Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35824.t1 | XP_003596979.1 | 99.1 | 333 | 3 | 0 | 1 | 333 | 70 | 402 | 1.20E-174 | 622.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35824.t1 | A8MRC7 | 75.7 | 338 | 77 | 2 | 1 | 333 | 70 | 407 | 5.3e-152 | 538.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35824.t1 | G7ITY6 | 99.1 | 333 | 3 | 0 | 1 | 333 | 70 | 402 | 8.3e-175 | 622.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene35824 | 0.800009 | 1.76E-48 | -1.69E-46 |
| MS.gene049159 | MS.gene35824 | 0.845439 | 4.06E-59 | -1.69E-46 |
| MS.gene049378 | MS.gene35824 | 0.84034 | 9.22E-58 | -1.69E-46 |
| MS.gene049404 | MS.gene35824 | 0.826006 | 3.44E-54 | -1.69E-46 |
| MS.gene049435 | MS.gene35824 | 0.859839 | 3.13E-63 | -1.69E-46 |
| MS.gene049647 | MS.gene35824 | 0.824204 | 9.16E-54 | -1.69E-46 |
| MS.gene049669 | MS.gene35824 | 0.825069 | 5.73E-54 | -1.69E-46 |
| MS.gene049958 | MS.gene35824 | 0.805837 | 1.10E-49 | -1.69E-46 |
| MS.gene050156 | MS.gene35824 | 0.805156 | 1.53E-49 | -1.69E-46 |
| MS.gene050226 | MS.gene35824 | 0.834106 | 3.63E-56 | -1.69E-46 |
| MS.gene050227 | MS.gene35824 | 0.820751 | 5.81E-53 | -1.69E-46 |
| MS.gene050228 | MS.gene35824 | 0.823734 | 1.18E-53 | -1.69E-46 |
| MS.gene050442 | MS.gene35824 | 0.870405 | 1.50E-66 | -1.69E-46 |
| MS.gene050605 | MS.gene35824 | 0.820195 | 7.80E-53 | -1.69E-46 |
| MS.gene050623 | MS.gene35824 | -0.805498 | 1.30E-49 | -1.69E-46 |
| MS.gene050629 | MS.gene35824 | -0.803847 | 2.87E-49 | -1.69E-46 |
| MS.gene050680 | MS.gene35824 | 0.839611 | 1.43E-57 | -1.69E-46 |
| MS.gene050750 | MS.gene35824 | 0.824736 | 6.87E-54 | -1.69E-46 |
| MS.gene050759 | MS.gene35824 | 0.81681 | 4.56E-52 | -1.69E-46 |
| MS.gene050762 | MS.gene35824 | 0.834294 | 3.26E-56 | -1.69E-46 |
| MS.gene050763 | MS.gene35824 | 0.834609 | 2.71E-56 | -1.69E-46 |
| MS.gene050787 | MS.gene35824 | 0.802093 | 6.61E-49 | -1.69E-46 |
| MS.gene050807 | MS.gene35824 | 0.814295 | 1.66E-51 | -1.69E-46 |
| MS.gene050826 | MS.gene35824 | 0.83884 | 2.26E-57 | -1.69E-46 |
| MS.gene050844 | MS.gene35824 | 0.821293 | 4.36E-53 | -1.69E-46 |
| MS.gene050953 | MS.gene35824 | 0.827978 | 1.16E-54 | -1.69E-46 |
| MS.gene050962 | MS.gene35824 | 0.806087 | 9.75E-50 | -1.69E-46 |
| MS.gene051066 | MS.gene35824 | 0.812001 | 5.28E-51 | -1.69E-46 |
| MS.gene051147 | MS.gene35824 | 0.852188 | 5.44E-61 | -1.69E-46 |
| MS.gene051198 | MS.gene35824 | 0.85132 | 9.58E-61 | -1.69E-46 |
| MS.gene051210 | MS.gene35824 | 0.845489 | 3.93E-59 | -1.69E-46 |
| MS.gene051247 | MS.gene35824 | 0.812053 | 5.14E-51 | -1.69E-46 |
| MS.gene051265 | MS.gene35824 | 0.807526 | 4.84E-50 | -1.69E-46 |
| MS.gene051368 | MS.gene35824 | 0.828378 | 9.29E-55 | -1.69E-46 |
| MS.gene051490 | MS.gene35824 | 0.815713 | 8.03E-52 | -1.69E-46 |
| MS.gene051800 | MS.gene35824 | 0.845995 | 2.87E-59 | -1.69E-46 |
| MS.gene051935 | MS.gene35824 | 0.814506 | 1.49E-51 | -1.69E-46 |
| MS.gene052042 | MS.gene35824 | 0.817543 | 3.12E-52 | -1.69E-46 |
| MS.gene052056 | MS.gene35824 | -0.826839 | 2.18E-54 | -1.69E-46 |
| MS.gene052333 | MS.gene35824 | 0.851532 | 8.35E-61 | -1.69E-46 |
| MS.gene052389 | MS.gene35824 | 0.811516 | 6.73E-51 | -1.69E-46 |
| MS.gene052426 | MS.gene35824 | 0.831326 | 1.78E-55 | -1.69E-46 |
| MS.gene052586 | MS.gene35824 | 0.827155 | 1.83E-54 | -1.69E-46 |
| MS.gene052665 | MS.gene35824 | 0.817991 | 2.47E-52 | -1.69E-46 |
| MS.gene052674 | MS.gene35824 | 0.833797 | 4.34E-56 | -1.69E-46 |
| MS.gene052675 | MS.gene35824 | 0.833789 | 4.36E-56 | -1.69E-46 |
| MS.gene052677 | MS.gene35824 | 0.846497 | 2.09E-59 | -1.69E-46 |
| MS.gene052863 | MS.gene35824 | 0.814418 | 1.56E-51 | -1.69E-46 |
| MS.gene05288 | MS.gene35824 | 0.820183 | 7.85E-53 | -1.69E-46 |
| MS.gene052896 | MS.gene35824 | 0.812811 | 3.51E-51 | -1.69E-46 |
| MS.gene05289 | MS.gene35824 | 0.800337 | 1.51E-48 | -1.69E-46 |
| MS.gene053008 | MS.gene35824 | 0.816546 | 5.23E-52 | -1.69E-46 |
| MS.gene053147 | MS.gene35824 | 0.824761 | 6.77E-54 | -1.69E-46 |
| MS.gene053166 | MS.gene35824 | 0.848065 | 7.77E-60 | -1.69E-46 |
| MS.gene053184 | MS.gene35824 | 0.80413 | 2.50E-49 | -1.69E-46 |
| MS.gene053201 | MS.gene35824 | 0.809533 | 1.81E-50 | -1.69E-46 |
| MS.gene053221 | MS.gene35824 | 0.809183 | 2.15E-50 | -1.69E-46 |
| MS.gene053494 | MS.gene35824 | 0.801526 | 8.64E-49 | -1.69E-46 |
| MS.gene053584 | MS.gene35824 | 0.809623 | 1.73E-50 | -1.69E-46 |
| MS.gene053621 | MS.gene35824 | 0.804983 | 1.66E-49 | -1.69E-46 |
| MS.gene053641 | MS.gene35824 | 0.802154 | 6.42E-49 | -1.69E-46 |
| MS.gene05414 | MS.gene35824 | 0.814526 | 1.47E-51 | -1.69E-46 |
| MS.gene05415 | MS.gene35824 | 0.829157 | 6.02E-55 | -1.69E-46 |
| MS.gene054236 | MS.gene35824 | 0.85031 | 1.84E-60 | -1.69E-46 |
| MS.gene054291 | MS.gene35824 | -0.833187 | 6.16E-56 | -1.69E-46 |
| MS.gene054379 | MS.gene35824 | 0.845862 | 3.12E-59 | -1.69E-46 |
| MS.gene054405 | MS.gene35824 | 0.820242 | 7.61E-53 | -1.69E-46 |
| MS.gene054467 | MS.gene35824 | 0.864457 | 1.20E-64 | -1.69E-46 |
| MS.gene054468 | MS.gene35824 | 0.871702 | 5.59E-67 | -1.69E-46 |
| MS.gene054472 | MS.gene35824 | 0.83225 | 1.05E-55 | -1.69E-46 |
| MS.gene054479 | MS.gene35824 | 0.832787 | 7.75E-56 | -1.69E-46 |
| MS.gene054559 | MS.gene35824 | 0.825557 | 4.39E-54 | -1.69E-46 |
| MS.gene054581 | MS.gene35824 | 0.810876 | 9.27E-51 | -1.69E-46 |
| MS.gene05468 | MS.gene35824 | 0.822718 | 2.04E-53 | -1.69E-46 |
| MS.gene054775 | MS.gene35824 | 0.825463 | 4.62E-54 | -1.69E-46 |
| MS.gene054826 | MS.gene35824 | 0.812296 | 4.55E-51 | -1.69E-46 |
| MS.gene054875 | MS.gene35824 | 0.803717 | 3.05E-49 | -1.69E-46 |
| MS.gene054930 | MS.gene35824 | 0.824763 | 6.77E-54 | -1.69E-46 |
| MS.gene05510 | MS.gene35824 | 0.833319 | 5.71E-56 | -1.69E-46 |
| MS.gene055227 | MS.gene35824 | 0.830633 | 2.63E-55 | -1.69E-46 |
| MS.gene055228 | MS.gene35824 | 0.80953 | 1.81E-50 | -1.69E-46 |
| MS.gene055230 | MS.gene35824 | 0.803794 | 2.94E-49 | -1.69E-46 |
| MS.gene055356 | MS.gene35824 | 0.871322 | 7.47E-67 | -1.69E-46 |
| MS.gene055357 | MS.gene35824 | 0.828771 | 7.47E-55 | -1.69E-46 |
| MS.gene055358 | MS.gene35824 | 0.847924 | 8.50E-60 | -1.69E-46 |
| MS.gene055367 | MS.gene35824 | 0.804531 | 2.07E-49 | -1.69E-46 |
| MS.gene055608 | MS.gene35824 | 0.802879 | 4.55E-49 | -1.69E-46 |
| MS.gene055623 | MS.gene35824 | 0.812541 | 4.03E-51 | -1.69E-46 |
| MS.gene055701 | MS.gene35824 | 0.877101 | 8.23E-69 | -1.69E-46 |
| MS.gene055818 | MS.gene35824 | 0.831874 | 1.30E-55 | -1.69E-46 |
| MS.gene055926 | MS.gene35824 | 0.874803 | 5.08E-68 | -1.69E-46 |
| MS.gene05595 | MS.gene35824 | 0.805726 | 1.16E-49 | -1.69E-46 |
| MS.gene05604 | MS.gene35824 | 0.849169 | 3.84E-60 | -1.69E-46 |
| MS.gene056162 | MS.gene35824 | 0.806027 | 1.00E-49 | -1.69E-46 |
| MS.gene056173 | MS.gene35824 | 0.843661 | 1.22E-58 | -1.69E-46 |
| MS.gene056174 | MS.gene35824 | 0.827937 | 1.19E-54 | -1.69E-46 |
| MS.gene056480 | MS.gene35824 | 0.826507 | 2.61E-54 | -1.69E-46 |
| MS.gene056506 | MS.gene35824 | 0.828033 | 1.13E-54 | -1.69E-46 |
| MS.gene056873 | MS.gene35824 | 0.834281 | 3.28E-56 | -1.69E-46 |
| MS.gene057012 | MS.gene35824 | 0.81972 | 1.00E-52 | -1.69E-46 |
| MS.gene057026 | MS.gene35824 | 0.818671 | 1.74E-52 | -1.69E-46 |
| MS.gene057156 | MS.gene35824 | -0.833145 | 6.31E-56 | -1.69E-46 |
| MS.gene057194 | MS.gene35824 | 0.831343 | 1.76E-55 | -1.69E-46 |
| MS.gene057200 | MS.gene35824 | 0.807014 | 6.22E-50 | -1.69E-46 |
| MS.gene057394 | MS.gene35824 | 0.803661 | 3.13E-49 | -1.69E-46 |
| MS.gene057444 | MS.gene35824 | 0.806377 | 8.47E-50 | -1.69E-46 |
| MS.gene05761 | MS.gene35824 | 0.830137 | 3.48E-55 | -1.69E-46 |
| MS.gene057693 | MS.gene35824 | 0.815348 | 9.68E-52 | -1.69E-46 |
| MS.gene057750 | MS.gene35824 | 0.802793 | 4.74E-49 | -1.69E-46 |
| MS.gene057869 | MS.gene35824 | 0.83489 | 2.31E-56 | -1.69E-46 |
| MS.gene057915 | MS.gene35824 | 0.821296 | 4.35E-53 | -1.69E-46 |
| MS.gene058010 | MS.gene35824 | 0.809816 | 1.57E-50 | -1.69E-46 |
| MS.gene058081 | MS.gene35824 | 0.808222 | 3.44E-50 | -1.69E-46 |
| MS.gene058146 | MS.gene35824 | 0.843757 | 1.15E-58 | -1.69E-46 |
| MS.gene058223 | MS.gene35824 | -0.803474 | 3.43E-49 | -1.69E-46 |
| MS.gene058548 | MS.gene35824 | 0.80178 | 7.66E-49 | -1.69E-46 |
| MS.gene058595 | MS.gene35824 | 0.824727 | 6.90E-54 | -1.69E-46 |
| MS.gene058636 | MS.gene35824 | 0.815593 | 8.54E-52 | -1.69E-46 |
| MS.gene05872 | MS.gene35824 | 0.814958 | 1.18E-51 | -1.69E-46 |
| MS.gene058979 | MS.gene35824 | 0.819186 | 1.33E-52 | -1.69E-46 |
| MS.gene05897 | MS.gene35824 | 0.820974 | 5.16E-53 | -1.69E-46 |
| MS.gene059128 | MS.gene35824 | 0.850642 | 1.49E-60 | -1.69E-46 |
| MS.gene059161 | MS.gene35824 | 0.849073 | 4.09E-60 | -1.69E-46 |
| MS.gene059272 | MS.gene35824 | 0.813041 | 3.13E-51 | -1.69E-46 |
| MS.gene059283 | MS.gene35824 | 0.811519 | 6.72E-51 | -1.69E-46 |
| MS.gene059438 | MS.gene35824 | 0.820835 | 5.56E-53 | -1.69E-46 |
| MS.gene059439 | MS.gene35824 | 0.843091 | 1.73E-58 | -1.69E-46 |
| MS.gene059440 | MS.gene35824 | 0.837092 | 6.37E-57 | -1.69E-46 |
| MS.gene059584 | MS.gene35824 | 0.800713 | 1.27E-48 | -1.69E-46 |
| MS.gene059607 | MS.gene35824 | 0.815472 | 9.08E-52 | -1.69E-46 |
| MS.gene059609 | MS.gene35824 | 0.834874 | 2.33E-56 | -1.69E-46 |
| MS.gene059725 | MS.gene35824 | 0.845063 | 5.13E-59 | -1.69E-46 |
| MS.gene059842 | MS.gene35824 | 0.832675 | 8.26E-56 | -1.69E-46 |
| MS.gene059952 | MS.gene35824 | 0.822323 | 2.52E-53 | -1.69E-46 |
| MS.gene060011 | MS.gene35824 | 0.853177 | 2.84E-61 | -1.69E-46 |
| MS.gene060137 | MS.gene35824 | -0.82926 | 5.69E-55 | -1.69E-46 |
| MS.gene060167 | MS.gene35824 | 0.827453 | 1.55E-54 | -1.69E-46 |
| MS.gene060310 | MS.gene35824 | 0.808373 | 3.20E-50 | -1.69E-46 |
| MS.gene060322 | MS.gene35824 | 0.879181 | 1.54E-69 | -1.69E-46 |
| MS.gene06052 | MS.gene35824 | 0.864117 | 1.53E-64 | -1.69E-46 |
| MS.gene060637 | MS.gene35824 | 0.802554 | 5.31E-49 | -1.69E-46 |
| MS.gene060683 | MS.gene35824 | 0.862476 | 4.93E-64 | -1.69E-46 |
| MS.gene060685 | MS.gene35824 | 0.862241 | 5.82E-64 | -1.69E-46 |
| MS.gene060802 | MS.gene35824 | 0.87358 | 1.32E-67 | -1.69E-46 |
| MS.gene060803 | MS.gene35824 | 0.860716 | 1.70E-63 | -1.69E-46 |
| MS.gene060918 | MS.gene35824 | 0.807098 | 5.97E-50 | -1.69E-46 |
| MS.gene060998 | MS.gene35824 | 0.872532 | 2.96E-67 | -1.69E-46 |
| MS.gene061114 | MS.gene35824 | -0.811908 | 5.53E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35824.t1 | MTR_2g088270 | 98.799 | 333 | 4 | 0 | 1 | 333 | 70 | 402 | 0.0 | 684 |
| MS.gene35824.t1 | MTR_4g048320 | 81.361 | 338 | 58 | 2 | 1 | 333 | 12 | 349 | 0.0 | 593 |
| MS.gene35824.t1 | MTR_4g048320 | 81.361 | 338 | 58 | 2 | 1 | 333 | 70 | 407 | 0.0 | 592 |
| MS.gene35824.t1 | MTR_3g073370 | 67.267 | 333 | 104 | 3 | 2 | 333 | 68 | 396 | 6.73e-173 | 486 |
| MS.gene35824.t1 | MTR_3g073370 | 67.267 | 333 | 104 | 3 | 2 | 333 | 67 | 395 | 8.09e-173 | 485 |
| MS.gene35824.t1 | MTR_4g013305 | 65.861 | 331 | 108 | 3 | 8 | 333 | 48 | 378 | 9.62e-164 | 462 |
| MS.gene35824.t1 | MTR_4g035490 | 59.248 | 319 | 125 | 2 | 13 | 330 | 66 | 380 | 1.42e-151 | 431 |
| MS.gene35824.t1 | MTR_5g009700 | 47.368 | 266 | 132 | 3 | 19 | 283 | 74 | 332 | 1.36e-83 | 256 |
| MS.gene35824.t1 | MTR_5g009700 | 47.826 | 253 | 124 | 3 | 32 | 283 | 1 | 246 | 1.21e-81 | 248 |
| MS.gene35824.t1 | MTR_3g090600 | 48.846 | 260 | 125 | 4 | 25 | 283 | 80 | 332 | 2.07e-81 | 251 |
| MS.gene35824.t1 | MTR_3g090600 | 48.846 | 260 | 123 | 5 | 25 | 283 | 80 | 330 | 8.80e-80 | 246 |
| MS.gene35824.t1 | MTR_1g012800 | 44.318 | 264 | 136 | 5 | 21 | 283 | 83 | 336 | 1.99e-70 | 223 |
| MS.gene35824.t1 | MTR_3g090600 | 48.085 | 235 | 111 | 5 | 25 | 255 | 80 | 307 | 3.40e-65 | 208 |
| MS.gene35824.t1 | MTR_3g090600 | 48.085 | 235 | 109 | 6 | 25 | 255 | 80 | 305 | 1.01e-63 | 204 |
| MS.gene35824.t1 | MTR_8g463930 | 34.340 | 265 | 158 | 7 | 59 | 320 | 77 | 328 | 4.34e-49 | 167 |
| MS.gene35824.t1 | MTR_2g078030 | 33.716 | 261 | 157 | 6 | 62 | 319 | 74 | 321 | 6.68e-48 | 164 |
| MS.gene35824.t1 | MTR_2g078030 | 35.043 | 234 | 142 | 5 | 56 | 284 | 68 | 296 | 1.03e-43 | 153 |
| MS.gene35824.t1 | MTR_5g041210 | 25.769 | 260 | 169 | 6 | 31 | 277 | 343 | 591 | 1.50e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35824.t1 | AT1G05170 | 80.178 | 338 | 62 | 2 | 1 | 333 | 70 | 407 | 0.0 | 585 |
| MS.gene35824.t1 | AT2G32430 | 79.290 | 338 | 65 | 2 | 1 | 333 | 72 | 409 | 0.0 | 548 |
| MS.gene35824.t1 | AT4G26940 | 77.083 | 336 | 73 | 1 | 2 | 333 | 72 | 407 | 0.0 | 546 |
| MS.gene35824.t1 | AT1G05170 | 79.443 | 287 | 55 | 1 | 1 | 283 | 70 | 356 | 1.03e-176 | 494 |
| MS.gene35824.t1 | AT1G32930 | 68.012 | 322 | 102 | 1 | 13 | 333 | 78 | 399 | 5.37e-174 | 488 |
| MS.gene35824.t1 | AT1G11730 | 69.716 | 317 | 89 | 2 | 17 | 332 | 73 | 383 | 2.38e-170 | 479 |
| MS.gene35824.t1 | AT1G77810 | 66.061 | 330 | 94 | 4 | 2 | 330 | 69 | 381 | 2.53e-165 | 466 |
| MS.gene35824.t1 | AT1G77810 | 65.465 | 333 | 94 | 5 | 2 | 330 | 69 | 384 | 3.46e-163 | 461 |
| MS.gene35824.t1 | AT1G33430 | 62.805 | 328 | 116 | 4 | 8 | 333 | 70 | 393 | 2.56e-152 | 433 |
| MS.gene35824.t1 | AT1G22015 | 61.180 | 322 | 120 | 2 | 13 | 333 | 78 | 395 | 4.77e-150 | 427 |
| MS.gene35824.t1 | AT1G33430 | 61.310 | 336 | 116 | 5 | 8 | 333 | 70 | 401 | 4.22e-149 | 426 |
| MS.gene35824.t1 | AT1G33430 | 62.963 | 243 | 85 | 3 | 8 | 249 | 70 | 308 | 2.05e-104 | 308 |
| MS.gene35824.t1 | AT4G26940 | 74.163 | 209 | 50 | 1 | 3 | 207 | 73 | 281 | 1.59e-103 | 306 |
| MS.gene35824.t1 | AT5G53340 | 47.170 | 265 | 130 | 5 | 25 | 287 | 76 | 332 | 1.01e-82 | 254 |
| MS.gene35824.t1 | AT5G53340 | 47.876 | 259 | 125 | 5 | 25 | 281 | 76 | 326 | 1.76e-82 | 253 |
| MS.gene35824.t1 | AT4G32120 | 44.030 | 268 | 138 | 5 | 21 | 287 | 83 | 339 | 6.40e-71 | 224 |
| MS.gene35824.t1 | AT2G25300 | 43.985 | 266 | 133 | 5 | 21 | 283 | 6 | 258 | 7.53e-71 | 221 |
| MS.gene35824.t1 | AT2G25300 | 43.985 | 266 | 133 | 5 | 21 | 283 | 84 | 336 | 9.24e-70 | 221 |
| MS.gene35824.t1 | AT2G26100 | 37.023 | 262 | 147 | 8 | 62 | 319 | 107 | 354 | 6.20e-51 | 173 |
| MS.gene35824.t1 | AT1G53290 | 34.351 | 262 | 156 | 6 | 62 | 320 | 83 | 331 | 2.28e-48 | 166 |
| MS.gene35824.t1 | AT3G14960 | 33.846 | 260 | 156 | 6 | 62 | 318 | 81 | 327 | 3.72e-48 | 165 |
| MS.gene35824.t1 | AT2G26100 | 37.104 | 221 | 132 | 4 | 62 | 280 | 107 | 322 | 1.34e-45 | 159 |
Find 62 sgRNAs with CRISPR-Local
Find 136 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATTAGGAGCTTGGTTTAT+TGG | 0.181423 | 2.1:+13132033 | MS.gene35824:CDS |
| AGACAAGACTATTTCAAATT+TGG | 0.187361 | 2.1:+13130332 | MS.gene35824:CDS |
| ATTATCATCCGCTTTGTAAT+TGG | 0.210456 | 2.1:+13130863 | MS.gene35824:CDS |
| GAACCAGAATACTGGAAATT+TGG | 0.236437 | 2.1:+13131810 | MS.gene35824:CDS |
| TCACCAAATTTCCAGTATTC+TGG | 0.244223 | 2.1:-13131813 | None:intergenic |
| CATGTGTTGCTTCATTTGAT+TGG | 0.320410 | 2.1:+13132563 | MS.gene35824:CDS |
| TTTGTGGAGTGCTTCTTTCT+AGG | 0.339012 | 2.1:+13132660 | MS.gene35824:CDS |
| ATTTCCAGTATTCTGGTTCA+TGG | 0.346108 | 2.1:-13131806 | None:intergenic |
| TGCTACTGCTGTTAACTTGT+GGG | 0.357057 | 2.1:+13131323 | MS.gene35824:CDS |
| GACTATTTCAAATTTGGAAA+TGG | 0.359715 | 2.1:+13130338 | MS.gene35824:CDS |
| GCAAATGAGGATGTTTCATT+AGG | 0.363722 | 2.1:+13132018 | MS.gene35824:CDS |
| AGAAGGTACCTAATGGTTAT+AGG | 0.369031 | 2.1:+13130450 | MS.gene35824:CDS |
| TTGTCTTTGCTGATAATTCA+AGG | 0.373953 | 2.1:-13131290 | None:intergenic |
| ATCTTCATATCTTCTGATAC+AGG | 0.403107 | 2.1:-13130408 | None:intergenic |
| ACATGGAGATTTCCTGAGAT+TGG | 0.407780 | 2.1:+13131147 | MS.gene35824:CDS |
| GAGATTCCGTTCGCGCCACT+TGG | 0.410674 | 2.1:+13130505 | MS.gene35824:CDS |
| TGAGAAAAGAAAGAAGTTAG+AGG | 0.413201 | 2.1:+13130829 | MS.gene35824:CDS |
| TGTTAATTCCTATAACCATT+AGG | 0.414080 | 2.1:-13130458 | None:intergenic |
| TACTGGAAATTTGGTGAGAC+AGG | 0.417346 | 2.1:+13131819 | MS.gene35824:CDS |
| TACATCGGATGCATGAAATC+TGG | 0.429775 | 2.1:+13131649 | MS.gene35824:CDS |
| GGACATGCAGTGGAATTTGT+AGG | 0.432142 | 2.1:+13132584 | MS.gene35824:CDS |
| GTTAACAGCAGTAGCAAAGT+AGG | 0.436177 | 2.1:-13131316 | None:intergenic |
| CTGCCTCAATAGCTCGATCT+AGG | 0.448168 | 2.1:-13131114 | None:intergenic |
| AAAGAAGTTAGAGGAAGAGA+AGG | 0.449533 | 2.1:+13130838 | MS.gene35824:CDS |
| GATGATGTTCATGTAAATAT+AGG | 0.452270 | 2.1:+13131372 | MS.gene35824:CDS |
| GGTACCATGAACCAGAATAC+TGG | 0.454852 | 2.1:+13131802 | MS.gene35824:CDS |
| AGGATGTTTCATTAGGAGCT+TGG | 0.461834 | 2.1:+13132025 | MS.gene35824:CDS |
| ATCCGCTTTGTAATTGGTCA+TGG | 0.467305 | 2.1:+13130869 | MS.gene35824:CDS |
| AGATAAGTGAATCAACTGTT+AGG | 0.471693 | 2.1:+13130427 | MS.gene35824:CDS |
| AGACTATGCTGTGGTACAAC+AGG | 0.477338 | 2.1:+13132084 | MS.gene35824:CDS |
| AAGTGATCATTACCAATCTC+AGG | 0.483099 | 2.1:-13131159 | None:intergenic |
| TTGCTACTGCTGTTAACTTG+TGG | 0.487451 | 2.1:+13131322 | MS.gene35824:CDS |
| AAAATTCTTGCAGAGGAGTA+AGG | 0.491081 | 2.1:+13131781 | MS.gene35824:intron |
| TGGCATCCAAGTGGCGCGAA+CGG | 0.528936 | 2.1:-13130511 | None:intergenic |
| TGTTAGGAGAAGGTACCTAA+TGG | 0.531626 | 2.1:+13130443 | MS.gene35824:CDS |
| GAGAAGGTGAGAAAGCTTTG+TGG | 0.536239 | 2.1:+13132644 | MS.gene35824:CDS |
| CGCGCCACTTGGATGCCACA+AGG | 0.537211 | 2.1:+13130516 | MS.gene35824:CDS |
| AAGTACTTTCGTCATGCGAC+AGG | 0.539105 | 2.1:+13131846 | MS.gene35824:CDS |
| TTCTCTAGTGCCACGACAGG+TGG | 0.546041 | 2.1:+13131088 | MS.gene35824:intron |
| TCCATCATGCAGATTGTGAA+TGG | 0.546325 | 2.1:+13132521 | MS.gene35824:intron |
| TCCGCTTTGTAATTGGTCAT+GGG | 0.549475 | 2.1:+13130870 | MS.gene35824:CDS |
| AAGAAGTTAGAGGAAGAGAA+GGG | 0.551717 | 2.1:+13130839 | MS.gene35824:CDS |
| ATTGTGCAGGATCATGTTGA+AGG | 0.557008 | 2.1:+13131264 | MS.gene35824:intron |
| TTGGTTTATTGGTCTTGATG+TGG | 0.560157 | 2.1:+13132044 | MS.gene35824:CDS |
| CCTTTCTCTAGTGCCACGAC+AGG | 0.562439 | 2.1:+13131085 | MS.gene35824:intron |
| TCTTCACAAGTATGCAAATG+AGG | 0.564981 | 2.1:+13132005 | MS.gene35824:CDS |
| TATCCTAGATCGAGCTATTG+AGG | 0.566969 | 2.1:+13131111 | MS.gene35824:CDS |
| CGGATGCATGAAATCTGGAC+CGG | 0.576274 | 2.1:+13131654 | MS.gene35824:CDS |
| TCATGCAGATTGTGAATGGA+AGG | 0.579298 | 2.1:+13132525 | MS.gene35824:intron |
| TCATTTGATTGGACATGCAG+TGG | 0.579796 | 2.1:+13132574 | MS.gene35824:CDS |
| TGTGAATGGAAGGCTCAAGC+GGG | 0.589727 | 2.1:+13132535 | MS.gene35824:CDS |
| TCTTCTTTAGTTGCAAGAGA+AGG | 0.590624 | 2.1:+13130169 | None:intergenic |
| GTGAATCAACTGTTAGGAGA+AGG | 0.596720 | 2.1:+13130433 | MS.gene35824:CDS |
| TTGTGAATGGAAGGCTCAAG+CGG | 0.615812 | 2.1:+13132534 | MS.gene35824:CDS |
| ATGCATCCGATGTATACTCG+TGG | 0.617141 | 2.1:-13131640 | None:intergenic |
| ATCTAGGATACCACCTGTCG+TGG | 0.640845 | 2.1:-13131098 | None:intergenic |
| GAGGCAGAAGATAGTAAACA+TGG | 0.646324 | 2.1:+13131130 | MS.gene35824:CDS |
| GAAGTGAAGCGCGATACGAA+AGG | 0.667111 | 2.1:+13130191 | MS.gene35824:CDS |
| ACCCATGACCAATTACAAAG+CGG | 0.684488 | 2.1:-13130871 | None:intergenic |
| GATGATCGTAGACTATGCTG+TGG | 0.703632 | 2.1:+13132075 | MS.gene35824:CDS |
| TGAACCTTGTGGCATCCAAG+TGG | 0.703947 | 2.1:-13130520 | None:intergenic |
| GCAAAACCACGAGTATACAT+CGG | 0.705929 | 2.1:+13131634 | MS.gene35824:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATACAAATAAAAATTATATC+TGG | + | chr2.1:13132147-13132166 | MS.gene35824:intron | 10.0% |
| !! | TAAAACAAATAAAGATTTAT+AGG | - | chr2.1:13132466-13132485 | None:intergenic | 10.0% |
| !! | TTATTAAACTCAAAAATATA+AGG | - | chr2.1:13130563-13130582 | None:intergenic | 10.0% |
| !!! | ATAATTTTAAATTCTTGAAT+TGG | + | chr2.1:13132498-13132517 | MS.gene35824:intron | 10.0% |
| !!! | ATTTTTTATATAAGCTATAT+AGG | + | chr2.1:13131422-13131441 | MS.gene35824:intron | 10.0% |
| !! | AATCAATCATCTATTAATAT+AGG | - | chr2.1:13132122-13132141 | None:intergenic | 15.0% |
| !! | TATAATTGAAGTGAAATTAA+TGG | + | chr2.1:13131956-13131975 | MS.gene35824:intron | 15.0% |
| !! | TTAAATAAAAAGATGGATAA+AGG | - | chr2.1:13131707-13131726 | None:intergenic | 15.0% |
| !!! | TCTTTTGTTAAATAAAAAGA+TGG | - | chr2.1:13131714-13131733 | None:intergenic | 15.0% |
| !! | AATAGTATGATATGATAAGA+TGG | - | chr2.1:13130630-13130649 | None:intergenic | 20.0% |
| !! | ATAAGATGGTAATATATGAA+TGG | - | chr2.1:13130616-13130635 | None:intergenic | 20.0% |
| !! | GAGTACAATAATAGAATTTA+GGG | - | chr2.1:13132427-13132446 | None:intergenic | 20.0% |
| !! | TGAGTACAATAATAGAATTT+AGG | - | chr2.1:13132428-13132447 | None:intergenic | 20.0% |
| !!! | TTTATAAACTATTGATTCTC+TGG | + | chr2.1:13130787-13130806 | MS.gene35824:intron | 20.0% |
| !!! | TTTTTTACTTCATAAGTAAG+AGG | - | chr2.1:13131936-13131955 | None:intergenic | 20.0% |
| ! | ACGTATGTGTAAAATGTTAT+CGG | - | chr2.1:13130593-13130612 | None:intergenic | 25.0% |
| ! | AGACAAGACTATTTCAAATT+TGG | + | chr2.1:13130332-13130351 | MS.gene35824:CDS | 25.0% |
| ! | GACTATTTCAAATTTGGAAA+TGG | + | chr2.1:13130338-13130357 | MS.gene35824:CDS | 25.0% |
| ! | GATGATGTTCATGTAAATAT+AGG | + | chr2.1:13131372-13131391 | MS.gene35824:CDS | 25.0% |
| ! | TGTTAATTCCTATAACCATT+AGG | - | chr2.1:13130461-13130480 | None:intergenic | 25.0% |
| ! | TTGCTGAAAATAGATTGAAT+TGG | - | chr2.1:13131585-13131604 | None:intergenic | 25.0% |
| ! | TTTCGAAGAGATTATAGAAA+CGG | - | chr2.1:13131507-13131526 | None:intergenic | 25.0% |
| AAAGAAGTCCACAAAAAATG+TGG | + | chr2.1:13132622-13132641 | MS.gene35824:CDS | 30.0% | |
| ACTAAACTCGAGATAGTTAT+AGG | - | chr2.1:13130934-13130953 | None:intergenic | 30.0% | |
| AGATAAGTGAATCAACTGTT+AGG | + | chr2.1:13130427-13130446 | MS.gene35824:CDS | 30.0% | |
| ATCTTCATATCTTCTGATAC+AGG | - | chr2.1:13130411-13130430 | None:intergenic | 30.0% | |
| ATTATCATCCGCTTTGTAAT+TGG | + | chr2.1:13130863-13130882 | MS.gene35824:CDS | 30.0% | |
| CATATTTCCATAAATTCTCG+TGG | - | chr2.1:13131455-13131474 | None:intergenic | 30.0% | |
| GTTATATGTAACTCACTGTA+TGG | - | chr2.1:13130237-13130256 | None:intergenic | 30.0% | |
| TCATAAGTAAGAGGAAAAAG+TGG | - | chr2.1:13131927-13131946 | None:intergenic | 30.0% | |
| TGAGAAAAGAAAGAAGTTAG+AGG | + | chr2.1:13130829-13130848 | MS.gene35824:CDS | 30.0% | |
| TTGAAACTATAGAGATGAGA+TGG | - | chr2.1:13130900-13130919 | None:intergenic | 30.0% | |
| TTGTCTTTGCTGATAATTCA+AGG | - | chr2.1:13131293-13131312 | None:intergenic | 30.0% | |
| TTTGTTTCCACGAGAATTTA+TGG | + | chr2.1:13131445-13131464 | MS.gene35824:intron | 30.0% | |
| ! | AATCTATTTTCAGCAACACT+CGG | + | chr2.1:13131589-13131608 | MS.gene35824:intron | 30.0% |
| !! | GTATGATCCTATTGATTTGA+AGG | + | chr2.1:13131202-13131221 | MS.gene35824:intron | 30.0% |
| !!! | AATTTGTGTTTTGATTGTGC+AGG | + | chr2.1:13131251-13131270 | MS.gene35824:intron | 30.0% |
| AAAATTCTTGCAGAGGAGTA+AGG | + | chr2.1:13131781-13131800 | MS.gene35824:intron | 35.0% | |
| AAAGAAGTTAGAGGAAGAGA+AGG | + | chr2.1:13130838-13130857 | MS.gene35824:CDS | 35.0% | |
| AAAGTGTGCACAAGAATAGA+AGG | - | chr2.1:13130770-13130789 | None:intergenic | 35.0% | |
| AAGAAGTTAGAGGAAGAGAA+GGG | + | chr2.1:13130839-13130858 | MS.gene35824:CDS | 35.0% | |
| AAGTGATCATTACCAATCTC+AGG | - | chr2.1:13131162-13131181 | None:intergenic | 35.0% | |
| ACATGTCAAAATTCTTGCAG+AGG | + | chr2.1:13131774-13131793 | MS.gene35824:intron | 35.0% | |
| CTTTCCTCCTTCAAATCAAT+AGG | - | chr2.1:13131212-13131231 | None:intergenic | 35.0% | |
| GAACCAGAATACTGGAAATT+TGG | + | chr2.1:13131810-13131829 | MS.gene35824:CDS | 35.0% | |
| GCAAATGAGGATGTTTCATT+AGG | + | chr2.1:13132018-13132037 | MS.gene35824:CDS | 35.0% | |
| TCACCAAATTTCCAGTATTC+TGG | - | chr2.1:13131816-13131835 | None:intergenic | 35.0% | |
| TCATTAGGAGCTTGGTTTAT+TGG | + | chr2.1:13132033-13132052 | MS.gene35824:CDS | 35.0% | |
| TCTTCACAAGTATGCAAATG+AGG | + | chr2.1:13132005-13132024 | MS.gene35824:CDS | 35.0% | |
| TGATCGAATTATGAACCTTG+TGG | - | chr2.1:13130534-13130553 | None:intergenic | 35.0% | |
| ! | ACTTAAAACCCAACTTGCTT+GGG | + | chr2.1:13132316-13132335 | MS.gene35824:intron | 35.0% |
| !! | AGAAGGTACCTAATGGTTAT+AGG | + | chr2.1:13130450-13130469 | MS.gene35824:CDS | 35.0% |
| !! | ATTTCCAGTATTCTGGTTCA+TGG | - | chr2.1:13131809-13131828 | None:intergenic | 35.0% |
| !! | CATGTGTTGCTTCATTTGAT+TGG | + | chr2.1:13132563-13132582 | MS.gene35824:CDS | 35.0% |
| !! | TGATCCTATTGATTTGAAGG+AGG | + | chr2.1:13131205-13131224 | MS.gene35824:intron | 35.0% |
| !! | TTGGTTTATTGGTCTTGATG+TGG | + | chr2.1:13132044-13132063 | MS.gene35824:CDS | 35.0% |
| ACATGGAGATTTCCTGAGAT+TGG | + | chr2.1:13131147-13131166 | MS.gene35824:CDS | 40.0% | |
| ACCCATGACCAATTACAAAG+CGG | - | chr2.1:13130874-13130893 | None:intergenic | 40.0% | |
| ACTTAAACCCCAAGCAAGTT+GGG | - | chr2.1:13132327-13132346 | None:intergenic | 40.0% | |
| AGCCCTTAGGAATGTATTGA+CGG | - | chr2.1:13132174-13132193 | None:intergenic | 40.0% | |
| AGGATGTTTCATTAGGAGCT+TGG | + | chr2.1:13132025-13132044 | MS.gene35824:CDS | 40.0% | |
| ATCCGCTTTGTAATTGGTCA+TGG | + | chr2.1:13130869-13130888 | MS.gene35824:CDS | 40.0% | |
| ATTGTGCAGGATCATGTTGA+AGG | + | chr2.1:13131264-13131283 | MS.gene35824:intron | 40.0% | |
| CCTTGAGAATGATCCAAAAG+GGG | - | chr2.1:13132384-13132403 | None:intergenic | 40.0% | |
| GACCGTCAATACATTCCTAA+GGG | + | chr2.1:13132169-13132188 | MS.gene35824:intron | 40.0% | |
| GAGGCAGAAGATAGTAAACA+TGG | + | chr2.1:13131130-13131149 | MS.gene35824:CDS | 40.0% | |
| GCAAAACCACGAGTATACAT+CGG | + | chr2.1:13131634-13131653 | MS.gene35824:CDS | 40.0% | |
| GCCTTGAGAATGATCCAAAA+GGG | - | chr2.1:13132385-13132404 | None:intergenic | 40.0% | |
| GGACTTTGTGTGTATGTGTT+AGG | + | chr2.1:13131977-13131996 | MS.gene35824:intron | 40.0% | |
| GGGTATTTATAGCGCTTTGT+GGG | - | chr2.1:13132364-13132383 | None:intergenic | 40.0% | |
| GTCCACAAAAAATGTGGAGA+AGG | + | chr2.1:13132628-13132647 | MS.gene35824:CDS | 40.0% | |
| GTGAATCAACTGTTAGGAGA+AGG | + | chr2.1:13130433-13130452 | MS.gene35824:CDS | 40.0% | |
| GTTAACAGCAGTAGCAAAGT+AGG | - | chr2.1:13131319-13131338 | None:intergenic | 40.0% | |
| TACATCGGATGCATGAAATC+TGG | + | chr2.1:13131649-13131668 | MS.gene35824:CDS | 40.0% | |
| TATCCTAGATCGAGCTATTG+AGG | + | chr2.1:13131111-13131130 | MS.gene35824:CDS | 40.0% | |
| TCATGCAGATTGTGAATGGA+AGG | + | chr2.1:13132525-13132544 | MS.gene35824:intron | 40.0% | |
| TCATTTGATTGGACATGCAG+TGG | + | chr2.1:13132574-13132593 | MS.gene35824:CDS | 40.0% | |
| TCCATCATGCAGATTGTGAA+TGG | + | chr2.1:13132521-13132540 | MS.gene35824:intron | 40.0% | |
| TCCATTCACAATCTGCATGA+TGG | - | chr2.1:13132525-13132544 | None:intergenic | 40.0% | |
| TCCGCTTTGTAATTGGTCAT+GGG | + | chr2.1:13130870-13130889 | MS.gene35824:CDS | 40.0% | |
| TCTAGATTGCTAGCTAGTTG+AGG | - | chr2.1:13132273-13132292 | None:intergenic | 40.0% | |
| TGCCTTGAGAATGATCCAAA+AGG | - | chr2.1:13132386-13132405 | None:intergenic | 40.0% | |
| TTGATTCTCTGGTGACATCT+TGG | + | chr2.1:13130798-13130817 | MS.gene35824:intron | 40.0% | |
| ! | AGCGCTATAAATACCCCTTT+TGG | + | chr2.1:13132368-13132387 | MS.gene35824:intron | 40.0% |
| ! | CTTAAAACCCAACTTGCTTG+GGG | + | chr2.1:13132317-13132336 | MS.gene35824:intron | 40.0% |
| ! | GACTTAAAACCCAACTTGCT+TGG | + | chr2.1:13132315-13132334 | MS.gene35824:intron | 40.0% |
| ! | GCTCAAGAGTCTCTAAAAAG+TGG | + | chr2.1:13130381-13130400 | MS.gene35824:CDS | 40.0% |
| ! | TACTGGAAATTTGGTGAGAC+AGG | + | chr2.1:13131819-13131838 | MS.gene35824:CDS | 40.0% |
| ! | TTGCTACTGCTGTTAACTTG+TGG | + | chr2.1:13131322-13131341 | MS.gene35824:CDS | 40.0% |
| !! | TCTCACTTTTGAGCAAGAAC+CGG | - | chr2.1:13131676-13131695 | None:intergenic | 40.0% |
| !! | TGCTACTGCTGTTAACTTGT+GGG | + | chr2.1:13131323-13131342 | MS.gene35824:CDS | 40.0% |
| !! | TGTTAGGAGAAGGTACCTAA+TGG | + | chr2.1:13130443-13130462 | MS.gene35824:CDS | 40.0% |
| !!! | CACCTTCTCCACATTTTTTG+TGG | - | chr2.1:13132633-13132652 | None:intergenic | 40.0% |
| AAGTACTTTCGTCATGCGAC+AGG | + | chr2.1:13131846-13131865 | MS.gene35824:CDS | 45.0% | |
| AGACTATGCTGTGGTACAAC+AGG | + | chr2.1:13132084-13132103 | MS.gene35824:CDS | 45.0% | |
| AGATTGCTAGCTAGTTGAGG+AGG | - | chr2.1:13132270-13132289 | None:intergenic | 45.0% | |
| ATGCATCCGATGTATACTCG+TGG | - | chr2.1:13131643-13131662 | None:intergenic | 45.0% | |
| CTGGTGACATCTTGGAAAAC+AGG | + | chr2.1:13130806-13130825 | MS.gene35824:intron | 45.0% | |
| GACTTAAACCCCAAGCAAGT+TGG | - | chr2.1:13132328-13132347 | None:intergenic | 45.0% | |
| GAGAAGGTGAGAAAGCTTTG+TGG | + | chr2.1:13132644-13132663 | MS.gene35824:CDS | 45.0% | |
| GATGATCGTAGACTATGCTG+TGG | + | chr2.1:13132075-13132094 | MS.gene35824:CDS | 45.0% | |
| GGACATGCAGTGGAATTTGT+AGG | + | chr2.1:13132584-13132603 | MS.gene35824:CDS | 45.0% | |
| GGACCGTCAATACATTCCTA+AGG | + | chr2.1:13132168-13132187 | MS.gene35824:intron | 45.0% | |
| GGTACCATGAACCAGAATAC+TGG | + | chr2.1:13131802-13131821 | MS.gene35824:CDS | 45.0% | |
| TTGTGAATGGAAGGCTCAAG+CGG | + | chr2.1:13132534-13132553 | MS.gene35824:CDS | 45.0% | |
| ! | AATGCCCTCTAGAAAGGCTT+AGG | + | chr2.1:13132196-13132215 | MS.gene35824:intron | 45.0% |
| ! | CCCCTTTTGGATCATTCTCA+AGG | + | chr2.1:13132381-13132400 | MS.gene35824:intron | 45.0% |
| ! | GGGGTATTTATAGCGCTTTG+TGG | - | chr2.1:13132365-13132384 | None:intergenic | 45.0% |
| CGGATGCATGAAATCTGGAC+CGG | + | chr2.1:13131654-13131673 | MS.gene35824:CDS | 50.0% | |
| CTGCCTCAATAGCTCGATCT+AGG | - | chr2.1:13131117-13131136 | None:intergenic | 50.0% | |
| GAAGTGAAGCGCGATACGAA+AGG | + | chr2.1:13130191-13130210 | MS.gene35824:CDS | 50.0% | |
| TGAACCTTGTGGCATCCAAG+TGG | - | chr2.1:13130523-13130542 | None:intergenic | 50.0% | |
| TGTGAATGGAAGGCTCAAGC+GGG | + | chr2.1:13132535-13132554 | MS.gene35824:CDS | 50.0% | |
| ! | ATCTAGGATACCACCTGTCG+TGG | - | chr2.1:13131101-13131120 | None:intergenic | 50.0% |
| CCTGTCGTGGCACTAGAGAA+AGG | - | chr2.1:13131088-13131107 | None:intergenic | 55.0% | |
| CCTTTCTCTAGTGCCACGAC+AGG | + | chr2.1:13131085-13131104 | MS.gene35824:intron | 55.0% | |
| GGCGCCTAAGCCTTTCTAGA+GGG | - | chr2.1:13132203-13132222 | None:intergenic | 55.0% | |
| TTCTCTAGTGCCACGACAGG+TGG | + | chr2.1:13131088-13131107 | MS.gene35824:intron | 55.0% | |
| ! | GGCTCGAATGCCCTCTAGAA+AGG | + | chr2.1:13132190-13132209 | MS.gene35824:intron | 55.0% |
| !! | TAGAGGGCATTCGAGCCCTT+AGG | - | chr2.1:13132187-13132206 | None:intergenic | 55.0% |
| CAGAAGGGCTCCTGAGGCAT+AGG | + | chr2.1:13132226-13132245 | MS.gene35824:intron | 60.0% | |
| CTATGCCTCAGGAGCCCTTC+TGG | - | chr2.1:13132228-13132247 | None:intergenic | 60.0% | |
| GAGATTCCGTTCGCGCCACT+TGG | + | chr2.1:13130505-13130524 | MS.gene35824:CDS | 60.0% | |
| GGGCGCCTAAGCCTTTCTAG+AGG | - | chr2.1:13132204-13132223 | None:intergenic | 60.0% | |
| TGGCATCCAAGTGGCGCGAA+CGG | - | chr2.1:13130514-13130533 | None:intergenic | 60.0% | |
| !! | TTGAGGAGGCGCCTCTGGAA+GGG | - | chr2.1:13132256-13132275 | None:intergenic | 60.0% |
| AGGCTTAGGCGCCCTCCAGA+AGG | + | chr2.1:13132210-13132229 | MS.gene35824:intron | 65.0% | |
| CGCGCCACTTGGATGCCACA+AGG | + | chr2.1:13130516-13130535 | MS.gene35824:CDS | 65.0% | |
| GCCTCAGGAGCCCTTCTGGA+GGG | - | chr2.1:13132224-13132243 | None:intergenic | 65.0% | |
| GGCTTAGGCGCCCTCCAGAA+GGG | + | chr2.1:13132211-13132230 | MS.gene35824:intron | 65.0% | |
| TGCCTCAGGAGCCCTTCTGG+AGG | - | chr2.1:13132225-13132244 | None:intergenic | 65.0% | |
| !! | GCTAGTTGAGGAGGCGCCTC+TGG | - | chr2.1:13132261-13132280 | None:intergenic | 65.0% |
| !! | GTTGAGGAGGCGCCTCTGGA+AGG | - | chr2.1:13132257-13132276 | None:intergenic | 65.0% |
| GCATAGGCGCGCCCTTCCAG+AGG | + | chr2.1:13132242-13132261 | MS.gene35824:intron | 70.0% | |
| GCCCTCCAGAAGGGCTCCTG+AGG | + | chr2.1:13132220-13132239 | MS.gene35824:intron | 70.0% | |
| ! | GAAGGGCGCGCCTATGCCTC+AGG | - | chr2.1:13132239-13132258 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.1 | gene | 13130179 | 13132681 | 13130179 | ID=MS.gene35824 |
| chr2.1 | mRNA | 13130179 | 13132681 | 13130179 | ID=MS.gene35824.t1;Parent=MS.gene35824 |
| chr2.1 | exon | 13130179 | 13130240 | 13130179 | ID=MS.gene35824.t1.exon1;Parent=MS.gene35824.t1 |
| chr2.1 | CDS | 13130179 | 13130240 | 13130179 | ID=cds.MS.gene35824.t1;Parent=MS.gene35824.t1 |
| chr2.1 | exon | 13130326 | 13130537 | 13130326 | ID=MS.gene35824.t1.exon2;Parent=MS.gene35824.t1 |
| chr2.1 | CDS | 13130326 | 13130537 | 13130326 | ID=cds.MS.gene35824.t1;Parent=MS.gene35824.t1 |
| chr2.1 | exon | 13130828 | 13130891 | 13130828 | ID=MS.gene35824.t1.exon3;Parent=MS.gene35824.t1 |
| chr2.1 | CDS | 13130828 | 13130891 | 13130828 | ID=cds.MS.gene35824.t1;Parent=MS.gene35824.t1 |
| chr2.1 | exon | 13131096 | 13131168 | 13131096 | ID=MS.gene35824.t1.exon4;Parent=MS.gene35824.t1 |
| chr2.1 | CDS | 13131096 | 13131168 | 13131096 | ID=cds.MS.gene35824.t1;Parent=MS.gene35824.t1 |
| chr2.1 | exon | 13131273 | 13131393 | 13131273 | ID=MS.gene35824.t1.exon5;Parent=MS.gene35824.t1 |
| chr2.1 | CDS | 13131273 | 13131393 | 13131273 | ID=cds.MS.gene35824.t1;Parent=MS.gene35824.t1 |
| chr2.1 | exon | 13131602 | 13131689 | 13131602 | ID=MS.gene35824.t1.exon6;Parent=MS.gene35824.t1 |
| chr2.1 | CDS | 13131602 | 13131689 | 13131602 | ID=cds.MS.gene35824.t1;Parent=MS.gene35824.t1 |
| chr2.1 | exon | 13131794 | 13131919 | 13131794 | ID=MS.gene35824.t1.exon7;Parent=MS.gene35824.t1 |
| chr2.1 | CDS | 13131794 | 13131919 | 13131794 | ID=cds.MS.gene35824.t1;Parent=MS.gene35824.t1 |
| chr2.1 | exon | 13131999 | 13132105 | 13131999 | ID=MS.gene35824.t1.exon8;Parent=MS.gene35824.t1 |
| chr2.1 | CDS | 13131999 | 13132105 | 13131999 | ID=cds.MS.gene35824.t1;Parent=MS.gene35824.t1 |
| chr2.1 | exon | 13132533 | 13132681 | 13132533 | ID=MS.gene35824.t1.exon9;Parent=MS.gene35824.t1 |
| chr2.1 | CDS | 13132533 | 13132681 | 13132533 | ID=cds.MS.gene35824.t1;Parent=MS.gene35824.t1 |
| Gene Sequence |
| Protein sequence |
