Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065159.t1 | XP_003592629.1 | 93 | 401 | 1 | 1 | 16 | 416 | 41 | 414 | 2.20E-183 | 651.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065159.t1 | Q9ZSY2 | 79.8 | 401 | 47 | 4 | 16 | 415 | 42 | 409 | 2.5e-159 | 563.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065159.t1 | G7IC93 | 93.0 | 401 | 1 | 1 | 16 | 416 | 41 | 414 | 1.6e-183 | 651.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene065159 | 0.834946 | 2.23E-56 | -1.69E-46 |
| MS.gene049254 | MS.gene065159 | 0.814308 | 1.65E-51 | -1.69E-46 |
| MS.gene049283 | MS.gene065159 | 0.836468 | 9.19E-57 | -1.69E-46 |
| MS.gene049368 | MS.gene065159 | 0.82715 | 1.83E-54 | -1.69E-46 |
| MS.gene049499 | MS.gene065159 | 0.804113 | 2.52E-49 | -1.69E-46 |
| MS.gene049983 | MS.gene065159 | 0.839965 | 1.16E-57 | -1.69E-46 |
| MS.gene04998 | MS.gene065159 | 0.813911 | 2.01E-51 | -1.69E-46 |
| MS.gene050114 | MS.gene065159 | 0.838661 | 2.52E-57 | -1.69E-46 |
| MS.gene050439 | MS.gene065159 | 0.803005 | 4.29E-49 | -1.69E-46 |
| MS.gene050654 | MS.gene065159 | 0.848256 | 6.88E-60 | -1.69E-46 |
| MS.gene050838 | MS.gene065159 | 0.811235 | 7.75E-51 | -1.69E-46 |
| MS.gene050941 | MS.gene065159 | 0.811633 | 6.35E-51 | -1.69E-46 |
| MS.gene051003 | MS.gene065159 | 0.829293 | 5.58E-55 | -1.69E-46 |
| MS.gene051184 | MS.gene065159 | 0.810888 | 9.22E-51 | -1.69E-46 |
| MS.gene051234 | MS.gene065159 | 0.803463 | 3.44E-49 | -1.69E-46 |
| MS.gene051343 | MS.gene065159 | 0.815631 | 8.38E-52 | -1.69E-46 |
| MS.gene051541 | MS.gene065159 | 0.804134 | 2.50E-49 | -1.69E-46 |
| MS.gene051676 | MS.gene065159 | 0.802469 | 5.53E-49 | -1.69E-46 |
| MS.gene051744 | MS.gene065159 | 0.809206 | 2.12E-50 | -1.69E-46 |
| MS.gene051852 | MS.gene065159 | 0.81596 | 7.07E-52 | -1.69E-46 |
| MS.gene05188 | MS.gene065159 | 0.805172 | 1.52E-49 | -1.69E-46 |
| MS.gene051975 | MS.gene065159 | 0.843841 | 1.09E-58 | -1.69E-46 |
| MS.gene052016 | MS.gene065159 | 0.806564 | 7.74E-50 | -1.69E-46 |
| MS.gene052052 | MS.gene065159 | 0.828246 | 1.00E-54 | -1.69E-46 |
| MS.gene052072 | MS.gene065159 | 0.801105 | 1.05E-48 | -1.69E-46 |
| MS.gene052307 | MS.gene065159 | 0.848552 | 5.70E-60 | -1.69E-46 |
| MS.gene052342 | MS.gene065159 | 0.825763 | 3.93E-54 | -1.69E-46 |
| MS.gene052434 | MS.gene065159 | 0.835658 | 1.48E-56 | -1.69E-46 |
| MS.gene052463 | MS.gene065159 | 0.834499 | 2.89E-56 | -1.69E-46 |
| MS.gene052493 | MS.gene065159 | 0.805966 | 1.03E-49 | -1.69E-46 |
| MS.gene052533 | MS.gene065159 | 0.856282 | 3.57E-62 | -1.69E-46 |
| MS.gene052609 | MS.gene065159 | 0.829155 | 6.03E-55 | -1.69E-46 |
| MS.gene052932 | MS.gene065159 | 0.809062 | 2.28E-50 | -1.69E-46 |
| MS.gene053058 | MS.gene065159 | 0.819089 | 1.39E-52 | -1.69E-46 |
| MS.gene053079 | MS.gene065159 | 0.845271 | 4.51E-59 | -1.69E-46 |
| MS.gene053226 | MS.gene065159 | 0.804824 | 1.79E-49 | -1.69E-46 |
| MS.gene053298 | MS.gene065159 | 0.831919 | 1.27E-55 | -1.69E-46 |
| MS.gene053456 | MS.gene065159 | 0.804219 | 2.40E-49 | -1.69E-46 |
| MS.gene053726 | MS.gene065159 | 0.821015 | 5.05E-53 | -1.69E-46 |
| MS.gene053786 | MS.gene065159 | 0.807681 | 4.49E-50 | -1.69E-46 |
| MS.gene053963 | MS.gene065159 | 0.800632 | 1.32E-48 | -1.69E-46 |
| MS.gene054222 | MS.gene065159 | 0.822948 | 1.80E-53 | -1.69E-46 |
| MS.gene054479 | MS.gene065159 | 0.825544 | 4.42E-54 | -1.69E-46 |
| MS.gene054576 | MS.gene065159 | 0.812661 | 3.79E-51 | -1.69E-46 |
| MS.gene05458 | MS.gene065159 | 0.806549 | 7.79E-50 | -1.69E-46 |
| MS.gene054892 | MS.gene065159 | 0.843545 | 1.31E-58 | -1.69E-46 |
| MS.gene054893 | MS.gene065159 | 0.846291 | 2.38E-59 | -1.69E-46 |
| MS.gene05517 | MS.gene065159 | 0.805961 | 1.04E-49 | -1.69E-46 |
| MS.gene055311 | MS.gene065159 | 0.804875 | 1.75E-49 | -1.69E-46 |
| MS.gene055313 | MS.gene065159 | 0.823972 | 1.04E-53 | -1.69E-46 |
| MS.gene055314 | MS.gene065159 | 0.800408 | 1.46E-48 | -1.69E-46 |
| MS.gene055386 | MS.gene065159 | 0.814903 | 1.22E-51 | -1.69E-46 |
| MS.gene055513 | MS.gene065159 | 0.87019 | 1.76E-66 | -1.69E-46 |
| MS.gene055603 | MS.gene065159 | 0.845656 | 3.54E-59 | -1.69E-46 |
| MS.gene055864 | MS.gene065159 | 0.863127 | 3.11E-64 | -1.69E-46 |
| MS.gene056045 | MS.gene065159 | 0.824613 | 7.34E-54 | -1.69E-46 |
| MS.gene056181 | MS.gene065159 | 0.832504 | 9.10E-56 | -1.69E-46 |
| MS.gene056390 | MS.gene065159 | 0.800861 | 1.18E-48 | -1.69E-46 |
| MS.gene056403 | MS.gene065159 | 0.837411 | 5.28E-57 | -1.69E-46 |
| MS.gene056509 | MS.gene065159 | 0.805089 | 1.58E-49 | -1.69E-46 |
| MS.gene056605 | MS.gene065159 | 0.824946 | 6.13E-54 | -1.69E-46 |
| MS.gene056638 | MS.gene065159 | 0.828338 | 9.50E-55 | -1.69E-46 |
| MS.gene056699 | MS.gene065159 | 0.83021 | 3.34E-55 | -1.69E-46 |
| MS.gene056787 | MS.gene065159 | 0.803011 | 4.27E-49 | -1.69E-46 |
| MS.gene056831 | MS.gene065159 | 0.805433 | 1.34E-49 | -1.69E-46 |
| MS.gene05686 | MS.gene065159 | 0.809899 | 1.51E-50 | -1.69E-46 |
| MS.gene056986 | MS.gene065159 | 0.847021 | 1.50E-59 | -1.69E-46 |
| MS.gene057034 | MS.gene065159 | 0.822733 | 2.02E-53 | -1.69E-46 |
| MS.gene057102 | MS.gene065159 | 0.862407 | 5.18E-64 | -1.69E-46 |
| MS.gene057155 | MS.gene065159 | 0.826473 | 2.66E-54 | -1.69E-46 |
| MS.gene057360 | MS.gene065159 | 0.82319 | 1.58E-53 | -1.69E-46 |
| MS.gene057915 | MS.gene065159 | 0.804401 | 2.20E-49 | -1.69E-46 |
| MS.gene058095 | MS.gene065159 | 0.800965 | 1.12E-48 | -1.69E-46 |
| MS.gene058159 | MS.gene065159 | 0.830841 | 2.34E-55 | -1.69E-46 |
| MS.gene058289 | MS.gene065159 | 0.809511 | 1.83E-50 | -1.69E-46 |
| MS.gene058429 | MS.gene065159 | 0.815269 | 1.01E-51 | -1.69E-46 |
| MS.gene058758 | MS.gene065159 | 0.819914 | 9.04E-53 | -1.69E-46 |
| MS.gene059144 | MS.gene065159 | 0.814196 | 1.74E-51 | -1.69E-46 |
| MS.gene059146 | MS.gene065159 | 0.816854 | 4.46E-52 | -1.69E-46 |
| MS.gene059170 | MS.gene065159 | 0.83733 | 5.54E-57 | -1.69E-46 |
| MS.gene059283 | MS.gene065159 | 0.808146 | 3.57E-50 | -1.69E-46 |
| MS.gene05952 | MS.gene065159 | 0.811523 | 6.71E-51 | -1.69E-46 |
| MS.gene059725 | MS.gene065159 | 0.811599 | 6.46E-51 | -1.69E-46 |
| MS.gene059774 | MS.gene065159 | 0.817204 | 3.72E-52 | -1.69E-46 |
| MS.gene05985 | MS.gene065159 | -0.820372 | 7.10E-53 | -1.69E-46 |
| MS.gene059965 | MS.gene065159 | 0.841214 | 5.44E-58 | -1.69E-46 |
| MS.gene06010 | MS.gene065159 | 0.803635 | 3.17E-49 | -1.69E-46 |
| MS.gene06011 | MS.gene065159 | 0.82309 | 1.67E-53 | -1.69E-46 |
| MS.gene060435 | MS.gene065159 | 0.841868 | 3.66E-58 | -1.69E-46 |
| MS.gene06052 | MS.gene065159 | 0.81394 | 1.98E-51 | -1.69E-46 |
| MS.gene060637 | MS.gene065159 | 0.819328 | 1.23E-52 | -1.69E-46 |
| MS.gene060697 | MS.gene065159 | 0.815176 | 1.06E-51 | -1.69E-46 |
| MS.gene060763 | MS.gene065159 | 0.809979 | 1.45E-50 | -1.69E-46 |
| MS.gene060777 | MS.gene065159 | 0.80521 | 1.49E-49 | -1.69E-46 |
| MS.gene060840 | MS.gene065159 | 0.811974 | 5.35E-51 | -1.69E-46 |
| MS.gene060932 | MS.gene065159 | 0.846593 | 1.97E-59 | -1.69E-46 |
| MS.gene060933 | MS.gene065159 | 0.855373 | 6.59E-62 | -1.69E-46 |
| MS.gene060935 | MS.gene065159 | 0.832051 | 1.18E-55 | -1.69E-46 |
| MS.gene060937 | MS.gene065159 | 0.851899 | 6.57E-61 | -1.69E-46 |
| MS.gene061100 | MS.gene065159 | 0.829181 | 5.94E-55 | -1.69E-46 |
| MS.gene061188 | MS.gene065159 | 0.809678 | 1.68E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065159.t1 | MTR_1g110310 | 92.556 | 403 | 3 | 1 | 14 | 416 | 39 | 414 | 0.0 | 756 |
| MS.gene065159.t1 | MTR_5g035770 | 54.684 | 395 | 143 | 3 | 14 | 407 | 48 | 407 | 1.15e-155 | 446 |
| MS.gene065159.t1 | MTR_5g035770 | 54.707 | 393 | 142 | 3 | 16 | 407 | 11 | 368 | 1.20e-155 | 444 |
| MS.gene065159.t1 | MTR_5g035770 | 55.584 | 394 | 133 | 4 | 18 | 407 | 20 | 375 | 1.55e-155 | 444 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065159.t1 | AT1G68370 | 78.465 | 404 | 51 | 5 | 14 | 415 | 40 | 409 | 0.0 | 639 |
| MS.gene065159.t1 | AT1G24120 | 51.923 | 416 | 149 | 3 | 14 | 407 | 43 | 429 | 3.30e-151 | 436 |
| MS.gene065159.t1 | AT1G59980 | 47.891 | 403 | 172 | 4 | 14 | 414 | 46 | 412 | 2.78e-125 | 369 |
| MS.gene065159.t1 | AT1G59980 | 47.532 | 385 | 164 | 4 | 32 | 414 | 1 | 349 | 3.29e-117 | 346 |
| MS.gene065159.t1 | AT1G59980 | 50.915 | 328 | 134 | 1 | 15 | 342 | 47 | 347 | 3.09e-114 | 338 |
Find 92 sgRNAs with CRISPR-Local
Find 295 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACACATATATTTGCCGTTTA+TGG | 0.136662 | 1.2:+81700675 | MS.gene065159:CDS |
| GGAAGTTCTAGCAAAATTTC+TGG | 0.196708 | 1.2:+81701780 | MS.gene065159:CDS |
| CAATGTTTGCAGCTTTATTC+AGG | 0.268018 | 1.2:+81698772 | MS.gene065159:CDS |
| TTCCCCAGGGCTCTCACCTT+TGG | 0.274890 | 1.2:-81701811 | None:intergenic |
| TTTCTTTGTTGCGGGCTGTT+TGG | 0.286699 | 1.2:+81700535 | MS.gene065159:CDS |
| TCAGGCATTGGCACGCTATC+AGG | 0.305387 | 1.2:+81701017 | MS.gene065159:intron |
| TTGAATAGTTCTGAAGCTTC+AGG | 0.318305 | 1.2:-81697858 | None:intergenic |
| GGATTGTTGGCATTCTTGTC+AGG | 0.332047 | 1.2:-81697837 | None:intergenic |
| GTATGGATATTATGTCTATT+TGG | 0.333645 | 1.2:+81700507 | MS.gene065159:CDS |
| GAAATCGATTTATCTAATCT+TGG | 0.354013 | 1.2:+81698738 | MS.gene065159:CDS |
| TTCAAGAACATTAGCCGAAA+TGG | 0.367637 | 1.2:-81698903 | None:intergenic |
| TTCTGAAGCTTCAGGATTGT+TGG | 0.367958 | 1.2:-81697850 | None:intergenic |
| CCCAATCAAGACTACCATTT+CGG | 0.369384 | 1.2:+81698889 | MS.gene065159:CDS |
| TCTTCAACCTTGTGAAGTTT+CGG | 0.371250 | 1.2:+81700638 | MS.gene065159:CDS |
| GCCGAAATGGTAGTCTTGAT+TGG | 0.375333 | 1.2:-81698890 | None:intergenic |
| AGATGGAGGGTCAGATAGTA+AGG | 0.390540 | 1.2:+81701833 | MS.gene065159:CDS |
| ATGGTTCAACCTCAATCTTA+AGG | 0.396575 | 1.2:+81701875 | MS.gene065159:CDS |
| TAAATTATTCAGACCATAAA+CGG | 0.401187 | 1.2:-81700688 | None:intergenic |
| CAACCTCAATCTTAAGGGCT+CGG | 0.401801 | 1.2:+81701881 | MS.gene065159:CDS |
| GGGCTATGGTTTAGCATTGC+AGG | 0.403402 | 1.2:+81699290 | MS.gene065159:CDS |
| AGAAAGCCCTTCAATTTGAA+TGG | 0.413467 | 1.2:+81697521 | MS.gene065159:CDS |
| ATTTCGAACAAGATGCAAAC+GGG | 0.423149 | 1.2:+81699268 | MS.gene065159:CDS |
| GTCATAACCATTCAAATTGA+AGG | 0.429169 | 1.2:-81697528 | None:intergenic |
| AAATCGATTTATCTAATCTT+GGG | 0.433620 | 1.2:+81698739 | MS.gene065159:CDS |
| AACTGCACAAAGCAAATTCA+AGG | 0.433774 | 1.2:+81699163 | MS.gene065159:CDS |
| AATGAGCAGCAAGCTGAGTC+CGG | 0.438090 | 1.2:+81699119 | MS.gene065159:CDS |
| AACCTCAATCTTAAGGGCTC+GGG | 0.448187 | 1.2:+81701882 | MS.gene065159:CDS |
| GTTCTTGAAGAAGCTTTGAA+TGG | 0.448738 | 1.2:+81698917 | MS.gene065159:CDS |
| GGTGAGAGCCCTGGGGAAGA+TGG | 0.452090 | 1.2:+81701816 | MS.gene065159:CDS |
| CCGAAATGGTAGTCTTGATT+GGG | 0.459457 | 1.2:-81698889 | None:intergenic |
| TGGTTCAACCTCAATCTTAA+GGG | 0.459920 | 1.2:+81701876 | MS.gene065159:CDS |
| ACTGGCAAAGTGACATCTGC+TGG | 0.462289 | 1.2:+81700432 | MS.gene065159:CDS |
| TCAGATAGTAAGGATAAATC+AGG | 0.462722 | 1.2:+81701843 | MS.gene065159:CDS |
| ATTCCAAAGGTGAGAGCCCT+GGG | 0.470174 | 1.2:+81701808 | MS.gene065159:CDS |
| TTTATTTGGTAACAGCAAGC+TGG | 0.478612 | 1.2:+81698862 | MS.gene065159:intron |
| TCTGACCCTCCATCTTCCCC+AGG | 0.494682 | 1.2:-81701825 | None:intergenic |
| TGACAATGGTGAAGGTAGAA+TGG | 0.495930 | 1.2:-81701716 | None:intergenic |
| GTACGACAGTGCAGGATTTG+AGG | 0.501253 | 1.2:+81697932 | MS.gene065159:CDS |
| AACCCGAGCCCTTAAGATTG+AGG | 0.504980 | 1.2:-81701884 | None:intergenic |
| ACTGCCACTTCCACTAGTAC+TGG | 0.506538 | 1.2:-81701745 | None:intergenic |
| GATTCCAAAGGTGAGAGCCC+TGG | 0.509111 | 1.2:+81701807 | MS.gene065159:CDS |
| TTATTTGGTAACAGCAAGCT+GGG | 0.510014 | 1.2:+81698863 | MS.gene065159:intron |
| GATTGTTGGCATTCTTGTCA+GGG | 0.511190 | 1.2:-81697836 | None:intergenic |
| ACGGCAAATATATGTGTGCC+AGG | 0.520233 | 1.2:-81700669 | None:intergenic |
| GAAGTTTCGGAACTAAAGCC+TGG | 0.523940 | 1.2:+81700651 | MS.gene065159:CDS |
| AGAAGGCAGTACGACAGTGC+AGG | 0.538322 | 1.2:+81697924 | MS.gene065159:CDS |
| ATGAGCAGCAAGCTGAGTCC+GGG | 0.538924 | 1.2:+81699120 | MS.gene065159:CDS |
| ACAGTCAGACCCCTTCCAAT+GGG | 0.539807 | 1.2:+81698947 | MS.gene065159:CDS |
| TATTTCGAACAAGATGCAAA+CGG | 0.540322 | 1.2:+81699267 | MS.gene065159:CDS |
| GGCACTTGATGCTGATAGCA+TGG | 0.541278 | 1.2:+81698710 | MS.gene065159:intron |
| TGACAGATGTTCCCATTGGA+AGG | 0.542282 | 1.2:-81698958 | None:intergenic |
| CCAACCAGTACTAGTGGAAG+TGG | 0.543516 | 1.2:+81701741 | MS.gene065159:CDS |
| CCACTTCCACTAGTACTGGT+TGG | 0.543648 | 1.2:-81701741 | None:intergenic |
| TCATAACCATTCAAATTGAA+GGG | 0.544299 | 1.2:-81697527 | None:intergenic |
| CCACTGACAGATGTTCCCAT+TGG | 0.546382 | 1.2:-81698962 | None:intergenic |
| TACAGTCAGACCCCTTCCAA+TGG | 0.549746 | 1.2:+81698946 | MS.gene065159:CDS |
| GAGAGCCCTGGGGAAGATGG+AGG | 0.552103 | 1.2:+81701819 | MS.gene065159:CDS |
| TAAGAAAGAGGAATGAGCTA+CGG | 0.559189 | 1.2:+81700894 | MS.gene065159:CDS |
| ATTCGAATCAGAATATAGAA+AGG | 0.559792 | 1.2:+81700919 | MS.gene065159:CDS |
| AGTGGCAGTAATTTAAGCAA+TGG | 0.561362 | 1.2:+81701759 | MS.gene065159:CDS |
| GTTGCGGGCTGTTTGGAAAG+TGG | 0.564367 | 1.2:+81700542 | MS.gene065159:CDS |
| AGAGCCCTGGGGAAGATGGA+GGG | 0.564660 | 1.2:+81701820 | MS.gene065159:CDS |
| AGCTTCAGAACTATTCAAAG+AGG | 0.565165 | 1.2:+81697863 | MS.gene065159:CDS |
| TAGATGAGCTTCTGAAGCAA+AGG | 0.568314 | 1.2:+81701685 | MS.gene065159:CDS |
| GACAGATGTTCCCATTGGAA+GGG | 0.577219 | 1.2:-81698957 | None:intergenic |
| AGATGAGCTTCTGAAGCAAA+GGG | 0.578480 | 1.2:+81701686 | MS.gene065159:CDS |
| ACAGATGTTCCCATTGGAAG+GGG | 0.585092 | 1.2:-81698956 | None:intergenic |
| ATTCAACTGTGAATGCGGTA+TGG | 0.586790 | 1.2:+81700490 | MS.gene065159:CDS |
| GTCAAGCCAACCAGTACTAG+TGG | 0.588616 | 1.2:+81701735 | MS.gene065159:CDS |
| CAGGAAGATAGTGAGAAGAC+TGG | 0.589084 | 1.2:+81700414 | MS.gene065159:intron |
| GCTTTCTTTAAAAGGTTGGA+AGG | 0.589624 | 1.2:+81700615 | MS.gene065159:CDS |
| AGTAACTCTTACTACAATCC+CGG | 0.591228 | 1.2:-81699138 | None:intergenic |
| GGGAACATCTGTCAGTGGAA+AGG | 0.595107 | 1.2:+81698967 | MS.gene065159:CDS |
| CTGACCCTCCATCTTCCCCA+GGG | 0.596536 | 1.2:-81701824 | None:intergenic |
| TATCTGACCCAGAAAAGAGA+AGG | 0.614795 | 1.2:+81697907 | MS.gene065159:CDS |
| TGTTGTGGTGCAGTTAGCGA+TGG | 0.622724 | 1.2:+81700575 | MS.gene065159:CDS |
| AGCGATGGCCAAGGATCCTG+AGG | 0.626922 | 1.2:+81700590 | MS.gene065159:CDS |
| GCGATGGCCAAGGATCCTGA+GGG | 0.627814 | 1.2:+81700591 | MS.gene065159:CDS |
| GGTGCAGTTAGCGATGGCCA+AGG | 0.631797 | 1.2:+81700581 | MS.gene065159:CDS |
| ATTTCTGGTGAAGATTCCAA+AGG | 0.636229 | 1.2:+81701795 | MS.gene065159:CDS |
| AATGGATTCAACTGTGAATG+CGG | 0.640290 | 1.2:+81700485 | MS.gene065159:CDS |
| TGATGCTGATAGCATGGACA+TGG | 0.647234 | 1.2:+81698716 | MS.gene065159:CDS |
| TTTAGTTCCGAAACTTCACA+AGG | 0.659450 | 1.2:-81700645 | None:intergenic |
| TTTCGAACAAGATGCAAACG+GGG | 0.666223 | 1.2:+81699269 | MS.gene065159:CDS |
| GATGGCCAAGGATCCTGAGG+GGG | 0.667249 | 1.2:+81700593 | MS.gene065159:CDS |
| GAGCTTCTGAAGCAAAGGGA+CGG | 0.671749 | 1.2:+81701690 | MS.gene065159:CDS |
| CCAATGGGAACATCTGTCAG+TGG | 0.675083 | 1.2:+81698962 | MS.gene065159:CDS |
| AGTACTGGTTGGCTTGACAA+TGG | 0.678755 | 1.2:-81701730 | None:intergenic |
| GGTTGGCTTGACAATGGTGA+AGG | 0.708781 | 1.2:-81701724 | None:intergenic |
| TTCGAACAAGATGCAAACGG+GGG | 0.711604 | 1.2:+81699270 | MS.gene065159:CDS |
| CGATGGCCAAGGATCCTGAG+GGG | 0.716333 | 1.2:+81700592 | MS.gene065159:CDS |
| TTCCAAAGGTGAGAGCCCTG+GGG | 0.764572 | 1.2:+81701809 | MS.gene065159:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAGTTACATATTAATTAAA+AGG | - | chr1.2:81698666-81698685 | None:intergenic | 10.0% |
| !!! | AATTTAATACCAATATATTT+TGG | - | chr1.2:81699651-81699670 | None:intergenic | 10.0% |
| !!! | TATTATATTTTAGTCAAAAT+TGG | + | chr1.2:81698308-81698327 | MS.gene065159:intron | 10.0% |
| !! | AATGAGATAATATATTGTTA+AGG | + | chr1.2:81699461-81699480 | MS.gene065159:intron | 15.0% |
| !! | ATGAGATAATATATTGTTAA+GGG | + | chr1.2:81699462-81699481 | MS.gene065159:intron | 15.0% |
| !!! | AATTTGAGATATAAGTTAAT+GGG | - | chr1.2:81699940-81699959 | None:intergenic | 15.0% |
| !!! | ATAGTTTGCTTTTTATATAT+CGG | + | chr1.2:81698531-81698550 | MS.gene065159:intron | 15.0% |
| !!! | TGGTTTGTTTTTTTATATAT+CGG | + | chr1.2:81698579-81698598 | MS.gene065159:intron | 15.0% |
| !!! | TTAATAGTCATTTCAATTTT+TGG | - | chr1.2:81699850-81699869 | None:intergenic | 15.0% |
| !! | AAAAACAGTACATATGTATA+AGG | - | chr1.2:81698381-81698400 | None:intergenic | 20.0% |
| !! | AAATACTATAGATTAGTGTT+TGG | + | chr1.2:81697585-81697604 | MS.gene065159:intron | 20.0% |
| !! | AATACTATAGATTAGTGTTT+GGG | + | chr1.2:81697586-81697605 | MS.gene065159:intron | 20.0% |
| !! | ATAAATTGTTTAAACTCTGT+AGG | + | chr1.2:81697693-81697712 | MS.gene065159:intron | 20.0% |
| !! | ATAGTAATCTATGAAAAGAT+AGG | - | chr1.2:81698414-81698433 | None:intergenic | 20.0% |
| !! | CAATTATCAGAATTTAATAG+AGG | + | chr1.2:81701310-81701329 | MS.gene065159:intron | 20.0% |
| !! | CTAAAATATAATATTTGACG+TGG | - | chr1.2:81698301-81698320 | None:intergenic | 20.0% |
| !! | GACTATTAACTTTATATTAC+TGG | + | chr1.2:81699861-81699880 | MS.gene065159:intron | 20.0% |
| !! | TAAATTATTCAGACCATAAA+CGG | - | chr1.2:81700691-81700710 | None:intergenic | 20.0% |
| !! | TCAAAAGTAACAAAGTTTAT+TGG | + | chr1.2:81699512-81699531 | MS.gene065159:intron | 20.0% |
| !!! | AAATCGATTTATCTAATCTT+GGG | + | chr1.2:81698739-81698758 | MS.gene065159:CDS | 20.0% |
| !!! | ATCTATGAATCAATTTTGAA+TGG | - | chr1.2:81700309-81700328 | None:intergenic | 20.0% |
| !!! | GAATTTGAGATATAAGTTAA+TGG | - | chr1.2:81699941-81699960 | None:intergenic | 20.0% |
| !!! | GTTGATTTACCAAAATATAT+TGG | + | chr1.2:81699639-81699658 | MS.gene065159:intron | 20.0% |
| !!! | TAATTTGTCTGTTATTTTTC+TGG | + | chr1.2:81701653-81701672 | MS.gene065159:intron | 20.0% |
| !!! | TATAATTTTTTCCCTTTTCT+GGG | + | chr1.2:81698123-81698142 | MS.gene065159:intron | 20.0% |
| ! | AAAACATGAGTCATTTGTTT+CGG | + | chr1.2:81698349-81698368 | MS.gene065159:intron | 25.0% |
| ! | AACTTTGACAACAACAAATA+AGG | - | chr1.2:81699371-81699390 | None:intergenic | 25.0% |
| ! | ACTTTGACAACAACAAATAA+GGG | - | chr1.2:81699370-81699389 | None:intergenic | 25.0% |
| ! | ATAAATCAGGCAAAAAGAAA+TGG | + | chr1.2:81701856-81701875 | MS.gene065159:CDS | 25.0% |
| ! | ATCTCTGCAATAAATACTTA+AGG | - | chr1.2:81699429-81699448 | None:intergenic | 25.0% |
| ! | ATTCGAATCAGAATATAGAA+AGG | + | chr1.2:81700919-81700938 | MS.gene065159:CDS | 25.0% |
| ! | CATAAAACAGACAACTAAAA+AGG | + | chr1.2:81699558-81699577 | MS.gene065159:intron | 25.0% |
| ! | GCATAATATTAGTAAACACT+AGG | + | chr1.2:81700010-81700029 | MS.gene065159:intron | 25.0% |
| ! | GTATGGATATTATGTCTATT+TGG | + | chr1.2:81700507-81700526 | MS.gene065159:CDS | 25.0% |
| ! | TCAGAATTTAATAGAGGAAA+AGG | + | chr1.2:81701316-81701335 | MS.gene065159:intron | 25.0% |
| ! | TCATAACCATTCAAATTGAA+GGG | - | chr1.2:81697530-81697549 | None:intergenic | 25.0% |
| ! | TCTCTGCAATAAATACTTAA+GGG | - | chr1.2:81699428-81699447 | None:intergenic | 25.0% |
| ! | TTGTTCTTATTCCACTTATA+TGG | + | chr1.2:81699044-81699063 | MS.gene065159:intron | 25.0% |
| ! | TTTATCCAGATGATAAAAAC+AGG | - | chr1.2:81700145-81700164 | None:intergenic | 25.0% |
| !! | GAAATCGATTTATCTAATCT+TGG | + | chr1.2:81698738-81698757 | MS.gene065159:CDS | 25.0% |
| !! | GCATTGTTTCTTACTTTATT+TGG | + | chr1.2:81698848-81698867 | MS.gene065159:intron | 25.0% |
| !!! | AAAACAAAAGTTTTGGCTAA+TGG | + | chr1.2:81698037-81698056 | MS.gene065159:intron | 25.0% |
| !!! | AAGTTTGAAGGAATTGATTT+TGG | - | chr1.2:81700170-81700189 | None:intergenic | 25.0% |
| !!! | AATTCGAGTTGATATTGTTT+AGG | + | chr1.2:81700770-81700789 | MS.gene065159:intron | 25.0% |
| !!! | ACAAAGTTTATTGGTTTTCT+TGG | + | chr1.2:81699521-81699540 | MS.gene065159:intron | 25.0% |
| !!! | ATAATTTTTTCCCTTTTCTG+GGG | + | chr1.2:81698124-81698143 | MS.gene065159:intron | 25.0% |
| !!! | CTATAATTTTTTCCCTTTTC+TGG | + | chr1.2:81698122-81698141 | MS.gene065159:intron | 25.0% |
| !!! | GTTTTTTTTTTTGCTTGCTT+GGG | + | chr1.2:81700723-81700742 | MS.gene065159:intron | 25.0% |
| !!! | TGTTTTTTTTTTTGCTTGCT+TGG | + | chr1.2:81700722-81700741 | MS.gene065159:intron | 25.0% |
| AAATGCATGAATTGAACGAA+AGG | - | chr1.2:81698437-81698456 | None:intergenic | 30.0% | |
| AACAGACAACTAAAAAGGAA+TGG | + | chr1.2:81699563-81699582 | MS.gene065159:intron | 30.0% | |
| AAGCAATGCAATAATCTTCT+TGG | + | chr1.2:81699014-81699033 | MS.gene065159:intron | 30.0% | |
| AGTAGTTGTGCAATTACAAT+TGG | + | chr1.2:81700358-81700377 | MS.gene065159:intron | 30.0% | |
| ATAGAAGTAAGATGTCAAGA+TGG | - | chr1.2:81698156-81698175 | None:intergenic | 30.0% | |
| ATTAAAAGGAGAGTTGTATC+AGG | - | chr1.2:81698652-81698671 | None:intergenic | 30.0% | |
| ATTAAATGTGTTCTGCTCTT+CGG | + | chr1.2:81701600-81701619 | MS.gene065159:intron | 30.0% | |
| ATTTACCAAGTTATCTAGCT+TGG | + | chr1.2:81698069-81698088 | MS.gene065159:intron | 30.0% | |
| CACAAGATTTGAAAGTTTGA+AGG | - | chr1.2:81700182-81700201 | None:intergenic | 30.0% | |
| CTGATCTCTATATAATTGAC+AGG | + | chr1.2:81697808-81697827 | MS.gene065159:intron | 30.0% | |
| GATATCACAGAAACTCTAAT+AGG | + | chr1.2:81699747-81699766 | MS.gene065159:intron | 30.0% | |
| GCATATAAAAGACCAAAACA+AGG | - | chr1.2:81701376-81701395 | None:intergenic | 30.0% | |
| GTCATAACCATTCAAATTGA+AGG | - | chr1.2:81697531-81697550 | None:intergenic | 30.0% | |
| TAATCTATGAAAAGATAGGC+AGG | - | chr1.2:81698410-81698429 | None:intergenic | 30.0% | |
| TATTTCGAACAAGATGCAAA+CGG | + | chr1.2:81699267-81699286 | MS.gene065159:CDS | 30.0% | |
| TCAGATAGTAAGGATAAATC+AGG | + | chr1.2:81701843-81701862 | MS.gene065159:CDS | 30.0% | |
| TGAATGATGATTAATCTCAC+AGG | + | chr1.2:81699799-81699818 | MS.gene065159:intron | 30.0% | |
| TGATAAAAACAGGAAACACA+AGG | - | chr1.2:81700135-81700154 | None:intergenic | 30.0% | |
| TTCAGAAAAGGATCACATTA+AGG | - | chr1.2:81700991-81701010 | None:intergenic | 30.0% | |
| TTGACATCTTACTTCTATGA+TGG | + | chr1.2:81698158-81698177 | MS.gene065159:intron | 30.0% | |
| TTGCAATAGCAACATACTAT+CGG | - | chr1.2:81701289-81701308 | None:intergenic | 30.0% | |
| TTTATAACTGTAGCATGTGT+TGG | - | chr1.2:81701088-81701107 | None:intergenic | 30.0% | |
| ! | AATGGTTATGACTTTTGCTT+GGG | + | chr1.2:81697539-81697558 | MS.gene065159:CDS | 30.0% |
| ! | ACACATATATTTGCCGTTTA+TGG | + | chr1.2:81700675-81700694 | MS.gene065159:CDS | 30.0% |
| ! | ATCTCACTATAGCTTTTCTA+GGG | + | chr1.2:81697749-81697768 | MS.gene065159:intron | 30.0% |
| ! | CAGCATGAAAACAAAAGTTT+TGG | + | chr1.2:81698030-81698049 | MS.gene065159:intron | 30.0% |
| ! | CTATTTTGCCTATGTATATC+AGG | + | chr1.2:81698689-81698708 | MS.gene065159:intron | 30.0% |
| ! | CTCAATATCCTGAAGTTTTT+GGG | - | chr1.2:81700864-81700883 | None:intergenic | 30.0% |
| ! | GTGAAACACATTTTATCATC+TGG | + | chr1.2:81700199-81700218 | MS.gene065159:intron | 30.0% |
| ! | TATCTCACTATAGCTTTTCT+AGG | + | chr1.2:81697748-81697767 | MS.gene065159:intron | 30.0% |
| ! | TTGGTTTCTTTTCTTTGTTG+CGG | + | chr1.2:81700526-81700545 | MS.gene065159:CDS | 30.0% |
| !! | AGGCTCAAATTTTAAGAAAG+AGG | + | chr1.2:81700882-81700901 | MS.gene065159:CDS | 30.0% |
| !! | CGTTTTGATATAATTTACCC+TGG | + | chr1.2:81701570-81701589 | MS.gene065159:intron | 30.0% |
| !! | GTCATTTCAATTTTTGGAAG+AGG | - | chr1.2:81699844-81699863 | None:intergenic | 30.0% |
| !! | TACAAAAGCACCACTTAAAA+AGG | - | chr1.2:81699336-81699355 | None:intergenic | 30.0% |
| !!! | AAGCAATGTGCTCATTTTTT+TGG | + | chr1.2:81699086-81699105 | MS.gene065159:CDS | 30.0% |
| !!! | ACATTTTCAAGTGTACAGAA+TGG | + | chr1.2:81700467-81700486 | MS.gene065159:CDS | 30.0% |
| !!! | ATAGCTTGAAGTTTGTTTTG+TGG | + | chr1.2:81700964-81700983 | MS.gene065159:intron | 30.0% |
| !!! | TGCCTTTTTTACAATGATTC+CGG | + | chr1.2:81699195-81699214 | MS.gene065159:intron | 30.0% |
| !!! | TGTTTCCTGTTTTTATCATC+TGG | + | chr1.2:81700137-81700156 | MS.gene065159:intron | 30.0% |
| AAACAGGACATATCGAAAAC+AGG | - | chr1.2:81701463-81701482 | None:intergenic | 35.0% | |
| AAAGCATAAGAAAAGCTTGC+AGG | - | chr1.2:81698196-81698215 | None:intergenic | 35.0% | |
| AACTAGCTATGACTAATCAG+AGG | - | chr1.2:81697653-81697672 | None:intergenic | 35.0% | |
| AACTGCACAAAGCAAATTCA+AGG | + | chr1.2:81699163-81699182 | MS.gene065159:CDS | 35.0% | |
| ACACATTTAATAGTAGTGCC+AGG | - | chr1.2:81701591-81701610 | None:intergenic | 35.0% | |
| ACATATACATCTCAGAAGAG+AGG | + | chr1.2:81698218-81698237 | MS.gene065159:intron | 35.0% | |
| ACCACTTAAAAAGGAACGTA+GGG | - | chr1.2:81699327-81699346 | None:intergenic | 35.0% | |
| ACTAGCTATGACTAATCAGA+GGG | - | chr1.2:81697652-81697671 | None:intergenic | 35.0% | |
| AGAAAGCCCTTCAATTTGAA+TGG | + | chr1.2:81697521-81697540 | MS.gene065159:CDS | 35.0% | |
| AGACAACTAAAAAGGAATGG+AGG | + | chr1.2:81699566-81699585 | MS.gene065159:intron | 35.0% | |
| AGACACAAGTAAAAGGGAAA+TGG | - | chr1.2:81699986-81700005 | None:intergenic | 35.0% | |
| AGCCGGAATCATTGTAAAAA+AGG | - | chr1.2:81699200-81699219 | None:intergenic | 35.0% | |
| AGCTTCAGAACTATTCAAAG+AGG | + | chr1.2:81697863-81697882 | MS.gene065159:CDS | 35.0% | |
| AGTAACTCTTACTACAATCC+CGG | - | chr1.2:81699141-81699160 | None:intergenic | 35.0% | |
| AGTGGCAGTAATTTAAGCAA+TGG | + | chr1.2:81701759-81701778 | MS.gene065159:CDS | 35.0% | |
| ATCAAGTGCCTGATATACAT+AGG | - | chr1.2:81698700-81698719 | None:intergenic | 35.0% | |
| ATCGAAGAAAAGAAGAGCTT+TGG | - | chr1.2:81697988-81698007 | None:intergenic | 35.0% | |
| ATGGTTCAACCTCAATCTTA+AGG | + | chr1.2:81701875-81701894 | MS.gene065159:CDS | 35.0% | |
| ATTTCGAACAAGATGCAAAC+GGG | + | chr1.2:81699268-81699287 | MS.gene065159:CDS | 35.0% | |
| CACATTTAATAGTAGTGCCA+GGG | - | chr1.2:81701590-81701609 | None:intergenic | 35.0% | |
| CAGATTGTAATATTGAACGC+TGG | + | chr1.2:81699230-81699249 | MS.gene065159:intron | 35.0% | |
| CATAACAGCACGAATTTCTA+TGG | + | chr1.2:81700088-81700107 | MS.gene065159:intron | 35.0% | |
| CCAAAAACTTCAGGATATTG+AGG | + | chr1.2:81700862-81700881 | MS.gene065159:CDS | 35.0% | |
| GAAAAGCTATAGTGAGATAG+CGG | - | chr1.2:81697747-81697766 | None:intergenic | 35.0% | |
| GACAACTAAAAAGGAATGGA+GGG | + | chr1.2:81699567-81699586 | MS.gene065159:intron | 35.0% | |
| GAGATCAGTGTTATCAATTG+TGG | - | chr1.2:81697796-81697815 | None:intergenic | 35.0% | |
| GCAACAAATTGCCATATAAG+TGG | - | chr1.2:81699058-81699077 | None:intergenic | 35.0% | |
| GCTACAAGACACAAGTAAAA+GGG | - | chr1.2:81699992-81700011 | None:intergenic | 35.0% | |
| GCTGCTTGCATTAATGTAAA+TGG | + | chr1.2:81698512-81698531 | MS.gene065159:intron | 35.0% | |
| GTCTATGCAATTGTCTATAC+AGG | + | chr1.2:81700395-81700414 | MS.gene065159:intron | 35.0% | |
| TAAAAATACAACCACGTGCA+AGG | - | chr1.2:81700050-81700069 | None:intergenic | 35.0% | |
| TAAAAGGGAAATGGAGATGA+GGG | - | chr1.2:81699977-81699996 | None:intergenic | 35.0% | |
| TAAATAACAATCCTTGCACG+TGG | + | chr1.2:81700036-81700055 | MS.gene065159:intron | 35.0% | |
| TAAGAAAGAGGAATGAGCTA+CGG | + | chr1.2:81700894-81700913 | MS.gene065159:CDS | 35.0% | |
| TACAATGATTCCGGCTAATA+TGG | + | chr1.2:81699204-81699223 | MS.gene065159:intron | 35.0% | |
| TCTTCAACCTTGTGAAGTTT+CGG | + | chr1.2:81700638-81700657 | MS.gene065159:CDS | 35.0% | |
| TGCTACAAGACACAAGTAAA+AGG | - | chr1.2:81699993-81700012 | None:intergenic | 35.0% | |
| TGGTAAATCAACAAGTCGAA+GGG | - | chr1.2:81699631-81699650 | None:intergenic | 35.0% | |
| TGGTTCAACCTCAATCTTAA+GGG | + | chr1.2:81701876-81701895 | MS.gene065159:CDS | 35.0% | |
| TTCAAGAACATTAGCCGAAA+TGG | - | chr1.2:81698906-81698925 | None:intergenic | 35.0% | |
| TTGGTAAATCAACAAGTCGA+AGG | - | chr1.2:81699632-81699651 | None:intergenic | 35.0% | |
| TTTGGAAGAGGTAAAACCAT+GGG | - | chr1.2:81699832-81699851 | None:intergenic | 35.0% | |
| ! | AAACAAGGATAAGCATCGTA+TGG | - | chr1.2:81701361-81701380 | None:intergenic | 35.0% |
| ! | AATGGATTCAACTGTGAATG+CGG | + | chr1.2:81700485-81700504 | MS.gene065159:CDS | 35.0% |
| ! | ATGGTTATGACTTTTGCTTG+GGG | + | chr1.2:81697540-81697559 | MS.gene065159:CDS | 35.0% |
| ! | CCTCAATATCCTGAAGTTTT+TGG | - | chr1.2:81700865-81700884 | None:intergenic | 35.0% |
| ! | GAATGGTTATGACTTTTGCT+TGG | + | chr1.2:81697538-81697557 | MS.gene065159:CDS | 35.0% |
| ! | GCTTTCTTTAAAAGGTTGGA+AGG | + | chr1.2:81700615-81700634 | MS.gene065159:CDS | 35.0% |
| ! | GGAAGTTCTAGCAAAATTTC+TGG | + | chr1.2:81701780-81701799 | MS.gene065159:CDS | 35.0% |
| ! | GTTTTCCAAGCTAGATAACT+TGG | - | chr1.2:81698077-81698096 | None:intergenic | 35.0% |
| ! | TCCTTTTCTGAATACGTTTC+AGG | + | chr1.2:81700999-81701018 | MS.gene065159:intron | 35.0% |
| ! | TGGTTTCTTTTCTTTGTTGC+GGG | + | chr1.2:81700527-81700546 | MS.gene065159:CDS | 35.0% |
| ! | TGTTTTCATGCTGCCAAAAA+GGG | - | chr1.2:81698023-81698042 | None:intergenic | 35.0% |
| ! | TTATTTGGTAACAGCAAGCT+GGG | + | chr1.2:81698863-81698882 | MS.gene065159:intron | 35.0% |
| ! | TTGTTTTCATGCTGCCAAAA+AGG | - | chr1.2:81698024-81698043 | None:intergenic | 35.0% |
| ! | TTTAGTTCCGAAACTTCACA+AGG | - | chr1.2:81700648-81700667 | None:intergenic | 35.0% |
| ! | TTTATTTGGTAACAGCAAGC+TGG | + | chr1.2:81698862-81698881 | MS.gene065159:intron | 35.0% |
| !! | AATATCCTGAAGTTTTTGGG+TGG | - | chr1.2:81700861-81700880 | None:intergenic | 35.0% |
| !! | ATTTCTGGTGAAGATTCCAA+AGG | + | chr1.2:81701795-81701814 | MS.gene065159:CDS | 35.0% |
| !! | CAATGTTTGCAGCTTTATTC+AGG | + | chr1.2:81698772-81698791 | MS.gene065159:CDS | 35.0% |
| !! | CTTATATGGCAATTTGTTGC+AGG | + | chr1.2:81699058-81699077 | MS.gene065159:intron | 35.0% |
| !! | GTTCTTGAAGAAGCTTTGAA+TGG | + | chr1.2:81698917-81698936 | MS.gene065159:CDS | 35.0% |
| !! | TACGATGCTTATCCTTGTTT+TGG | + | chr1.2:81701361-81701380 | MS.gene065159:intron | 35.0% |
| !! | TTGAATAGTTCTGAAGCTTC+AGG | - | chr1.2:81697861-81697880 | None:intergenic | 35.0% |
| !! | TTTTGGAAGAGGTAAAACCA+TGG | - | chr1.2:81699833-81699852 | None:intergenic | 35.0% |
| !!! | AAAGTTTTGGCTAATGGCAT+AGG | + | chr1.2:81698043-81698062 | MS.gene065159:intron | 35.0% |
| !!! | TGTTATTTTTCTGGTTACCC+AGG | + | chr1.2:81701662-81701681 | MS.gene065159:intron | 35.0% |
| AACAGCACGAATTTCTATGG+TGG | + | chr1.2:81700091-81700110 | MS.gene065159:intron | 40.0% | |
| ACAACTTAATGGAGCAGATG+GGG | - | chr1.2:81701217-81701236 | None:intergenic | 40.0% | |
| ACAGTGAGAATCTGCAGAAA+TGG | - | chr1.2:81701489-81701508 | None:intergenic | 40.0% | |
| AGATACCACCCAAAAACTTC+AGG | + | chr1.2:81700853-81700872 | MS.gene065159:CDS | 40.0% | |
| ATTCAACTGTGAATGCGGTA+TGG | + | chr1.2:81700490-81700509 | MS.gene065159:CDS | 40.0% | |
| CAATCTGATGCCATATTAGC+CGG | - | chr1.2:81699217-81699236 | None:intergenic | 40.0% | |
| CACAACTTAATGGAGCAGAT+GGG | - | chr1.2:81701218-81701237 | None:intergenic | 40.0% | |
| CACCACTTAAAAAGGAACGT+AGG | - | chr1.2:81699328-81699347 | None:intergenic | 40.0% | |
| CACTCAAATTCCAAGTTGCA+GGG | - | chr1.2:81698266-81698285 | None:intergenic | 40.0% | |
| CCCAATCAAGACTACCATTT+CGG | + | chr1.2:81698889-81698908 | MS.gene065159:CDS | 40.0% | |
| GATTGTTGGCATTCTTGTCA+GGG | - | chr1.2:81697839-81697858 | None:intergenic | 40.0% | |
| GCCTGAAACGTATTCAGAAA+AGG | - | chr1.2:81701003-81701022 | None:intergenic | 40.0% | |
| GTAAAAGGGAAATGGAGATG+AGG | - | chr1.2:81699978-81699997 | None:intergenic | 40.0% | |
| TATCTGACCCAGAAAAGAGA+AGG | + | chr1.2:81697907-81697926 | MS.gene065159:CDS | 40.0% | |
| TCACTCAAATTCCAAGTTGC+AGG | - | chr1.2:81698267-81698286 | None:intergenic | 40.0% | |
| TCTGAATACGTTTCAGGCAT+TGG | + | chr1.2:81701005-81701024 | MS.gene065159:intron | 40.0% | |
| TCTGCAGAAATGGTGAAAAC+AGG | - | chr1.2:81701479-81701498 | None:intergenic | 40.0% | |
| TGACAATGGTGAAGGTAGAA+TGG | - | chr1.2:81701719-81701738 | None:intergenic | 40.0% | |
| TGGATTCACATGGAAAGAAG+AGG | - | chr1.2:81697968-81697987 | None:intergenic | 40.0% | |
| TTACAACCTCAACCTACTCA+TGG | - | chr1.2:81699690-81699709 | None:intergenic | 40.0% | |
| TTGATACACTCACCATGAGT+AGG | + | chr1.2:81699675-81699694 | MS.gene065159:intron | 40.0% | |
| TTTCGAACAAGATGCAAACG+GGG | + | chr1.2:81699269-81699288 | MS.gene065159:CDS | 40.0% | |
| ! | AGTTGCAGATTTTTCTCACC+TGG | + | chr1.2:81701250-81701269 | MS.gene065159:intron | 40.0% |
| ! | CCGAAATGGTAGTCTTGATT+GGG | - | chr1.2:81698892-81698911 | None:intergenic | 40.0% |
| ! | TCTAGCTTGCCACAACTTAA+TGG | - | chr1.2:81701228-81701247 | None:intergenic | 40.0% |
| ! | TTTATCTCTCCCTCCCTTTT+TGG | + | chr1.2:81698007-81698026 | MS.gene065159:intron | 40.0% |
| ! | TTTTTCTCACCTGGCTTACT+TGG | + | chr1.2:81701259-81701278 | MS.gene065159:intron | 40.0% |
| !! | AGAAGAGCTTTGGATTCACA+TGG | - | chr1.2:81697978-81697997 | None:intergenic | 40.0% |
| !! | AGATGAGCTTCTGAAGCAAA+GGG | + | chr1.2:81701686-81701705 | MS.gene065159:CDS | 40.0% |
| !! | CTATAGTGAGATAGCGGATA+GGG | - | chr1.2:81697741-81697760 | None:intergenic | 40.0% |
| !! | GGAGTAAAAGAAGAAGCACT+AGG | - | chr1.2:81699601-81699620 | None:intergenic | 40.0% |
| !! | TAGATGAGCTTCTGAAGCAA+AGG | + | chr1.2:81701685-81701704 | MS.gene065159:CDS | 40.0% |
| !! | TATAGTGAGATAGCGGATAG+GGG | - | chr1.2:81697740-81697759 | None:intergenic | 40.0% |
| !! | TCCCTACGTTCCTTTTTAAG+TGG | + | chr1.2:81699323-81699342 | MS.gene065159:intron | 40.0% |
| !! | TTCTGAAGCTTCAGGATTGT+TGG | - | chr1.2:81697853-81697872 | None:intergenic | 40.0% |
| !! | TTGCAGCTTTATTCAGGTGT+GGG | + | chr1.2:81698778-81698797 | MS.gene065159:intron | 40.0% |
| !! | TTTGCAGCTTTATTCAGGTG+TGG | + | chr1.2:81698777-81698796 | MS.gene065159:intron | 40.0% |
| !!! | AGTGGTCACTTTTAGTGTTG+TGG | + | chr1.2:81700560-81700579 | MS.gene065159:CDS | 40.0% |
| AACAAGTCGAAGGGAGATGA+GGG | - | chr1.2:81699622-81699641 | None:intergenic | 45.0% | |
| AACAGGAAACACAAGGCCAA+AGG | - | chr1.2:81700128-81700147 | None:intergenic | 45.0% | |
| AACCTCAATCTTAAGGGCTC+GGG | + | chr1.2:81701882-81701901 | MS.gene065159:CDS | 45.0% | |
| ACAGATGTTCCCATTGGAAG+GGG | - | chr1.2:81698959-81698978 | None:intergenic | 45.0% | |
| ACGGCAAATATATGTGTGCC+AGG | - | chr1.2:81700672-81700691 | None:intergenic | 45.0% | |
| ACTGATGATCAGCTATGCTG+TGG | - | chr1.2:81701186-81701205 | None:intergenic | 45.0% | |
| AGAGGGTGAAAACTGATAGC+AGG | - | chr1.2:81697635-81697654 | None:intergenic | 45.0% | |
| AGATGGAGGGTCAGATAGTA+AGG | + | chr1.2:81701833-81701852 | MS.gene065159:CDS | 45.0% | |
| CAACCTCAATCTTAAGGGCT+CGG | + | chr1.2:81701881-81701900 | MS.gene065159:CDS | 45.0% | |
| CAGGAAGATAGTGAGAAGAC+TGG | + | chr1.2:81700414-81700433 | MS.gene065159:intron | 45.0% | |
| CCACAACTTAATGGAGCAGA+TGG | - | chr1.2:81701219-81701238 | None:intergenic | 45.0% | |
| CTGAGGGGGCTTTCTTTAAA+AGG | + | chr1.2:81700607-81700626 | MS.gene065159:CDS | 45.0% | |
| CTGATGATCAGCTATGCTGT+GGG | - | chr1.2:81701185-81701204 | None:intergenic | 45.0% | |
| CTTCAGAAGCTCATCTACCT+GGG | - | chr1.2:81701682-81701701 | None:intergenic | 45.0% | |
| GAAACGCAAAAGAGCTTTCG+AGG | - | chr1.2:81698619-81698638 | None:intergenic | 45.0% | |
| GAAGTTTCGGAACTAAAGCC+TGG | + | chr1.2:81700651-81700670 | MS.gene065159:CDS | 45.0% | |
| GACAGATGTTCCCATTGGAA+GGG | - | chr1.2:81698960-81698979 | None:intergenic | 45.0% | |
| GGATTGTTGGCATTCTTGTC+AGG | - | chr1.2:81697840-81697859 | None:intergenic | 45.0% | |
| TCAAATTCCAAGTTGCAGGG+AGG | - | chr1.2:81698263-81698282 | None:intergenic | 45.0% | |
| TGACAGATGTTCCCATTGGA+AGG | - | chr1.2:81698961-81698980 | None:intergenic | 45.0% | |
| TGATGATCAGCTATGCTGTG+GGG | - | chr1.2:81701184-81701203 | None:intergenic | 45.0% | |
| TGATGCTGATAGCATGGACA+TGG | + | chr1.2:81698716-81698735 | MS.gene065159:CDS | 45.0% | |
| TTCATGCTGCCAAAAAGGGA+GGG | - | chr1.2:81698019-81698038 | None:intergenic | 45.0% | |
| TTCGAACAAGATGCAAACGG+GGG | + | chr1.2:81699270-81699289 | MS.gene065159:CDS | 45.0% | |
| TTTCATGCTGCCAAAAAGGG+AGG | - | chr1.2:81698020-81698039 | None:intergenic | 45.0% | |
| ! | ACTGGCGTTTTCTTCAAGCA+TGG | + | chr1.2:81699879-81699898 | MS.gene065159:intron | 45.0% |
| ! | ATTCAACTGCAGAAGCGTGA+AGG | - | chr1.2:81699784-81699803 | None:intergenic | 45.0% |
| ! | CCATCTGCTCCATTAAGTTG+TGG | + | chr1.2:81701216-81701235 | MS.gene065159:intron | 45.0% |
| ! | CGTACTGCCTTCTCTTTTCT+GGG | - | chr1.2:81697917-81697936 | None:intergenic | 45.0% |
| ! | GCCGAAATGGTAGTCTTGAT+TGG | - | chr1.2:81698893-81698912 | None:intergenic | 45.0% |
| ! | GGGGGCTTTCTTTAAAAGGT+TGG | + | chr1.2:81700611-81700630 | MS.gene065159:CDS | 45.0% |
| ! | TCGTACTGCCTTCTCTTTTC+TGG | - | chr1.2:81697918-81697937 | None:intergenic | 45.0% |
| ! | TTTCTTTGTTGCGGGCTGTT+TGG | + | chr1.2:81700535-81700554 | MS.gene065159:CDS | 45.0% |
| !! | AGTACTGGTTGGCTTGACAA+TGG | - | chr1.2:81701733-81701752 | None:intergenic | 45.0% |
| !! | ATAGTGAGATAGCGGATAGG+GGG | - | chr1.2:81697739-81697758 | None:intergenic | 45.0% |
| !! | CTTTTAAAGAAAGCCCCCTC+AGG | - | chr1.2:81700609-81700628 | None:intergenic | 45.0% |
| !! | GCTATAGTGAGATAGCGGAT+AGG | - | chr1.2:81697742-81697761 | None:intergenic | 45.0% |
| !!! | CACTATAGCTTTTCTAGGGC+CGG | + | chr1.2:81697753-81697772 | MS.gene065159:intron | 45.0% |
| AACCCGAGCCCTTAAGATTG+AGG | - | chr1.2:81701887-81701906 | None:intergenic | 50.0% | |
| AAGGGAAATGGAGATGAGGG+TGG | - | chr1.2:81699974-81699993 | None:intergenic | 50.0% | |
| AATGAGCAGCAAGCTGAGTC+CGG | + | chr1.2:81699119-81699138 | MS.gene065159:CDS | 50.0% | |
| ACAGTCAGACCCCTTCCAAT+GGG | + | chr1.2:81698947-81698966 | MS.gene065159:CDS | 50.0% | |
| ACTGGCAAAGTGACATCTGC+TGG | + | chr1.2:81700432-81700451 | MS.gene065159:CDS | 50.0% | |
| ATGGCAAGCTCCCCAGAAAA+GGG | - | chr1.2:81698137-81698156 | None:intergenic | 50.0% | |
| ATTCCAAAGGTGAGAGCCCT+GGG | + | chr1.2:81701808-81701827 | MS.gene065159:CDS | 50.0% | |
| CAACAAGTCGAAGGGAGATG+AGG | - | chr1.2:81699623-81699642 | None:intergenic | 50.0% | |
| CACTCACCATGAGTAGGTTG+AGG | + | chr1.2:81699681-81699700 | MS.gene065159:intron | 50.0% | |
| CATATTGCCTCCCTGCAACT+TGG | + | chr1.2:81698253-81698272 | MS.gene065159:intron | 50.0% | |
| CCAACCAGTACTAGTGGAAG+TGG | + | chr1.2:81701741-81701760 | MS.gene065159:CDS | 50.0% | |
| CCAATGGGAACATCTGTCAG+TGG | + | chr1.2:81698962-81698981 | MS.gene065159:CDS | 50.0% | |
| CCACTGACAGATGTTCCCAT+TGG | - | chr1.2:81698965-81698984 | None:intergenic | 50.0% | |
| GAAATGGAGATGAGGGTGGA+GGG | - | chr1.2:81699970-81699989 | None:intergenic | 50.0% | |
| GCTTCAGAAGCTCATCTACC+TGG | - | chr1.2:81701683-81701702 | None:intergenic | 50.0% | |
| GGATAGCAGAGCATAGTGTC+CGG | - | chr1.2:81697775-81697794 | None:intergenic | 50.0% | |
| GGCACTTGATGCTGATAGCA+TGG | + | chr1.2:81698710-81698729 | MS.gene065159:intron | 50.0% | |
| GGGAACATCTGTCAGTGGAA+AGG | + | chr1.2:81698967-81698986 | MS.gene065159:CDS | 50.0% | |
| GGGCTATGGTTTAGCATTGC+AGG | + | chr1.2:81699290-81699309 | MS.gene065159:CDS | 50.0% | |
| GTACGACAGTGCAGGATTTG+AGG | + | chr1.2:81697932-81697951 | MS.gene065159:CDS | 50.0% | |
| GTCAAGCCAACCAGTACTAG+TGG | + | chr1.2:81701735-81701754 | MS.gene065159:CDS | 50.0% | |
| TACAGTCAGACCCCTTCCAA+TGG | + | chr1.2:81698946-81698965 | MS.gene065159:CDS | 50.0% | |
| TCTCACAGGCAGATATCCCA+TGG | + | chr1.2:81699813-81699832 | MS.gene065159:intron | 50.0% | |
| TGTTGTGGTGCAGTTAGCGA+TGG | + | chr1.2:81700575-81700594 | MS.gene065159:CDS | 50.0% | |
| ! | ACTGCCACTTCCACTAGTAC+TGG | - | chr1.2:81701748-81701767 | None:intergenic | 50.0% |
| !! | CCACTTCCACTAGTACTGGT+TGG | - | chr1.2:81701744-81701763 | None:intergenic | 50.0% |
| !! | GAGCTTCTGAAGCAAAGGGA+CGG | + | chr1.2:81701690-81701709 | MS.gene065159:CDS | 50.0% |
| !! | GGTTGGCTTGACAATGGTGA+AGG | - | chr1.2:81701727-81701746 | None:intergenic | 50.0% |
| AGAAGGCAGTACGACAGTGC+AGG | + | chr1.2:81697924-81697943 | MS.gene065159:CDS | 55.0% | |
| ATCGGCAAGCCAAGTAAGCC+AGG | - | chr1.2:81701271-81701290 | None:intergenic | 55.0% | |
| ATGAGCAGCAAGCTGAGTCC+GGG | + | chr1.2:81699120-81699139 | MS.gene065159:CDS | 55.0% | |
| CAAGATGCAAACGGGGGCTA+TGG | + | chr1.2:81699276-81699295 | MS.gene065159:CDS | 55.0% | |
| GATGGCAAGCTCCCCAGAAA+AGG | - | chr1.2:81698138-81698157 | None:intergenic | 55.0% | |
| GATTCCAAAGGTGAGAGCCC+TGG | + | chr1.2:81701807-81701826 | MS.gene065159:CDS | 55.0% | |
| GGAAATGGAGATGAGGGTGG+AGG | - | chr1.2:81699971-81699990 | None:intergenic | 55.0% | |
| GGTGGCTGCTAACAAGCCTT+TGG | + | chr1.2:81700109-81700128 | MS.gene065159:intron | 55.0% | |
| GTAAGCAGTCCCAACCACCT+GGG | + | chr1.2:81699706-81699725 | MS.gene065159:intron | 55.0% | |
| TAAGCAGTCCCAACCACCTG+GGG | + | chr1.2:81699707-81699726 | MS.gene065159:intron | 55.0% | |
| TGTAAGCAGTCCCAACCACC+TGG | + | chr1.2:81699705-81699724 | MS.gene065159:intron | 55.0% | |
| TTCCAAAGGTGAGAGCCCTG+GGG | + | chr1.2:81701809-81701828 | MS.gene065159:CDS | 55.0% | |
| ! | GTTGCGGGCTGTTTGGAAAG+TGG | + | chr1.2:81700542-81700561 | MS.gene065159:CDS | 55.0% |
| !! | TCAGGCATTGGCACGCTATC+AGG | + | chr1.2:81701017-81701036 | MS.gene065159:intron | 55.0% |
| !! | TGAGATAGCGGATAGGGGGA+TGG | - | chr1.2:81697735-81697754 | None:intergenic | 55.0% |
| AACCACCTGGGGCGAGAACA+TGG | + | chr1.2:81699718-81699737 | MS.gene065159:intron | 60.0% | |
| ACCACCTGGGGCGAGAACAT+GGG | + | chr1.2:81699719-81699738 | MS.gene065159:intron | 60.0% | |
| AGAGCCCTGGGGAAGATGGA+GGG | + | chr1.2:81701820-81701839 | MS.gene065159:CDS | 60.0% | |
| AGCGATGGCCAAGGATCCTG+AGG | + | chr1.2:81700590-81700609 | MS.gene065159:CDS | 60.0% | |
| ATGGAGATGAGGGTGGAGGG+AGG | - | chr1.2:81699967-81699986 | None:intergenic | 60.0% | |
| ATGTTCTCGCCCCAGGTGGT+TGG | - | chr1.2:81699719-81699738 | None:intergenic | 60.0% | |
| CGATGGCCAAGGATCCTGAG+GGG | + | chr1.2:81700592-81700611 | MS.gene065159:CDS | 60.0% | |
| CTGACCCTCCATCTTCCCCA+GGG | - | chr1.2:81701827-81701846 | None:intergenic | 60.0% | |
| GAAAGCCCCCTCAGGATCCT+TGG | - | chr1.2:81700601-81700620 | None:intergenic | 60.0% | |
| GATGGCCAAGGATCCTGAGG+GGG | + | chr1.2:81700593-81700612 | MS.gene065159:CDS | 60.0% | |
| GCGATGGCCAAGGATCCTGA+GGG | + | chr1.2:81700591-81700610 | MS.gene065159:CDS | 60.0% | |
| GGTGCAGTTAGCGATGGCCA+AGG | + | chr1.2:81700581-81700600 | MS.gene065159:CDS | 60.0% | |
| TCTGACCCTCCATCTTCCCC+AGG | - | chr1.2:81701828-81701847 | None:intergenic | 60.0% | |
| TGGAGATGAGGGTGGAGGGA+GGG | - | chr1.2:81699966-81699985 | None:intergenic | 60.0% | |
| TGTTCTCGCCCCAGGTGGTT+GGG | - | chr1.2:81699718-81699737 | None:intergenic | 60.0% | |
| TTCCCCAGGGCTCTCACCTT+TGG | - | chr1.2:81701814-81701833 | None:intergenic | 60.0% | |
| GAGAGCCCTGGGGAAGATGG+AGG | + | chr1.2:81701819-81701838 | MS.gene065159:CDS | 65.0% | |
| GAGTCCCATGTTCTCGCCCC+AGG | - | chr1.2:81699726-81699745 | None:intergenic | 65.0% | |
| GGTGAGAGCCCTGGGGAAGA+TGG | + | chr1.2:81701816-81701835 | MS.gene065159:CDS | 65.0% | |
| TCCCATGTTCTCGCCCCAGG+TGG | - | chr1.2:81699723-81699742 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 81697512 | 81701926 | 81697512 | ID=MS.gene065159 |
| chr1.2 | mRNA | 81697512 | 81701926 | 81697512 | ID=MS.gene065159.t1;Parent=MS.gene065159 |
| chr1.2 | exon | 81697512 | 81697561 | 81697512 | ID=MS.gene065159.t1.exon1;Parent=MS.gene065159.t1 |
| chr1.2 | CDS | 81697512 | 81697561 | 81697512 | ID=cds.MS.gene065159.t1;Parent=MS.gene065159.t1 |
| chr1.2 | exon | 81697830 | 81697953 | 81697830 | ID=MS.gene065159.t1.exon2;Parent=MS.gene065159.t1 |
| chr1.2 | CDS | 81697830 | 81697953 | 81697830 | ID=cds.MS.gene065159.t1;Parent=MS.gene065159.t1 |
| chr1.2 | exon | 81698711 | 81698793 | 81698711 | ID=MS.gene065159.t1.exon3;Parent=MS.gene065159.t1 |
| chr1.2 | CDS | 81698711 | 81698793 | 81698711 | ID=cds.MS.gene065159.t1;Parent=MS.gene065159.t1 |
| chr1.2 | exon | 81698877 | 81698988 | 81698877 | ID=MS.gene065159.t1.exon4;Parent=MS.gene065159.t1 |
| chr1.2 | CDS | 81698877 | 81698988 | 81698877 | ID=cds.MS.gene065159.t1;Parent=MS.gene065159.t1 |
| chr1.2 | exon | 81699080 | 81699184 | 81699080 | ID=MS.gene065159.t1.exon5;Parent=MS.gene065159.t1 |
| chr1.2 | CDS | 81699080 | 81699184 | 81699080 | ID=cds.MS.gene065159.t1;Parent=MS.gene065159.t1 |
| chr1.2 | exon | 81699261 | 81699311 | 81699261 | ID=MS.gene065159.t1.exon6;Parent=MS.gene065159.t1 |
| chr1.2 | CDS | 81699261 | 81699311 | 81699261 | ID=cds.MS.gene065159.t1;Parent=MS.gene065159.t1 |
| chr1.2 | exon | 81700417 | 81700696 | 81700417 | ID=MS.gene065159.t1.exon7;Parent=MS.gene065159.t1 |
| chr1.2 | CDS | 81700417 | 81700696 | 81700417 | ID=cds.MS.gene065159.t1;Parent=MS.gene065159.t1 |
| chr1.2 | exon | 81700792 | 81700940 | 81700792 | ID=MS.gene065159.t1.exon8;Parent=MS.gene065159.t1 |
| chr1.2 | CDS | 81700792 | 81700940 | 81700792 | ID=cds.MS.gene065159.t1;Parent=MS.gene065159.t1 |
| chr1.2 | exon | 81701021 | 81701074 | 81701021 | ID=MS.gene065159.t1.exon9;Parent=MS.gene065159.t1 |
| chr1.2 | CDS | 81701021 | 81701074 | 81701021 | ID=cds.MS.gene065159.t1;Parent=MS.gene065159.t1 |
| chr1.2 | exon | 81701684 | 81701926 | 81701684 | ID=MS.gene065159.t1.exon10;Parent=MS.gene065159.t1 |
| chr1.2 | CDS | 81701684 | 81701926 | 81701684 | ID=cds.MS.gene065159.t1;Parent=MS.gene065159.t1 |
| Gene Sequence |
| Protein sequence |
