AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene41582

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene41582.t1 MTR_3g465910 88.462 468 50 3 1 468 1 464 0.0 860
MS.gene41582.t1 MTR_3g465930 87.225 454 58 0 1 454 1 454 0.0 842
MS.gene41582.t1 MTR_3g465950 78.222 450 86 3 1 449 1 439 0.0 716
MS.gene41582.t1 MTR_3g465980 67.672 464 140 6 1 462 1 456 0.0 650
MS.gene41582.t1 MTR_3g465990 64.871 464 153 6 1 462 1 456 0.0 634
MS.gene41582.t1 MTR_3g465870 70.460 457 90 6 1 454 1 415 0.0 634
MS.gene41582.t1 MTR_3g465880 65.532 470 147 9 1 462 1 463 0.0 620
MS.gene41582.t1 MTR_6g053810 60.000 460 172 8 8 462 9 461 0.0 548
MS.gene41582.t1 MTR_4g055170 49.123 456 206 10 8 454 10 448 3.80e-143 419
MS.gene41582.t1 MTR_2g015430 31.209 455 283 16 7 455 1 431 5.77e-62 209
MS.gene41582.t1 MTR_7g027175 32.250 400 230 14 17 405 23 392 5.28e-43 158
MS.gene41582.t1 MTR_1g040175 30.172 348 221 9 7 348 6 337 4.02e-40 150
MS.gene41582.t1 MTR_8g096530 28.261 460 281 15 8 457 5 425 4.05e-39 147
MS.gene41582.t1 MTR_1g053315 28.200 461 285 17 19 462 30 461 1.42e-37 144
MS.gene41582.t1 MTR_7g110610 32.537 335 168 10 17 348 12 291 1.16e-36 140
MS.gene41582.t1 MTR_3g071320 29.238 407 247 14 10 400 5 386 3.03e-36 139
MS.gene41582.t1 MTR_1g040215 28.857 350 223 9 7 348 6 337 6.20e-36 139
MS.gene41582.t1 MTR_1g081660 25.966 466 305 17 7 462 15 450 1.01e-35 138
MS.gene41582.t1 MTR_3g098980 28.788 462 279 17 8 460 12 432 1.81e-35 137
MS.gene41582.t1 MTR_5g076700 26.718 393 261 12 17 403 17 388 6.40e-35 136
MS.gene41582.t1 MTR_7g114520 29.598 348 226 10 7 348 8 342 4.79e-34 134
MS.gene41582.t1 MTR_7g114550 29.464 336 220 9 17 348 17 339 1.29e-32 130
MS.gene41582.t1 MTR_7g114470 26.108 406 272 13 7 405 8 392 4.94e-32 128
MS.gene41582.t1 MTR_7g114490 27.960 397 254 15 17 405 17 389 3.04e-31 126
MS.gene41582.t1 MTR_7g114560 28.869 336 222 9 17 348 17 339 7.33e-31 125
MS.gene41582.t1 MTR_3g112180 26.034 411 231 13 18 400 20 385 5.05e-30 122
MS.gene41582.t1 MTR_2g105330 26.238 404 260 13 10 400 3 381 1.92e-27 114
MS.gene41582.t1 MTR_2g064495 25.918 463 293 16 10 459 3 428 9.45e-27 112
MS.gene41582.t1 MTR_1g040315 28.086 324 203 10 4 319 3 304 6.59e-26 110
MS.gene41582.t1 MTR_8g075610 27.072 362 232 11 17 369 1 339 8.17e-26 109
MS.gene41582.t1 MTR_1g040320 27.246 345 199 12 7 348 6 301 3.54e-25 108
MS.gene41582.t1 MTR_3g049150 27.132 387 230 17 18 380 10 368 4.09e-25 108
MS.gene41582.t1 MTR_4g007540 26.108 406 259 14 10 400 3 382 1.94e-24 105
MS.gene41582.t1 MTR_4g097090 26.957 345 216 9 18 346 17 341 8.20e-24 104
MS.gene41582.t1 MTR_3g026950 23.454 469 292 16 18 454 10 443 1.29e-23 103
MS.gene41582.t1 MTR_4g127650 29.446 343 209 12 18 346 18 341 1.77e-23 103
MS.gene41582.t1 MTR_7g086000 28.032 371 231 15 18 370 12 364 5.23e-23 102
MS.gene41582.t1 MTR_1g040195 26.901 342 197 13 17 349 16 313 1.19e-21 97.8
MS.gene41582.t1 MTR_0502s0010 30.400 250 152 9 110 349 2 239 1.48e-21 94.0
MS.gene41582.t1 MTR_7g085930 25.522 431 262 18 17 410 13 421 9.27e-21 95.5
MS.gene41582.t1 MTR_4g013050 23.833 407 246 12 18 410 12 368 1.22e-20 94.4
MS.gene41582.t1 MTR_7g084940 26.566 399 236 16 17 395 23 384 1.77e-18 88.2
MS.gene41582.t1 MTR_7g085990 25.606 371 244 13 17 369 9 365 3.28e-18 87.4
MS.gene41582.t1 MTR_3g102020 27.076 277 176 8 70 334 70 332 1.98e-17 85.1
MS.gene41582.t1 MTR_3g101960 27.586 290 170 8 64 334 63 331 3.23e-17 84.3
MS.gene41582.t1 MTR_3g102010 26.493 268 167 7 69 320 65 318 1.34e-16 82.4
MS.gene41582.t1 MTR_0042s0190 29.508 183 113 5 172 348 1 173 2.48e-16 80.1
MS.gene41582.t1 MTR_4g022720 25.556 270 191 4 69 334 55 318 5.54e-15 77.4
MS.gene41582.t1 MTR_7g056087 24.390 410 257 17 9 394 3 383 8.59e-15 76.6
MS.gene41582.t1 MTR_7g114510 28.358 201 130 6 154 348 8 200 1.93e-14 74.7
MS.gene41582.t1 MTR_3g101930 25.091 275 184 6 70 332 71 335 3.23e-14 75.1
MS.gene41582.t1 MTR_3g101900 25.874 286 170 9 69 334 66 329 4.56e-14 74.7
MS.gene41582.t1 MTR_3g101970 26.715 277 163 10 70 334 70 318 5.18e-14 74.3
MS.gene41582.t1 MTR_4g022825 24.164 269 197 4 71 334 57 323 2.14e-13 72.4
MS.gene41582.t1 MTR_7g114960 24.765 319 194 13 69 369 63 353 2.81e-12 68.9
MS.gene41582.t1 MTR_4g022800 25.263 285 189 7 64 334 50 324 3.03e-12 68.9
MS.gene41582.t1 MTR_3g450710 23.224 366 233 14 69 405 65 411 3.39e-12 68.9
MS.gene41582.t1 MTR_7g084910 26.888 331 203 12 17 331 24 331 4.02e-12 68.6
MS.gene41582.t1 MTR_4g022670 25.874 286 187 9 69 339 55 330 1.41e-11 67.0
MS.gene41582.t1 MTR_8g041770 24.535 269 187 6 69 332 64 321 2.84e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene41582.t1 AT5G07080 39.479 461 234 13 8 454 12 441 2.24e-95 296
MS.gene41582.t1 AT2G25150 39.560 455 247 12 8 454 11 445 1.11e-91 287
MS.gene41582.t1 AT2G23510 37.527 461 260 13 8 462 11 449 4.27e-84 267
MS.gene41582.t1 AT3G47170 38.147 464 251 15 10 454 12 458 6.03e-83 265
MS.gene41582.t1 AT1G28680 34.764 466 272 16 10 466 4 446 2.44e-73 239
MS.gene41582.t1 AT1G28680 36.729 373 211 13 10 373 4 360 3.63e-62 208
MS.gene41582.t1 AT3G62160 31.050 438 248 16 16 444 11 403 3.41e-45 164
MS.gene41582.t1 AT5G41040 29.437 462 279 16 8 459 15 439 3.70e-43 159
MS.gene41582.t1 AT5G41040 29.437 462 279 16 8 459 31 455 4.82e-43 159
MS.gene41582.t1 AT3G48720 29.476 458 254 19 17 454 16 424 8.81e-42 155
MS.gene41582.t1 AT3G03480 29.204 452 288 17 8 454 17 441 9.17e-39 147
MS.gene41582.t1 AT1G03390 26.969 419 264 13 20 423 32 423 1.57e-33 132
MS.gene41582.t1 AT5G63560 30.147 408 242 18 8 405 7 381 2.39e-33 131
MS.gene41582.t1 AT5G17540 29.330 358 228 13 8 357 7 347 6.30e-33 130
MS.gene41582.t1 AT1G27620 28.501 407 239 15 11 401 10 380 2.88e-32 128
MS.gene41582.t1 AT2G40230 27.708 397 262 11 10 400 5 382 9.23e-32 127
MS.gene41582.t1 AT5G48930 26.812 414 250 15 8 400 1 382 2.47e-28 117
MS.gene41582.t1 AT2G19070 28.078 463 276 20 18 454 12 443 6.47e-24 104
MS.gene41582.t1 AT5G57840 27.792 385 218 17 8 367 1 350 6.53e-22 98.6
MS.gene41582.t1 AT4G31910 26.877 413 251 21 28 412 29 418 3.30e-19 90.5
MS.gene41582.t1 AT1G24430 28.481 316 172 17 17 318 12 287 8.28e-19 89.4
MS.gene41582.t1 AT1G65450 26.065 399 253 15 12 395 21 392 1.45e-18 88.6
MS.gene41582.t1 AT5G23940 27.652 264 165 9 70 318 66 318 1.80e-12 69.7
MS.gene41582.t1 AT3G26040 24.211 285 183 11 8 286 1 258 4.59e-12 68.6
MS.gene41582.t1 AT5G47950 31.122 196 114 8 8 199 4 182 1.08e-11 67.0
MS.gene41582.t1 AT5G07860 23.346 257 178 8 69 318 72 316 8.12e-11 64.7

Find 94 sgRNAs with CRISPR-Local

Find 223 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATACCAACGGTACTGAATT+TGG 0.155661 3.1:-50243883 MS.gene41582:CDS
TTTCAGGAAAATTTAGATTT+TGG 0.167927 3.1:-50243004 MS.gene41582:CDS
AAGTTACCCTTTGGTGTTAA+TGG 0.185564 3.1:-50243743 MS.gene41582:CDS
ACTTTACCTAAAGGGTATTA+TGG 0.240183 3.1:-50243253 MS.gene41582:CDS
CTTTGTGGTGGTTTCACAAT+TGG 0.270838 3.1:-50243709 MS.gene41582:CDS
ATACCAACGGTACTGAATTT+GGG 0.304721 3.1:-50243882 MS.gene41582:CDS
CACAAACTCAATAAACTCTT+TGG 0.322202 3.1:-50243110 MS.gene41582:CDS
CACAGAAATTGCAAAACATT+TGG 0.334670 3.1:-50243794 MS.gene41582:CDS
GGATGGTTTGAGCATGGAAT+TGG 0.352453 3.1:-50243074 MS.gene41582:CDS
TCATGATCATCAAGTTTGTT+AGG 0.363863 3.1:+50242905 None:intergenic
CTGATAAGTGGCAGAATCTA+AGG 0.363910 3.1:-50241575 MS.gene41582:CDS
GTCTTGCTTCCACTAGCTCT+TGG 0.369214 3.1:+50241625 None:intergenic
GAATTGCCATAATACCCTTT+AGG 0.371067 3.1:+50243247 None:intergenic
TCTAACGGAGTGGAAACATT+TGG 0.373940 3.1:-50243029 MS.gene41582:CDS
CCTTTCTTCTCTTCATTACC+TGG 0.381983 3.1:-50243827 MS.gene41582:CDS
ATCGGTATACATGAACAGTT+TGG 0.382280 3.1:+50244922 None:intergenic
CTAACGGAGTGGAAACATTT+GGG 0.386174 3.1:-50243028 MS.gene41582:CDS
CTAACTCCTCCATCCATTGA+TGG 0.386304 3.1:+50242881 None:intergenic
AAATTCAGTACCGTTGGTAT+TGG 0.387756 3.1:+50243885 None:intergenic
AACATAGGCATAGCAGCAAC+AGG 0.398229 3.1:+50242842 None:intergenic
ATTATGATACTTTACCTAAA+GGG 0.400601 3.1:-50243261 MS.gene41582:CDS
CATCAATGGATGGAGGAGTT+AGG 0.420940 3.1:-50242880 MS.gene41582:CDS
CATGCTATTTGTGACGGATT+TGG 0.423939 3.1:-50243673 MS.gene41582:CDS
AGTCTCTTTAATCAGCTTAA+CGG 0.431509 3.1:+50243162 None:intergenic
TAAGGATAAAAGTTACCCTT+TGG 0.432771 3.1:-50243752 MS.gene41582:CDS
AAGAGAAGAAAGGGTGCAAT+TGG 0.440302 3.1:+50243837 None:intergenic
GATTGCTTTCTCATATTCCA+TGG 0.455266 3.1:+50245055 None:intergenic
GGTGGTTTCACAATTGGAAT+GGG 0.460166 3.1:-50243703 MS.gene41582:CDS
TCCATGGGACATTGTGGAAA+TGG 0.468394 3.1:+50243541 None:intergenic
TCTTGATATTCCTTCTCCTA+AGG 0.470510 3.1:-50243770 MS.gene41582:CDS
TCCCACACAGGTTTCACTGA+TGG 0.471401 3.1:+50243598 None:intergenic
TGGTGGTTTCACAATTGGAA+TGG 0.478781 3.1:-50243704 MS.gene41582:CDS
GATTATGATACTTTACCTAA+AGG 0.479280 3.1:-50243262 MS.gene41582:CDS
GCTAGTGGAAGCAAGACATC+AGG 0.481223 3.1:-50241619 MS.gene41582:CDS
GCAAGCATCTTGCATGGTGC+AGG 0.485601 3.1:+50242956 None:intergenic
TTGTCACCATTAACACCAAA+GGG 0.486355 3.1:+50243737 None:intergenic
TTGCTGCTATGCCTATGTTC+AGG 0.493790 3.1:-50242838 MS.gene41582:intron
TTGCTTCCACTAGCTCTTGG+AGG 0.496887 3.1:+50241628 None:intergenic
ATAGAGAAAGAATACAAGAA+GGG 0.499294 3.1:+50244982 None:intergenic
TGAATGAAAATGAAAACATA+AGG 0.501906 3.1:-50243405 MS.gene41582:CDS
TCAATTTCATACCTGAACAT+AGG 0.506283 3.1:+50242827 None:intergenic
GATAGAGAAAGAATACAAGA+AGG 0.511764 3.1:+50244981 None:intergenic
TTTCTGTGTTAGTATTGTCC+AGG 0.512010 3.1:+50243809 None:intergenic
TCGGTATACATGAACAGTTT+GGG 0.514380 3.1:+50244923 None:intergenic
GCTTCTTTGAATACATTACA+AGG 0.514984 3.1:+50244861 None:intergenic
AGCAATCCTAAGGATTGAAA+AGG 0.523446 3.1:-50245039 MS.gene41582:CDS
AGACTAGCGAGACATGCTAA+TGG 0.523859 3.1:-50243925 MS.gene41582:CDS
AGCTTAACGGTTTCATAGAG+TGG 0.529369 3.1:+50243175 None:intergenic
CCAGGTAATGAAGAGAAGAA+AGG 0.533118 3.1:+50243827 None:intergenic
AGAAAGAATACAAGAAGGGG+TGG 0.542355 3.1:+50244986 None:intergenic
TACCAACGGTACTGAATTTG+GGG 0.542547 3.1:-50243881 MS.gene41582:CDS
TGGTATCAGACGAAACTTGA+CGG 0.543377 3.1:-50243284 MS.gene41582:CDS
CAGGTAATGAAGAGAAGAAA+GGG 0.549845 3.1:+50243828 None:intergenic
TGACAGCCTCCAAGAGCTAG+TGG 0.554260 3.1:-50241634 MS.gene41582:intron
TGGTGCAGCAACGGTTCTAA+CGG 0.559028 3.1:-50243044 MS.gene41582:CDS
GCAGTTGTTGAACTTGCAAG+TGG 0.559166 3.1:-50243631 MS.gene41582:CDS
TGATGATCATGATCCATCAA+TGG 0.560359 3.1:-50242894 MS.gene41582:CDS
TTTGTCACCATTAACACCAA+AGG 0.568610 3.1:+50243736 None:intergenic
GTGACAAAGTTTCTTTGTGG+TGG 0.569090 3.1:-50243721 MS.gene41582:CDS
AAGTGCTTGCAGTTTATGTG+TGG 0.572740 3.1:-50243369 MS.gene41582:CDS
TTTCTGTCCATGGGACATTG+TGG 0.573049 3.1:+50243535 None:intergenic
GGAAGCTAGTGGTGCAGCAA+CGG 0.573867 3.1:-50243053 MS.gene41582:CDS
TTGTGAACTATGCTGATAAG+TGG 0.574065 3.1:-50241587 MS.gene41582:CDS
ATGTCACATGCTATTTGTGA+CGG 0.574392 3.1:-50243679 MS.gene41582:CDS
AATATGAGAAAGCAATCCTA+AGG 0.574396 3.1:-50245049 MS.gene41582:CDS
TTGGAGACGAATCAAGAGGA+TGG 0.583764 3.1:-50243091 MS.gene41582:CDS
TCAAGAGGATGGTTTGAGCA+TGG 0.589110 3.1:-50243080 MS.gene41582:CDS
GTGGCAGAATCTAAGGCAGT+TGG 0.590813 3.1:-50241568 MS.gene41582:CDS
TGAGAAAATACATGTATCGA+TGG 0.592613 3.1:+50242931 None:intergenic
GCAGTTGGTGAATAGAACCT+TGG 0.596323 3.1:-50241553 MS.gene41582:CDS
TGCTTGCAGTTTATGTGTGG+AGG 0.596670 3.1:-50243366 MS.gene41582:CDS
ACCATTTCCACAATGTCCCA+TGG 0.598120 3.1:-50243542 MS.gene41582:CDS
AATTGTTTGAAGATCATCCA+AGG 0.602768 3.1:+50241536 None:intergenic
AACCCCAAATTCAGTACCGT+TGG 0.605483 3.1:+50243879 None:intergenic
ATGGTGACAAAGTTTCTTTG+TGG 0.609696 3.1:-50243724 MS.gene41582:CDS
TAGAGAAAGAATACAAGAAG+GGG 0.613850 3.1:+50244983 None:intergenic
GATCATGATCCATCAATGGA+TGG 0.615987 3.1:-50242890 MS.gene41582:CDS
AAAACTAGTATACCTGCTAG+AGG 0.619040 3.1:+50244810 None:intergenic
CATGAATTGCTGATGATGAT+CGG 0.619995 3.1:+50244904 None:intergenic
CTTCTTTGAATACATTACAA+GGG 0.623039 3.1:+50244862 None:intergenic
ATTCAAAGAAGCGCTGTCGA+AGG 0.626139 3.1:-50244850 MS.gene41582:CDS
GAAAATACATGTATCGATGG+TGG 0.627394 3.1:+50242934 None:intergenic
GTGGTTTCACAATTGGAATG+GGG 0.639088 3.1:-50243702 MS.gene41582:CDS
CTATCAACACTTGACAACAA+AGG 0.641697 3.1:-50244963 MS.gene41582:CDS
CAGCAACGGTTCTAACGGAG+TGG 0.649858 3.1:-50243039 MS.gene41582:CDS
CTCTTTGGAGACGAATCAAG+AGG 0.650080 3.1:-50243095 MS.gene41582:CDS
CATGATCCATCAATGGATGG+AGG 0.654646 3.1:-50242887 MS.gene41582:CDS
ACTTATCAGCATAGTTCACA+AGG 0.655913 3.1:+50241589 None:intergenic
AGAGTCAATGCCAATACCAA+CGG 0.657356 3.1:-50243895 MS.gene41582:CDS
ACATAGGCATAGCAGCAACA+GGG 0.673752 3.1:+50242843 None:intergenic
AGCCATCAGTGAAACCTGTG+TGG 0.685980 3.1:-50243600 MS.gene41582:CDS
ATGGTGGCAAGCATCTTGCA+TGG 0.692293 3.1:+50242950 None:intergenic
GCCATCAGTGAAACCTGTGT+GGG 0.717270 3.1:-50243599 MS.gene41582:CDS
AGCATGGAATTGGAAGCTAG+TGG 0.746349 3.1:-50243064 MS.gene41582:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CAATTTTTTAAAAATTTATG+TGG - chr3.1:50244607-50244626 MS.gene41582:intron 10.0%
!!! GAAAAAAAATAGTTTTATTT+AGG + chr3.1:50241998-50242017 None:intergenic 10.0%
!! AAAAGACTAATAATTACTAT+CGG + chr3.1:50241806-50241825 None:intergenic 15.0%
!! AATACTATAAAACAGAAATT+AGG + chr3.1:50244043-50244062 None:intergenic 15.0%
!! ATACTATAAAACAGAAATTA+GGG + chr3.1:50244042-50244061 None:intergenic 15.0%
!! GATAGTAGATTAATAAATAA+AGG - chr3.1:50242172-50242191 MS.gene41582:intron 15.0%
!! TAAATAAAGGTCATATATTA+TGG - chr3.1:50242185-50242204 MS.gene41582:intron 15.0%
!! TTAATCTACTATCAAAAAAA+AGG + chr3.1:50242165-50242184 None:intergenic 15.0%
!!! AAACAATTTTTTTTCACATA+CGG - chr3.1:50242523-50242542 MS.gene41582:intron 15.0%
!!! ACAATATTGTTTTAAAGTAA+AGG - chr3.1:50243113-50243132 MS.gene41582:CDS 15.0%
!!! CAATATTGTTTTAAAGTAAA+GGG - chr3.1:50243114-50243133 MS.gene41582:CDS 15.0%
!!! CTTAAATGAAGTTTATTTTA+TGG + chr3.1:50241830-50241849 None:intergenic 15.0%
!!! TAGAGAGATTTTTTTTTTAA+TGG - chr3.1:50244454-50244473 MS.gene41582:intron 15.0%
!!! TTTATTTGTTGAAATTAAAG+TGG - chr3.1:50243780-50243799 MS.gene41582:CDS 15.0%
!!! TTTTATCATGAAATGTTATA+AGG - chr3.1:50244136-50244155 MS.gene41582:intron 15.0%
!!! TTTTTAAAAATTTATGTGGA+CGG - chr3.1:50244611-50244630 MS.gene41582:intron 15.0%
!! AAGTAAAAAATATAGGACAA+TGG + chr3.1:50242327-50242346 None:intergenic 20.0%
!! ATTATGATACTTTACCTAAA+GGG - chr3.1:50243313-50243332 MS.gene41582:CDS 20.0%
!! CAATGTTGTTAAAAATTTGT+TGG + chr3.1:50244703-50244722 None:intergenic 20.0%
!! CATTATTTCATTAAACAACA+AGG - chr3.1:50244183-50244202 MS.gene41582:intron 20.0%
!! GTGAAAAAAAATTGTTTGTT+AGG + chr3.1:50242520-50242539 None:intergenic 20.0%
!! TGAATGAAAATGAAAACATA+AGG - chr3.1:50243169-50243188 MS.gene41582:CDS 20.0%
!! TGTAGTTTATAATGTGTAAA+AGG - chr3.1:50244654-50244673 MS.gene41582:intron 20.0%
!! TTACTTATATATATCCTCTT+TGG - chr3.1:50244092-50244111 MS.gene41582:intron 20.0%
!! TTTAATGAAATAATGTATCG+AGG + chr3.1:50244178-50244197 None:intergenic 20.0%
!!! AAAAAAATCTCTCTAAGAAT+TGG + chr3.1:50244449-50244468 None:intergenic 20.0%
!!! ACCTCTAAAGTAAAAAATAT+AGG + chr3.1:50242334-50242353 None:intergenic 20.0%
!!! AGTATTATTTTGATTCACAA+AGG + chr3.1:50243082-50243101 None:intergenic 20.0%
!!! CTTCTGAAGAAAAAAAAAAT+TGG - chr3.1:50242600-50242619 MS.gene41582:intron 20.0%
!!! GTATTATTTTGATTCACAAA+GGG + chr3.1:50243081-50243100 None:intergenic 20.0%
!!! GTTAAAAATTTGTTGGTTTA+AGG + chr3.1:50244696-50244715 None:intergenic 20.0%
!!! TCCTATATTTTTTACTTTAG+AGG - chr3.1:50242330-50242349 MS.gene41582:intron 20.0%
!!! TTGAAAATGATTTTTGGTTA+GGG + chr3.1:50244545-50244564 None:intergenic 20.0%
!!! TTTCAGGAAAATTTAGATTT+TGG - chr3.1:50243570-50243589 MS.gene41582:CDS 20.0%
!!! TTTTTTTTTTCTTCAGAAGA+TGG + chr3.1:50242599-50242618 None:intergenic 20.0%
! ATAGAGAAAGAATACAAGAA+GGG + chr3.1:50241595-50241614 None:intergenic 25.0%
! ATTGCTTGTATTATGAATGA+TGG + chr3.1:50244511-50244530 None:intergenic 25.0%
! CTTCTTTGAATACATTACAA+GGG + chr3.1:50241715-50241734 None:intergenic 25.0%
! GATTATGATACTTTACCTAA+AGG - chr3.1:50243312-50243331 MS.gene41582:CDS 25.0%
! TAAAACAGAAATTAGGGATA+AGG + chr3.1:50244036-50244055 None:intergenic 25.0%
! TTACACACAAAATTGTCAAT+CGG + chr3.1:50243910-50243929 None:intergenic 25.0%
! TTGCTTGTATTATGAATGAT+GGG + chr3.1:50244510-50244529 None:intergenic 25.0%
!! AATTAAAGTGGATTTGGATA+TGG - chr3.1:50243792-50243811 MS.gene41582:CDS 25.0%
!! TAAAACAACTTTTGCATCTA+TGG + chr3.1:50243355-50243374 None:intergenic 25.0%
!! TAATTTCTCCTTGTTCTTTT+CGG + chr3.1:50244311-50244330 None:intergenic 25.0%
!! TGTGAATATCTTGTTTGTTT+GGG + chr3.1:50244245-50244264 None:intergenic 25.0%
!! TGTTGAAATTAAAGTGGATT+TGG - chr3.1:50243786-50243805 MS.gene41582:CDS 25.0%
!! TTGTGAATATCTTGTTTGTT+TGG + chr3.1:50244246-50244265 None:intergenic 25.0%
!!! AAACTTTTTTTCTTCTCTCT+TGG - chr3.1:50242103-50242122 MS.gene41582:intron 25.0%
!!! AACTTTTTTTCTTCTCTCTT+GGG - chr3.1:50242104-50242123 MS.gene41582:intron 25.0%
!!! ACAATGCTAAATGTTTTAGT+TGG - chr3.1:50243270-50243289 MS.gene41582:CDS 25.0%
!!! AGACATAATGAAAGTATTAG+AGG - chr3.1:50244211-50244230 MS.gene41582:intron 25.0%
!!! CTTGAAAATGATTTTTGGTT+AGG + chr3.1:50244546-50244565 None:intergenic 25.0%
AAGGAGAAATTAGATTGATG+GGG - chr3.1:50244319-50244338 MS.gene41582:intron 30.0%
AATATGAGAAAGCAATCCTA+AGG - chr3.1:50241525-50241544 MS.gene41582:CDS 30.0%
AATTGTTTGAAGATCATCCA+AGG + chr3.1:50245041-50245060 None:intergenic 30.0%
ACAAGGAGAAATTAGATTGA+TGG - chr3.1:50244317-50244336 MS.gene41582:intron 30.0%
ACTTAAAATTCACTCGTGAT+TGG - chr3.1:50243874-50243893 MS.gene41582:CDS 30.0%
AGTAAGATTCAAAGACTCAA+CGG - chr3.1:50243978-50243997 MS.gene41582:intron 30.0%
AGTCTCTTTAATCAGCTTAA+CGG + chr3.1:50243415-50243434 None:intergenic 30.0%
AGTTGTACAATAATCCAAAG+AGG + chr3.1:50244109-50244128 None:intergenic 30.0%
ATTGTGTGAGTATTTGGTAA+AGG - chr3.1:50244753-50244772 MS.gene41582:intron 30.0%
CAAATACTCACACAATTCAT+AGG + chr3.1:50244749-50244768 None:intergenic 30.0%
CAAGGAGAAATTAGATTGAT+GGG - chr3.1:50244318-50244337 MS.gene41582:intron 30.0%
CACAAACTCAATAAACTCTT+TGG - chr3.1:50243464-50243483 MS.gene41582:CDS 30.0%
CACAGAAATTGCAAAACATT+TGG - chr3.1:50242780-50242799 MS.gene41582:intron 30.0%
CTATGAATTGTGTGAGTATT+TGG - chr3.1:50244747-50244766 MS.gene41582:intron 30.0%
GAGGGTTGAGAATATAAATA+TGG + chr3.1:50244868-50244887 None:intergenic 30.0%
GATAGAGAAAGAATACAAGA+AGG + chr3.1:50241596-50241615 None:intergenic 30.0%
GCTTCTTTGAATACATTACA+AGG + chr3.1:50241716-50241735 None:intergenic 30.0%
GGTATGAAATTGAAGCTTTA+AGG - chr3.1:50243757-50243776 MS.gene41582:CDS 30.0%
TAAGGATAAAAGTTACCCTT+TGG - chr3.1:50242822-50242841 MS.gene41582:intron 30.0%
TACACACAAAATTGTCAATC+GGG + chr3.1:50243909-50243928 None:intergenic 30.0%
TAGAGAAAGAATACAAGAAG+GGG + chr3.1:50241594-50241613 None:intergenic 30.0%
TCAATTTCATACCTGAACAT+AGG + chr3.1:50243750-50243769 None:intergenic 30.0%
TGAGAAAATACATGTATCGA+TGG + chr3.1:50243646-50243665 None:intergenic 30.0%
TTACTTCAACACTTCTACAT+TGG - chr3.1:50242019-50242038 MS.gene41582:intron 30.0%
! AAAGGGTAACTTTTATCCTT+AGG + chr3.1:50242823-50242842 None:intergenic 30.0%
! CAGGAAAATTTAGATTTTGG+AGG - chr3.1:50243573-50243592 MS.gene41582:CDS 30.0%
! CCTCTCTTGAAAATGATTTT+TGG + chr3.1:50244551-50244570 None:intergenic 30.0%
! GTTTTTGCAATGTTATAGCT+GGG - chr3.1:50244355-50244374 MS.gene41582:intron 30.0%
! TAACTTTTATCCTTAGGAGA+AGG + chr3.1:50242817-50242836 None:intergenic 30.0%
! TCATGATCATCAAGTTTGTT+AGG + chr3.1:50243672-50243691 None:intergenic 30.0%
! TTTTACTATTATCCTCTAGC+AGG - chr3.1:50241752-50241771 MS.gene41582:intron 30.0%
! TTTTGTGTGTAAAATCCGAT+TGG - chr3.1:50243918-50243937 MS.gene41582:CDS 30.0%
!! AAATATGGAAGCATCTAGTA+GGG + chr3.1:50244853-50244872 None:intergenic 30.0%
!! ACTTTACCTAAAGGGTATTA+TGG - chr3.1:50243321-50243340 MS.gene41582:CDS 30.0%
!! CCAAAAATCATTTTCAAGAG+AGG - chr3.1:50244548-50244567 MS.gene41582:intron 30.0%
!! TAAATATGGAAGCATCTAGT+AGG + chr3.1:50244854-50244873 None:intergenic 30.0%
!! TTCTGAAGTTACAATCCAAT+CGG + chr3.1:50243936-50243955 None:intergenic 30.0%
!!! TTCTTGTTTGCTTGTTTTGT+AGG - chr3.1:50242625-50242644 MS.gene41582:intron 30.0%
AAAACTAGTATACCTGCTAG+AGG + chr3.1:50241767-50241786 None:intergenic 35.0%
AAATTCAGTACCGTTGGTAT+TGG + chr3.1:50242692-50242711 None:intergenic 35.0%
ACTTATCAGCATAGTTCACA+AGG + chr3.1:50244988-50245007 None:intergenic 35.0%
AGCAATCCTAAGGATTGAAA+AGG - chr3.1:50241535-50241554 MS.gene41582:CDS 35.0%
ATCGGTATACATGAACAGTT+TGG + chr3.1:50241655-50241674 None:intergenic 35.0%
ATGGTGACAAAGTTTCTTTG+TGG - chr3.1:50242850-50242869 MS.gene41582:CDS 35.0%
CAGGTAATGAAGAGAAGAAA+GGG + chr3.1:50242749-50242768 None:intergenic 35.0%
CTATCAACACTTGACAACAA+AGG - chr3.1:50241611-50241630 MS.gene41582:CDS 35.0%
CTCGTATGAGTGTTATATAC+AGG + chr3.1:50242054-50242073 None:intergenic 35.0%
GAATTGCCATAATACCCTTT+AGG + chr3.1:50243330-50243349 None:intergenic 35.0%
GCATAAAGAGCAATTGTCTT+CGG + chr3.1:50243854-50243873 None:intergenic 35.0%
GGGATAAGGTACAAATGAAA+TGG + chr3.1:50244022-50244041 None:intergenic 35.0%
TCGGTATACATGAACAGTTT+GGG + chr3.1:50241654-50241673 None:intergenic 35.0%
TCTTGATATTCCTTCTCCTA+AGG - chr3.1:50242804-50242823 MS.gene41582:intron 35.0%
TGAGTGTTATATACAGGTGT+CGG + chr3.1:50242048-50242067 None:intergenic 35.0%
TGATGATCATGATCCATCAA+TGG - chr3.1:50243680-50243699 MS.gene41582:CDS 35.0%
TGGGAAAGAGAAAAACAAGT+TGG - chr3.1:50242994-50243013 MS.gene41582:CDS 35.0%
TTGTCACCATTAACACCAAA+GGG + chr3.1:50242840-50242859 None:intergenic 35.0%
TTGTGAACTATGCTGATAAG+TGG - chr3.1:50244987-50245006 MS.gene41582:CDS 35.0%
TTTCTGTGTTAGTATTGTCC+AGG + chr3.1:50242768-50242787 None:intergenic 35.0%
TTTGGTAAAGGTTGCACAAT+TGG - chr3.1:50244765-50244784 MS.gene41582:intron 35.0%
TTTGTCACCATTAACACCAA+AGG + chr3.1:50242841-50242860 None:intergenic 35.0%
! AATACCAACGGTACTGAATT+TGG - chr3.1:50242691-50242710 MS.gene41582:intron 35.0%
! ATACCAACGGTACTGAATTT+GGG - chr3.1:50242692-50242711 MS.gene41582:intron 35.0%
! ATGTCACATGCTATTTGTGA+CGG - chr3.1:50242895-50242914 MS.gene41582:CDS 35.0%
! CATCTTCCTTTTCAATCCTT+AGG + chr3.1:50241544-50241563 None:intergenic 35.0%
! CATGAATTGCTGATGATGAT+CGG + chr3.1:50241673-50241692 None:intergenic 35.0%
! GAAAATACATGTATCGATGG+TGG + chr3.1:50243643-50243662 None:intergenic 35.0%
! GGTTTTTGCAATGTTATAGC+TGG - chr3.1:50244354-50244373 MS.gene41582:intron 35.0%
! GTAACAGATTTTCTGTCCAT+GGG + chr3.1:50243051-50243070 None:intergenic 35.0%
! GTCATTGCTGCTAAGTTTTA+AGG + chr3.1:50243247-50243266 None:intergenic 35.0%
! TAAAGTGGATTTGGATATGG+TGG - chr3.1:50243795-50243814 MS.gene41582:CDS 35.0%
! TGTAACAGATTTTCTGTCCA+TGG + chr3.1:50243052-50243071 None:intergenic 35.0%
! TTGACTTCCTTCTAAAGAGT+CGG - chr3.1:50244720-50244739 MS.gene41582:intron 35.0%
!! AAGTTACCCTTTGGTGTTAA+TGG - chr3.1:50242831-50242850 MS.gene41582:intron 35.0%
!! TGAATTTGGGGTTCCATTTT+TGG - chr3.1:50242705-50242724 MS.gene41582:intron 35.0%
AAAAGGCTAGAGGTTAAGGT+AGG + chr3.1:50244893-50244912 None:intergenic 40.0%
AAGTGCTTGCAGTTTATGTG+TGG - chr3.1:50243205-50243224 MS.gene41582:CDS 40.0%
AATCCAACCAACAACAAGAG+AGG - chr3.1:50244265-50244284 MS.gene41582:intron 40.0%
AGAAAGAATACAAGAAGGGG+TGG + chr3.1:50241591-50241610 None:intergenic 40.0%
AGAGTCAATGCCAATACCAA+CGG - chr3.1:50242679-50242698 MS.gene41582:intron 40.0%
AGCTTAACGGTTTCATAGAG+TGG + chr3.1:50243402-50243421 None:intergenic 40.0%
ATGAAGCATAGACTCCAACA+CGG + chr3.1:50242391-50242410 None:intergenic 40.0%
CCAGGTAATGAAGAGAAGAA+AGG + chr3.1:50242750-50242769 None:intergenic 40.0%
CCTTTCTTCTCTTCATTACC+TGG - chr3.1:50242747-50242766 MS.gene41582:intron 40.0%
CTAACGGAGTGGAAACATTT+GGG - chr3.1:50243546-50243565 MS.gene41582:CDS 40.0%
CTGATAAGTGGCAGAATCTA+AGG - chr3.1:50244999-50245018 MS.gene41582:CDS 40.0%
CTTTGTGGTGGTTTCACAAT+TGG - chr3.1:50242865-50242884 MS.gene41582:CDS 40.0%
GACCAAATCCGAAAAGAACA+AGG - chr3.1:50244300-50244319 MS.gene41582:intron 40.0%
GAGAAATTAGATTGATGGGG+TGG - chr3.1:50244322-50244341 MS.gene41582:intron 40.0%
GATCATGATCCATCAATGGA+TGG - chr3.1:50243684-50243703 MS.gene41582:CDS 40.0%
GGTGGTTTCACAATTGGAAT+GGG - chr3.1:50242871-50242890 MS.gene41582:CDS 40.0%
GTGACAAAGTTTCTTTGTGG+TGG - chr3.1:50242853-50242872 MS.gene41582:CDS 40.0%
GTGGTTTCACAATTGGAATG+GGG - chr3.1:50242872-50242891 MS.gene41582:CDS 40.0%
TAACCTTGCATACCCCTTAT+AGG + chr3.1:50244916-50244935 None:intergenic 40.0%
TAGGAAAAGGCTAGAGGTTA+AGG + chr3.1:50244897-50244916 None:intergenic 40.0%
TCTAACGGAGTGGAAACATT+TGG - chr3.1:50243545-50243564 MS.gene41582:CDS 40.0%
TGCATACCCCTTATAGGAAA+AGG + chr3.1:50244910-50244929 None:intergenic 40.0%
TGGTATCAGACGAAACTTGA+CGG - chr3.1:50243290-50243309 MS.gene41582:CDS 40.0%
TGGTGGTTTCACAATTGGAA+TGG - chr3.1:50242870-50242889 MS.gene41582:CDS 40.0%
TTAGATTGATGGGGTGGTTT+CGG - chr3.1:50244328-50244347 MS.gene41582:intron 40.0%
TTGGCAGTTGCTTCCAAAAA+TGG + chr3.1:50242721-50242740 None:intergenic 40.0%
! AAGAGAAGAAAGGGTGCAAT+TGG + chr3.1:50242740-50242759 None:intergenic 40.0%
! CTCCTTGTTCTTTTCGGATT+TGG + chr3.1:50244305-50244324 None:intergenic 40.0%
! TACCAACGGTACTGAATTTG+GGG - chr3.1:50242693-50242712 MS.gene41582:intron 40.0%
! TGACTTCCTTCTAAAGAGTC+GGG - chr3.1:50244721-50244740 MS.gene41582:intron 40.0%
! TGATAAGCCTCTCTTGTTGT+TGG + chr3.1:50244275-50244294 None:intergenic 40.0%
! TGCAACACGTCTAGTTTAAG+AGG + chr3.1:50241902-50241921 None:intergenic 40.0%
! TGTTTTTCTCTTTCCCACAC+AGG + chr3.1:50242991-50243010 None:intergenic 40.0%
! TTTCCTATAAGGGGTATGCA+AGG - chr3.1:50244910-50244929 MS.gene41582:CDS 40.0%
!! ACCTCTAGCCTTTTCCTATA+AGG - chr3.1:50244899-50244918 MS.gene41582:CDS 40.0%
!! CATGCTATTTGTGACGGATT+TGG - chr3.1:50242901-50242920 MS.gene41582:CDS 40.0%
!! CCTCTAGCCTTTTCCTATAA+GGG - chr3.1:50244900-50244919 MS.gene41582:CDS 40.0%
!! CTCTAGCCTTTTCCTATAAG+GGG - chr3.1:50244901-50244920 MS.gene41582:CDS 40.0%
!! GTGGAAACATTTGGGTTTTC+AGG - chr3.1:50243554-50243573 MS.gene41582:CDS 40.0%
!! TGATGGGTGACTTCTTTTGT+CGG + chr3.1:50244494-50244513 None:intergenic 40.0%
AACATAGGCATAGCAGCAAC+AGG + chr3.1:50243735-50243754 None:intergenic 45.0%
AACCCCAAATTCAGTACCGT+TGG + chr3.1:50242698-50242717 None:intergenic 45.0%
ACATAGGCATAGCAGCAACA+GGG + chr3.1:50243734-50243753 None:intergenic 45.0%
ACCATTTCCACAATGTCCCA+TGG - chr3.1:50243032-50243051 MS.gene41582:CDS 45.0%
ACGTGTCGTATGAGTGTCAT+AGG + chr3.1:50241954-50241973 None:intergenic 45.0%
AGACTAGCGAGACATGCTAA+TGG - chr3.1:50242649-50242668 MS.gene41582:intron 45.0%
AGCATGGAATTGGAAGCTAG+TGG - chr3.1:50243510-50243529 MS.gene41582:CDS 45.0%
CAATTGCGCAATCATCTCCT+GGG + chr3.1:50244806-50244825 None:intergenic 45.0%
CATCAATGGATGGAGGAGTT+AGG - chr3.1:50243694-50243713 MS.gene41582:CDS 45.0%
CATGATCCATCAATGGATGG+AGG - chr3.1:50243687-50243706 MS.gene41582:CDS 45.0%
CCCTTATAGGAAAAGGCTAG+AGG + chr3.1:50244903-50244922 None:intergenic 45.0%
CTAACTCCTCCATCCATTGA+TGG + chr3.1:50243696-50243715 None:intergenic 45.0%
GCAGTTGTTGAACTTGCAAG+TGG - chr3.1:50242943-50242962 MS.gene41582:CDS 45.0%
GGATGGTTTGAGCATGGAAT+TGG - chr3.1:50243500-50243519 MS.gene41582:CDS 45.0%
TAGAGGTTAAGGTAGGAGGA+GGG + chr3.1:50244886-50244905 None:intergenic 45.0%
TAGGTACCCGACTCTTTAGA+AGG + chr3.1:50244730-50244749 None:intergenic 45.0%
TCAAGAGGATGGTTTGAGCA+TGG - chr3.1:50243494-50243513 MS.gene41582:CDS 45.0%
TCCATGGGACATTGTGGAAA+TGG + chr3.1:50243036-50243055 None:intergenic 45.0%
TGCTTGCAGTTTATGTGTGG+AGG - chr3.1:50243208-50243227 MS.gene41582:CDS 45.0%
TTGCTGCTATGCCTATGTTC+AGG - chr3.1:50243736-50243755 MS.gene41582:CDS 45.0%
TTGGAGACGAATCAAGAGGA+TGG - chr3.1:50243483-50243502 MS.gene41582:CDS 45.0%
TTTCTGTCCATGGGACATTG+TGG + chr3.1:50243042-50243061 None:intergenic 45.0%
! CTCTTTGGAGACGAATCAAG+AGG - chr3.1:50243479-50243498 MS.gene41582:CDS 45.0%
!! AAGAGGTGTCTGTGCTTCAT+AGG + chr3.1:50241885-50241904 None:intergenic 45.0%
!! AAGCCTCTCTTGTTGTTGGT+TGG + chr3.1:50244271-50244290 None:intergenic 45.0%
!! ATTCAAAGAAGCGCTGTCGA+AGG - chr3.1:50241724-50241743 MS.gene41582:intron 45.0%
!! CAAGAAGGGGTGGATTTTGA+TGG + chr3.1:50241581-50241600 None:intergenic 45.0%
!! GCAGTTGGTGAATAGAACCT+TGG - chr3.1:50245021-50245040 MS.gene41582:CDS 45.0%
!! ATATATTAATATTTATATAG+CGG - chr3.1:50242299-50242318 MS.gene41582:intron 5.0%
AGCCATCAGTGAAACCTGTG+TGG - chr3.1:50242974-50242993 MS.gene41582:CDS 50.0%
AGGCTAGAGGTTAAGGTAGG+AGG + chr3.1:50244890-50244909 None:intergenic 50.0%
ATGGTGGCAAGCATCTTGCA+TGG + chr3.1:50243627-50243646 None:intergenic 50.0%
CTAGAGGTTAAGGTAGGAGG+AGG + chr3.1:50244887-50244906 None:intergenic 50.0%
GCAATTGCGCAATCATCTCC+TGG + chr3.1:50244807-50244826 None:intergenic 50.0%
GCCATCAGTGAAACCTGTGT+GGG - chr3.1:50242975-50242994 MS.gene41582:CDS 50.0%
GCTAGTGGAAGCAAGACATC+AGG - chr3.1:50244955-50244974 MS.gene41582:CDS 50.0%
GGAGCTTCTAAATTCGTCCC+AGG - chr3.1:50244786-50244805 MS.gene41582:intron 50.0%
GTCTGTGTCAGTATCGTGTC+AGG - chr3.1:50242362-50242381 MS.gene41582:intron 50.0%
GTGGATTTGGATATGGTGGC+CGG - chr3.1:50243799-50243818 MS.gene41582:CDS 50.0%
TCCCACACAGGTTTCACTGA+TGG + chr3.1:50242979-50242998 None:intergenic 50.0%
! GTCTTGCTTCCACTAGCTCT+TGG + chr3.1:50244952-50244971 None:intergenic 50.0%
! GTGGCAGAATCTAAGGCAGT+TGG - chr3.1:50245006-50245025 MS.gene41582:CDS 50.0%
! TGGTGCAGCAACGGTTCTAA+CGG - chr3.1:50243530-50243549 MS.gene41582:CDS 50.0%
! TTGCTTCCACTAGCTCTTGG+AGG + chr3.1:50244949-50244968 None:intergenic 50.0%
!! GCAGTGGGCTGTTAAGTCTT+TGG - chr3.1:50243823-50243842 MS.gene41582:CDS 50.0%
ATCGTGTCAGGCATCCGTGT+TGG - chr3.1:50242374-50242393 MS.gene41582:intron 55.0%
GACTTAACAGCCCACTGCAC+CGG + chr3.1:50243821-50243840 None:intergenic 55.0%
GCAAGCATCTTGCATGGTGC+AGG + chr3.1:50243621-50243640 None:intergenic 55.0%
GGAAGCTAGTGGTGCAGCAA+CGG - chr3.1:50243521-50243540 MS.gene41582:CDS 55.0%
TGACAGCCTCCAAGAGCTAG+TGG - chr3.1:50244940-50244959 MS.gene41582:CDS 55.0%
! CAGCAACGGTTCTAACGGAG+TGG - chr3.1:50243535-50243554 MS.gene41582:CDS 55.0%
GATATGGTGGCCGGTGCAGT+GGG - chr3.1:50243808-50243827 MS.gene41582:CDS 60.0%
TGTCGAACACCGACGCGTGT+CGG + chr3.1:50241929-50241948 None:intergenic 60.0%
TTGATGGGGTGGTTTCGGCG+AGG - chr3.1:50244333-50244352 MS.gene41582:intron 60.0%
TTGCAGTGTCCGACACGCGT+CGG - chr3.1:50241917-50241936 MS.gene41582:intron 60.0%
GGATATGGTGGCCGGTGCAG+TGG - chr3.1:50243807-50243826 MS.gene41582:CDS 65.0%


Chromosome Type Strat End Strand Name
chr3.1 gene 50241521 50245075 50241521 ID=MS.gene41582
chr3.1 mRNA 50241521 50245075 50241521 ID=MS.gene41582.t1;Parent=MS.gene41582
chr3.1 exon 50244823 50245075 50244823 ID=MS.gene41582.t1.exon1;Parent=MS.gene41582.t1
chr3.1 CDS 50244823 50245075 50244823 ID=cds.MS.gene41582.t1;Parent=MS.gene41582.t1
chr3.1 exon 50242839 50243949 50242839 ID=MS.gene41582.t1.exon2;Parent=MS.gene41582.t1
chr3.1 CDS 50242839 50243949 50242839 ID=cds.MS.gene41582.t1;Parent=MS.gene41582.t1
chr3.1 exon 50241521 50241650 50241521 ID=MS.gene41582.t1.exon3;Parent=MS.gene41582.t1
chr3.1 CDS 50241521 50241650 50241521 ID=cds.MS.gene41582.t1;Parent=MS.gene41582.t1
Gene Sequence

>MS.gene41582

ATGGAATATGAGAAAGCAATCCTAAGGATTGAAAAGGAAGATGTTTTGCTTGTAAAGCCATCAAAATCCACCCCTTCTTGTATTCTTTCTCTATCAACACTTGACAACAAAGGTGTCAATAATAACATTGCCCAAACTGTTCATGTATACCGATCATCATCAGCAATTCATGATTATGATTCTAGTTTCAACCCTTGTAATGTATTCAAAGAAGCGCTGTCGAAGGCTTTGTTTTACTATTATCCTCTAGCAGGTATACTAGTTTTTTTTCTTTAAGAACAACCGATAGTAATTATTAGTCTTTTACCATAAAATAAACTTCATTTAAGAAGAGTACAATCAATTTGTCTATGAGATGTAACCTATGAAGCACAGACACCTCTTAAACTAGACGTGTTGCAGTGTCCGACACGCGTCGGTGTTCGACAGTCCTATGACACTCATACGACACGTGTCGAACAACTAATATTGTGTCCTAAATAAAACTATTTTTTTTCTTTACTTCAACACTTCTACATTGGTGTCCGACACCTGTATATAACACTCATACGAGTTGTGTCTGACAACTCAGACAAATATCTAAAACTTTTTTTCTTCTCTCTTGGGAGTTATAGAAATTAAAGTTAATTACAATATTTTTACCTTTTTTTTGATAGTAGATTAATAAATAAAGGTCATATATTATGGTATCTTCTTTTAGAACTTTTTTCAAAGAAATAAATTGCTTAAGTTAGATGCTTATGTATGTGTTTTGATTTTCATTTTAGACTGTCTATAAATATATTAATATTTATATAGCGGTGCCATTGTCCTATATTTTTTACTTTAGAGGTGTCGATTTGTCTGTGTCAGTATCGTGTCAGGCATCCGTGTTGGAGTCTATGCTTCATAGAATGTAACAAAAGAAAAGTTTAACTATGAGTTGAAACATTTTTCATCTATATTTTTAAAGTCAACACGCTATCAACACACATAGAAATTTCAGTAGCGAAAAGTCCTAACAAACAATTTTTTTTCACATACGGCTAATAGTCAAGAATAATGAAAGATTCACAAACATTAATTGCATTTGCATCCATCTTCTGAAGAAAAAAAAAATTGGTTTTCTTGTTTGCTTGTTTTGTAGGTAGACTAGCGAGACATGCTAATGGAAAATTTAGAGTCAATGCCAATACCAACGGTACTGAATTTGGGGTTCCATTTTTGGAAGCAACTGCCAATTGCACCCTTTCTTCTCTTCATTACCTGGACAATACTAACACAGAAATTGCAAAACATTTGGTTCTTGATATTCCTTCTCCTAAGGATAAAAGTTACCCTTTGGTGTTAATGGTGACAAAGTTTCTTTGTGGTGGTTTCACAATTGGAATGGGGATGTCACATGCTATTTGTGACGGATTTGGTGCATCGCAATTCTTCAAAGCAGTTGTTGAACTTGCAAGTGGAAGAACTGAGCCATCAGTGAAACCTGTGTGGGAAAGAGAAAAACAAGTTGGAACAATAACTACACAACCATTTCCACAATGTCCCATGGACAGAAAATCTGTTACATTTTCACCCTTTGTGAATCAAAATAATACTATGATTATTAAACAATATTGTTTTAAAGTAAAGGGTGAAATGATAACAAGACTTAAGATGAGTTTGATGAATGAAAATGAAAACATAAGGTTCACAACTTTTGAAGTGCTTGCAGTTTATGTGTGGAGGTCAAGATCAAGAGCCTTAAAACTTAGCAGCAATGACAAAACAATGCTAAATGTTTTAGTTGGTATCAGACGAAACTTGACGGATTATGATACTTTACCTAAAGGGTATTATGGCAATTCTACCATAGATGCAAAAGTTGTTTTAAAAGTGAGTGAGCTCGACGAAATGCCACTCTATGAAACCGTTAAGCTGATTAAAGAGACTAAAAATATTGCTTTCACTGCTGATTATGTCACAAACTCAATAAACTCTTTGGAGACGAATCAAGAGGATGGTTTGAGCATGGAATTGGAAGCTAGTGGTGCAGCAACGGTTCTAACGGAGTGGAAACATTTGGGTTTTCAGGAAAATTTAGATTTTGGAGGCTATGAATTAGTGAATTTTCTACCTGCACCATGCAAGATGCTTGCCACCATCGATACATGTATTTTCTCATCTCCTAACAAACTTGATGATCATGATCCATCAATGGATGGAGGAGTTAGGATATTTACATCACTCCCTGTTGCTGCTATGCCTATGTTCAGGTATGAAATTGAAGCTTTAAGGTTTATTTGTTGAAATTAAAGTGGATTTGGATATGGTGGCCGGTGCAGTGGGCTGTTAAGTCTTTGGATTAACCGAAGACAATTGCTCTTTATGCACTTAAAATTCACTCGTGATTGGATCGTAACTCCCGATTGACAATTTTGTGTGTAAAATCCGATTGGATTGTAACTTCAGAAGCAATTGTCTTAACTGAATGCAAGTAAGATTCAAAGACTCAACGGATCGAATTTCATTCTTTTCCATTTCATTTGTACCTTATCCCTAATTTCTGTTTTATAGTATTGTCATGACTTGTCATCATTAATTGTTTTTTTACTTATATATATCCTCTTTGGATTATTGTACAACTGTGTTATTTTTATCATGAAATGTTATAAGGAAGATTCTATTTGTAGCCTCGATACATTATTTCATTAAACAACAAGGATTATAGACATAATGAAAGTATTAGAGGTATTCTAGCCCAAACAAACAAGATATTCACAAATCCAACCAACAACAAGAGAGGCTTATCAATCAAGACCAAATCCGAAAAGAACAAGGAGAAATTAGATTGATGGGGTGGTTTCGGCGAGGTTTTTGCAATGTTATAGCTGGGTTGAATACTACTTGTACTTATTGTCGCTTGAATAACTAAATTTTTGTTTGATGTCAAAAAACAAATCGCCAATTCTTAGAGAGATTTTTTTTTTAATGGAATTCTTAGAGAGACCGACAAAAGAAGTCACCCATCATTCATAATACAAGCAATTCACACATTCTCCCTAACCAAAAATCATTTTCAAGAGAGGAGCTTGATAGTTTGAAAAATTAGAGTAACTAATTTGCAATTTTTTAAAAATTTATGTGGACGGATTTGCAGTTTTGTAATATTTGTAGTTTATAATGTGTAAAAGGCACTTCATCATCTTTTCCTTAAACCAACAAATTTTTAACAACATTGACTTCCTTCTAAAGAGTCGGGTACCTATGAATTGTGTGAGTATTTGGTAAAGGTTGCACAATTGGAGCTTCTAAATTCGTCCCAGGAGATGATTGCGCAATTGCATTAGCTGCTATTATATTCTCAACCCTACTAGATGCTTCCATATTTATATTCTCAACCCTCCTCCTACCTTAACCTCTAGCCTTTTCCTATAAGGGGTATGCAAGGTTATTTTTGACAGCCTCCAAGAGCTAGTGGAAGCAAGACATCAGGCTATTCACCTTGTGAACTATGCTGATAAGTGGCAGAATCTAAGGCAGTTGGTGAATAGAACCTTGGATGATCTTCAAACAATTGCTATAGCTTCTTAG
Protein sequence

>MS.gene41582.t1

MEYEKAILRIEKEDVLLVKPSKSTPSCILSLSTLDNKGVNNNIAQTVHVYRSSSAIHDYDSSFNPCNVFKEALSKALFYYYPLAGRLARHANGKFRVNANTNGTEFGVPFLEATANCTLSSLHYLDNTNTEIAKHLVLDIPSPKDKSYPLVLMVTKFLCGGFTIGMGMSHAICDGFGASQFFKAVVELASGRTEPSVKPVWEREKQVGTITTQPFPQCPMDRKSVTFSPFVNQNNTMIIKQYCFKVKGEMITRLKMSLMNENENIRFTTFEVLAVYVWRSRSRALKLSSNDKTMLNVLVGIRRNLTDYDTLPKGYYGNSTIDAKVVLKVSELDEMPLYETVKLIKETKNIAFTADYVTNSINSLETNQEDGLSMELEASGAATVLTEWKHLGFQENLDFGGYELVNFLPAPCKMLATIDTCIFSSPNKLDDHDPSMDGGVRIFTSLPVAAMPMFSLQELVEARHQAIHLVNYADKWQNLRQLVNRTLDDLQTIAIAS