Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene78121.t1 | XP_003606244.1 | 93.3 | 465 | 24 | 2 | 1 | 458 | 1 | 465 | 1.20E-249 | 872.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene78121.t1 | Q8GYW8 | 42.7 | 468 | 250 | 8 | 1 | 457 | 1 | 461 | 8.7e-97 | 355.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene78121.t1 | G7JKY1 | 93.3 | 465 | 24 | 2 | 1 | 458 | 1 | 465 | 8.3e-250 | 872.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene78121.t1 | MTR_4g055170 | 93.333 | 465 | 24 | 2 | 1 | 458 | 1 | 465 | 0.0 | 879 |
MS.gene78121.t1 | MTR_3g465980 | 50.862 | 464 | 203 | 11 | 6 | 451 | 4 | 460 | 4.23e-154 | 445 |
MS.gene78121.t1 | MTR_3g465880 | 52.700 | 463 | 195 | 11 | 10 | 451 | 8 | 467 | 1.56e-153 | 444 |
MS.gene78121.t1 | MTR_3g465990 | 49.784 | 464 | 208 | 11 | 6 | 451 | 4 | 460 | 3.67e-152 | 441 |
MS.gene78121.t1 | MTR_3g465910 | 50.000 | 460 | 200 | 12 | 10 | 448 | 8 | 458 | 6.25e-145 | 425 |
MS.gene78121.t1 | MTR_3g465930 | 48.922 | 464 | 208 | 11 | 10 | 451 | 8 | 464 | 1.71e-144 | 421 |
MS.gene78121.t1 | MTR_6g053810 | 46.352 | 466 | 225 | 10 | 5 | 450 | 4 | 464 | 1.54e-132 | 390 |
MS.gene78121.t1 | MTR_3g465950 | 48.655 | 446 | 196 | 12 | 10 | 436 | 8 | 439 | 1.27e-129 | 383 |
MS.gene78121.t1 | MTR_3g465870 | 44.017 | 468 | 202 | 11 | 1 | 451 | 1 | 425 | 1.32e-115 | 346 |
MS.gene78121.t1 | MTR_2g015430 | 33.190 | 464 | 255 | 18 | 12 | 448 | 2 | 437 | 1.25e-68 | 226 |
MS.gene78121.t1 | MTR_3g098980 | 32.339 | 436 | 260 | 14 | 18 | 443 | 20 | 430 | 4.68e-57 | 195 |
MS.gene78121.t1 | MTR_7g027175 | 32.166 | 457 | 271 | 15 | 2 | 446 | 7 | 436 | 9.59e-57 | 194 |
MS.gene78121.t1 | MTR_8g096530 | 30.937 | 459 | 283 | 12 | 10 | 458 | 5 | 439 | 5.08e-55 | 189 |
MS.gene78121.t1 | MTR_1g081660 | 29.565 | 460 | 289 | 12 | 1 | 446 | 7 | 445 | 9.50e-54 | 186 |
MS.gene78121.t1 | MTR_1g040215 | 28.833 | 437 | 285 | 9 | 20 | 446 | 17 | 437 | 1.37e-50 | 178 |
MS.gene78121.t1 | MTR_1g053315 | 29.978 | 447 | 277 | 17 | 20 | 445 | 26 | 457 | 1.21e-49 | 176 |
MS.gene78121.t1 | MTR_7g110610 | 32.258 | 403 | 198 | 15 | 7 | 400 | 2 | 338 | 1.90e-49 | 173 |
MS.gene78121.t1 | MTR_5g076700 | 28.507 | 442 | 283 | 12 | 19 | 446 | 17 | 439 | 4.51e-49 | 174 |
MS.gene78121.t1 | MTR_3g071320 | 29.956 | 454 | 279 | 16 | 11 | 449 | 4 | 433 | 1.91e-48 | 172 |
MS.gene78121.t1 | MTR_1g040175 | 29.825 | 399 | 255 | 9 | 7 | 395 | 4 | 387 | 2.04e-48 | 172 |
MS.gene78121.t1 | MTR_7g114550 | 29.517 | 393 | 241 | 11 | 19 | 395 | 17 | 389 | 8.80e-45 | 162 |
MS.gene78121.t1 | MTR_1g040195 | 27.009 | 448 | 282 | 8 | 6 | 446 | 3 | 412 | 1.21e-44 | 162 |
MS.gene78121.t1 | MTR_7g114520 | 29.490 | 451 | 268 | 15 | 19 | 446 | 18 | 441 | 1.28e-44 | 162 |
MS.gene78121.t1 | MTR_7g114490 | 29.771 | 393 | 240 | 11 | 19 | 395 | 17 | 389 | 1.94e-43 | 160 |
MS.gene78121.t1 | MTR_7g114560 | 29.517 | 393 | 241 | 13 | 19 | 395 | 17 | 389 | 2.15e-43 | 159 |
MS.gene78121.t1 | MTR_7g114470 | 27.640 | 445 | 284 | 13 | 19 | 446 | 18 | 441 | 9.83e-43 | 157 |
MS.gene78121.t1 | MTR_3g112180 | 27.332 | 461 | 264 | 17 | 15 | 446 | 15 | 433 | 8.55e-42 | 154 |
MS.gene78121.t1 | MTR_8g075610 | 28.668 | 443 | 270 | 15 | 19 | 443 | 1 | 415 | 2.17e-41 | 152 |
MS.gene78121.t1 | MTR_1g040320 | 29.047 | 451 | 258 | 12 | 6 | 446 | 3 | 401 | 4.44e-41 | 152 |
MS.gene78121.t1 | MTR_2g105330 | 26.829 | 451 | 285 | 16 | 12 | 443 | 3 | 427 | 1.16e-40 | 150 |
MS.gene78121.t1 | MTR_2g064495 | 26.144 | 459 | 278 | 16 | 12 | 443 | 3 | 427 | 1.20e-40 | 150 |
MS.gene78121.t1 | MTR_4g007540 | 27.527 | 465 | 265 | 19 | 12 | 443 | 3 | 428 | 5.64e-39 | 146 |
MS.gene78121.t1 | MTR_1g040315 | 26.222 | 450 | 254 | 12 | 20 | 455 | 17 | 402 | 1.07e-36 | 139 |
MS.gene78121.t1 | MTR_7g084940 | 27.679 | 448 | 289 | 15 | 8 | 442 | 12 | 437 | 1.26e-34 | 134 |
MS.gene78121.t1 | MTR_4g097090 | 28.741 | 421 | 252 | 13 | 7 | 395 | 4 | 408 | 1.99e-33 | 131 |
MS.gene78121.t1 | MTR_3g049150 | 28.607 | 402 | 242 | 15 | 20 | 391 | 10 | 396 | 1.75e-32 | 129 |
MS.gene78121.t1 | MTR_4g127650 | 28.169 | 355 | 235 | 8 | 15 | 357 | 13 | 359 | 1.89e-31 | 125 |
MS.gene78121.t1 | MTR_7g085930 | 30.729 | 384 | 206 | 18 | 10 | 357 | 6 | 365 | 1.32e-30 | 123 |
MS.gene78121.t1 | MTR_7g085990 | 29.243 | 383 | 213 | 17 | 10 | 357 | 2 | 361 | 3.10e-29 | 119 |
MS.gene78121.t1 | MTR_7g056087 | 26.281 | 449 | 279 | 16 | 18 | 441 | 10 | 431 | 4.71e-29 | 119 |
MS.gene78121.t1 | MTR_3g026950 | 26.329 | 414 | 248 | 17 | 20 | 395 | 10 | 404 | 3.78e-28 | 116 |
MS.gene78121.t1 | MTR_4g013050 | 26.058 | 449 | 249 | 16 | 20 | 442 | 12 | 403 | 2.27e-26 | 110 |
MS.gene78121.t1 | MTR_7g084910 | 26.667 | 435 | 258 | 15 | 19 | 434 | 24 | 416 | 4.87e-25 | 107 |
MS.gene78121.t1 | MTR_7g086000 | 26.077 | 418 | 255 | 14 | 20 | 399 | 12 | 413 | 5.17e-25 | 107 |
MS.gene78121.t1 | MTR_3g070170 | 25.503 | 447 | 277 | 15 | 41 | 448 | 37 | 466 | 1.08e-24 | 106 |
MS.gene78121.t1 | MTR_0502s0010 | 32.057 | 209 | 119 | 5 | 141 | 340 | 44 | 238 | 7.55e-23 | 97.4 |
MS.gene78121.t1 | MTR_2g007880 | 26.569 | 478 | 268 | 20 | 10 | 449 | 15 | 447 | 1.53e-22 | 100 |
MS.gene78121.t1 | MTR_3g086020 | 25.383 | 457 | 257 | 20 | 19 | 448 | 12 | 411 | 4.92e-22 | 98.2 |
MS.gene78121.t1 | MTR_5g090810 | 25.000 | 400 | 255 | 13 | 69 | 438 | 66 | 450 | 1.55e-20 | 94.4 |
MS.gene78121.t1 | MTR_4g094835 | 27.941 | 272 | 175 | 8 | 69 | 326 | 64 | 328 | 6.51e-20 | 92.4 |
MS.gene78121.t1 | MTR_5g090880 | 25.485 | 361 | 222 | 11 | 69 | 395 | 67 | 414 | 9.88e-20 | 92.0 |
MS.gene78121.t1 | MTR_5g090830 | 25.564 | 399 | 254 | 13 | 69 | 438 | 66 | 450 | 1.02e-19 | 91.7 |
MS.gene78121.t1 | MTR_3g450710 | 26.374 | 364 | 214 | 14 | 69 | 395 | 65 | 411 | 1.50e-19 | 91.3 |
MS.gene78121.t1 | MTR_7g114510 | 25.949 | 316 | 196 | 12 | 145 | 446 | 8 | 299 | 2.62e-19 | 89.0 |
MS.gene78121.t1 | MTR_4g094842 | 26.897 | 290 | 175 | 9 | 59 | 324 | 52 | 328 | 9.12e-19 | 89.0 |
MS.gene78121.t1 | MTR_0042s0190 | 26.496 | 234 | 160 | 6 | 163 | 395 | 1 | 223 | 1.01e-18 | 86.7 |
MS.gene78121.t1 | MTR_3g101900 | 27.143 | 280 | 172 | 9 | 69 | 329 | 66 | 332 | 1.39e-18 | 88.2 |
MS.gene78121.t1 | MTR_3g101960 | 26.736 | 288 | 163 | 10 | 69 | 329 | 68 | 334 | 2.21e-18 | 87.8 |
MS.gene78121.t1 | MTR_5g084870 | 24.307 | 469 | 277 | 17 | 20 | 458 | 11 | 431 | 3.79e-18 | 87.0 |
MS.gene78121.t1 | MTR_3g102020 | 27.143 | 280 | 172 | 10 | 69 | 329 | 69 | 335 | 6.39e-18 | 86.3 |
MS.gene78121.t1 | MTR_0042s0230 | 35.821 | 134 | 80 | 2 | 6 | 137 | 3 | 132 | 1.51e-17 | 80.1 |
MS.gene78121.t1 | MTR_7g114500 | 35.556 | 135 | 71 | 3 | 19 | 143 | 17 | 145 | 1.75e-17 | 79.7 |
MS.gene78121.t1 | MTR_3g450690 | 25.348 | 359 | 221 | 11 | 69 | 395 | 72 | 415 | 1.98e-17 | 84.7 |
MS.gene78121.t1 | MTR_4g094832 | 26.493 | 268 | 181 | 6 | 134 | 397 | 127 | 382 | 2.47e-17 | 84.3 |
MS.gene78121.t1 | MTR_3g101930 | 28.674 | 279 | 163 | 10 | 69 | 324 | 70 | 335 | 3.07e-17 | 84.3 |
MS.gene78121.t1 | MTR_3g088420 | 25.333 | 300 | 195 | 9 | 69 | 349 | 55 | 344 | 2.21e-16 | 81.3 |
MS.gene78121.t1 | MTR_4g022825 | 27.036 | 307 | 186 | 10 | 69 | 348 | 55 | 350 | 4.48e-16 | 80.5 |
MS.gene78121.t1 | MTR_4g022720 | 28.105 | 306 | 179 | 12 | 69 | 348 | 55 | 345 | 4.73e-16 | 80.5 |
MS.gene78121.t1 | MTR_4g094838 | 23.729 | 354 | 212 | 8 | 69 | 397 | 64 | 384 | 4.93e-16 | 80.5 |
MS.gene78121.t1 | MTR_3g102010 | 25.704 | 284 | 175 | 9 | 69 | 329 | 65 | 335 | 5.77e-16 | 80.1 |
MS.gene78121.t1 | MTR_7g114960 | 24.457 | 368 | 240 | 15 | 10 | 361 | 8 | 353 | 7.08e-16 | 80.1 |
MS.gene78121.t1 | MTR_3g051790 | 34.545 | 165 | 72 | 6 | 19 | 153 | 20 | 178 | 7.37e-16 | 75.9 |
MS.gene78121.t1 | MTR_8g039950 | 39.604 | 101 | 55 | 2 | 20 | 118 | 17 | 113 | 1.94e-15 | 73.2 |
MS.gene78121.t1 | MTR_3g026310 | 26.032 | 315 | 186 | 9 | 69 | 351 | 55 | 354 | 2.08e-15 | 78.6 |
MS.gene78121.t1 | MTR_4g022800 | 26.974 | 304 | 191 | 9 | 69 | 348 | 55 | 351 | 2.20e-15 | 78.6 |
MS.gene78121.t1 | MTR_4g022760 | 26.829 | 328 | 204 | 11 | 69 | 367 | 55 | 375 | 6.63e-15 | 76.6 |
MS.gene78121.t1 | MTR_8g041770 | 26.524 | 328 | 188 | 11 | 49 | 348 | 48 | 350 | 8.08e-15 | 76.6 |
MS.gene78121.t1 | MTR_4g022670 | 26.948 | 308 | 186 | 12 | 69 | 348 | 55 | 351 | 4.06e-14 | 74.3 |
MS.gene78121.t1 | MTR_4g094828 | 23.607 | 305 | 206 | 8 | 69 | 352 | 59 | 357 | 6.50e-14 | 73.9 |
MS.gene78121.t1 | MTR_0190s0020 | 26.296 | 270 | 175 | 7 | 69 | 324 | 63 | 322 | 1.09e-13 | 73.2 |
MS.gene78121.t1 | MTR_3g049140 | 29.609 | 179 | 107 | 7 | 226 | 391 | 21 | 193 | 1.66e-13 | 70.9 |
MS.gene78121.t1 | MTR_8g467590 | 23.716 | 409 | 252 | 18 | 13 | 391 | 4 | 382 | 5.79e-13 | 70.9 |
MS.gene78121.t1 | MTR_4g022290 | 24.731 | 279 | 177 | 9 | 69 | 326 | 60 | 326 | 1.55e-12 | 69.7 |
MS.gene78121.t1 | MTR_8g040780 | 30.303 | 132 | 78 | 3 | 222 | 348 | 16 | 138 | 5.85e-11 | 63.2 |
MS.gene78121.t1 | MTR_7g014200 | 25.183 | 409 | 253 | 17 | 69 | 441 | 69 | 460 | 7.24e-11 | 64.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene78121.t1 | AT5G07080 | 46.154 | 455 | 205 | 13 | 10 | 445 | 12 | 445 | 2.17e-125 | 372 |
MS.gene78121.t1 | AT2G25150 | 42.735 | 468 | 250 | 8 | 1 | 457 | 1 | 461 | 7.84e-118 | 353 |
MS.gene78121.t1 | AT2G23510 | 43.311 | 441 | 231 | 9 | 19 | 449 | 20 | 451 | 4.72e-115 | 345 |
MS.gene78121.t1 | AT3G47170 | 41.597 | 476 | 235 | 15 | 1 | 446 | 1 | 463 | 2.75e-108 | 329 |
MS.gene78121.t1 | AT1G28680 | 34.868 | 456 | 260 | 16 | 11 | 446 | 3 | 441 | 4.90e-82 | 260 |
MS.gene78121.t1 | AT1G28680 | 34.817 | 382 | 217 | 13 | 11 | 375 | 3 | 369 | 3.50e-66 | 218 |
MS.gene78121.t1 | AT5G41040 | 31.360 | 456 | 275 | 14 | 7 | 450 | 12 | 441 | 1.14e-62 | 210 |
MS.gene78121.t1 | AT5G41040 | 31.360 | 456 | 275 | 14 | 7 | 450 | 28 | 457 | 1.16e-62 | 210 |
MS.gene78121.t1 | AT3G03480 | 30.303 | 462 | 279 | 14 | 2 | 445 | 9 | 445 | 2.79e-55 | 191 |
MS.gene78121.t1 | AT3G62160 | 30.825 | 412 | 232 | 13 | 8 | 400 | 1 | 378 | 6.98e-55 | 189 |
MS.gene78121.t1 | AT5G17540 | 29.736 | 454 | 285 | 15 | 7 | 446 | 4 | 437 | 2.67e-53 | 186 |
MS.gene78121.t1 | AT5G63560 | 30.752 | 452 | 271 | 15 | 7 | 446 | 4 | 425 | 3.29e-53 | 184 |
MS.gene78121.t1 | AT3G48720 | 30.227 | 440 | 269 | 16 | 19 | 446 | 16 | 429 | 8.29e-53 | 183 |
MS.gene78121.t1 | AT1G27620 | 28.289 | 456 | 281 | 14 | 18 | 458 | 15 | 439 | 2.07e-46 | 167 |
MS.gene78121.t1 | AT1G03390 | 26.622 | 447 | 285 | 17 | 19 | 441 | 24 | 451 | 1.44e-42 | 157 |
MS.gene78121.t1 | AT2G40230 | 28.508 | 449 | 275 | 18 | 12 | 442 | 5 | 425 | 4.87e-42 | 154 |
MS.gene78121.t1 | AT5G48930 | 27.791 | 421 | 263 | 18 | 10 | 408 | 1 | 402 | 3.49e-35 | 135 |
MS.gene78121.t1 | AT1G65450 | 28.477 | 453 | 286 | 17 | 10 | 446 | 16 | 446 | 2.67e-34 | 134 |
MS.gene78121.t1 | AT5G57840 | 27.654 | 405 | 253 | 17 | 10 | 391 | 1 | 388 | 1.17e-30 | 123 |
MS.gene78121.t1 | AT2G19070 | 26.316 | 456 | 286 | 18 | 20 | 445 | 12 | 447 | 1.14e-27 | 115 |
MS.gene78121.t1 | AT4G31910 | 29.217 | 332 | 186 | 13 | 69 | 364 | 64 | 382 | 1.36e-24 | 106 |
MS.gene78121.t1 | AT4G15390 | 24.204 | 471 | 292 | 20 | 6 | 448 | 2 | 435 | 3.10e-21 | 96.3 |
MS.gene78121.t1 | AT4G15390 | 24.204 | 471 | 292 | 20 | 6 | 448 | 2 | 435 | 3.10e-21 | 96.3 |
MS.gene78121.t1 | AT1G31490 | 25.575 | 391 | 250 | 14 | 19 | 391 | 13 | 380 | 9.20e-21 | 94.7 |
MS.gene78121.t1 | AT1G24430 | 25.253 | 396 | 246 | 16 | 69 | 449 | 62 | 422 | 1.49e-20 | 94.0 |
MS.gene78121.t1 | AT3G50280 | 25.840 | 387 | 235 | 16 | 69 | 419 | 59 | 429 | 1.53e-20 | 94.0 |
MS.gene78121.t1 | AT1G78990 | 26.066 | 422 | 283 | 15 | 47 | 456 | 47 | 451 | 1.99e-20 | 94.0 |
MS.gene78121.t1 | AT1G32910 | 25.441 | 397 | 265 | 14 | 66 | 444 | 62 | 445 | 5.66e-19 | 89.7 |
MS.gene78121.t1 | AT5G07860 | 29.119 | 261 | 150 | 10 | 69 | 310 | 72 | 316 | 1.58e-18 | 88.2 |
MS.gene78121.t1 | AT3G30280 | 23.932 | 468 | 282 | 18 | 19 | 454 | 13 | 438 | 3.45e-18 | 87.0 |
MS.gene78121.t1 | AT5G67150 | 23.704 | 405 | 263 | 13 | 69 | 449 | 61 | 443 | 4.86e-16 | 80.5 |
MS.gene78121.t1 | AT5G07870 | 27.778 | 270 | 150 | 11 | 69 | 309 | 72 | 325 | 1.33e-15 | 79.3 |
MS.gene78121.t1 | AT5G67160 | 28.205 | 273 | 167 | 11 | 69 | 324 | 56 | 316 | 1.44e-15 | 79.0 |
MS.gene78121.t1 | AT5G16410 | 23.410 | 393 | 267 | 12 | 69 | 444 | 91 | 466 | 2.73e-15 | 78.2 |
MS.gene78121.t1 | AT3G50280 | 26.384 | 307 | 189 | 12 | 135 | 419 | 8 | 299 | 9.49e-15 | 75.5 |
MS.gene78121.t1 | AT5G07850 | 27.925 | 265 | 159 | 9 | 69 | 314 | 70 | 321 | 1.45e-14 | 75.9 |
MS.gene78121.t1 | AT5G42830 | 25.517 | 290 | 180 | 11 | 69 | 335 | 64 | 340 | 6.66e-14 | 73.9 |
MS.gene78121.t1 | AT5G23940 | 24.601 | 313 | 209 | 10 | 20 | 310 | 11 | 318 | 9.71e-14 | 73.6 |
MS.gene78121.t1 | AT3G50270 | 24.860 | 358 | 233 | 15 | 69 | 403 | 62 | 406 | 1.80e-13 | 72.8 |
MS.gene78121.t1 | AT5G01210 | 26.950 | 282 | 168 | 9 | 83 | 329 | 76 | 354 | 2.53e-13 | 72.4 |
MS.gene78121.t1 | AT5G47950 | 30.055 | 183 | 104 | 9 | 19 | 190 | 13 | 182 | 1.18e-11 | 67.0 |
MS.gene78121.t1 | AT3G29670 | 26.316 | 266 | 167 | 9 | 69 | 313 | 66 | 323 | 3.43e-11 | 65.5 |
MS.gene78121.t1 | AT3G50300 | 24.762 | 315 | 203 | 12 | 69 | 364 | 59 | 358 | 4.29e-11 | 65.1 |
MS.gene78121.t1 | AT3G29680 | 24.437 | 311 | 207 | 11 | 144 | 441 | 144 | 439 | 7.89e-11 | 64.3 |
Find 92 sgRNAs with CRISPR-Local
Find 113 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AGCTTCAATGGCTAAGTTTA+AGG | 0.175686 | 4.4:+47827979 | MS.gene78121:CDS |
CCTTTGCATGAAGGTTATTA+TGG | 0.209215 | 4.4:+47827578 | MS.gene78121:CDS |
ATTACACAAGCAGGGTCTTT+TGG | 0.247753 | 4.4:-47826858 | None:intergenic |
AACTTAGCCATTGAAGCTTT+TGG | 0.251306 | 4.4:-47827974 | None:intergenic |
GGCTTCAAATGTGGTCTTAA+AGG | 0.260325 | 4.4:+47827613 | MS.gene78121:CDS |
CTTTGTGGTGGTTTCACAAT+TGG | 0.270838 | 4.4:+47827119 | MS.gene78121:CDS |
TAATGAGGAAAGGGAATATA+AGG | 0.273542 | 4.4:+47827747 | MS.gene78121:CDS |
GTATACTATTATCCTCTTGC+AGG | 0.282976 | 4.4:+47826906 | MS.gene78121:CDS |
TTGTTGCAAGAAGTTGATTT+TGG | 0.295712 | 4.4:+47827821 | MS.gene78121:CDS |
CATCAACTTTCATGACCTTA+AGG | 0.315561 | 4.4:-47828015 | None:intergenic |
TGATAACCCTTCTCATCCTT+TGG | 0.316838 | 4.4:+47827076 | MS.gene78121:CDS |
AACCATCTTTGAAACCTGTT+TGG | 0.324638 | 4.4:+47827228 | MS.gene78121:CDS |
TAAACGGTGAAATTATAAAA+AGG | 0.331543 | 4.4:+47827378 | MS.gene78121:CDS |
AAACACTCGGTGCATATGTT+TGG | 0.353386 | 4.4:+47827468 | MS.gene78121:CDS |
CCTGTTCCTTGGAACATGTT+TGG | 0.361072 | 4.4:+47827869 | MS.gene78121:CDS |
TCATGTGAAATTTCTTTAGT+TGG | 0.361629 | 4.4:-47827344 | None:intergenic |
TCATTTGGGAAATCAAGATT+TGG | 0.367023 | 4.4:-47826834 | None:intergenic |
CATAGTGTTTGTGATGGTTA+TGG | 0.389402 | 4.4:+47827155 | MS.gene78121:CDS |
CTTCAATGAAAGGAGGAGTT+AGG | 0.389486 | 4.4:+47827936 | MS.gene78121:CDS |
TTAGCATTTGATTCCATGAA+TGG | 0.395349 | 4.4:-47826987 | None:intergenic |
AATTTCAGAAGGTGTGGGCT+TGG | 0.400306 | 4.4:-47826742 | None:intergenic |
ACCATCTTTGAAACCTGTTT+GGG | 0.404194 | 4.4:+47827229 | MS.gene78121:CDS |
TGGCAGAGAATGTTGATGTT+AGG | 0.405640 | 4.4:-47826792 | None:intergenic |
GCTTTGAAATTGAACAATGA+TGG | 0.405825 | 4.4:+47827506 | MS.gene78121:CDS |
TCTTCCCTTCATTATCTTGA+AGG | 0.406389 | 4.4:+47827020 | MS.gene78121:CDS |
GTTTGTAGACATAAATTGTT+TGG | 0.413551 | 4.4:-47826812 | None:intergenic |
ATTGAAGAATCCAACTTACT+TGG | 0.421620 | 4.4:-47827920 | None:intergenic |
GGAGGAGATGGAATTCCTTA+AGG | 0.425685 | 4.4:+47828000 | MS.gene78121:CDS |
TTATTATGGCAATGCATTTG+TGG | 0.436342 | 4.4:+47827592 | MS.gene78121:CDS |
CTTCCCTTCATTATCTTGAA+GGG | 0.438956 | 4.4:+47827021 | MS.gene78121:CDS |
GTCACTTCCAAAAGCTTCAA+TGG | 0.442559 | 4.4:+47827967 | MS.gene78121:CDS |
CATCATTGGTGTTAACTGAT+TGG | 0.443121 | 4.4:+47827786 | MS.gene78121:CDS |
AGAAGCACTCTCAAAAGCTT+TGG | 0.444830 | 4.4:+47826884 | MS.gene78121:CDS |
TGTTGGAGATAATGAGGAAA+GGG | 0.449792 | 4.4:+47827738 | MS.gene78121:CDS |
TGAAGGAACTGGTGCATCAT+TGG | 0.453829 | 4.4:+47827772 | MS.gene78121:CDS |
CCAAACATGTTCCAAGGAAC+AGG | 0.453944 | 4.4:-47827869 | None:intergenic |
ACACTTGATGATGGAAAGCT+TGG | 0.463753 | 4.4:+47826939 | MS.gene78121:CDS |
TCCCAAACAGGTTTCAAAGA+TGG | 0.465468 | 4.4:-47827230 | None:intergenic |
TGTCCTTGGTATCAAGACTA+AGG | 0.469953 | 4.4:-47826701 | None:intergenic |
TTCAGAAGGTGTGGGCTTGG+AGG | 0.471820 | 4.4:-47826739 | None:intergenic |
TGAATATTGTGCCTGTTCCT+TGG | 0.474624 | 4.4:+47827858 | MS.gene78121:CDS |
AGTTGGGGTGAGAAAACTAT+TGG | 0.476715 | 4.4:+47827550 | MS.gene78121:CDS |
TGGCGACGGAGTTCCATTCA+TGG | 0.479811 | 4.4:+47826974 | MS.gene78121:CDS |
TCAGAAGGTGTGGGCTTGGA+GGG | 0.480591 | 4.4:-47826738 | None:intergenic |
GGCTAAGTTTAAGGAGGAGA+TGG | 0.481711 | 4.4:+47827988 | MS.gene78121:CDS |
CTTTGAAATTGAACAATGAT+GGG | 0.484994 | 4.4:+47827507 | MS.gene78121:CDS |
GTTATTATCTTTCCTGCAAG+AGG | 0.487078 | 4.4:-47826918 | None:intergenic |
TTTAACAATCACAATGTCCT+TGG | 0.490781 | 4.4:-47826715 | None:intergenic |
AAAGGGAATATAAGGGTTGA+AGG | 0.493013 | 4.4:+47827755 | MS.gene78121:CDS |
GAAGAATCCAACTTACTTGG+AGG | 0.494568 | 4.4:-47827917 | None:intergenic |
AATATAAGGGTTGAAGGAAC+TGG | 0.495175 | 4.4:+47827761 | MS.gene78121:CDS |
CAATCCCTTCAAGATAATGA+AGG | 0.502121 | 4.4:-47827025 | None:intergenic |
TTGGATCCACCTTTGCATGA+AGG | 0.506278 | 4.4:+47827569 | MS.gene78121:CDS |
TGGTATCAAGACTAAGGGAC+AGG | 0.508284 | 4.4:-47826695 | None:intergenic |
TTATCTATGAGAAATTGAAA+TGG | 0.516169 | 4.4:-47827293 | None:intergenic |
AAGATAATAACACTTGATGA+TGG | 0.516590 | 4.4:+47826930 | MS.gene78121:CDS |
TTAACTGATTGGAGACAACT+TGG | 0.516863 | 4.4:+47827797 | MS.gene78121:CDS |
TGGTGGTTTCACAATTGGAA+TGG | 0.517210 | 4.4:+47827124 | MS.gene78121:CDS |
GGTGGTTTCACAATTGGAAT+GGG | 0.521542 | 4.4:+47827125 | MS.gene78121:CDS |
GCTTCTTTGATTACACAAGC+AGG | 0.523958 | 4.4:-47826867 | None:intergenic |
TTAACATGTTGGAGATAATG+AGG | 0.531085 | 4.4:+47827732 | MS.gene78121:CDS |
GTGACAAAGTTTCTTTGTGG+TGG | 0.534259 | 4.4:+47827107 | MS.gene78121:CDS |
GATGTTAGGATCATTGTCAA+TGG | 0.543218 | 4.4:-47826778 | None:intergenic |
TGAAAGAATTTCAGAAGGTG+TGG | 0.544259 | 4.4:-47826748 | None:intergenic |
AATGAGGAAAGGGAATATAA+GGG | 0.546323 | 4.4:+47827748 | MS.gene78121:CDS |
TTTATATATTCATTATTCAA+AGG | 0.553206 | 4.4:-47827701 | None:intergenic |
GCTCAAAATGAAACTAATGA+AGG | 0.557505 | 4.4:+47827400 | MS.gene78121:CDS |
TGATGATGACAATGTGATGA+AGG | 0.559889 | 4.4:+47827427 | MS.gene78121:CDS |
CCATAATAACCTTCATGCAA+AGG | 0.562738 | 4.4:-47827578 | None:intergenic |
CACTCGGTGCATATGTTTGG+AGG | 0.563831 | 4.4:+47827471 | MS.gene78121:CDS |
CTTCTTTGATTACACAAGCA+GGG | 0.565435 | 4.4:-47826866 | None:intergenic |
TGCATTTGTGGCTTCAAATG+TGG | 0.568905 | 4.4:+47827604 | MS.gene78121:CDS |
AAGTTGGATTCTTCAATGAA+AGG | 0.570860 | 4.4:+47827926 | MS.gene78121:CDS |
AAGGTGACAAAGTTTCTTTG+TGG | 0.576847 | 4.4:+47827104 | MS.gene78121:CDS |
GAAAGAATTTCAGAAGGTGT+GGG | 0.577947 | 4.4:-47826747 | None:intergenic |
GTCCTTGGTATCAAGACTAA+GGG | 0.578066 | 4.4:-47826700 | None:intergenic |
GGAATCAACTGCAATGGCGA+CGG | 0.579539 | 4.4:+47826960 | MS.gene78121:CDS |
GCACTTGCTGAACTTGCAAG+TGG | 0.593556 | 4.4:+47827197 | MS.gene78121:CDS |
ATGTTGGAGATAATGAGGAA+AGG | 0.596819 | 4.4:+47827737 | MS.gene78121:CDS |
AAGCTTGGAATCAACTGCAA+TGG | 0.597334 | 4.4:+47826954 | MS.gene78121:CDS |
AATCCCTTCAAGATAATGAA+GGG | 0.597371 | 4.4:-47827024 | None:intergenic |
TTCAATGGCTAAGTTTAAGG+AGG | 0.601083 | 4.4:+47827982 | MS.gene78121:CDS |
TTGTCACATAGTGTTTGTGA+TGG | 0.601711 | 4.4:+47827149 | MS.gene78121:CDS |
TTCACAACACTTGAAACACT+CGG | 0.603198 | 4.4:+47827455 | MS.gene78121:CDS |
TAATAACCTTCATGCAAAGG+TGG | 0.605526 | 4.4:-47827575 | None:intergenic |
ACAAAACCAAACATGTTCCA+AGG | 0.607274 | 4.4:-47827875 | None:intergenic |
GTCCCTTAGTCTTGATACCA+AGG | 0.611096 | 4.4:+47826698 | MS.gene78121:CDS |
TGCATATGTTTGGAGGTCAA+AGG | 0.611126 | 4.4:+47827478 | MS.gene78121:CDS |
GTTAGGATCATTGTCAATGG+TGG | 0.626574 | 4.4:-47826775 | None:intergenic |
TTGGATTCTTCAATGAAAGG+AGG | 0.629656 | 4.4:+47827929 | MS.gene78121:CDS |
GAAAGTGAAAGAATTTCAGA+AGG | 0.631868 | 4.4:-47826753 | None:intergenic |
GGTATCAAGACTAAGGGACA+GGG | 0.686582 | 4.4:-47826694 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTTATATATTCATTATTCAA+AGG | - | chr4.4:47827704-47827723 | None:intergenic | 10.0% |
!! | AAAAAATTCAATTAACATGT+TGG | + | chr4.4:47827721-47827740 | MS.gene78121:CDS | 15.0% |
!! | TAAACGGTGAAATTATAAAA+AGG | + | chr4.4:47827378-47827397 | MS.gene78121:CDS | 20.0% |
!! | TTATCTATGAGAAATTGAAA+TGG | - | chr4.4:47827296-47827315 | None:intergenic | 20.0% |
!!! | ATTTCTTTAGTTGGTAAAAA+AGG | - | chr4.4:47827338-47827357 | None:intergenic | 20.0% |
!!! | CATGAATGTTTTAACTTAAA+CGG | + | chr4.4:47827362-47827381 | MS.gene78121:CDS | 20.0% |
! | AAGATAATAACACTTGATGA+TGG | + | chr4.4:47826930-47826949 | MS.gene78121:CDS | 25.0% |
! | GTTTGTAGACATAAATTGTT+TGG | - | chr4.4:47826815-47826834 | None:intergenic | 25.0% |
! | TCATGTGAAATTTCTTTAGT+TGG | - | chr4.4:47827347-47827366 | None:intergenic | 25.0% |
!!! | CTTTGAAATTGAACAATGAT+GGG | + | chr4.4:47827507-47827526 | MS.gene78121:CDS | 25.0% |
AAGTTGGATTCTTCAATGAA+AGG | + | chr4.4:47827926-47827945 | MS.gene78121:CDS | 30.0% | |
AATCCCTTCAAGATAATGAA+GGG | - | chr4.4:47827027-47827046 | None:intergenic | 30.0% | |
AATGAGGAAAGGGAATATAA+GGG | + | chr4.4:47827748-47827767 | MS.gene78121:CDS | 30.0% | |
AGCTTAACAACTTCAAAAAG+TGG | - | chr4.4:47827659-47827678 | None:intergenic | 30.0% | |
ATTGAAGAATCCAACTTACT+TGG | - | chr4.4:47827923-47827942 | None:intergenic | 30.0% | |
GAAAGTGAAAGAATTTCAGA+AGG | - | chr4.4:47826756-47826775 | None:intergenic | 30.0% | |
GCTCAAAATGAAACTAATGA+AGG | + | chr4.4:47827400-47827419 | MS.gene78121:CDS | 30.0% | |
TAAAAACCAAAGGATGAGAA+GGG | - | chr4.4:47827085-47827104 | None:intergenic | 30.0% | |
TAATGAGGAAAGGGAATATA+AGG | + | chr4.4:47827747-47827766 | MS.gene78121:CDS | 30.0% | |
TCATTTGGGAAATCAAGATT+TGG | - | chr4.4:47826837-47826856 | None:intergenic | 30.0% | |
TTAAAAACCAAAGGATGAGA+AGG | - | chr4.4:47827086-47827105 | None:intergenic | 30.0% | |
TTAACATGTTGGAGATAATG+AGG | + | chr4.4:47827732-47827751 | MS.gene78121:CDS | 30.0% | |
TTAGCATTTGATTCCATGAA+TGG | - | chr4.4:47826990-47827009 | None:intergenic | 30.0% | |
TTATTATGGCAATGCATTTG+TGG | + | chr4.4:47827592-47827611 | MS.gene78121:CDS | 30.0% | |
TTTAACAATCACAATGTCCT+TGG | - | chr4.4:47826718-47826737 | None:intergenic | 30.0% | |
TTTGTCACCTTAAAAACCAA+AGG | - | chr4.4:47827095-47827114 | None:intergenic | 30.0% | |
!! | GCTTTGAAATTGAACAATGA+TGG | + | chr4.4:47827506-47827525 | MS.gene78121:CDS | 30.0% |
!! | TTGTTGCAAGAAGTTGATTT+TGG | + | chr4.4:47827821-47827840 | MS.gene78121:CDS | 30.0% |
!!! | ACTATGTTTTGTTTAGCAGT+TGG | + | chr4.4:47827533-47827552 | MS.gene78121:CDS | 30.0% |
!!! | CTATGTTTTGTTTAGCAGTT+GGG | + | chr4.4:47827534-47827553 | MS.gene78121:CDS | 30.0% |
!!! | TATGTTTTGTTTAGCAGTTG+GGG | + | chr4.4:47827535-47827554 | MS.gene78121:CDS | 30.0% |
!!! | TTCTCATCCTTTGGTTTTTA+AGG | + | chr4.4:47827085-47827104 | MS.gene78121:CDS | 30.0% |
AAAGGGAATATAAGGGTTGA+AGG | + | chr4.4:47827755-47827774 | MS.gene78121:CDS | 35.0% | |
AAGGTGACAAAGTTTCTTTG+TGG | + | chr4.4:47827104-47827123 | MS.gene78121:CDS | 35.0% | |
AATATAAGGGTTGAAGGAAC+TGG | + | chr4.4:47827761-47827780 | MS.gene78121:CDS | 35.0% | |
ACAAAACCAAACATGTTCCA+AGG | - | chr4.4:47827878-47827897 | None:intergenic | 35.0% | |
ACTTACTTGGAGGCAAAAAA+AGG | - | chr4.4:47827910-47827929 | None:intergenic | 35.0% | |
AGCTTCAATGGCTAAGTTTA+AGG | + | chr4.4:47827979-47827998 | MS.gene78121:CDS | 35.0% | |
ATGTTGGAGATAATGAGGAA+AGG | + | chr4.4:47827737-47827756 | MS.gene78121:CDS | 35.0% | |
CAATCCCTTCAAGATAATGA+AGG | - | chr4.4:47827028-47827047 | None:intergenic | 35.0% | |
CATAGTGTTTGTGATGGTTA+TGG | + | chr4.4:47827155-47827174 | MS.gene78121:CDS | 35.0% | |
CATCAACTTTCATGACCTTA+AGG | - | chr4.4:47828018-47828037 | None:intergenic | 35.0% | |
CCATAATAACCTTCATGCAA+AGG | - | chr4.4:47827581-47827600 | None:intergenic | 35.0% | |
CCTTTGCATGAAGGTTATTA+TGG | + | chr4.4:47827578-47827597 | MS.gene78121:CDS | 35.0% | |
CTTCCCTTCATTATCTTGAA+GGG | + | chr4.4:47827021-47827040 | MS.gene78121:CDS | 35.0% | |
CTTCTTTGATTACACAAGCA+GGG | - | chr4.4:47826869-47826888 | None:intergenic | 35.0% | |
GATGTTAGGATCATTGTCAA+TGG | - | chr4.4:47826781-47826800 | None:intergenic | 35.0% | |
GTATACTATTATCCTCTTGC+AGG | + | chr4.4:47826906-47826925 | MS.gene78121:CDS | 35.0% | |
GTTATTATCTTTCCTGCAAG+AGG | - | chr4.4:47826921-47826940 | None:intergenic | 35.0% | |
TAATAACCTTCATGCAAAGG+TGG | - | chr4.4:47827578-47827597 | None:intergenic | 35.0% | |
TCTTCCCTTCATTATCTTGA+AGG | + | chr4.4:47827020-47827039 | MS.gene78121:CDS | 35.0% | |
TGAAAGAATTTCAGAAGGTG+TGG | - | chr4.4:47826751-47826770 | None:intergenic | 35.0% | |
TGTTCCAACAGCACAAAAAT+TGG | + | chr4.4:47827049-47827068 | MS.gene78121:CDS | 35.0% | |
TGTTGGAGATAATGAGGAAA+GGG | + | chr4.4:47827738-47827757 | MS.gene78121:CDS | 35.0% | |
TTAACTGATTGGAGACAACT+TGG | + | chr4.4:47827797-47827816 | MS.gene78121:CDS | 35.0% | |
TTCAATGGCTAAGTTTAAGG+AGG | + | chr4.4:47827982-47828001 | MS.gene78121:CDS | 35.0% | |
TTCACAACACTTGAAACACT+CGG | + | chr4.4:47827455-47827474 | MS.gene78121:CDS | 35.0% | |
TTGGATTCTTCAATGAAAGG+AGG | + | chr4.4:47827929-47827948 | MS.gene78121:CDS | 35.0% | |
TTGTCACATAGTGTTTGTGA+TGG | + | chr4.4:47827149-47827168 | MS.gene78121:CDS | 35.0% | |
! | AACACCAATTTTTGTGCTGT+TGG | - | chr4.4:47827056-47827075 | None:intergenic | 35.0% |
! | AACTTAGCCATTGAAGCTTT+TGG | - | chr4.4:47827977-47827996 | None:intergenic | 35.0% |
! | GAAAGAATTTCAGAAGGTGT+GGG | - | chr4.4:47826750-47826769 | None:intergenic | 35.0% |
! | TGATGATGACAATGTGATGA+AGG | + | chr4.4:47827427-47827446 | MS.gene78121:CDS | 35.0% |
!! | AACCATCTTTGAAACCTGTT+TGG | + | chr4.4:47827228-47827247 | MS.gene78121:CDS | 35.0% |
!! | ACCATCTTTGAAACCTGTTT+GGG | + | chr4.4:47827229-47827248 | MS.gene78121:CDS | 35.0% |
!! | AGAAGTTGATTTTGGATGGA+AGG | + | chr4.4:47827829-47827848 | MS.gene78121:CDS | 35.0% |
!! | CATCATTGGTGTTAACTGAT+TGG | + | chr4.4:47827786-47827805 | MS.gene78121:CDS | 35.0% |
!! | TGCAAGAAGTTGATTTTGGA+TGG | + | chr4.4:47827825-47827844 | MS.gene78121:CDS | 35.0% |
!!! | TTTTTTGCCTCCAAGTAAGT+TGG | + | chr4.4:47827910-47827929 | MS.gene78121:CDS | 35.0% |
AAGCTTGGAATCAACTGCAA+TGG | + | chr4.4:47826954-47826973 | MS.gene78121:CDS | 40.0% | |
AGTTGGGGTGAGAAAACTAT+TGG | + | chr4.4:47827550-47827569 | MS.gene78121:CDS | 40.0% | |
CTTCAATGAAAGGAGGAGTT+AGG | + | chr4.4:47827936-47827955 | MS.gene78121:CDS | 40.0% | |
CTTTGTGGTGGTTTCACAAT+TGG | + | chr4.4:47827119-47827138 | MS.gene78121:CDS | 40.0% | |
GAAGAATCCAACTTACTTGG+AGG | - | chr4.4:47827920-47827939 | None:intergenic | 40.0% | |
GCTTCTTTGATTACACAAGC+AGG | - | chr4.4:47826870-47826889 | None:intergenic | 40.0% | |
GGTGGTTTCACAATTGGAAT+GGG | + | chr4.4:47827125-47827144 | MS.gene78121:CDS | 40.0% | |
GTCACTTCCAAAAGCTTCAA+TGG | + | chr4.4:47827967-47827986 | MS.gene78121:CDS | 40.0% | |
GTCCTTGGTATCAAGACTAA+GGG | - | chr4.4:47826703-47826722 | None:intergenic | 40.0% | |
GTGACAAAGTTTCTTTGTGG+TGG | + | chr4.4:47827107-47827126 | MS.gene78121:CDS | 40.0% | |
GTTAGGATCATTGTCAATGG+TGG | - | chr4.4:47826778-47826797 | None:intergenic | 40.0% | |
TCCCAAACAGGTTTCAAAGA+TGG | - | chr4.4:47827233-47827252 | None:intergenic | 40.0% | |
TGAATATTGTGCCTGTTCCT+TGG | + | chr4.4:47827858-47827877 | MS.gene78121:CDS | 40.0% | |
TGATAACCCTTCTCATCCTT+TGG | + | chr4.4:47827076-47827095 | MS.gene78121:CDS | 40.0% | |
TGCATATGTTTGGAGGTCAA+AGG | + | chr4.4:47827478-47827497 | MS.gene78121:CDS | 40.0% | |
TGCATTTGTGGCTTCAAATG+TGG | + | chr4.4:47827604-47827623 | MS.gene78121:CDS | 40.0% | |
TGGCAGAGAATGTTGATGTT+AGG | - | chr4.4:47826795-47826814 | None:intergenic | 40.0% | |
TGGTGGTTTCACAATTGGAA+TGG | + | chr4.4:47827124-47827143 | MS.gene78121:CDS | 40.0% | |
TGTCCTTGGTATCAAGACTA+AGG | - | chr4.4:47826704-47826723 | None:intergenic | 40.0% | |
! | ATTACACAAGCAGGGTCTTT+TGG | - | chr4.4:47826861-47826880 | None:intergenic | 40.0% |
! | GGCTTCAAATGTGGTCTTAA+AGG | + | chr4.4:47827613-47827632 | MS.gene78121:CDS | 40.0% |
! | TTACACAAGCAGGGTCTTTT+GGG | - | chr4.4:47826860-47826879 | None:intergenic | 40.0% |
!! | AAACACTCGGTGCATATGTT+TGG | + | chr4.4:47827468-47827487 | MS.gene78121:CDS | 40.0% |
!! | ACACTTGATGATGGAAAGCT+TGG | + | chr4.4:47826939-47826958 | MS.gene78121:CDS | 40.0% |
!! | AGAAGCACTCTCAAAAGCTT+TGG | + | chr4.4:47826884-47826903 | MS.gene78121:CDS | 40.0% |
AATCTCTCTCTCTCCCAAAC+AGG | - | chr4.4:47827245-47827264 | None:intergenic | 45.0% | |
CCAAACATGTTCCAAGGAAC+AGG | - | chr4.4:47827872-47827891 | None:intergenic | 45.0% | |
CCTGTTCCTTGGAACATGTT+TGG | + | chr4.4:47827869-47827888 | MS.gene78121:CDS | 45.0% | |
GGAGGAGATGGAATTCCTTA+AGG | + | chr4.4:47828000-47828019 | MS.gene78121:CDS | 45.0% | |
GGCTAAGTTTAAGGAGGAGA+TGG | + | chr4.4:47827988-47828007 | MS.gene78121:CDS | 45.0% | |
GGTATCAAGACTAAGGGACA+GGG | - | chr4.4:47826697-47826716 | None:intergenic | 45.0% | |
TGAAGGAACTGGTGCATCAT+TGG | + | chr4.4:47827772-47827791 | MS.gene78121:CDS | 45.0% | |
TGGTATCAAGACTAAGGGAC+AGG | - | chr4.4:47826698-47826717 | None:intergenic | 45.0% | |
TTGGATCCACCTTTGCATGA+AGG | + | chr4.4:47827569-47827588 | MS.gene78121:CDS | 45.0% | |
! | AATTTCAGAAGGTGTGGGCT+TGG | - | chr4.4:47826745-47826764 | None:intergenic | 45.0% |
!! | CAGGGTCTTTTGGGTCATTT+GGG | - | chr4.4:47826851-47826870 | None:intergenic | 45.0% |
!! | GTCCCTTAGTCTTGATACCA+AGG | + | chr4.4:47826698-47826717 | MS.gene78121:CDS | 45.0% |
GGAATCAACTGCAATGGCGA+CGG | + | chr4.4:47826960-47826979 | MS.gene78121:CDS | 50.0% | |
! | GCACTTGCTGAACTTGCAAG+TGG | + | chr4.4:47827197-47827216 | MS.gene78121:CDS | 50.0% |
!! | CACTCGGTGCATATGTTTGG+AGG | + | chr4.4:47827471-47827490 | MS.gene78121:CDS | 50.0% |
!! | GCAGGGTCTTTTGGGTCATT+TGG | - | chr4.4:47826852-47826871 | None:intergenic | 50.0% |
TGGCGACGGAGTTCCATTCA+TGG | + | chr4.4:47826974-47826993 | MS.gene78121:CDS | 55.0% | |
! | TCAGAAGGTGTGGGCTTGGA+GGG | - | chr4.4:47826741-47826760 | None:intergenic | 55.0% |
! | TTCAGAAGGTGTGGGCTTGG+AGG | - | chr4.4:47826742-47826761 | None:intergenic | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.4 | gene | 47826675 | 47828051 | 47826675 | ID=MS.gene78121 |
chr4.4 | mRNA | 47826675 | 47828051 | 47826675 | ID=MS.gene78121.t1;Parent=MS.gene78121 |
chr4.4 | exon | 47826675 | 47828051 | 47826675 | ID=MS.gene78121.t1.exon1;Parent=MS.gene78121.t1 |
chr4.4 | CDS | 47826675 | 47828051 | 47826675 | ID=cds.MS.gene78121.t1;Parent=MS.gene78121.t1 |
Gene Sequence |
Protein sequence |