AlfalfaGEDB | MS.gene062983

M. sativa cultivar XinJiangDaYe / MS.gene062983

KEGG: K14488
GO: GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0010033 GO:0042221 GO:0050896
PFAM: PF02519.17

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062983.t1	AES89311.1	86.7	90	12	0	1	90	1	90	4.00E-37	163.7

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062983.t1	P33080	71.1	90	24	1	1	88	1	90	1.6e-31	136.3

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062983.t1	G7JL36	86.7	90	12	0	1	90	1	90	2.9e-37	163.7

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene057784	MS.gene062983	0.821096	4.84E-53	-1.69E-46
MS.gene059807	MS.gene062983	0.803878	2.83E-49	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene045362	MS.gene062983	PPI
MS.gene77523	MS.gene062983	PPI
MS.gene003587	MS.gene062983	PPI
MS.gene003590	MS.gene062983	PPI
MS.gene045368	MS.gene062983	PPI
MS.gene063112	MS.gene062983	PPI
MS.gene062983	MS.gene50764	PPI
MS.gene79891	MS.gene062983	PPI
MS.gene79890	MS.gene062983	PPI
MS.gene79887	MS.gene062983	PPI
MS.gene062973	MS.gene062983	PPI
MS.gene77526	MS.gene062983	PPI
MS.gene047517	MS.gene062983	PPI
MS.gene062983	MS.gene75672	PPI
MS.gene045360	MS.gene062983	PPI
MS.gene014669	MS.gene062983	PPI
MS.gene057818	MS.gene062983	PPI
MS.gene062983	MS.gene014670	PPI
MS.gene68162	MS.gene062983	PPI
MS.gene014223	MS.gene062983	PPI
MS.gene50687	MS.gene062983	PPI
MS.gene75677	MS.gene062983	PPI
MS.gene057795	MS.gene062983	PPI
MS.gene68165	MS.gene062983	PPI
MS.gene062983	MS.gene75679	PPI
MS.gene045361	MS.gene062983	PPI
MS.gene50675	MS.gene062983	PPI
MS.gene003591	MS.gene062983	PPI
MS.gene062979	MS.gene062983	PPI
MS.gene40325	MS.gene062983	PPI
MS.gene062943	MS.gene062983	PPI
MS.gene062983	MS.gene50684	PPI
MS.gene01358	MS.gene062983	PPI
MS.gene014668	MS.gene062983	PPI
MS.gene003608	MS.gene062983	PPI
MS.gene003583	MS.gene062983	PPI
MS.gene062983	MS.gene79886	PPI
MS.gene062983	MS.gene014671	PPI
MS.gene79888	MS.gene062983	PPI
MS.gene062983	MS.gene50765	PPI
MS.gene40326	MS.gene062983	PPI
MS.gene77527	MS.gene062983	PPI
MS.gene50654	MS.gene062983	PPI
MS.gene062983	MS.gene062974	PPI
MS.gene50676	MS.gene062983	PPI
MS.gene003614	MS.gene062983	PPI
MS.gene057797	MS.gene062983	PPI
MS.gene50652	MS.gene062983	PPI
MS.gene23370	MS.gene062983	PPI
MS.gene50766	MS.gene062983	PPI
MS.gene003594	MS.gene062983	PPI
MS.gene003596	MS.gene062983	PPI
MS.gene062983	MS.gene045367	PPI
MS.gene50665	MS.gene062983	PPI
MS.gene79889	MS.gene062983	PPI
MS.gene50677	MS.gene062983	PPI
MS.gene003625	MS.gene062983	PPI
MS.gene68759	MS.gene062983	PPI
MS.gene003586	MS.gene062983	PPI
MS.gene01764	MS.gene062983	PPI
MS.gene062983	MS.gene002380	PPI
MS.gene50763	MS.gene062983	PPI
MS.gene045365	MS.gene062983	PPI
MS.gene79885	MS.gene062983	PPI
MS.gene50659	MS.gene062983	PPI
MS.gene75316	MS.gene062983	PPI
MS.gene062983	MS.gene75315	PPI
MS.gene057790	MS.gene062983	PPI
MS.gene062952	MS.gene062983	PPI
MS.gene045363	MS.gene062983	PPI
MS.gene003624	MS.gene062983	PPI
MS.gene23371	MS.gene062983	PPI
MS.gene031199	MS.gene062983	PPI
MS.gene75314	MS.gene062983	PPI
MS.gene77529	MS.gene062983	PPI
MS.gene68761	MS.gene062983	PPI
MS.gene014667	MS.gene062983	PPI
MS.gene68760	MS.gene062983	PPI
MS.gene75676	MS.gene062983	PPI
MS.gene062951	MS.gene062983	PPI
MS.gene057778	MS.gene062983	PPI
MS.gene062988	MS.gene062983	PPI
MS.gene75673	MS.gene062983	PPI
MS.gene045366	MS.gene062983	PPI
MS.gene062983	MS.gene057808	PPI
MS.gene062963	MS.gene062983	PPI
MS.gene77528	MS.gene062983	PPI
MS.gene68164	MS.gene062983	PPI
MS.gene031198	MS.gene062983	PPI
MS.gene75674	MS.gene062983	PPI
MS.gene031200	MS.gene062983	PPI
MS.gene003615	MS.gene062983	PPI
MS.gene045364	MS.gene062983	PPI
MS.gene003602	MS.gene062983	PPI
MS.gene23372	MS.gene062983	PPI
MS.gene062983	MS.gene68163	PPI
MS.gene003627	MS.gene062983	PPI
MS.gene003577	MS.gene062983	PPI
MS.gene77524	MS.gene062983	PPI
MS.gene062984	MS.gene062983	PPI
MS.gene057801	MS.gene062983	PPI
MS.gene014222	MS.gene062983	PPI
MS.gene40327	MS.gene062983	PPI
MS.gene031201	MS.gene062983	PPI
MS.gene75675	MS.gene062983	PPI
MS.gene062983	MS.gene75678	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062983.t1	MTR_4g072370	86.667	90	12	0	1	90	1	90	1.09e-54	164
MS.gene062983.t1	MTR_4g072330	83.333	90	15	0	1	90	1	90	2.56e-53	161
MS.gene062983.t1	MTR_4g072830	86.207	87	12	0	1	87	1	87	5.19e-51	155
MS.gene062983.t1	MTR_4g072580	81.111	90	14	1	1	90	1	87	1.38e-48	149
MS.gene062983.t1	MTR_4g072740	81.818	88	13	1	1	88	1	85	1.93e-48	148
MS.gene062983.t1	MTR_4g072600	81.111	90	14	1	1	90	1	87	2.64e-48	148
MS.gene062983.t1	MTR_4g072630	77.273	88	18	1	1	88	1	86	6.69e-46	142
MS.gene062983.t1	MTR_4g072490	76.136	88	18	1	1	88	1	85	3.09e-45	140
MS.gene062983.t1	MTR_4g072470	78.409	88	16	1	1	88	1	85	2.60e-44	138
MS.gene062983.t1	MTR_4g072870	71.429	91	23	1	1	88	1	91	5.55e-44	137
MS.gene062983.t1	MTR_3g084150	71.111	90	24	1	1	88	1	90	1.45e-43	136
MS.gene062983.t1	MTR_3g084250	73.333	90	22	1	1	88	1	90	1.85e-43	136
MS.gene062983.t1	MTR_3g110032	71.429	91	23	1	1	88	1	91	2.30e-43	136
MS.gene062983.t1	MTR_4g072240	69.231	91	25	1	1	88	1	91	4.41e-43	135
MS.gene062983.t1	MTR_3g084180	70.000	90	25	1	1	88	1	90	7.95e-43	134
MS.gene062983.t1	MTR_3g084170	72.222	90	23	1	1	88	1	90	2.23e-42	133
MS.gene062983.t1	MTR_4g072610	71.111	90	22	1	1	90	1	86	2.38e-42	133
MS.gene062983.t1	MTR_3g110038	72.222	90	23	1	1	88	1	90	2.38e-42	133
MS.gene062983.t1	MTR_4g072880	68.132	91	26	1	1	88	1	91	2.83e-42	133
MS.gene062983.t1	MTR_4g072310	70.330	91	24	1	1	88	1	91	3.53e-42	133
MS.gene062983.t1	MTR_4g072300	68.132	91	26	1	1	88	1	91	4.42e-42	132
MS.gene062983.t1	MTR_4g072570	70.000	90	25	1	1	88	1	90	4.91e-42	132
MS.gene062983.t1	MTR_8g461410	68.889	90	26	1	1	88	1	90	5.55e-42	132
MS.gene062983.t1	MTR_4g072465	71.591	88	23	1	1	88	1	86	5.78e-42	132
MS.gene062983.t1	MTR_4g072650	73.333	90	20	2	1	90	1	86	1.21e-41	131
MS.gene062983.t1	MTR_4g072230	72.527	91	20	2	1	88	1	89	1.46e-41	131
MS.gene062983.t1	MTR_4g072540	75.000	88	20	1	1	88	1	86	2.21e-41	130
MS.gene062983.t1	MTR_3g084240	71.111	90	24	1	1	88	1	90	2.23e-41	131
MS.gene062983.t1	MTR_4g050700	71.429	91	23	1	1	88	1	91	5.41e-41	130
MS.gene062983.t1	MTR_2g012410	71.429	91	23	1	1	88	1	91	5.41e-41	130
MS.gene062983.t1	MTR_4g072500	71.429	91	22	2	1	88	1	90	6.20e-41	130
MS.gene062983.t1	MTR_4g072220	68.132	91	26	1	1	88	1	91	6.82e-41	129
MS.gene062983.t1	MTR_4g072670	76.136	88	19	1	1	88	1	86	6.91e-41	129
MS.gene062983.t1	MTR_4g072890	67.033	91	27	1	1	88	1	91	1.48e-40	129
MS.gene062983.t1	MTR_4g072860	71.429	91	23	1	1	88	1	91	1.79e-40	129
MS.gene062983.t1	MTR_4g072820	75.281	89	17	3	1	88	1	85	2.02e-40	128
MS.gene062983.t1	MTR_4g072250	71.429	91	22	2	1	88	1	90	2.34e-40	128
MS.gene062983.t1	MTR_4g072640	71.429	91	22	2	1	88	1	90	2.49e-40	128
MS.gene062983.t1	MTR_3g084220	68.889	90	26	1	1	88	1	90	3.04e-40	128
MS.gene062983.t1	MTR_4g072510	73.864	88	21	1	1	88	1	86	3.10e-40	128
MS.gene062983.t1	MTR_4g072530	71.429	91	22	2	1	88	1	90	3.94e-40	127
MS.gene062983.t1	MTR_4g072260	65.934	91	28	1	1	88	1	91	7.61e-40	127
MS.gene062983.t1	MTR_4g072270	64.835	91	29	1	1	88	1	91	4.70e-39	125
MS.gene062983.t1	MTR_4g072380	71.111	90	22	2	1	89	1	87	6.05e-39	124
MS.gene062983.t1	MTR_3g084260	69.231	91	25	1	1	88	1	91	8.59e-39	124
MS.gene062983.t1	MTR_3g084190	66.667	90	28	1	1	88	1	90	5.50e-38	122
MS.gene062983.t1	MTR_4g072720	70.455	88	24	1	1	88	1	86	5.63e-38	122
MS.gene062983.t1	MTR_4g072730	64.444	90	30	1	1	88	1	90	5.69e-38	122
MS.gene062983.t1	MTR_8g461420	67.778	90	27	1	1	88	1	90	6.21e-38	122
MS.gene062983.t1	MTR_4g072850	69.565	92	24	1	1	88	1	92	6.23e-38	122
MS.gene062983.t1	MTR_4g072480	63.333	90	31	1	1	88	1	90	7.32e-38	122
MS.gene062983.t1	MTR_3g117630	69.880	83	22	1	9	88	8	90	1.82e-37	121
MS.gene062983.t1	MTR_3g084230	66.667	90	28	1	1	88	1	90	2.64e-37	120
MS.gene062983.t1	MTR_3g084210	65.556	90	29	1	1	88	1	90	2.73e-37	120
MS.gene062983.t1	MTR_4g072590	71.591	88	22	1	1	88	1	85	3.89e-37	120
MS.gene062983.t1	MTR_4g072680	62.222	90	32	1	1	88	1	90	4.67e-37	120
MS.gene062983.t1	MTR_3g110042	68.889	90	24	2	1	87	1	89	4.93e-37	120
MS.gene062983.t1	MTR_5g008350	75.325	77	16	1	1	77	1	74	4.96e-37	119
MS.gene062983.t1	MTR_4g072660	64.773	88	28	1	1	88	1	85	6.69e-37	119
MS.gene062983.t1	MTR_4g072620	61.111	90	33	1	1	88	1	90	7.24e-37	119
MS.gene062983.t1	MTR_4g072450	71.591	88	22	1	1	88	1	85	8.86e-37	119
MS.gene062983.t1	MTR_3g110045	68.182	88	26	1	3	88	62	149	2.03e-36	120
MS.gene062983.t1	MTR_4g072690	70.455	88	23	1	1	88	1	85	4.44e-36	117
MS.gene062983.t1	MTR_3g084160	67.033	91	26	2	1	88	1	90	4.72e-36	117
MS.gene062983.t1	MTR_4g072460	60.000	90	34	1	1	88	1	90	8.26e-36	117
MS.gene062983.t1	MTR_4g072940	68.889	90	24	1	3	88	33	122	3.53e-35	116
MS.gene062983.t1	MTR_5g008360	62.963	81	30	0	8	88	1	81	2.22e-33	110
MS.gene062983.t1	MTR_5g008370	63.333	90	31	1	1	88	1	90	3.49e-33	112
MS.gene062983.t1	MTR_4g072560	53.000	100	35	3	1	89	1	99	2.26e-31	105
MS.gene062983.t1	MTR_4g072910	65.333	75	25	1	14	88	27	100	6.79e-31	105
MS.gene062983.t1	MTR_3g084200	69.444	72	20	1	1	70	1	72	9.83e-31	104
MS.gene062983.t1	MTR_3g117640	50.000	102	39	2	1	90	1	102	5.02e-30	102
MS.gene062983.t1	MTR_4g072770	59.551	89	26	2	1	88	1	80	1.67e-29	100
MS.gene062983.t1	MTR_4g072980	52.174	92	39	2	1	87	1	92	1.99e-29	100
MS.gene062983.t1	MTR_4g072280	64.000	75	24	1	1	72	1	75	4.49e-29	99.8
MS.gene062983.t1	MTR_4g072550	63.380	71	26	0	18	88	31	101	5.25e-29	100
MS.gene062983.t1	MTR_4g072290	55.682	88	28	2	1	88	1	77	1.64e-26	93.2
MS.gene062983.t1	MTR_4g072750	65.333	75	20	2	1	70	1	74	7.05e-26	91.7
MS.gene062983.t1	MTR_3g110035	55.294	85	32	1	4	88	58	136	3.14e-25	91.7
MS.gene062983.t1	MTR_6g077850	56.716	67	29	0	22	88	33	99	2.26e-24	88.6
MS.gene062983.t1	MTR_4g072190	49.451	91	38	3	4	87	10	99	5.74e-23	84.7
MS.gene062983.t1	MTR_4g072930	51.220	82	35	2	13	89	30	111	6.88e-23	85.1
MS.gene062983.t1	MTR_3g113310	56.716	67	28	1	21	87	40	105	1.29e-22	84.0
MS.gene062983.t1	MTR_3g117610	60.000	65	25	1	21	85	43	106	1.54e-22	84.0
MS.gene062983.t1	MTR_8g461400	50.000	90	17	2	1	88	1	64	2.64e-21	79.7
MS.gene062983.t1	MTR_4g072840	47.727	88	18	2	1	88	1	60	2.19e-19	74.7
MS.gene062983.t1	MTR_1g094750	50.000	74	34	2	12	83	37	109	7.54e-19	74.7
MS.gene062983.t1	MTR_5g021820	47.436	78	40	1	10	87	27	103	2.07e-18	73.6
MS.gene062983.t1	MTR_1g063950	49.275	69	34	1	15	83	40	107	2.58e-18	73.6
MS.gene062983.t1	MTR_8g076040	46.067	89	36	2	8	85	15	102	4.92e-18	72.4
MS.gene062983.t1	MTR_7g101740	56.250	64	27	1	22	85	39	101	5.62e-18	72.4
MS.gene062983.t1	MTR_8g461210	57.627	59	24	1	22	80	34	91	5.91e-18	72.4
MS.gene062983.t1	MTR_2g043960	57.627	59	24	1	22	80	75	132	6.87e-18	73.6
MS.gene062983.t1	MTR_4g124750	55.932	59	25	1	22	80	68	125	6.24e-17	70.9
MS.gene062983.t1	MTR_4g072160	45.679	81	41	2	4	83	18	96	1.05e-16	70.1
MS.gene062983.t1	MTR_1g061570	53.226	62	28	1	22	83	18	78	2.05e-16	68.9
MS.gene062983.t1	MTR_4g025830	47.887	71	33	2	20	87	76	145	2.80e-16	69.3
MS.gene062983.t1	MTR_3g092220	42.308	78	42	2	14	89	24	100	4.10e-16	67.8
MS.gene062983.t1	MTR_1g024085	43.902	82	40	2	4	80	13	93	6.67e-16	68.2
MS.gene062983.t1	MTR_4g005310	53.226	62	28	1	23	83	62	123	9.81e-16	67.8
MS.gene062983.t1	MTR_7g118010	45.588	68	34	2	23	88	23	89	2.38e-15	65.5
MS.gene062983.t1	MTR_0388s0020	41.026	78	42	2	13	87	65	141	6.31e-15	65.9
MS.gene062983.t1	MTR_2g066830	39.773	88	48	2	2	89	41	123	2.03e-14	64.3
MS.gene062983.t1	MTR_1g009150	45.946	74	39	1	10	83	58	130	2.20e-14	64.7
MS.gene062983.t1	MTR_8g026730	44.118	68	35	2	23	88	27	93	5.22e-14	62.4
MS.gene062983.t1	MTR_8g096470	45.000	60	32	1	24	83	47	105	1.38e-13	61.2
MS.gene062983.t1	MTR_8g096440	40.000	80	44	2	4	83	29	104	2.30e-13	61.6
MS.gene062983.t1	MTR_7g405740	47.541	61	31	1	23	83	67	126	3.41e-13	61.6
MS.gene062983.t1	MTR_4g005320	50.000	58	28	1	23	80	70	126	1.24e-12	60.1
MS.gene062983.t1	MTR_8g096500	45.902	61	32	1	23	83	49	108	2.07e-12	59.3
MS.gene062983.t1	MTR_3g109160	50.820	61	29	1	23	83	69	128	2.32e-12	59.3
MS.gene062983.t1	MTR_8g101520	43.077	65	36	1	24	88	51	114	9.64e-12	57.8
MS.gene062983.t1	MTR_3g098970	34.211	76	49	1	13	88	43	117	1.06e-11	57.4
MS.gene062983.t1	MTR_5g008380	78.125	32	7	0	57	88	246	277	1.25e-11	58.9
MS.gene062983.t1	MTR_1g059770	38.462	65	39	1	23	87	49	112	2.36e-11	55.8
MS.gene062983.t1	MTR_2g095430	41.096	73	38	2	8	76	30	101	2.86e-11	55.8
MS.gene062983.t1	MTR_7g101890	38.571	70	40	2	9	76	38	106	5.57e-11	54.7
MS.gene062983.t1	MTR_3g105900	63.415	41	15	0	22	62	1171	1211	7.04e-11	57.0

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene062983.t1	AT4G38840	53.000	100	34	3	1	88	1	99	8.66e-32	107
MS.gene062983.t1	AT5G18020	57.317	82	30	2	8	88	13	90	4.56e-29	100
MS.gene062983.t1	AT5G18080	58.667	75	30	1	15	88	16	90	4.74e-29	100
MS.gene062983.t1	AT2G21210	50.000	96	39	3	1	88	1	95	8.81e-29	99.8
MS.gene062983.t1	AT4G34770	62.963	81	28	1	10	88	22	102	1.18e-28	99.4
MS.gene062983.t1	AT2G21200	57.500	80	33	1	9	87	7	86	1.48e-28	98.6
MS.gene062983.t1	AT5G18060	56.098	82	31	2	8	88	13	90	1.76e-28	98.6
MS.gene062983.t1	AT4G34800	58.333	84	30	2	1	81	1	82	1.79e-28	98.6
MS.gene062983.t1	AT5G18050	54.878	82	32	2	8	88	13	90	2.24e-28	98.2
MS.gene062983.t1	AT3G03840	61.111	72	26	1	19	88	23	94	2.88e-28	98.2
MS.gene062983.t1	AT2G21210	50.000	96	39	3	1	88	68	162	3.12e-28	100
MS.gene062983.t1	AT4G38850	54.762	84	28	2	8	88	13	89	4.96e-28	97.4
MS.gene062983.t1	AT4G38825	57.333	75	31	1	15	88	15	89	5.78e-28	97.1
MS.gene062983.t1	AT4G34810	65.714	70	19	2	23	87	48	117	1.17e-27	97.4
MS.gene062983.t1	AT5G18030	59.722	72	28	1	18	88	17	88	1.40e-27	96.3
MS.gene062983.t1	AT5G18010	56.000	75	32	1	15	88	16	90	1.80e-27	95.9
MS.gene062983.t1	AT3G03820	52.222	90	40	1	2	88	6	95	1.07e-26	94.4
MS.gene062983.t1	AT3G03850	61.194	67	24	1	24	88	26	92	1.49e-25	91.3
MS.gene062983.t1	AT4G34780	62.857	70	23	1	21	87	26	95	2.14e-25	91.3
MS.gene062983.t1	AT4G13790	47.126	87	41	2	3	87	8	91	5.63e-25	89.7
MS.gene062983.t1	AT4G34790	60.870	69	25	1	23	89	39	107	2.50e-24	88.6
MS.gene062983.t1	AT4G38860	55.882	68	30	0	21	88	38	105	1.88e-22	83.6
MS.gene062983.t1	AT3G03830	48.276	87	34	2	5	88	14	92	3.82e-22	82.4
MS.gene062983.t1	AT2G37030	56.338	71	30	1	14	84	40	109	3.16e-21	81.3
MS.gene062983.t1	AT1G75580	58.209	67	27	1	21	87	42	107	1.03e-20	79.3
MS.gene062983.t1	AT2G21220	45.556	90	41	2	5	87	15	103	1.16e-20	79.3
MS.gene062983.t1	AT4G34760	45.652	92	40	2	5	87	16	106	1.54e-20	79.0
MS.gene062983.t1	AT3G43120	53.030	66	30	1	15	80	71	135	2.90e-19	77.0
MS.gene062983.t1	AT3G12830	44.318	88	44	2	2	89	33	115	6.88e-18	72.8
MS.gene062983.t1	AT1G19830	52.239	67	31	1	21	87	46	111	8.57e-18	72.4
MS.gene062983.t1	AT5G20810	53.030	66	30	1	15	80	71	135	1.15e-17	73.2
MS.gene062983.t1	AT2G16580	44.318	88	38	2	8	85	19	105	1.33e-17	71.6
MS.gene062983.t1	AT5G20810	53.030	66	30	1	15	80	71	135	1.54e-17	73.6
MS.gene062983.t1	AT3G53250	50.794	63	27	1	22	84	51	109	2.73e-17	71.2
MS.gene062983.t1	AT4G36110	45.349	86	41	2	5	85	17	101	2.84e-17	70.5
MS.gene062983.t1	AT3G53250	50.794	63	27	1	22	84	82	140	4.58e-17	71.2
MS.gene062983.t1	AT5G66260	42.697	89	45	2	5	88	11	98	5.91e-17	69.7
MS.gene062983.t1	AT3G20220	49.275	69	33	2	23	90	47	114	1.03e-16	69.3
MS.gene062983.t1	AT1G75590	44.048	84	39	2	4	80	16	98	5.51e-16	68.6
MS.gene062983.t1	AT2G18010	51.562	64	30	1	22	85	47	109	6.38e-16	67.4
MS.gene062983.t1	AT4G34750	43.478	69	38	1	22	90	36	103	6.91e-16	68.2
MS.gene062983.t1	AT4G34750	43.478	69	38	1	22	90	36	103	6.91e-16	68.2
MS.gene062983.t1	AT1G16510	49.254	67	33	1	23	89	54	119	2.36e-15	66.6
MS.gene062983.t1	AT5G10990	47.143	70	36	1	11	80	29	97	4.90e-15	65.9
MS.gene062983.t1	AT3G61900	45.570	79	38	3	14	88	20	97	6.56e-15	65.5
MS.gene062983.t1	AT3G51200	50.794	63	29	2	22	83	38	99	8.07e-15	64.3
MS.gene062983.t1	AT1G56150	46.269	67	35	1	23	89	38	103	8.23e-15	64.3
MS.gene062983.t1	AT1G19840	43.373	83	40	2	4	80	16	97	8.90e-15	65.5
MS.gene062983.t1	AT5G03310	51.471	68	26	3	22	83	38	104	2.27e-14	63.5
MS.gene062983.t1	AT2G46690	40.506	79	43	2	13	88	14	91	4.69e-14	62.8
MS.gene062983.t1	AT4G12410	42.500	80	42	2	11	87	64	142	1.39e-13	62.4
MS.gene062983.t1	AT2G45210	42.466	73	38	2	18	87	74	145	2.54e-13	62.0
MS.gene062983.t1	AT3G60690	44.928	69	34	2	23	88	88	155	2.60e-13	62.0
MS.gene062983.t1	AT1G79130	41.250	80	41	2	8	87	38	111	4.73e-13	60.5
MS.gene062983.t1	AT4G00880	53.333	60	25	2	23	80	28	86	1.59e-12	58.9
MS.gene062983.t1	AT4G22620	43.056	72	37	2	19	87	75	145	2.45e-12	59.3
MS.gene062983.t1	AT5G53590	41.667	72	36	2	22	88	45	115	4.95e-12	58.2
MS.gene062983.t1	AT3G09870	49.206	63	29	2	16	76	38	99	1.72e-11	55.8
MS.gene062983.t1	AT4G31320	47.541	61	31	1	23	83	80	139	2.01e-11	57.4
MS.gene062983.t1	AT2G24400	49.180	61	30	1	23	83	64	123	2.95e-11	56.6
MS.gene062983.t1	AT2G36210	33.735	83	55	0	8	90	39	121	7.15e-11	55.1

Find 22 sgRNAs with CRISPR-Local

Find 23 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GTTTACCTGGTATCATTAGA+AGG	0.305364	4.2:-35394214	MS.gene062983:CDS
AATCAAGCTGAGGAACAATT+TGG	0.330842	4.2:-35394059	MS.gene062983:CDS
GCAATTCTTGAAACAATGGT+TGG	0.491830	4.2:+35394084	None:intergenic
TCAAAACAAGCATCTTCAAA+AGG	0.508704	4.2:-35394188	MS.gene062983:CDS
TTCAGCAATTCTTGAAACAA+TGG	0.512470	4.2:+35394080	None:intergenic
TTTGGATATGATCATCCAAC+GGG	0.521338	4.2:-35394041	MS.gene062983:CDS
AAGAAAACGTCTTCTCTACA+AGG	0.526143	4.2:+35394005	None:intergenic
GGATACCTTGCAGTATATGT+TGG	0.528219	4.2:-35394149	MS.gene062983:CDS
AAAAGGCATGGATGTGCCAA+AGG	0.533320	4.2:-35394171	MS.gene062983:CDS
ACAAGCATCTTCAAAAGGCA+TGG	0.535432	4.2:-35394183	MS.gene062983:CDS
TTTACCTGGTATCATTAGAA+GGG	0.541489	4.2:-35394213	MS.gene062983:CDS
TATACTGCAAGGTATCCCTT+TGG	0.555072	4.2:+35394155	None:intergenic
GAGGCCCTTCTAATGATACC+AGG	0.576880	4.2:+35394209	None:intergenic
AAAGGCATGGATGTGCCAAA+GGG	0.593194	4.2:-35394170	MS.gene062983:CDS
CCTTGCAGTATATGTTGGAG+AGG	0.605007	4.2:-35394144	MS.gene062983:CDS
CCTCTCCAACATATACTGCA+AGG	0.627279	4.2:+35394144	None:intergenic
ATTTGGATATGATCATCCAA+CGG	0.628419	4.2:-35394042	MS.gene062983:CDS
AGAATTGCTGAATCAAGCTG+AGG	0.644376	4.2:-35394069	MS.gene062983:CDS
AGAAAACGTCTTCTCTACAA+GGG	0.654570	4.2:+35394006	None:intergenic
GGGATTGTGAGACCACCCGT+TGG	0.658136	4.2:+35394026	None:intergenic
ATGTTGGAGAGGAAATGAAG+CGG	0.662900	4.2:-35394133	MS.gene062983:CDS
GGATATGATCATCCAACGGG+TGG	0.666271	4.2:-35394038	MS.gene062983:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
	ATTTGGATATGATCATCCAA+CGG	-	chr4.2:35394156-35394175	MS.gene062983:CDS	30.0%
	TCAAAACAAGCATCTTCAAA+AGG	-	chr4.2:35394010-35394029	MS.gene062983:CDS	30.0%
	TTCAGCAATTCTTGAAACAA+TGG	+	chr4.2:35394121-35394140	None:intergenic	30.0%
	TTTACCTGGTATCATTAGAA+GGG	-	chr4.2:35393985-35394004	MS.gene062983:CDS	30.0%
!!!	TTTTGAAGATGCTTGTTTTG+AGG	+	chr4.2:35394011-35394030	None:intergenic	30.0%
	AAGAAAACGTCTTCTCTACA+AGG	+	chr4.2:35394196-35394215	None:intergenic	35.0%
	AATCAAGCTGAGGAACAATT+TGG	-	chr4.2:35394139-35394158	MS.gene062983:CDS	35.0%
	AGAAAACGTCTTCTCTACAA+GGG	+	chr4.2:35394195-35394214	None:intergenic	35.0%
	GCAATTCTTGAAACAATGGT+TGG	+	chr4.2:35394117-35394136	None:intergenic	35.0%
	GTTTACCTGGTATCATTAGA+AGG	-	chr4.2:35393984-35394003	MS.gene062983:CDS	35.0%
	TTTGGATATGATCATCCAAC+GGG	-	chr4.2:35394157-35394176	MS.gene062983:CDS	35.0%
	ACAAGCATCTTCAAAAGGCA+TGG	-	chr4.2:35394015-35394034	MS.gene062983:CDS	40.0%
	AGAATTGCTGAATCAAGCTG+AGG	-	chr4.2:35394129-35394148	MS.gene062983:CDS	40.0%
	ATGTTGGAGAGGAAATGAAG+CGG	-	chr4.2:35394065-35394084	MS.gene062983:CDS	40.0%
	GGATACCTTGCAGTATATGT+TGG	-	chr4.2:35394049-35394068	MS.gene062983:CDS	40.0%
!	TATACTGCAAGGTATCCCTT+TGG	+	chr4.2:35394046-35394065	None:intergenic	40.0%
	CCTCTCCAACATATACTGCA+AGG	+	chr4.2:35394057-35394076	None:intergenic	45.0%
	CCTTGCAGTATATGTTGGAG+AGG	-	chr4.2:35394054-35394073	MS.gene062983:CDS	45.0%
!	AAAAGGCATGGATGTGCCAA+AGG	-	chr4.2:35394027-35394046	MS.gene062983:CDS	45.0%
!	AAAGGCATGGATGTGCCAAA+GGG	-	chr4.2:35394028-35394047	MS.gene062983:CDS	45.0%
	GAGGCCCTTCTAATGATACC+AGG	+	chr4.2:35393992-35394011	None:intergenic	50.0%
	GGATATGATCATCCAACGGG+TGG	-	chr4.2:35394160-35394179	MS.gene062983:CDS	50.0%
	GGGATTGTGAGACCACCCGT+TGG	+	chr4.2:35394175-35394194	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.2	gene	35393974	35394246	35393974	ID=MS.gene062983
chr4.2	mRNA	35393974	35394246	35393974	ID=MS.gene062983.t1;Parent=MS.gene062983
chr4.2	exon	35393974	35394246	35393974	ID=MS.gene062983.t1.exon1;Parent=MS.gene062983.t1
chr4.2	CDS	35393974	35394246	35393974	ID=cds.MS.gene062983.t1;Parent=MS.gene062983.t1

Gene Sequence	>MS.gene062983 ATGGGTTTTCGTTTACCTGGTATCATTAGAAGGGCCTCAAAACAAGCATCTTCAAAAGGCATGGATGTGCCAAAGGGATACCTTGCAGTATATGTTGGAGAGGAAATGAAGCGGTTTGTGATATCAATTTCTTTGTTGAACCAACCATTGTTTCAAGAATTGCTGAATCAAGCTGAGGAACAATTTGGATATGATCATCCAACGGGTGGTCTCACAATCCCTTGTAGAGAAGACGTTTTCTTAGATGTTACTTCTCGTTTAAATCTGTGCTAA
Protein sequence	>MS.gene062983.t1 MGFRLPGIIRRASKQASSKGMDVPKGYLAVYVGEEMKRFVISISLLNQPLFQELLNQAEEQFGYDHPTGGLTIPCREDVFLDVTSRLNLC