 8 | 69 | 320 | 70 | 321 | 9.43e-18 | 85.9 |
MS.gene07708.t1 | AT5G47980 | 25.367 | 477 | 281 | 21 | 8 | 454 | 1 | 432 | 9.51e-18 | 85.9 |
MS.gene07708.t1 | AT1G32910 | 25.310 | 403 | 264 | 16 | 66 | 450 | 62 | 445 | 1.50e-17 | 85.1 |
MS.gene07708.t1 | AT5G67150 | 24.279 | 416 | 271 | 13 | 62 | 455 | 50 | 443 | 1.88e-17 | 84.7 |
MS.gene07708.t1 | AT5G42830 | 26.552 | 290 | 183 | 10 | 69 | 341 | 64 | 340 | 5.04e-17 | 83.6 |
MS.gene07708.t1 | AT3G50270 | 25.762 | 361 | 232 | 15 | 69 | 409 | 62 | 406 | 1.67e-15 | 79.0 |
MS.gene07708.t1 | AT5G67160 | 28.364 | 275 | 170 | 12 | 69 | 330 | 56 | 316 | 2.00e-15 | 78.6 |
MS.gene07708.t1 | AT3G50280 | 26.537 | 309 | 191 | 11 | 138 | 425 | 6 | 299 | 2.01e-15 | 77.4 |
MS.gene07708.t1 | AT1G24420 | 26.726 | 449 | 283 | 23 | 19 | 455 | 12 | 426 | 5.74e-15 | 77.0 |
MS.gene07708.t1 | AT1G24420 | 26.726 | 449 | 283 | 23 | 19 | 455 | 12 | 426 | 5.74e-15 | 77.0 |
MS.gene07708.t1 | AT5G47950 | 24.890 | 454 | 272 | 20 | 19 | 454 | 13 | 415 | 6.06e-14 | 73.9 |
MS.gene07708.t1 | AT3G29635 | 27.799 | 259 | 172 | 8 | 72 | 317 | 70 | 326 | 7.45e-14 | 73.9 |
MS.gene07708.t1 | AT5G01210 | 23.844 | 411 | 272 | 13 | 83 | 463 | 76 | 475 | 1.06e-13 | 73.6 |
MS.gene07708.t1 | AT5G23940 | 24.214 | 318 | 210 | 10 | 20 | 316 | 11 | 318 | 8.92e-13 | 70.5 |
MS.gene07708.t1 | AT5G38130 | 23.848 | 369 | 245 | 12 | 49 | 397 | 55 | 407 | 1.56e-11 | 66.6 |
MS.gene07708.t1 | AT5G61160 | 25.879 | 313 | 203 | 11 | 149 | 447 | 145 | 442 | 2.69e-11 | 65.9 |
MS.gene07708.t1 | AT3G50300 | 25.949 | 316 | 204 | 13 | 69 | 370 | 59 | 358 | 5.90e-11 | 64.7 |
Find 95 sgRNAs with CRISPR-Local
Find 116 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AGCTTCAATGGCTAAGTTTA+AGG | 0.175686 | 4.1:+43095248 | MS.gene07708:CDS |
CCTTTGCATGAAGGTTATTA+TGG | 0.209215 | 4.1:+43094847 | MS.gene07708:CDS |
AACTTAGCCATTGAAGCTTT+TGG | 0.251306 | 4.1:-43095243 | None:intergenic |
CTTTGTGGTGGTTTCACAAT+TGG | 0.270838 | 4.1:+43094388 | MS.gene07708:CDS |
TAATGAGGAAAGGGAATATA+AGG | 0.273542 | 4.1:+43095016 | MS.gene07708:CDS |
GTATACTATTATCCTCTTGC+AGG | 0.282976 | 4.1:+43094157 | MS.gene07708:CDS |
TTGTTGCAAGAAGTTGATTT+TGG | 0.295712 | 4.1:+43095090 | MS.gene07708:CDS |
AACCATCTTTAAAACCTGTT+TGG | 0.297304 | 4.1:+43094497 | MS.gene07708:CDS |
CATAGTGTTTGTGATGGTTT+TGG | 0.306157 | 4.1:+43094424 | MS.gene07708:CDS |
TAAATGGTGAAACTATAAAA+AGG | 0.324098 | 4.1:+43094647 | MS.gene07708:CDS |
CATCAACTTTCATGACCTTA+AGG | 0.330136 | 4.1:-43095284 | None:intergenic |
ACCATCTTTAAAACCTGTTT+GGG | 0.340842 | 4.1:+43094498 | MS.gene07708:CDS |
CCTGTTCCTTGGAACATGTT+TGG | 0.361072 | 4.1:+43095138 | MS.gene07708:CDS |
TCATGTGAAATTTCTTTAGT+TGG | 0.361629 | 4.1:-43094613 | None:intergenic |
TGGCGATGGAGTTCCATTCT+TGG | 0.362672 | 4.1:+43094225 | MS.gene07708:CDS |
GGCTTCAAATGTGATATTAA+AGG | 0.373288 | 4.1:+43094882 | MS.gene07708:CDS |
CTTCAATGAAAGGAGGAGTT+AGG | 0.389486 | 4.1:+43095205 | MS.gene07708:CDS |
AAACACTTGGTGCATATGTT+TGG | 0.389650 | 4.1:+43094737 | MS.gene07708:CDS |
TTAGCATTTGATTCCAAGAA+TGG | 0.389942 | 4.1:-43094238 | None:intergenic |
TCATTTGGGATATCAAGATT+TGG | 0.398897 | 4.1:-43094085 | None:intergenic |
AATTTCAGAAGGTGTGGGCT+TGG | 0.400306 | 4.1:-43093993 | None:intergenic |
TGGCAGAGAATGTTGATGTT+AGG | 0.405640 | 4.1:-43094043 | None:intergenic |
TCTTCCCTTCATTATCTTGA+AGG | 0.406389 | 4.1:+43094271 | MS.gene07708:CDS |
GTTTGTAGACATAAATTGTT+TGG | 0.413551 | 4.1:-43094063 | None:intergenic |
CCAAACTAGTCCTCACCCTT+TGG | 0.414034 | 4.1:+43094345 | MS.gene07708:CDS |
ATTGAAGAATCCAACTTACT+TGG | 0.421620 | 4.1:-43095189 | None:intergenic |
GGAGGAGATGGAATTCCTTA+AGG | 0.425685 | 4.1:+43095269 | MS.gene07708:CDS |
CCAAAGGGTGAGGACTAGTT+TGG | 0.426306 | 4.1:-43094345 | None:intergenic |
ACACTTGATGATGGAAAACT+TGG | 0.434055 | 4.1:+43094190 | MS.gene07708:CDS |
CTTCCCTTCATTATCTTGAA+GGG | 0.438956 | 4.1:+43094272 | MS.gene07708:CDS |
GCTTTGAAATTGAACAATGA+TGG | 0.441181 | 4.1:+43094775 | MS.gene07708:CDS |
GTCACTTCCAAAAGCTTCAA+TGG | 0.442559 | 4.1:+43095236 | MS.gene07708:CDS |
CATCATTGGTGTTAACTGAT+TGG | 0.443121 | 4.1:+43095055 | MS.gene07708:CDS |
AGAAGCACTCTCAAAAGCTT+TGG | 0.444830 | 4.1:+43094135 | MS.gene07708:CDS |
TGTTGGAGATAATGAGGAAA+GGG | 0.449792 | 4.1:+43095007 | MS.gene07708:CDS |
TGAAGGAACTGGTGCATCAT+TGG | 0.453829 | 4.1:+43095041 | MS.gene07708:CDS |
CCAAACATGTTCCAAGGAAC+AGG | 0.453944 | 4.1:-43095138 | None:intergenic |
TGTCCTTGGTATCAAGACTA+AGG | 0.469953 | 4.1:-43093952 | None:intergenic |
TTCAGAAGGTGTGGGCTTGG+AGG | 0.471820 | 4.1:-43093990 | None:intergenic |
TGAATATTGTGCCTGTTCCT+TGG | 0.474624 | 4.1:+43095127 | MS.gene07708:CDS |
AGTAGGGGTGAGAAAACTAT+TGG | 0.476715 | 4.1:+43094819 | MS.gene07708:CDS |
TCAGAAGGTGTGGGCTTGGA+GGG | 0.480591 | 4.1:-43093989 | None:intergenic |
GGCTAAGTTTAAGGAGGAGA+TGG | 0.481711 | 4.1:+43095257 | MS.gene07708:CDS |
TTTAACAATCACAATGTCCT+TGG | 0.490781 | 4.1:-43093966 | None:intergenic |
AACTGCGAAAAGTACTCTTA+AGG | 0.492391 | 4.1:+43094534 | MS.gene07708:CDS |
AAAGGGAATATAAGGGTTGA+AGG | 0.493013 | 4.1:+43095024 | MS.gene07708:CDS |
GAAGAATCCAACTTACTTGG+AGG | 0.494568 | 4.1:-43095186 | None:intergenic |
AATATAAGGGTTGAAGGAAC+TGG | 0.495175 | 4.1:+43095030 | MS.gene07708:CDS |
CAATCCCTTCAAGATAATGA+AGG | 0.502121 | 4.1:-43094276 | None:intergenic |
GTTGTTATCTTTCCTGCAAG+AGG | 0.504380 | 4.1:-43094169 | None:intergenic |
TTGGATCCACCTTTGCATGA+AGG | 0.506278 | 4.1:+43094838 | MS.gene07708:CDS |
CTTTGAAATTGAACAATGAT+GGG | 0.507979 | 4.1:+43094776 | MS.gene07708:CDS |
TGGTATCAAGACTAAGGGAC+AGG | 0.508284 | 4.1:-43093946 | None:intergenic |
AAGATAACAACACTTGATGA+TGG | 0.511868 | 4.1:+43094181 | MS.gene07708:CDS |
TTATCTATGAGAAATTGAAA+TGG | 0.516169 | 4.1:-43094562 | None:intergenic |
TTAACTGATTGGAGACAACT+TGG | 0.516863 | 4.1:+43095066 | MS.gene07708:CDS |
TGGTGGTTTCACAATTGGAA+TGG | 0.517210 | 4.1:+43094393 | MS.gene07708:CDS |
GGTGGTTTCACAATTGGAAT+GGG | 0.521542 | 4.1:+43094394 | MS.gene07708:CDS |
GCTTCTTTGATTACACAAGC+AGG | 0.523958 | 4.1:-43094118 | None:intergenic |
TTCACAACACTTGAAACACT+TGG | 0.527865 | 4.1:+43094724 | MS.gene07708:CDS |
TTAACATGTTGGAGATAATG+AGG | 0.531085 | 4.1:+43095001 | MS.gene07708:CDS |
GACTAGTTTGGTCTTGAGAA+GGG | 0.532076 | 4.1:-43094333 | None:intergenic |
GTGACAAAGTTTCTTTGTGG+TGG | 0.537857 | 4.1:+43094376 | MS.gene07708:CDS |
GGACTAGTTTGGTCTTGAGA+AGG | 0.542115 | 4.1:-43094334 | None:intergenic |
GATGTTAGGATCATTGTCAA+TGG | 0.543218 | 4.1:-43094029 | None:intergenic |
CACTTGGTGCATATGTTTGG+AGG | 0.543669 | 4.1:+43094740 | MS.gene07708:CDS |
TGAAAGAATTTCAGAAGGTG+TGG | 0.544259 | 4.1:-43093999 | None:intergenic |
AATGAGGAAAGGGAATATAA+GGG | 0.546323 | 4.1:+43095017 | MS.gene07708:CDS |
TTTATATATTCATTATTCAA+AGG | 0.553206 | 4.1:-43094970 | None:intergenic |
GCTCAAAATGAAACTAATGA+AGG | 0.557505 | 4.1:+43094669 | MS.gene07708:CDS |
TTGTCACCTTGAAAACCAAA+GGG | 0.559737 | 4.1:-43094360 | None:intergenic |
TTGTCACATAGTGTTTGTGA+TGG | 0.560052 | 4.1:+43094418 | MS.gene07708:CDS |
CCATAATAACCTTCATGCAA+AGG | 0.562738 | 4.1:-43094847 | None:intergenic |
CTTCTTTGATTACACAAGCA+GGG | 0.565435 | 4.1:-43094117 | None:intergenic |
TTTGTCACCTTGAAAACCAA+AGG | 0.566276 | 4.1:-43094361 | None:intergenic |
AAGTTGGATTCTTCAATGAA+AGG | 0.570860 | 4.1:+43095195 | MS.gene07708:CDS |
AAGGTGACAAAGTTTCTTTG+TGG | 0.576628 | 4.1:+43094373 | MS.gene07708:CDS |
GAAAGAATTTCAGAAGGTGT+GGG | 0.577947 | 4.1:-43093998 | None:intergenic |
GTCCTTGGTATCAAGACTAA+GGG | 0.578066 | 4.1:-43093951 | None:intergenic |
GGAATCAATTGCAATGGCGA+TGG | 0.585619 | 4.1:+43094211 | MS.gene07708:CDS |
AAACTTGGAATCAATTGCAA+TGG | 0.591942 | 4.1:+43094205 | MS.gene07708:CDS |
GCACTTGCTGAACTTGCAAG+TGG | 0.593556 | 4.1:+43094466 | MS.gene07708:CDS |
ACCTTGAAAACCAAAGGGTG+AGG | 0.593623 | 4.1:-43094355 | None:intergenic |
ATGTTGGAGATAATGAGGAA+AGG | 0.596819 | 4.1:+43095006 | MS.gene07708:CDS |
AATCCCTTCAAGATAATGAA+GGG | 0.597371 | 4.1:-43094275 | None:intergenic |
TTCAATGGCTAAGTTTAAGG+AGG | 0.601083 | 4.1:+43095251 | MS.gene07708:CDS |
TGCATATGTTTGGAGGTCAA+AGG | 0.601874 | 4.1:+43094747 | MS.gene07708:CDS |
TAATAACCTTCATGCAAAGG+TGG | 0.605526 | 4.1:-43094844 | None:intergenic |
GTCCCTTAGTCTTGATACCA+AGG | 0.611096 | 4.1:+43093949 | MS.gene07708:CDS |
ACAAAACCAAACATGTTCCA+AGG | 0.619930 | 4.1:-43095144 | None:intergenic |
GTTAGGATCATTGTCAATGG+TGG | 0.626574 | 4.1:-43094026 | None:intergenic |
TTGGATTCTTCAATGAAAGG+AGG | 0.629656 | 4.1:+43095198 | MS.gene07708:CDS |
GAAAGTGAAAGAATTTCAGA+AGG | 0.631868 | 4.1:-43094004 | None:intergenic |
TGATGATGATAATGTGACGA+AGG | 0.656092 | 4.1:+43094696 | MS.gene07708:CDS |
GGTATCAAGACTAAGGGACA+GGG | 0.686582 | 4.1:-43093945 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTTATATATTCATTATTCAA+AGG | - | chr4.1:43094973-43094992 | None:intergenic | 10.0% |
!! | AAAAAATTCAATTAACATGT+TGG | + | chr4.1:43094990-43095009 | MS.gene07708:CDS | 15.0% |
!! | TAAATGGTGAAACTATAAAA+AGG | + | chr4.1:43094647-43094666 | MS.gene07708:CDS | 20.0% |
!! | TTATCTATGAGAAATTGAAA+TGG | - | chr4.1:43094565-43094584 | None:intergenic | 20.0% |
!!! | ATTTCTTTAGTTGGTAAAAA+AGG | - | chr4.1:43094607-43094626 | None:intergenic | 20.0% |
!!! | CATGAATGTTTTAACTTAAA+TGG | + | chr4.1:43094631-43094650 | MS.gene07708:CDS | 20.0% |
! | GTTTGTAGACATAAATTGTT+TGG | - | chr4.1:43094066-43094085 | None:intergenic | 25.0% |
! | TCATGTGAAATTTCTTTAGT+TGG | - | chr4.1:43094616-43094635 | None:intergenic | 25.0% |
!!! | CTTTGAAATTGAACAATGAT+GGG | + | chr4.1:43094776-43094795 | MS.gene07708:CDS | 25.0% |
AAACTTGGAATCAATTGCAA+TGG | + | chr4.1:43094205-43094224 | MS.gene07708:CDS | 30.0% | |
AAGATAACAACACTTGATGA+TGG | + | chr4.1:43094181-43094200 | MS.gene07708:CDS | 30.0% | |
AAGTTGGATTCTTCAATGAA+AGG | + | chr4.1:43095195-43095214 | MS.gene07708:CDS | 30.0% | |
AATCCCTTCAAGATAATGAA+GGG | - | chr4.1:43094278-43094297 | None:intergenic | 30.0% | |
AATGAGGAAAGGGAATATAA+GGG | + | chr4.1:43095017-43095036 | MS.gene07708:CDS | 30.0% | |
ATTGAAGAATCCAACTTACT+TGG | - | chr4.1:43095192-43095211 | None:intergenic | 30.0% | |
GAAAGTGAAAGAATTTCAGA+AGG | - | chr4.1:43094007-43094026 | None:intergenic | 30.0% | |
GCTCAAAATGAAACTAATGA+AGG | + | chr4.1:43094669-43094688 | MS.gene07708:CDS | 30.0% | |
GGCTTCAAATGTGATATTAA+AGG | + | chr4.1:43094882-43094901 | MS.gene07708:CDS | 30.0% | |
TAATGAGGAAAGGGAATATA+AGG | + | chr4.1:43095016-43095035 | MS.gene07708:CDS | 30.0% | |
TTAACATGTTGGAGATAATG+AGG | + | chr4.1:43095001-43095020 | MS.gene07708:CDS | 30.0% | |
TTAGCATTTGATTCCAAGAA+TGG | - | chr4.1:43094241-43094260 | None:intergenic | 30.0% | |
TTTAACAATCACAATGTCCT+TGG | - | chr4.1:43093969-43093988 | None:intergenic | 30.0% | |
! | TCATTTGGGATATCAAGATT+TGG | - | chr4.1:43094088-43094107 | None:intergenic | 30.0% |
! | TTATTATGGCAATGCTTTTG+TGG | + | chr4.1:43094861-43094880 | MS.gene07708:CDS | 30.0% |
!! | AACCATCTTTAAAACCTGTT+TGG | + | chr4.1:43094497-43094516 | MS.gene07708:CDS | 30.0% |
!! | ACCATCTTTAAAACCTGTTT+GGG | + | chr4.1:43094498-43094517 | MS.gene07708:CDS | 30.0% |
!! | GCTTTGAAATTGAACAATGA+TGG | + | chr4.1:43094775-43094794 | MS.gene07708:CDS | 30.0% |
!! | TTGTTGCAAGAAGTTGATTT+TGG | + | chr4.1:43095090-43095109 | MS.gene07708:CDS | 30.0% |
!!! | ACTATGTTTTGTTTAGCAGT+AGG | + | chr4.1:43094802-43094821 | MS.gene07708:CDS | 30.0% |
!!! | CTATGTTTTGTTTAGCAGTA+GGG | + | chr4.1:43094803-43094822 | MS.gene07708:CDS | 30.0% |
!!! | TATGTTTTGTTTAGCAGTAG+GGG | + | chr4.1:43094804-43094823 | MS.gene07708:CDS | 30.0% |
AAAGGGAATATAAGGGTTGA+AGG | + | chr4.1:43095024-43095043 | MS.gene07708:CDS | 35.0% | |
AAGGTGACAAAGTTTCTTTG+TGG | + | chr4.1:43094373-43094392 | MS.gene07708:CDS | 35.0% | |
AATATAAGGGTTGAAGGAAC+TGG | + | chr4.1:43095030-43095049 | MS.gene07708:CDS | 35.0% | |
ACAAAACCAAACATGTTCCA+AGG | - | chr4.1:43095147-43095166 | None:intergenic | 35.0% | |
ACTTACTTGGAGGCAAAAAA+AGG | - | chr4.1:43095179-43095198 | None:intergenic | 35.0% | |
AGCTTCAATGGCTAAGTTTA+AGG | + | chr4.1:43095248-43095267 | MS.gene07708:CDS | 35.0% | |
AGCTTCACAACTTCAAAAAG+TGG | - | chr4.1:43094928-43094947 | None:intergenic | 35.0% | |
ATGTTGGAGATAATGAGGAA+AGG | + | chr4.1:43095006-43095025 | MS.gene07708:CDS | 35.0% | |
CAATCCCTTCAAGATAATGA+AGG | - | chr4.1:43094279-43094298 | None:intergenic | 35.0% | |
CATCAACTTTCATGACCTTA+AGG | - | chr4.1:43095287-43095306 | None:intergenic | 35.0% | |
CCATAATAACCTTCATGCAA+AGG | - | chr4.1:43094850-43094869 | None:intergenic | 35.0% | |
CCTTTGCATGAAGGTTATTA+TGG | + | chr4.1:43094847-43094866 | MS.gene07708:CDS | 35.0% | |
CTTCCCTTCATTATCTTGAA+GGG | + | chr4.1:43094272-43094291 | MS.gene07708:CDS | 35.0% | |
CTTCTTTGATTACACAAGCA+GGG | - | chr4.1:43094120-43094139 | None:intergenic | 35.0% | |
GATGTTAGGATCATTGTCAA+TGG | - | chr4.1:43094032-43094051 | None:intergenic | 35.0% | |
GTATACTATTATCCTCTTGC+AGG | + | chr4.1:43094157-43094176 | MS.gene07708:CDS | 35.0% | |
TAATAACCTTCATGCAAAGG+TGG | - | chr4.1:43094847-43094866 | None:intergenic | 35.0% | |
TCTTCCCTTCATTATCTTGA+AGG | + | chr4.1:43094271-43094290 | MS.gene07708:CDS | 35.0% | |
TGAAAGAATTTCAGAAGGTG+TGG | - | chr4.1:43094002-43094021 | None:intergenic | 35.0% | |
TGTTCCAACAGCACAAAAAT+TGG | + | chr4.1:43094300-43094319 | MS.gene07708:CDS | 35.0% | |
TGTTGGAGATAATGAGGAAA+GGG | + | chr4.1:43095007-43095026 | MS.gene07708:CDS | 35.0% | |
TTAACTGATTGGAGACAACT+TGG | + | chr4.1:43095066-43095085 | MS.gene07708:CDS | 35.0% | |
TTCAATGGCTAAGTTTAAGG+AGG | + | chr4.1:43095251-43095270 | MS.gene07708:CDS | 35.0% | |
TTCACAACACTTGAAACACT+TGG | + | chr4.1:43094724-43094743 | MS.gene07708:CDS | 35.0% | |
TTGGATTCTTCAATGAAAGG+AGG | + | chr4.1:43095198-43095217 | MS.gene07708:CDS | 35.0% | |
TTGTCACATAGTGTTTGTGA+TGG | + | chr4.1:43094418-43094437 | MS.gene07708:CDS | 35.0% | |
TTGTCACCTTGAAAACCAAA+GGG | - | chr4.1:43094363-43094382 | None:intergenic | 35.0% | |
TTTGTCACCTTGAAAACCAA+AGG | - | chr4.1:43094364-43094383 | None:intergenic | 35.0% | |
! | AACACCAATTTTTGTGCTGT+TGG | - | chr4.1:43094307-43094326 | None:intergenic | 35.0% |
! | AACTTAGCCATTGAAGCTTT+TGG | - | chr4.1:43095246-43095265 | None:intergenic | 35.0% |
! | CATAGTGTTTGTGATGGTTT+TGG | + | chr4.1:43094424-43094443 | MS.gene07708:CDS | 35.0% |
! | GAAAGAATTTCAGAAGGTGT+GGG | - | chr4.1:43094001-43094020 | None:intergenic | 35.0% |
! | TGATGATGATAATGTGACGA+AGG | + | chr4.1:43094696-43094715 | MS.gene07708:CDS | 35.0% |
!! | AAACACTTGGTGCATATGTT+TGG | + | chr4.1:43094737-43094756 | MS.gene07708:CDS | 35.0% |
!! | AACTGCGAAAAGTACTCTTA+AGG | + | chr4.1:43094534-43094553 | MS.gene07708:CDS | 35.0% |
!! | ACACTTGATGATGGAAAACT+TGG | + | chr4.1:43094190-43094209 | MS.gene07708:CDS | 35.0% |
!! | AGAAGTTGATTTTGGATGGA+AGG | + | chr4.1:43095098-43095117 | MS.gene07708:CDS | 35.0% |
!! | CATCATTGGTGTTAACTGAT+TGG | + | chr4.1:43095055-43095074 | MS.gene07708:CDS | 35.0% |
!! | TGCAAGAAGTTGATTTTGGA+TGG | + | chr4.1:43095094-43095113 | MS.gene07708:CDS | 35.0% |
!!! | TCCCAAACAGGTTTTAAAGA+TGG | - | chr4.1:43094502-43094521 | None:intergenic | 35.0% |
!!! | TTGGAACATGTTTGGTTTTG+TGG | + | chr4.1:43095146-43095165 | MS.gene07708:CDS | 35.0% |
!!! | TTTTTTGCCTCCAAGTAAGT+TGG | + | chr4.1:43095179-43095198 | MS.gene07708:CDS | 35.0% |
AGTAGGGGTGAGAAAACTAT+TGG | + | chr4.1:43094819-43094838 | MS.gene07708:CDS | 40.0% | |
CTTCAATGAAAGGAGGAGTT+AGG | + | chr4.1:43095205-43095224 | MS.gene07708:CDS | 40.0% | |
CTTTGTGGTGGTTTCACAAT+TGG | + | chr4.1:43094388-43094407 | MS.gene07708:CDS | 40.0% | |
GAAGAATCCAACTTACTTGG+AGG | - | chr4.1:43095189-43095208 | None:intergenic | 40.0% | |
GCTTCTTTGATTACACAAGC+AGG | - | chr4.1:43094121-43094140 | None:intergenic | 40.0% | |
GGTGGTTTCACAATTGGAAT+GGG | + | chr4.1:43094394-43094413 | MS.gene07708:CDS | 40.0% | |
GTCACTTCCAAAAGCTTCAA+TGG | + | chr4.1:43095236-43095255 | MS.gene07708:CDS | 40.0% | |
GTCCTTGGTATCAAGACTAA+GGG | - | chr4.1:43093954-43093973 | None:intergenic | 40.0% | |
GTGACAAAGTTTCTTTGTGG+TGG | + | chr4.1:43094376-43094395 | MS.gene07708:CDS | 40.0% | |
GTTAGGATCATTGTCAATGG+TGG | - | chr4.1:43094029-43094048 | None:intergenic | 40.0% | |
GTTGTTATCTTTCCTGCAAG+AGG | - | chr4.1:43094172-43094191 | None:intergenic | 40.0% | |
TGAATATTGTGCCTGTTCCT+TGG | + | chr4.1:43095127-43095146 | MS.gene07708:CDS | 40.0% | |
TGCATATGTTTGGAGGTCAA+AGG | + | chr4.1:43094747-43094766 | MS.gene07708:CDS | 40.0% | |
TGGCAGAGAATGTTGATGTT+AGG | - | chr4.1:43094046-43094065 | None:intergenic | 40.0% | |
TGGTGGTTTCACAATTGGAA+TGG | + | chr4.1:43094393-43094412 | MS.gene07708:CDS | 40.0% | |
TGTCCTTGGTATCAAGACTA+AGG | - | chr4.1:43093955-43093974 | None:intergenic | 40.0% | |
! | TTACACAAGCAGGGTCTTTT+TGG | - | chr4.1:43094111-43094130 | None:intergenic | 40.0% |
!! | AGAAGCACTCTCAAAAGCTT+TGG | + | chr4.1:43094135-43094154 | MS.gene07708:CDS | 40.0% |
!! | CAGGGTCTTTTTGGTCATTT+GGG | - | chr4.1:43094102-43094121 | None:intergenic | 40.0% |
!! | GACTAGTTTGGTCTTGAGAA+GGG | - | chr4.1:43094336-43094355 | None:intergenic | 40.0% |
AATCTCTCTCTCTCCCAAAC+AGG | - | chr4.1:43094514-43094533 | None:intergenic | 45.0% | |
ACCTTGAAAACCAAAGGGTG+AGG | - | chr4.1:43094358-43094377 | None:intergenic | 45.0% | |
CCAAACATGTTCCAAGGAAC+AGG | - | chr4.1:43095141-43095160 | None:intergenic | 45.0% | |
CCTGTTCCTTGGAACATGTT+TGG | + | chr4.1:43095138-43095157 | MS.gene07708:CDS | 45.0% | |
GGAATCAATTGCAATGGCGA+TGG | + | chr4.1:43094211-43094230 | MS.gene07708:CDS | 45.0% | |
GGAGGAGATGGAATTCCTTA+AGG | + | chr4.1:43095269-43095288 | MS.gene07708:CDS | 45.0% | |
GGCTAAGTTTAAGGAGGAGA+TGG | + | chr4.1:43095257-43095276 | MS.gene07708:CDS | 45.0% | |
GGTATCAAGACTAAGGGACA+GGG | - | chr4.1:43093948-43093967 | None:intergenic | 45.0% | |
TGAAGGAACTGGTGCATCAT+TGG | + | chr4.1:43095041-43095060 | MS.gene07708:CDS | 45.0% | |
TGGTATCAAGACTAAGGGAC+AGG | - | chr4.1:43093949-43093968 | None:intergenic | 45.0% | |
TTGGATCCACCTTTGCATGA+AGG | + | chr4.1:43094838-43094857 | MS.gene07708:CDS | 45.0% | |
! | AATTTCAGAAGGTGTGGGCT+TGG | - | chr4.1:43093996-43094015 | None:intergenic | 45.0% |
!! | CACTTGGTGCATATGTTTGG+AGG | + | chr4.1:43094740-43094759 | MS.gene07708:CDS | 45.0% |
!! | GCAGGGTCTTTTTGGTCATT+TGG | - | chr4.1:43094103-43094122 | None:intergenic | 45.0% |
!! | GGACTAGTTTGGTCTTGAGA+AGG | - | chr4.1:43094337-43094356 | None:intergenic | 45.0% |
!! | GTCCCTTAGTCTTGATACCA+AGG | + | chr4.1:43093949-43093968 | MS.gene07708:CDS | 45.0% |
!!! | TCCTCACCCTTTGGTTTTCA+AGG | + | chr4.1:43094354-43094373 | MS.gene07708:CDS | 45.0% |
CCAAACTAGTCCTCACCCTT+TGG | + | chr4.1:43094345-43094364 | MS.gene07708:CDS | 50.0% | |
TGGCGATGGAGTTCCATTCT+TGG | + | chr4.1:43094225-43094244 | MS.gene07708:CDS | 50.0% | |
! | GCACTTGCTGAACTTGCAAG+TGG | + | chr4.1:43094466-43094485 | MS.gene07708:CDS | 50.0% |
!! | CCAAAGGGTGAGGACTAGTT+TGG | - | chr4.1:43094348-43094367 | None:intergenic | 50.0% |
! | TCAGAAGGTGTGGGCTTGGA+GGG | - | chr4.1:43093992-43094011 | None:intergenic | 55.0% |
! | TTCAGAAGGTGTGGGCTTGG+AGG | - | chr4.1:43093993-43094012 | None:intergenic | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.1 | gene | 43093926 | 43095320 | 43093926 | ID=MS.gene07708 |
chr4.1 | mRNA | 43093926 | 43095320 | 43093926 | ID=MS.gene07708.t1;Parent=MS.gene07708 |
chr4.1 | exon | 43093926 | 43095320 | 43093926 | ID=MS.gene07708.t1.exon1;Parent=MS.gene07708.t1 |
chr4.1 | CDS | 43093926 | 43095320 | 43093926 | ID=cds.MS.gene07708.t1;Parent=MS.gene07708.t1 |
Gene Sequence |
Protein sequence |