Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35823.t1 | XP_003596979.1 | 99 | 402 | 4 | 0 | 1 | 402 | 1 | 402 | 1.30E-217 | 765.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35823.t1 | A8MRC7 | 72.7 | 407 | 106 | 2 | 1 | 402 | 1 | 407 | 1.8e-178 | 626.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35823.t1 | G7ITY6 | 99.0 | 402 | 4 | 0 | 1 | 402 | 1 | 402 | 9.6e-218 | 765.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene35823 | 0.815315 | 9.85E-52 | -1.69E-46 |
| MS.gene049159 | MS.gene35823 | 0.848043 | 7.88E-60 | -1.69E-46 |
| MS.gene049254 | MS.gene35823 | 0.807256 | 5.53E-50 | -1.69E-46 |
| MS.gene049272 | MS.gene35823 | 0.802265 | 6.09E-49 | -1.69E-46 |
| MS.gene049378 | MS.gene35823 | 0.838681 | 2.49E-57 | -1.69E-46 |
| MS.gene049404 | MS.gene35823 | 0.825002 | 5.94E-54 | -1.69E-46 |
| MS.gene049435 | MS.gene35823 | 0.859686 | 3.48E-63 | -1.69E-46 |
| MS.gene049647 | MS.gene35823 | 0.825662 | 4.15E-54 | -1.69E-46 |
| MS.gene049669 | MS.gene35823 | 0.82146 | 3.99E-53 | -1.69E-46 |
| MS.gene049958 | MS.gene35823 | 0.802227 | 6.20E-49 | -1.69E-46 |
| MS.gene050156 | MS.gene35823 | 0.810413 | 1.17E-50 | -1.69E-46 |
| MS.gene050226 | MS.gene35823 | 0.825326 | 4.98E-54 | -1.69E-46 |
| MS.gene050227 | MS.gene35823 | 0.81045 | 1.15E-50 | -1.69E-46 |
| MS.gene050228 | MS.gene35823 | 0.81225 | 4.66E-51 | -1.69E-46 |
| MS.gene050442 | MS.gene35823 | 0.874023 | 9.33E-68 | -1.69E-46 |
| MS.gene050605 | MS.gene35823 | 0.812617 | 3.87E-51 | -1.69E-46 |
| MS.gene050680 | MS.gene35823 | 0.841679 | 4.11E-58 | -1.69E-46 |
| MS.gene050750 | MS.gene35823 | 0.825531 | 4.46E-54 | -1.69E-46 |
| MS.gene050759 | MS.gene35823 | 0.816134 | 6.47E-52 | -1.69E-46 |
| MS.gene050762 | MS.gene35823 | 0.831739 | 1.41E-55 | -1.69E-46 |
| MS.gene050763 | MS.gene35823 | 0.831312 | 1.79E-55 | -1.69E-46 |
| MS.gene050807 | MS.gene35823 | 0.8156 | 8.51E-52 | -1.69E-46 |
| MS.gene050826 | MS.gene35823 | 0.848234 | 6.98E-60 | -1.69E-46 |
| MS.gene050844 | MS.gene35823 | 0.827839 | 1.25E-54 | -1.69E-46 |
| MS.gene050953 | MS.gene35823 | 0.826552 | 2.55E-54 | -1.69E-46 |
| MS.gene050962 | MS.gene35823 | 0.809453 | 1.88E-50 | -1.69E-46 |
| MS.gene051066 | MS.gene35823 | 0.818689 | 1.72E-52 | -1.69E-46 |
| MS.gene051147 | MS.gene35823 | 0.853671 | 2.05E-61 | -1.69E-46 |
| MS.gene051198 | MS.gene35823 | 0.847419 | 1.17E-59 | -1.69E-46 |
| MS.gene051210 | MS.gene35823 | 0.840494 | 8.41E-58 | -1.69E-46 |
| MS.gene051247 | MS.gene35823 | 0.812208 | 4.76E-51 | -1.69E-46 |
| MS.gene051265 | MS.gene35823 | 0.805509 | 1.29E-49 | -1.69E-46 |
| MS.gene051368 | MS.gene35823 | 0.828978 | 6.65E-55 | -1.69E-46 |
| MS.gene051490 | MS.gene35823 | 0.816508 | 5.33E-52 | -1.69E-46 |
| MS.gene051800 | MS.gene35823 | 0.852984 | 3.22E-61 | -1.69E-46 |
| MS.gene051935 | MS.gene35823 | 0.80484 | 1.78E-49 | -1.69E-46 |
| MS.gene052042 | MS.gene35823 | 0.822512 | 2.28E-53 | -1.69E-46 |
| MS.gene052056 | MS.gene35823 | -0.814903 | 1.22E-51 | -1.69E-46 |
| MS.gene052333 | MS.gene35823 | 0.853335 | 2.56E-61 | -1.69E-46 |
| MS.gene052389 | MS.gene35823 | 0.819799 | 9.61E-53 | -1.69E-46 |
| MS.gene052426 | MS.gene35823 | 0.827494 | 1.52E-54 | -1.69E-46 |
| MS.gene052516 | MS.gene35823 | 0.812645 | 3.82E-51 | -1.69E-46 |
| MS.gene052586 | MS.gene35823 | 0.82553 | 4.46E-54 | -1.69E-46 |
| MS.gene052665 | MS.gene35823 | 0.810624 | 1.05E-50 | -1.69E-46 |
| MS.gene052674 | MS.gene35823 | 0.845345 | 4.30E-59 | -1.69E-46 |
| MS.gene052675 | MS.gene35823 | 0.845577 | 3.72E-59 | -1.69E-46 |
| MS.gene052677 | MS.gene35823 | 0.856889 | 2.37E-62 | -1.69E-46 |
| MS.gene052773 | MS.gene35823 | 0.808575 | 2.89E-50 | -1.69E-46 |
| MS.gene052863 | MS.gene35823 | 0.816829 | 4.52E-52 | -1.69E-46 |
| MS.gene05288 | MS.gene35823 | 0.820011 | 8.59E-53 | -1.69E-46 |
| MS.gene052896 | MS.gene35823 | 0.811414 | 7.08E-51 | -1.69E-46 |
| MS.gene05289 | MS.gene35823 | 0.80161 | 8.30E-49 | -1.69E-46 |
| MS.gene053008 | MS.gene35823 | 0.823116 | 1.65E-53 | -1.69E-46 |
| MS.gene053147 | MS.gene35823 | 0.82962 | 4.65E-55 | -1.69E-46 |
| MS.gene053166 | MS.gene35823 | 0.849157 | 3.87E-60 | -1.69E-46 |
| MS.gene053201 | MS.gene35823 | 0.803715 | 3.05E-49 | -1.69E-46 |
| MS.gene053221 | MS.gene35823 | 0.801812 | 7.55E-49 | -1.69E-46 |
| MS.gene053584 | MS.gene35823 | 0.807637 | 4.59E-50 | -1.69E-46 |
| MS.gene053621 | MS.gene35823 | 0.811063 | 8.44E-51 | -1.69E-46 |
| MS.gene05414 | MS.gene35823 | 0.812512 | 4.08E-51 | -1.69E-46 |
| MS.gene05415 | MS.gene35823 | 0.826383 | 2.80E-54 | -1.69E-46 |
| MS.gene054236 | MS.gene35823 | 0.847419 | 1.17E-59 | -1.69E-46 |
| MS.gene054291 | MS.gene35823 | -0.832842 | 7.50E-56 | -1.69E-46 |
| MS.gene054379 | MS.gene35823 | 0.844681 | 6.50E-59 | -1.69E-46 |
| MS.gene054405 | MS.gene35823 | 0.820287 | 7.43E-53 | -1.69E-46 |
| MS.gene054467 | MS.gene35823 | 0.868409 | 6.67E-66 | -1.69E-46 |
| MS.gene054468 | MS.gene35823 | 0.873158 | 1.83E-67 | -1.69E-46 |
| MS.gene054472 | MS.gene35823 | 0.83167 | 1.46E-55 | -1.69E-46 |
| MS.gene054479 | MS.gene35823 | 0.840273 | 9.60E-58 | -1.69E-46 |
| MS.gene054559 | MS.gene35823 | 0.825449 | 4.66E-54 | -1.69E-46 |
| MS.gene054576 | MS.gene35823 | 0.801077 | 1.07E-48 | -1.69E-46 |
| MS.gene054581 | MS.gene35823 | 0.817651 | 2.95E-52 | -1.69E-46 |
| MS.gene054651 | MS.gene35823 | 0.808564 | 2.91E-50 | -1.69E-46 |
| MS.gene05468 | MS.gene35823 | 0.820436 | 6.86E-53 | -1.69E-46 |
| MS.gene054775 | MS.gene35823 | 0.82671 | 2.34E-54 | -1.69E-46 |
| MS.gene054826 | MS.gene35823 | 0.808974 | 2.38E-50 | -1.69E-46 |
| MS.gene054875 | MS.gene35823 | 0.81086 | 9.34E-51 | -1.69E-46 |
| MS.gene054930 | MS.gene35823 | 0.818563 | 1.84E-52 | -1.69E-46 |
| MS.gene05510 | MS.gene35823 | 0.835961 | 1.24E-56 | -1.69E-46 |
| MS.gene055227 | MS.gene35823 | 0.83992 | 1.19E-57 | -1.69E-46 |
| MS.gene055228 | MS.gene35823 | 0.815957 | 7.08E-52 | -1.69E-46 |
| MS.gene055230 | MS.gene35823 | 0.80455 | 2.05E-49 | -1.69E-46 |
| MS.gene055356 | MS.gene35823 | 0.856369 | 3.37E-62 | -1.69E-46 |
| MS.gene055357 | MS.gene35823 | 0.819076 | 1.40E-52 | -1.69E-46 |
| MS.gene055358 | MS.gene35823 | 0.844626 | 6.73E-59 | -1.69E-46 |
| MS.gene055608 | MS.gene35823 | 0.802519 | 5.40E-49 | -1.69E-46 |
| MS.gene055623 | MS.gene35823 | 0.816276 | 6.01E-52 | -1.69E-46 |
| MS.gene055701 | MS.gene35823 | 0.878307 | 3.12E-69 | -1.69E-46 |
| MS.gene055818 | MS.gene35823 | 0.833899 | 4.09E-56 | -1.69E-46 |
| MS.gene055926 | MS.gene35823 | 0.875662 | 2.58E-68 | -1.69E-46 |
| MS.gene05604 | MS.gene35823 | 0.853352 | 2.53E-61 | -1.69E-46 |
| MS.gene056162 | MS.gene35823 | 0.815254 | 1.02E-51 | -1.69E-46 |
| MS.gene056173 | MS.gene35823 | 0.832638 | 8.43E-56 | -1.69E-46 |
| MS.gene056174 | MS.gene35823 | 0.834071 | 3.70E-56 | -1.69E-46 |
| MS.gene056308 | MS.gene35823 | 0.800162 | 1.64E-48 | -1.69E-46 |
| MS.gene056480 | MS.gene35823 | 0.84123 | 5.39E-58 | -1.69E-46 |
| MS.gene056506 | MS.gene35823 | 0.827795 | 1.28E-54 | -1.69E-46 |
| MS.gene056873 | MS.gene35823 | 0.833419 | 5.39E-56 | -1.69E-46 |
| MS.gene057012 | MS.gene35823 | 0.812224 | 4.72E-51 | -1.69E-46 |
| MS.gene057026 | MS.gene35823 | 0.826024 | 3.40E-54 | -1.69E-46 |
| MS.gene057156 | MS.gene35823 | -0.834783 | 2.45E-56 | -1.69E-46 |
| MS.gene057194 | MS.gene35823 | 0.840045 | 1.10E-57 | -1.69E-46 |
| MS.gene057444 | MS.gene35823 | 0.807161 | 5.79E-50 | -1.69E-46 |
| MS.gene05761 | MS.gene35823 | 0.839828 | 1.25E-57 | -1.69E-46 |
| MS.gene057693 | MS.gene35823 | 0.81153 | 6.69E-51 | -1.69E-46 |
| MS.gene057869 | MS.gene35823 | 0.837414 | 5.27E-57 | -1.69E-46 |
| MS.gene057915 | MS.gene35823 | 0.827817 | 1.27E-54 | -1.69E-46 |
| MS.gene058010 | MS.gene35823 | 0.814119 | 1.81E-51 | -1.69E-46 |
| MS.gene058081 | MS.gene35823 | 0.826173 | 3.14E-54 | -1.69E-46 |
| MS.gene058146 | MS.gene35823 | 0.845658 | 3.54E-59 | -1.69E-46 |
| MS.gene058223 | MS.gene35823 | -0.807963 | 3.91E-50 | -1.69E-46 |
| MS.gene058548 | MS.gene35823 | 0.807175 | 5.75E-50 | -1.69E-46 |
| MS.gene058595 | MS.gene35823 | 0.824065 | 9.88E-54 | -1.69E-46 |
| MS.gene058625 | MS.gene35823 | 0.800103 | 1.69E-48 | -1.69E-46 |
| MS.gene058636 | MS.gene35823 | 0.812528 | 4.05E-51 | -1.69E-46 |
| MS.gene058647 | MS.gene35823 | 0.804037 | 2.62E-49 | -1.69E-46 |
| MS.gene05872 | MS.gene35823 | 0.82663 | 2.44E-54 | -1.69E-46 |
| MS.gene058979 | MS.gene35823 | 0.817228 | 3.68E-52 | -1.69E-46 |
| MS.gene05897 | MS.gene35823 | 0.830241 | 3.28E-55 | -1.69E-46 |
| MS.gene059128 | MS.gene35823 | 0.843415 | 1.42E-58 | -1.69E-46 |
| MS.gene059161 | MS.gene35823 | 0.848878 | 4.63E-60 | -1.69E-46 |
| MS.gene059272 | MS.gene35823 | 0.816328 | 5.85E-52 | -1.69E-46 |
| MS.gene059283 | MS.gene35823 | 0.819328 | 1.23E-52 | -1.69E-46 |
| MS.gene059438 | MS.gene35823 | 0.843159 | 1.66E-58 | -1.69E-46 |
| MS.gene059439 | MS.gene35823 | 0.849262 | 3.62E-60 | -1.69E-46 |
| MS.gene059440 | MS.gene35823 | 0.839126 | 1.91E-57 | -1.69E-46 |
| MS.gene059584 | MS.gene35823 | 0.809413 | 1.92E-50 | -1.69E-46 |
| MS.gene059607 | MS.gene35823 | 0.807125 | 5.89E-50 | -1.69E-46 |
| MS.gene059609 | MS.gene35823 | 0.825966 | 3.51E-54 | -1.69E-46 |
| MS.gene059725 | MS.gene35823 | 0.848351 | 6.48E-60 | -1.69E-46 |
| MS.gene059842 | MS.gene35823 | 0.832041 | 1.19E-55 | -1.69E-46 |
| MS.gene059952 | MS.gene35823 | 0.837685 | 4.49E-57 | -1.69E-46 |
| MS.gene060011 | MS.gene35823 | 0.857316 | 1.77E-62 | -1.69E-46 |
| MS.gene060137 | MS.gene35823 | -0.821499 | 3.91E-53 | -1.69E-46 |
| MS.gene060167 | MS.gene35823 | 0.834426 | 3.02E-56 | -1.69E-46 |
| MS.gene060310 | MS.gene35823 | 0.809277 | 2.05E-50 | -1.69E-46 |
| MS.gene060322 | MS.gene35823 | 0.884693 | 1.54E-71 | -1.69E-46 |
| MS.gene060373 | MS.gene35823 | 0.805349 | 1.39E-49 | -1.69E-46 |
| MS.gene06052 | MS.gene35823 | 0.873804 | 1.11E-67 | -1.69E-46 |
| MS.gene060637 | MS.gene35823 | 0.805171 | 1.52E-49 | -1.69E-46 |
| MS.gene060683 | MS.gene35823 | 0.86318 | 2.99E-64 | -1.69E-46 |
| MS.gene060685 | MS.gene35823 | 0.86559 | 5.29E-65 | -1.69E-46 |
| MS.gene060802 | MS.gene35823 | 0.873649 | 1.25E-67 | -1.69E-46 |
| MS.gene060803 | MS.gene35823 | 0.861406 | 1.05E-63 | -1.69E-46 |
| MS.gene060850 | MS.gene35823 | 0.802771 | 4.79E-49 | -1.69E-46 |
| MS.gene060851 | MS.gene35823 | 0.802976 | 4.34E-49 | -1.69E-46 |
| MS.gene060852 | MS.gene35823 | 0.801922 | 7.16E-49 | -1.69E-46 |
| MS.gene060918 | MS.gene35823 | 0.800525 | 1.38E-48 | -1.69E-46 |
| MS.gene060932 | MS.gene35823 | 0.806629 | 7.50E-50 | -1.69E-46 |
| MS.gene060998 | MS.gene35823 | 0.873152 | 1.83E-67 | -1.69E-46 |
| MS.gene061114 | MS.gene35823 | -0.80307 | 4.15E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35823.t1 | MTR_2g088270 | 98.756 | 402 | 5 | 0 | 1 | 402 | 1 | 402 | 0.0 | 831 |
| MS.gene35823.t1 | MTR_4g048320 | 79.115 | 407 | 80 | 2 | 1 | 402 | 1 | 407 | 0.0 | 699 |
| MS.gene35823.t1 | MTR_4g048320 | 80.882 | 340 | 60 | 2 | 68 | 402 | 10 | 349 | 0.0 | 595 |
| MS.gene35823.t1 | MTR_3g073370 | 61.282 | 390 | 146 | 3 | 15 | 402 | 9 | 395 | 0.0 | 519 |
| MS.gene35823.t1 | MTR_3g073370 | 61.125 | 391 | 146 | 4 | 15 | 402 | 9 | 396 | 0.0 | 515 |
| MS.gene35823.t1 | MTR_4g013305 | 60.101 | 396 | 129 | 4 | 8 | 402 | 11 | 378 | 2.14e-179 | 504 |
| MS.gene35823.t1 | MTR_4g035490 | 54.663 | 386 | 161 | 4 | 16 | 399 | 7 | 380 | 1.12e-160 | 457 |
| MS.gene35823.t1 | MTR_5g009700 | 47.368 | 266 | 132 | 3 | 88 | 352 | 74 | 332 | 2.03e-82 | 256 |
| MS.gene35823.t1 | MTR_5g009700 | 47.826 | 253 | 124 | 3 | 101 | 352 | 1 | 246 | 1.74e-80 | 248 |
| MS.gene35823.t1 | MTR_3g090600 | 48.846 | 260 | 125 | 4 | 94 | 352 | 80 | 332 | 1.77e-80 | 251 |
| MS.gene35823.t1 | MTR_3g090600 | 48.846 | 260 | 123 | 5 | 94 | 352 | 80 | 330 | 7.02e-79 | 247 |
| MS.gene35823.t1 | MTR_1g012800 | 44.318 | 264 | 136 | 5 | 90 | 352 | 83 | 336 | 1.30e-69 | 223 |
| MS.gene35823.t1 | MTR_3g090600 | 48.085 | 235 | 111 | 5 | 94 | 324 | 80 | 307 | 2.22e-64 | 208 |
| MS.gene35823.t1 | MTR_3g090600 | 48.085 | 235 | 109 | 6 | 94 | 324 | 80 | 305 | 7.02e-63 | 204 |
| MS.gene35823.t1 | MTR_8g463930 | 34.340 | 265 | 158 | 7 | 128 | 389 | 77 | 328 | 4.11e-48 | 167 |
| MS.gene35823.t1 | MTR_2g078030 | 33.333 | 267 | 162 | 6 | 125 | 388 | 68 | 321 | 8.73e-47 | 163 |
| MS.gene35823.t1 | MTR_2g078030 | 35.242 | 227 | 140 | 4 | 125 | 349 | 68 | 289 | 5.49e-43 | 153 |
| MS.gene35823.t1 | MTR_5g041210 | 25.769 | 260 | 169 | 6 | 100 | 346 | 343 | 591 | 3.73e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35823.t1 | AT1G05170 | 76.413 | 407 | 91 | 2 | 1 | 402 | 1 | 407 | 0.0 | 676 |
| MS.gene35823.t1 | AT2G32430 | 73.839 | 409 | 100 | 4 | 1 | 402 | 1 | 409 | 0.0 | 620 |
| MS.gene35823.t1 | AT4G26940 | 72.405 | 395 | 102 | 2 | 12 | 402 | 16 | 407 | 0.0 | 603 |
| MS.gene35823.t1 | AT1G05170 | 75.281 | 356 | 84 | 1 | 1 | 352 | 1 | 356 | 0.0 | 585 |
| MS.gene35823.t1 | AT1G11730 | 61.576 | 406 | 128 | 6 | 1 | 401 | 1 | 383 | 0.0 | 520 |
| MS.gene35823.t1 | AT1G32930 | 60.204 | 392 | 150 | 3 | 13 | 402 | 12 | 399 | 1.87e-179 | 505 |
| MS.gene35823.t1 | AT1G77810 | 60.152 | 394 | 136 | 6 | 10 | 399 | 5 | 381 | 1.57e-175 | 494 |
| MS.gene35823.t1 | AT1G77810 | 59.698 | 397 | 136 | 7 | 10 | 399 | 5 | 384 | 2.03e-173 | 489 |
| MS.gene35823.t1 | AT1G33430 | 57.506 | 393 | 155 | 8 | 16 | 402 | 7 | 393 | 1.05e-156 | 447 |
| MS.gene35823.t1 | AT1G22015 | 54.198 | 393 | 167 | 5 | 15 | 402 | 11 | 395 | 1.89e-153 | 439 |
| MS.gene35823.t1 | AT1G33430 | 56.359 | 401 | 155 | 9 | 16 | 402 | 7 | 401 | 2.34e-153 | 439 |
| MS.gene35823.t1 | AT4G26940 | 67.658 | 269 | 80 | 2 | 12 | 276 | 16 | 281 | 1.89e-125 | 365 |
| MS.gene35823.t1 | AT1G33430 | 56.169 | 308 | 124 | 7 | 16 | 318 | 7 | 308 | 2.04e-109 | 324 |
| MS.gene35823.t1 | AT5G53340 | 46.667 | 270 | 130 | 6 | 94 | 361 | 76 | 333 | 1.30e-81 | 254 |
| MS.gene35823.t1 | AT5G53340 | 47.876 | 259 | 125 | 5 | 94 | 350 | 76 | 326 | 1.47e-81 | 254 |
| MS.gene35823.t1 | AT4G32120 | 44.030 | 268 | 138 | 5 | 90 | 356 | 83 | 339 | 5.00e-70 | 224 |
| MS.gene35823.t1 | AT2G25300 | 43.985 | 266 | 133 | 5 | 90 | 352 | 6 | 258 | 8.37e-70 | 221 |
| MS.gene35823.t1 | AT2G25300 | 43.985 | 266 | 133 | 5 | 90 | 352 | 84 | 336 | 8.46e-69 | 221 |
| MS.gene35823.t1 | AT2G26100 | 37.023 | 262 | 147 | 8 | 131 | 388 | 107 | 354 | 5.40e-50 | 173 |
| MS.gene35823.t1 | AT1G53290 | 33.955 | 268 | 161 | 6 | 125 | 389 | 77 | 331 | 1.50e-47 | 166 |
| MS.gene35823.t1 | AT3G14960 | 33.846 | 260 | 156 | 6 | 131 | 387 | 81 | 327 | 2.81e-47 | 165 |
| MS.gene35823.t1 | AT2G26100 | 37.104 | 221 | 132 | 4 | 131 | 349 | 107 | 322 | 8.84e-45 | 159 |
Find 73 sgRNAs with CRISPR-Local
Find 203 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATTAGGAGCTTGGTTTAT+TGG | 0.181423 | 2.1:-13175972 | MS.gene35823:CDS |
| AGACAAGACTATTTCAAATT+TGG | 0.187361 | 2.1:-13177673 | MS.gene35823:CDS |
| ATTATCATCCGCTTTGTAAT+TGG | 0.210456 | 2.1:-13177142 | MS.gene35823:CDS |
| GAACCAGAATACTGGAAATT+TGG | 0.236437 | 2.1:-13176195 | MS.gene35823:CDS |
| TCACCAAATTTCCAGTATTC+TGG | 0.244223 | 2.1:+13176192 | None:intergenic |
| CATGTGTTGCTTCATTTGAT+TGG | 0.320410 | 2.1:-13175442 | MS.gene35823:CDS |
| TTTGTGGAGTGCTTCTTTCT+AGG | 0.339012 | 2.1:-13175345 | None:intergenic |
| ATTTCCAGTATTCTGGTTCA+TGG | 0.346108 | 2.1:+13176199 | None:intergenic |
| GTTGTCCTCGCAAGTCCTTT+AGG | 0.352932 | 2.1:+13177986 | None:intergenic |
| TGCTACTGCTGTTAACTTGT+GGG | 0.357057 | 2.1:-13176682 | MS.gene35823:CDS |
| GACTATTTCAAATTTGGAAA+TGG | 0.359715 | 2.1:-13177667 | MS.gene35823:CDS |
| GCAAATGAGGATGTTTCATT+AGG | 0.363722 | 2.1:-13175987 | MS.gene35823:CDS |
| CTCGCAAGTCCTTTAGGTTC+AGG | 0.363890 | 2.1:+13177992 | None:intergenic |
| AGAAGGTACCTAATGGTTAT+AGG | 0.369031 | 2.1:-13177555 | MS.gene35823:CDS |
| TTGTCTTTGCTGATAATTCA+AGG | 0.373953 | 2.1:+13176715 | None:intergenic |
| ATCTTCATATCTTCTGATAC+AGG | 0.403107 | 2.1:+13177597 | None:intergenic |
| ACATGGAGATTTCCTGAGAT+TGG | 0.407780 | 2.1:-13176858 | MS.gene35823:intron |
| GAGATTCCGTTCGCGCCACT+TGG | 0.410674 | 2.1:-13177500 | MS.gene35823:CDS |
| TGAGAAAAGAAAGAAGTTAG+AGG | 0.413201 | 2.1:-13177176 | MS.gene35823:CDS |
| TGTTAATTCCTATAACCATT+AGG | 0.414080 | 2.1:+13177547 | None:intergenic |
| TACTGGAAATTTGGTGAGAC+AGG | 0.417346 | 2.1:-13176186 | MS.gene35823:CDS |
| TACATCGGATGCATGAAATC+TGG | 0.429775 | 2.1:-13176356 | MS.gene35823:CDS |
| GGACATGCAGTGGAATTTGT+AGG | 0.432142 | 2.1:-13175421 | MS.gene35823:CDS |
| GTTAACAGCAGTAGCAAAGT+AGG | 0.436177 | 2.1:+13176689 | None:intergenic |
| CTGCCTCAATAGCTCGATCT+AGG | 0.448168 | 2.1:+13176891 | None:intergenic |
| AAAGAAGTTAGAGGAAGAGA+AGG | 0.449533 | 2.1:-13177167 | MS.gene35823:CDS |
| GATGATGTTCATGTAAATAT+AGG | 0.452270 | 2.1:-13176633 | MS.gene35823:intron |
| GGTACCATGAACCAGAATAC+TGG | 0.454852 | 2.1:-13176203 | MS.gene35823:CDS |
| AGGATGTTTCATTAGGAGCT+TGG | 0.461834 | 2.1:-13175980 | MS.gene35823:CDS |
| ATCCGCTTTGTAATTGGTCA+TGG | 0.467305 | 2.1:-13177136 | MS.gene35823:CDS |
| AGATAAGTGAATCAACTGTT+AGG | 0.471693 | 2.1:-13177578 | MS.gene35823:CDS |
| AGACTATGCTGTGGTACAAC+AGG | 0.477338 | 2.1:-13175921 | MS.gene35823:intron |
| AAGTGATCATTACCAATCTC+AGG | 0.483099 | 2.1:+13176846 | None:intergenic |
| TTGCTACTGCTGTTAACTTG+TGG | 0.487451 | 2.1:-13176683 | MS.gene35823:CDS |
| TGTATTGGAAGCTTCTGTGC+TGG | 0.490184 | 2.1:-13179206 | MS.gene35823:CDS |
| AAAATTCTTGCAGAGGAGTA+AGG | 0.491081 | 2.1:-13176224 | MS.gene35823:intron |
| TGGCATCCAAGTGGCGCGAA+CGG | 0.528936 | 2.1:+13177494 | None:intergenic |
| TGTTAGGAGAAGGTACCTAA+TGG | 0.531626 | 2.1:-13177562 | MS.gene35823:CDS |
| GAGAAGGTGAGAAAGCTTTG+TGG | 0.536239 | 2.1:-13175361 | MS.gene35823:CDS |
| CGCGCCACTTGGATGCCACA+AGG | 0.537211 | 2.1:-13177489 | MS.gene35823:intron |
| AAGTACTTTCGTCATGCGAC+AGG | 0.539105 | 2.1:-13176159 | MS.gene35823:CDS |
| TTCTCTAGTGCCACGACAGG+TGG | 0.546041 | 2.1:-13176917 | MS.gene35823:intron |
| TCCATCATGCAGATTGTGAA+TGG | 0.546325 | 2.1:-13175484 | MS.gene35823:intron |
| TGGACTATTCCTGAACCTAA+AGG | 0.548621 | 2.1:-13178001 | MS.gene35823:CDS |
| TCCGCTTTGTAATTGGTCAT+GGG | 0.549475 | 2.1:-13177135 | MS.gene35823:intron |
| AAGAAGTTAGAGGAAGAGAA+GGG | 0.551717 | 2.1:-13177166 | MS.gene35823:CDS |
| ATTGTGCAGGATCATGTTGA+AGG | 0.557008 | 2.1:-13176741 | MS.gene35823:intron |
| TTGGTTTATTGGTCTTGATG+TGG | 0.560157 | 2.1:-13175961 | MS.gene35823:CDS |
| CCTTTCTCTAGTGCCACGAC+AGG | 0.562439 | 2.1:-13176920 | MS.gene35823:intron |
| TCTTCACAAGTATGCAAATG+AGG | 0.564981 | 2.1:-13176000 | MS.gene35823:CDS |
| TATCCTAGATCGAGCTATTG+AGG | 0.566969 | 2.1:-13176894 | MS.gene35823:CDS |
| CAATTAAATTTAGTTACAGA+GGG | 0.567403 | 2.1:-13177947 | MS.gene35823:CDS |
| AAGCAAATAAAGCTATGACT+TGG | 0.572489 | 2.1:-13179289 | None:intergenic |
| CGGATGCATGAAATCTGGAC+CGG | 0.576274 | 2.1:-13176351 | MS.gene35823:CDS |
| TCATGCAGATTGTGAATGGA+AGG | 0.579298 | 2.1:-13175480 | MS.gene35823:intron |
| TCATTTGATTGGACATGCAG+TGG | 0.579796 | 2.1:-13175431 | MS.gene35823:CDS |
| TGTGAATGGAAGGCTCAAGC+GGG | 0.589727 | 2.1:-13175470 | MS.gene35823:CDS |
| TCTTCTTTAGTTGCAAGAGA+AGG | 0.590624 | 2.1:-13177836 | MS.gene35823:intron |
| GTGAATCAACTGTTAGGAGA+AGG | 0.596720 | 2.1:-13177572 | MS.gene35823:CDS |
| ACAATTAAATTTAGTTACAG+AGG | 0.607776 | 2.1:-13177948 | MS.gene35823:CDS |
| TTGTGAATGGAAGGCTCAAG+CGG | 0.615812 | 2.1:-13175471 | MS.gene35823:CDS |
| ATGCATCCGATGTATACTCG+TGG | 0.617141 | 2.1:+13176365 | None:intergenic |
| ACTTGCGAGGACAACAGCAA+TGG | 0.618474 | 2.1:-13177978 | MS.gene35823:CDS |
| GCTATGACTTGGAAAAGTAG+AGG | 0.624639 | 2.1:-13179278 | MS.gene35823:CDS |
| GACTTGGAAAAGTAGAGGAG+AGG | 0.626837 | 2.1:-13179273 | MS.gene35823:CDS |
| ATCTAGGATACCACCTGTCG+TGG | 0.640845 | 2.1:+13176907 | None:intergenic |
| GAGGCAGAAGATAGTAAACA+TGG | 0.646324 | 2.1:-13176875 | MS.gene35823:CDS |
| GAAGTGAAGCGCGATACGAA+AGG | 0.667111 | 2.1:-13177814 | MS.gene35823:CDS |
| ACCCATGACCAATTACAAAG+CGG | 0.684488 | 2.1:+13177134 | None:intergenic |
| GATGATCGTAGACTATGCTG+TGG | 0.703632 | 2.1:-13175930 | MS.gene35823:CDS |
| TGAACCTTGTGGCATCCAAG+TGG | 0.703947 | 2.1:+13177485 | None:intergenic |
| GCAAAACCACGAGTATACAT+CGG | 0.705929 | 2.1:-13176371 | MS.gene35823:CDS |
| CTGAACCTAAAGGACTTGCG+AGG | 0.714939 | 2.1:-13177991 | MS.gene35823:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATACAAATAAAAATTATATC+TGG | - | chr2.1:13178763-13178782 | MS.gene35823:intron | 10.0% |
| !! | TAAAACAAATAAAGATTTAT+AGG | + | chr2.1:13179082-13179101 | None:intergenic | 10.0% |
| !! | TTATTAAACTCAAAAATATA+AGG | + | chr2.1:13177179-13177198 | None:intergenic | 10.0% |
| !!! | ATAATTTTAAATTCTTGAAT+TGG | - | chr2.1:13179114-13179133 | MS.gene35823:intron | 10.0% |
| !!! | ATCACTATTTTATAATAATT+AGG | + | chr2.1:13176343-13176362 | None:intergenic | 10.0% |
| !!! | ATTTTTTATATAAGCTATAT+AGG | - | chr2.1:13178038-13178057 | MS.gene35823:intron | 10.0% |
| !! | AATCAATCATCTATTAATAT+AGG | + | chr2.1:13178738-13178757 | None:intergenic | 15.0% |
| !! | TATAATTGAAGTGAAATTAA+TGG | - | chr2.1:13178572-13178591 | MS.gene35823:intron | 15.0% |
| !! | TGAGATTATATATATGATAA+TGG | + | chr2.1:13176181-13176200 | None:intergenic | 15.0% |
| !! | TTAAATAAAAAGATGGATAA+AGG | + | chr2.1:13178323-13178342 | None:intergenic | 15.0% |
| !! | TTTAAACCAAAAATTGTTAA+TGG | + | chr2.1:13175951-13175970 | None:intergenic | 15.0% |
| !!! | TAGAAAAATCAAGTTTTTAT+TGG | + | chr2.1:13175780-13175799 | None:intergenic | 15.0% |
| !!! | TCTTTTGTTAAATAAAAAGA+TGG | + | chr2.1:13178330-13178349 | None:intergenic | 15.0% |
| !!! | TTTGATGTTTTATTTAACAT+AGG | - | chr2.1:13176389-13176408 | MS.gene35823:CDS | 15.0% |
| !! | AAAAGACCTAAAAAATAAGT+TGG | + | chr2.1:13176369-13176388 | None:intergenic | 20.0% |
| !! | AATAGTATGATATGATAAGA+TGG | + | chr2.1:13177246-13177265 | None:intergenic | 20.0% |
| !! | ACAATTAAATTTAGTTACAG+AGG | - | chr2.1:13176673-13176692 | MS.gene35823:CDS | 20.0% |
| !! | ATAAGATGGTAATATATGAA+TGG | + | chr2.1:13177232-13177251 | None:intergenic | 20.0% |
| !! | CAATCATCAATAAAAAAAAC+AGG | + | chr2.1:13175498-13175517 | None:intergenic | 20.0% |
| !! | CAATTAAATTTAGTTACAGA+GGG | - | chr2.1:13176674-13176693 | MS.gene35823:CDS | 20.0% |
| !! | GAGTACAATAATAGAATTTA+GGG | + | chr2.1:13179043-13179062 | None:intergenic | 20.0% |
| !! | GGAACTAAATTCATAAAAAT+TGG | + | chr2.1:13175690-13175709 | None:intergenic | 20.0% |
| !! | TCAATGAAAAACAAAGTTTA+AGG | + | chr2.1:13175663-13175682 | None:intergenic | 20.0% |
| !! | TGAGTACAATAATAGAATTT+AGG | + | chr2.1:13179044-13179063 | None:intergenic | 20.0% |
| !!! | AAAAATCAAGTTTTTATTGG+TGG | + | chr2.1:13175777-13175796 | None:intergenic | 20.0% |
| !!! | ATAGATGGATCTTTTATTTT+TGG | - | chr2.1:13176311-13176330 | MS.gene35823:intron | 20.0% |
| !!! | ATGTTTTATTTAACATAGGA+TGG | - | chr2.1:13176393-13176412 | MS.gene35823:CDS | 20.0% |
| !!! | TAGATGGATCTTTTATTTTT+GGG | - | chr2.1:13176312-13176331 | MS.gene35823:intron | 20.0% |
| !!! | TGTAATATAAGATTTTCATG+TGG | + | chr2.1:13176419-13176438 | None:intergenic | 20.0% |
| !!! | TTTAAGCCATTAACAATTTT+TGG | - | chr2.1:13175942-13175961 | MS.gene35823:CDS | 20.0% |
| !!! | TTTATAAACTATTGATTCTC+TGG | - | chr2.1:13177403-13177422 | MS.gene35823:intron | 20.0% |
| !!! | TTTTTTACTTCATAAGTAAG+AGG | + | chr2.1:13178552-13178571 | None:intergenic | 20.0% |
| ! | AAGAAATTTATATGTGTGAC+AGG | - | chr2.1:13176594-13176613 | MS.gene35823:intron | 25.0% |
| ! | AATTGAGAGATATTAAGATG+AGG | + | chr2.1:13176045-13176064 | None:intergenic | 25.0% |
| ! | ACGTATGTGTAAAATGTTAT+CGG | + | chr2.1:13177209-13177228 | None:intergenic | 25.0% |
| ! | AGACAAGACTATTTCAAATT+TGG | - | chr2.1:13176948-13176967 | MS.gene35823:intron | 25.0% |
| ! | GACTATTTCAAATTTGGAAA+TGG | - | chr2.1:13176954-13176973 | MS.gene35823:intron | 25.0% |
| ! | GATGATGTTCATGTAAATAT+AGG | - | chr2.1:13177988-13178007 | MS.gene35823:CDS | 25.0% |
| ! | TATATAATCTCACTCATCAA+TGG | - | chr2.1:13176189-13176208 | MS.gene35823:CDS | 25.0% |
| ! | TGTTAATTCCTATAACCATT+AGG | + | chr2.1:13177077-13177096 | None:intergenic | 25.0% |
| ! | TTCTGATGGAACATAAAATA+GGG | + | chr2.1:13175880-13175899 | None:intergenic | 25.0% |
| ! | TTGCTGAAAATAGATTGAAT+TGG | + | chr2.1:13178201-13178220 | None:intergenic | 25.0% |
| ! | TTTCGAAGAGATTATAGAAA+CGG | + | chr2.1:13178123-13178142 | None:intergenic | 25.0% |
| !! | TTGAAATGTTGATAGATAGA+TGG | - | chr2.1:13176296-13176315 | MS.gene35823:intron | 25.0% |
| !! | TTTTGTGAACATTTAATCAC+TGG | - | chr2.1:13176063-13176082 | MS.gene35823:intron | 25.0% |
| !!! | GATAGTCCAACTTATTTTTT+AGG | - | chr2.1:13176360-13176379 | MS.gene35823:CDS | 25.0% |
| !!! | TTTTTAAGCTTAGAAAACCA+TGG | + | chr2.1:13175537-13175556 | None:intergenic | 25.0% |
| AAAAACACCACAATAACTCA+AGG | + | chr2.1:13176569-13176588 | None:intergenic | 30.0% | |
| AAAGAAGTCCACAAAAAATG+TGG | - | chr2.1:13179238-13179257 | MS.gene35823:CDS | 30.0% | |
| AAGAAAATTCATGTACCTGT+TGG | + | chr2.1:13175452-13175471 | None:intergenic | 30.0% | |
| AATTCATTATTAGGTGTCAG+AGG | + | chr2.1:13176224-13176243 | None:intergenic | 30.0% | |
| ACTAAACTCGAGATAGTTAT+AGG | + | chr2.1:13177550-13177569 | None:intergenic | 30.0% | |
| AGATAAGTGAATCAACTGTT+AGG | - | chr2.1:13177043-13177062 | MS.gene35823:intron | 30.0% | |
| AGATGTGCCAATTCATTATT+AGG | + | chr2.1:13176233-13176252 | None:intergenic | 30.0% | |
| ATCCATTTCATTTCTTCTGA+TGG | + | chr2.1:13175894-13175913 | None:intergenic | 30.0% | |
| ATCTTCATATCTTCTGATAC+AGG | + | chr2.1:13177027-13177046 | None:intergenic | 30.0% | |
| ATTATCATCCGCTTTGTAAT+TGG | - | chr2.1:13177479-13177498 | MS.gene35823:intron | 30.0% | |
| CATATTTCCATAAATTCTCG+TGG | + | chr2.1:13178071-13178090 | None:intergenic | 30.0% | |
| CTTCTGATGGAACATAAAAT+AGG | + | chr2.1:13175881-13175900 | None:intergenic | 30.0% | |
| GGAACTAAGCTCATAAAAAT+TGG | + | chr2.1:13175810-13175829 | None:intergenic | 30.0% | |
| GTTATATGTAACTCACTGTA+TGG | + | chr2.1:13176853-13176872 | None:intergenic | 30.0% | |
| TATTGGTGGAACATAAGATA+GGG | + | chr2.1:13175763-13175782 | None:intergenic | 30.0% | |
| TCATAAGTAAGAGGAAAAAG+TGG | + | chr2.1:13178543-13178562 | None:intergenic | 30.0% | |
| TCTGACACCTAATAATGAAT+TGG | - | chr2.1:13176223-13176242 | MS.gene35823:intron | 30.0% | |
| TCTGATGGAACATAAAATAG+GGG | + | chr2.1:13175879-13175898 | None:intergenic | 30.0% | |
| TGACTCAAATGAATTAGCAA+TGG | + | chr2.1:13175623-13175642 | None:intergenic | 30.0% | |
| TGAGAAAAGAAAGAAGTTAG+AGG | - | chr2.1:13177445-13177464 | MS.gene35823:intron | 30.0% | |
| TGCTAATTCATTTGAGTCAT+TGG | - | chr2.1:13175624-13175643 | MS.gene35823:intron | 30.0% | |
| TTATTGGTGGAACATAAGAT+AGG | + | chr2.1:13175764-13175783 | None:intergenic | 30.0% | |
| TTCCATCAGAAGAAATGAAA+TGG | - | chr2.1:13175889-13175908 | MS.gene35823:intron | 30.0% | |
| TTGAAACTATAGAGATGAGA+TGG | + | chr2.1:13177516-13177535 | None:intergenic | 30.0% | |
| TTGTCTTTGCTGATAATTCA+AGG | + | chr2.1:13177909-13177928 | None:intergenic | 30.0% | |
| TTTGTTTCCACGAGAATTTA+TGG | - | chr2.1:13178061-13178080 | MS.gene35823:intron | 30.0% | |
| ! | AATCTATTTTCAGCAACACT+CGG | - | chr2.1:13178205-13178224 | MS.gene35823:intron | 30.0% |
| ! | GAAGCTTTATGTCTCAAAAA+TGG | - | chr2.1:13175380-13175399 | MS.gene35823:CDS | 30.0% |
| ! | TGGATCTGAAATGAATTGAT+TGG | - | chr2.1:13175909-13175928 | MS.gene35823:intron | 30.0% |
| ! | TGGATGATTTTCTTGTGTAT+TGG | - | chr2.1:13175400-13175419 | MS.gene35823:CDS | 30.0% |
| !! | GCTTTATTATGTGTTTTCCA+TGG | - | chr2.1:13175517-13175536 | MS.gene35823:intron | 30.0% |
| !! | GTATGATCCTATTGATTTGA+AGG | - | chr2.1:13177818-13177837 | MS.gene35823:CDS | 30.0% |
| !! | TAGAATTGACTTGACATTGA+GGG | + | chr2.1:13175998-13176017 | None:intergenic | 30.0% |
| !! | TCATAAGAGTATTCTATCAC+TGG | - | chr2.1:13175593-13175612 | MS.gene35823:intron | 30.0% |
| !!! | AATTTGTGTTTTGATTGTGC+AGG | - | chr2.1:13177867-13177886 | MS.gene35823:intron | 30.0% |
| !!! | TTTTGAGACATAAAGCTTCT+AGG | + | chr2.1:13175379-13175398 | None:intergenic | 30.0% |
| AAAATTCTTGCAGAGGAGTA+AGG | - | chr2.1:13178397-13178416 | MS.gene35823:intron | 35.0% | |
| AAAGAAGTTAGAGGAAGAGA+AGG | - | chr2.1:13177454-13177473 | MS.gene35823:intron | 35.0% | |
| AAAGTGTGCACAAGAATAGA+AGG | + | chr2.1:13177386-13177405 | None:intergenic | 35.0% | |
| AAGAAGTTAGAGGAAGAGAA+GGG | - | chr2.1:13177455-13177474 | MS.gene35823:intron | 35.0% | |
| AAGTGATCATTACCAATCTC+AGG | + | chr2.1:13177778-13177797 | None:intergenic | 35.0% | |
| ACATGTCAAAATTCTTGCAG+AGG | - | chr2.1:13178390-13178409 | MS.gene35823:intron | 35.0% | |
| AGATAGGGTGAGAAAGTTTA+AGG | + | chr2.1:13175748-13175767 | None:intergenic | 35.0% | |
| CTGATGGAACATAAAATAGG+GGG | + | chr2.1:13175878-13175897 | None:intergenic | 35.0% | |
| CTTTCCTCCTTCAAATCAAT+AGG | + | chr2.1:13177828-13177847 | None:intergenic | 35.0% | |
| GAACCAGAATACTGGAAATT+TGG | - | chr2.1:13178426-13178445 | MS.gene35823:intron | 35.0% | |
| GAGAGATATTAAGATGAGGT+TGG | + | chr2.1:13176041-13176060 | None:intergenic | 35.0% | |
| GCAAATGAGGATGTTTCATT+AGG | - | chr2.1:13178634-13178653 | MS.gene35823:intron | 35.0% | |
| TCACCAAATTTCCAGTATTC+TGG | + | chr2.1:13178432-13178451 | None:intergenic | 35.0% | |
| TCATTAGGAGCTTGGTTTAT+TGG | - | chr2.1:13178649-13178668 | MS.gene35823:intron | 35.0% | |
| TCTTCACAAGTATGCAAATG+AGG | - | chr2.1:13178621-13178640 | MS.gene35823:intron | 35.0% | |
| TCTTCTTTAGTTGCAAGAGA+AGG | - | chr2.1:13176785-13176804 | MS.gene35823:intron | 35.0% | |
| TGATCGAATTATGAACCTTG+TGG | + | chr2.1:13177150-13177169 | None:intergenic | 35.0% | |
| TTTATATGTGTGACAGGATG+TGG | - | chr2.1:13176600-13176619 | MS.gene35823:intron | 35.0% | |
| ! | ACTTAAAACCCAACTTGCTT+GGG | - | chr2.1:13178932-13178951 | MS.gene35823:intron | 35.0% |
| !! | AGAAGGTACCTAATGGTTAT+AGG | - | chr2.1:13177066-13177085 | MS.gene35823:intron | 35.0% |
| !! | ATTTCCAGTATTCTGGTTCA+TGG | + | chr2.1:13178425-13178444 | None:intergenic | 35.0% |
| !! | CATGTGTTGCTTCATTTGAT+TGG | - | chr2.1:13179179-13179198 | MS.gene35823:intron | 35.0% |
| !! | CTAGAATTGACTTGACATTG+AGG | + | chr2.1:13175999-13176018 | None:intergenic | 35.0% |
| !! | TGATCCTATTGATTTGAAGG+AGG | - | chr2.1:13177821-13177840 | MS.gene35823:CDS | 35.0% |
| !! | TTGGTTTATTGGTCTTGATG+TGG | - | chr2.1:13178660-13178679 | MS.gene35823:intron | 35.0% |
| ACATGGAGATTTCCTGAGAT+TGG | - | chr2.1:13177763-13177782 | MS.gene35823:intron | 40.0% | |
| ACCCATGACCAATTACAAAG+CGG | + | chr2.1:13177490-13177509 | None:intergenic | 40.0% | |
| ACTTAAACCCCAAGCAAGTT+GGG | + | chr2.1:13178943-13178962 | None:intergenic | 40.0% | |
| AGCCCTTAGGAATGTATTGA+CGG | + | chr2.1:13178790-13178809 | None:intergenic | 40.0% | |
| AGGATGTTTCATTAGGAGCT+TGG | - | chr2.1:13178641-13178660 | MS.gene35823:intron | 40.0% | |
| ATCCGCTTTGTAATTGGTCA+TGG | - | chr2.1:13177485-13177504 | MS.gene35823:intron | 40.0% | |
| ATTGTGCAGGATCATGTTGA+AGG | - | chr2.1:13177880-13177899 | MS.gene35823:intron | 40.0% | |
| CATGGTACCTTGAGTTATTG+TGG | - | chr2.1:13176559-13176578 | MS.gene35823:intron | 40.0% | |
| CCTTGAGAATGATCCAAAAG+GGG | + | chr2.1:13179000-13179019 | None:intergenic | 40.0% | |
| GACCGTCAATACATTCCTAA+GGG | - | chr2.1:13178785-13178804 | MS.gene35823:intron | 40.0% | |
| GAGGCAGAAGATAGTAAACA+TGG | - | chr2.1:13177746-13177765 | MS.gene35823:intron | 40.0% | |
| GCAAAACCACGAGTATACAT+CGG | - | chr2.1:13178250-13178269 | MS.gene35823:intron | 40.0% | |
| GCCTTGAGAATGATCCAAAA+GGG | + | chr2.1:13179001-13179020 | None:intergenic | 40.0% | |
| GGACTTTGTGTGTATGTGTT+AGG | - | chr2.1:13178593-13178612 | MS.gene35823:intron | 40.0% | |
| GGGTATTTATAGCGCTTTGT+GGG | + | chr2.1:13178980-13178999 | None:intergenic | 40.0% | |
| GTCCACAAAAAATGTGGAGA+AGG | - | chr2.1:13179244-13179263 | MS.gene35823:CDS | 40.0% | |
| GTGAATCAACTGTTAGGAGA+AGG | - | chr2.1:13177049-13177068 | MS.gene35823:intron | 40.0% | |
| GTTAACAGCAGTAGCAAAGT+AGG | + | chr2.1:13177935-13177954 | None:intergenic | 40.0% | |
| TACATCGGATGCATGAAATC+TGG | - | chr2.1:13178265-13178284 | MS.gene35823:intron | 40.0% | |
| TATCCTAGATCGAGCTATTG+AGG | - | chr2.1:13177727-13177746 | MS.gene35823:intron | 40.0% | |
| TCATGCAGATTGTGAATGGA+AGG | - | chr2.1:13179141-13179160 | MS.gene35823:intron | 40.0% | |
| TCATTTGATTGGACATGCAG+TGG | - | chr2.1:13179190-13179209 | MS.gene35823:CDS | 40.0% | |
| TCCATCATGCAGATTGTGAA+TGG | - | chr2.1:13179137-13179156 | MS.gene35823:intron | 40.0% | |
| TCCATTCACAATCTGCATGA+TGG | + | chr2.1:13179141-13179160 | None:intergenic | 40.0% | |
| TCCGCTTTGTAATTGGTCAT+GGG | - | chr2.1:13177486-13177505 | MS.gene35823:intron | 40.0% | |
| TCTAGATTGCTAGCTAGTTG+AGG | + | chr2.1:13178889-13178908 | None:intergenic | 40.0% | |
| TGCCTTGAGAATGATCCAAA+AGG | + | chr2.1:13179002-13179021 | None:intergenic | 40.0% | |
| TGGACTATTCCTGAACCTAA+AGG | - | chr2.1:13176620-13176639 | MS.gene35823:intron | 40.0% | |
| TTGATTCTCTGGTGACATCT+TGG | - | chr2.1:13177414-13177433 | MS.gene35823:intron | 40.0% | |
| ! | AGCGCTATAAATACCCCTTT+TGG | - | chr2.1:13178984-13179003 | MS.gene35823:intron | 40.0% |
| ! | CACAATAACTCAAGGTACCA+TGG | + | chr2.1:13176561-13176580 | None:intergenic | 40.0% |
| ! | CTGGAATGTTTTTCACCAAC+AGG | - | chr2.1:13175434-13175453 | MS.gene35823:CDS | 40.0% |
| ! | CTTAAAACCCAACTTGCTTG+GGG | - | chr2.1:13178933-13178952 | MS.gene35823:intron | 40.0% |
| ! | GACTTAAAACCCAACTTGCT+TGG | - | chr2.1:13178931-13178950 | MS.gene35823:intron | 40.0% |
| ! | GCTCAAGAGTCTCTAAAAAG+TGG | - | chr2.1:13176997-13177016 | MS.gene35823:intron | 40.0% |
| ! | GCTTTGTTACCAACTTACCA+TGG | - | chr2.1:13176541-13176560 | MS.gene35823:intron | 40.0% |
| ! | TACTGGAAATTTGGTGAGAC+AGG | - | chr2.1:13178435-13178454 | MS.gene35823:intron | 40.0% |
| ! | TTGCTACTGCTGTTAACTTG+TGG | - | chr2.1:13177938-13177957 | MS.gene35823:CDS | 40.0% |
| !! | TCTCACTTTTGAGCAAGAAC+CGG | + | chr2.1:13178292-13178311 | None:intergenic | 40.0% |
| !! | TGCTACTGCTGTTAACTTGT+GGG | - | chr2.1:13177939-13177958 | MS.gene35823:CDS | 40.0% |
| !! | TGTTAGGAGAAGGTACCTAA+TGG | - | chr2.1:13177059-13177078 | MS.gene35823:intron | 40.0% |
| !!! | CACCTTCTCCACATTTTTTG+TGG | + | chr2.1:13179249-13179268 | None:intergenic | 40.0% |
| AAGTACTTTCGTCATGCGAC+AGG | - | chr2.1:13178462-13178481 | MS.gene35823:intron | 45.0% | |
| AGACTATGCTGTGGTACAAC+AGG | - | chr2.1:13178700-13178719 | MS.gene35823:intron | 45.0% | |
| AGATTGCTAGCTAGTTGAGG+AGG | + | chr2.1:13178886-13178905 | None:intergenic | 45.0% | |
| ATGCATCCGATGTATACTCG+TGG | + | chr2.1:13178259-13178278 | None:intergenic | 45.0% | |
| CTGGTGACATCTTGGAAAAC+AGG | - | chr2.1:13177422-13177441 | MS.gene35823:intron | 45.0% | |
| GACTTAAACCCCAAGCAAGT+TGG | + | chr2.1:13178944-13178963 | None:intergenic | 45.0% | |
| GACTTGGAAAAGTAGAGGAG+AGG | - | chr2.1:13175348-13175367 | MS.gene35823:CDS | 45.0% | |
| GAGAAGGTGAGAAAGCTTTG+TGG | - | chr2.1:13179260-13179279 | MS.gene35823:CDS | 45.0% | |
| GATGATCGTAGACTATGCTG+TGG | - | chr2.1:13178691-13178710 | MS.gene35823:intron | 45.0% | |
| GGACATGCAGTGGAATTTGT+AGG | - | chr2.1:13179200-13179219 | MS.gene35823:CDS | 45.0% | |
| GGACCGTCAATACATTCCTA+AGG | - | chr2.1:13178784-13178803 | MS.gene35823:intron | 45.0% | |
| GGTACCATGAACCAGAATAC+TGG | - | chr2.1:13178418-13178437 | MS.gene35823:intron | 45.0% | |
| TGTATTGGAAGCTTCTGTGC+TGG | - | chr2.1:13175415-13175434 | MS.gene35823:CDS | 45.0% | |
| TTGTGAATGGAAGGCTCAAG+CGG | - | chr2.1:13179150-13179169 | MS.gene35823:intron | 45.0% | |
| ! | AATGCCCTCTAGAAAGGCTT+AGG | - | chr2.1:13178812-13178831 | MS.gene35823:intron | 45.0% |
| ! | CCCCTTTTGGATCATTCTCA+AGG | - | chr2.1:13178997-13179016 | MS.gene35823:intron | 45.0% |
| ! | CTCAAGGTACCATGGTAAGT+TGG | + | chr2.1:13176553-13176572 | None:intergenic | 45.0% |
| ! | GGGGTATTTATAGCGCTTTG+TGG | + | chr2.1:13178981-13179000 | None:intergenic | 45.0% |
| !! | AAAAATCATATAATATTTAA+AGG | + | chr2.1:13175711-13175730 | None:intergenic | 5.0% |
| !! | TTAAAAATCATATAATATAA+AGG | + | chr2.1:13175831-13175850 | None:intergenic | 5.0% |
| !!! | TATTTTTTTTAGTATATATT+TGG | - | chr2.1:13175557-13175576 | MS.gene35823:intron | 5.0% |
| ACTTGCGAGGACAACAGCAA+TGG | - | chr2.1:13176643-13176662 | MS.gene35823:CDS | 50.0% | |
| CGGATGCATGAAATCTGGAC+CGG | - | chr2.1:13178270-13178289 | MS.gene35823:intron | 50.0% | |
| CTGAACCTAAAGGACTTGCG+AGG | - | chr2.1:13176630-13176649 | MS.gene35823:intron | 50.0% | |
| CTGCCTCAATAGCTCGATCT+AGG | + | chr2.1:13177733-13177752 | None:intergenic | 50.0% | |
| GAAGTGAAGCGCGATACGAA+AGG | - | chr2.1:13176807-13176826 | MS.gene35823:intron | 50.0% | |
| GTTGTCCTCGCAAGTCCTTT+AGG | + | chr2.1:13176638-13176657 | None:intergenic | 50.0% | |
| TGAACCTTGTGGCATCCAAG+TGG | + | chr2.1:13177139-13177158 | None:intergenic | 50.0% | |
| TGTGAATGGAAGGCTCAAGC+GGG | - | chr2.1:13179151-13179170 | MS.gene35823:intron | 50.0% | |
| ! | ATCTAGGATACCACCTGTCG+TGG | + | chr2.1:13177717-13177736 | None:intergenic | 50.0% |
| ! | CTCGCAAGTCCTTTAGGTTC+AGG | + | chr2.1:13176632-13176651 | None:intergenic | 50.0% |
| CCTGTCGTGGCACTAGAGAA+AGG | + | chr2.1:13177704-13177723 | None:intergenic | 55.0% | |
| CCTTTCTCTAGTGCCACGAC+AGG | - | chr2.1:13177701-13177720 | MS.gene35823:intron | 55.0% | |
| GGCGCCTAAGCCTTTCTAGA+GGG | + | chr2.1:13178819-13178838 | None:intergenic | 55.0% | |
| TTCTCTAGTGCCACGACAGG+TGG | - | chr2.1:13177704-13177723 | MS.gene35823:intron | 55.0% | |
| ! | GGCTCGAATGCCCTCTAGAA+AGG | - | chr2.1:13178806-13178825 | MS.gene35823:intron | 55.0% |
| !! | TAGAGGGCATTCGAGCCCTT+AGG | + | chr2.1:13178803-13178822 | None:intergenic | 55.0% |
| CAGAAGGGCTCCTGAGGCAT+AGG | - | chr2.1:13178842-13178861 | MS.gene35823:intron | 60.0% | |
| CTATGCCTCAGGAGCCCTTC+TGG | + | chr2.1:13178844-13178863 | None:intergenic | 60.0% | |
| GAGATTCCGTTCGCGCCACT+TGG | - | chr2.1:13177121-13177140 | MS.gene35823:intron | 60.0% | |
| GGGCGCCTAAGCCTTTCTAG+AGG | + | chr2.1:13178820-13178839 | None:intergenic | 60.0% | |
| TGGCATCCAAGTGGCGCGAA+CGG | + | chr2.1:13177130-13177149 | None:intergenic | 60.0% | |
| !! | TTGAGGAGGCGCCTCTGGAA+GGG | + | chr2.1:13178872-13178891 | None:intergenic | 60.0% |
| AGGCTTAGGCGCCCTCCAGA+AGG | - | chr2.1:13178826-13178845 | MS.gene35823:intron | 65.0% | |
| CGCGCCACTTGGATGCCACA+AGG | - | chr2.1:13177132-13177151 | MS.gene35823:intron | 65.0% | |
| GCCTCAGGAGCCCTTCTGGA+GGG | + | chr2.1:13178840-13178859 | None:intergenic | 65.0% | |
| GGCTTAGGCGCCCTCCAGAA+GGG | - | chr2.1:13178827-13178846 | MS.gene35823:intron | 65.0% | |
| TGCCTCAGGAGCCCTTCTGG+AGG | + | chr2.1:13178841-13178860 | None:intergenic | 65.0% | |
| !! | GCTAGTTGAGGAGGCGCCTC+TGG | + | chr2.1:13178877-13178896 | None:intergenic | 65.0% |
| !! | GTTGAGGAGGCGCCTCTGGA+AGG | + | chr2.1:13178873-13178892 | None:intergenic | 65.0% |
| GCATAGGCGCGCCCTTCCAG+AGG | - | chr2.1:13178858-13178877 | MS.gene35823:intron | 70.0% | |
| GCCCTCCAGAAGGGCTCCTG+AGG | - | chr2.1:13178836-13178855 | MS.gene35823:intron | 70.0% | |
| ! | GAAGGGCGCGCCTATGCCTC+AGG | + | chr2.1:13178855-13178874 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.1 | gene | 13175346 | 13179297 | 13175346 | ID=MS.gene35823 |
| chr2.1 | mRNA | 13175346 | 13179297 | 13175346 | ID=MS.gene35823.t1;Parent=MS.gene35823 |
| chr2.1 | exon | 13179188 | 13179297 | 13179188 | ID=MS.gene35823.t1.exon1;Parent=MS.gene35823.t1 |
| chr2.1 | CDS | 13179188 | 13179297 | 13179188 | ID=cds.MS.gene35823.t1;Parent=MS.gene35823.t1 |
| chr2.1 | exon | 13177931 | 13178027 | 13177931 | ID=MS.gene35823.t1.exon2;Parent=MS.gene35823.t1 |
| chr2.1 | CDS | 13177931 | 13178027 | 13177931 | ID=cds.MS.gene35823.t1;Parent=MS.gene35823.t1 |
| chr2.1 | exon | 13177787 | 13177848 | 13177787 | ID=MS.gene35823.t1.exon3;Parent=MS.gene35823.t1 |
| chr2.1 | CDS | 13177787 | 13177848 | 13177787 | ID=cds.MS.gene35823.t1;Parent=MS.gene35823.t1 |
| chr2.1 | exon | 13177490 | 13177701 | 13177490 | ID=MS.gene35823.t1.exon4;Parent=MS.gene35823.t1 |
| chr2.1 | CDS | 13177490 | 13177701 | 13177490 | ID=cds.MS.gene35823.t1;Parent=MS.gene35823.t1 |
| chr2.1 | exon | 13177136 | 13177199 | 13177136 | ID=MS.gene35823.t1.exon5;Parent=MS.gene35823.t1 |
| chr2.1 | CDS | 13177136 | 13177199 | 13177136 | ID=cds.MS.gene35823.t1;Parent=MS.gene35823.t1 |
| chr2.1 | exon | 13176859 | 13176931 | 13176859 | ID=MS.gene35823.t1.exon6;Parent=MS.gene35823.t1 |
| chr2.1 | CDS | 13176859 | 13176931 | 13176859 | ID=cds.MS.gene35823.t1;Parent=MS.gene35823.t1 |
| chr2.1 | exon | 13176634 | 13176754 | 13176634 | ID=MS.gene35823.t1.exon7;Parent=MS.gene35823.t1 |
| chr2.1 | CDS | 13176634 | 13176754 | 13176634 | ID=cds.MS.gene35823.t1;Parent=MS.gene35823.t1 |
| chr2.1 | exon | 13176338 | 13176425 | 13176338 | ID=MS.gene35823.t1.exon8;Parent=MS.gene35823.t1 |
| chr2.1 | CDS | 13176338 | 13176425 | 13176338 | ID=cds.MS.gene35823.t1;Parent=MS.gene35823.t1 |
| chr2.1 | exon | 13176108 | 13176233 | 13176108 | ID=MS.gene35823.t1.exon9;Parent=MS.gene35823.t1 |
| chr2.1 | CDS | 13176108 | 13176233 | 13176108 | ID=cds.MS.gene35823.t1;Parent=MS.gene35823.t1 |
| chr2.1 | exon | 13175922 | 13176028 | 13175922 | ID=MS.gene35823.t1.exon10;Parent=MS.gene35823.t1 |
| chr2.1 | CDS | 13175922 | 13176028 | 13175922 | ID=cds.MS.gene35823.t1;Parent=MS.gene35823.t1 |
| chr2.1 | exon | 13175346 | 13175494 | 13175346 | ID=MS.gene35823.t1.exon11;Parent=MS.gene35823.t1 |
| chr2.1 | CDS | 13175346 | 13175494 | 13175346 | ID=cds.MS.gene35823.t1;Parent=MS.gene35823.t1 |
| Gene Sequence |
| Protein sequence |
