Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene073785.t1 | RYR71178.1 | 100 | 136 | 0 | 0 | 1 | 136 | 8 | 143 | 2.00E-69 | 271.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene073785.t1 | P46297 | 99.3 | 136 | 1 | 0 | 1 | 136 | 7 | 142 | 1.1e-71 | 270.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene073785.t1 | A0A1S3TNG0 | 100.0 | 136 | 0 | 0 | 1 | 136 | 7 | 142 | 1.5e-69 | 271.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049255 | MS.gene073785 | 0.860044 | 2.72E-63 | -1.69E-46 |
MS.gene049340 | MS.gene073785 | 0.824656 | 7.17E-54 | -1.69E-46 |
MS.gene049341 | MS.gene073785 | 0.864761 | 9.64E-65 | -1.69E-46 |
MS.gene049756 | MS.gene073785 | 0.804687 | 1.92E-49 | -1.69E-46 |
MS.gene049821 | MS.gene073785 | 0.850578 | 1.55E-60 | -1.69E-46 |
MS.gene049824 | MS.gene073785 | 0.829786 | 4.24E-55 | -1.69E-46 |
MS.gene049825 | MS.gene073785 | 0.841233 | 5.38E-58 | -1.69E-46 |
MS.gene049873 | MS.gene073785 | 0.842802 | 2.07E-58 | -1.69E-46 |
MS.gene050020 | MS.gene073785 | 0.811448 | 6.97E-51 | -1.69E-46 |
MS.gene050277 | MS.gene073785 | 0.874032 | 9.27E-68 | -1.69E-46 |
MS.gene050303 | MS.gene073785 | 0.85919 | 4.91E-63 | -1.69E-46 |
MS.gene050689 | MS.gene073785 | 0.802551 | 5.32E-49 | -1.69E-46 |
MS.gene050807 | MS.gene073785 | 0.832516 | 9.04E-56 | -1.69E-46 |
MS.gene050815 | MS.gene073785 | 0.806586 | 7.65E-50 | -1.69E-46 |
MS.gene050838 | MS.gene073785 | 0.837378 | 5.38E-57 | -1.69E-46 |
MS.gene050901 | MS.gene073785 | 0.802624 | 5.14E-49 | -1.69E-46 |
MS.gene050916 | MS.gene073785 | 0.8166 | 5.09E-52 | -1.69E-46 |
MS.gene051063 | MS.gene073785 | 0.824639 | 7.24E-54 | -1.69E-46 |
MS.gene051247 | MS.gene073785 | 0.802526 | 5.38E-49 | -1.69E-46 |
MS.gene051328 | MS.gene073785 | 0.867445 | 1.36E-65 | -1.69E-46 |
MS.gene051330 | MS.gene073785 | 0.836669 | 8.17E-57 | -1.69E-46 |
MS.gene05134 | MS.gene073785 | 0.846147 | 2.61E-59 | -1.69E-46 |
MS.gene051633 | MS.gene073785 | 0.826797 | 2.23E-54 | -1.69E-46 |
MS.gene051700 | MS.gene073785 | 0.848661 | 5.32E-60 | -1.69E-46 |
MS.gene051719 | MS.gene073785 | 0.810177 | 1.31E-50 | -1.69E-46 |
MS.gene051720 | MS.gene073785 | 0.804763 | 1.85E-49 | -1.69E-46 |
MS.gene051746 | MS.gene073785 | 0.868488 | 6.29E-66 | -1.69E-46 |
MS.gene051748 | MS.gene073785 | 0.846679 | 1.87E-59 | -1.69E-46 |
MS.gene051791 | MS.gene073785 | 0.821449 | 4.01E-53 | -1.69E-46 |
MS.gene051850 | MS.gene073785 | 0.81078 | 9.72E-51 | -1.69E-46 |
MS.gene05188 | MS.gene073785 | 0.842531 | 2.44E-58 | -1.69E-46 |
MS.gene051903 | MS.gene073785 | 0.837067 | 6.47E-57 | -1.69E-46 |
MS.gene051975 | MS.gene073785 | 0.809628 | 1.72E-50 | -1.69E-46 |
MS.gene052133 | MS.gene073785 | 0.858211 | 9.63E-63 | -1.69E-46 |
MS.gene052286 | MS.gene073785 | 0.829662 | 4.54E-55 | -1.69E-46 |
MS.gene052302 | MS.gene073785 | 0.825579 | 4.34E-54 | -1.69E-46 |
MS.gene052376 | MS.gene073785 | 0.832137 | 1.12E-55 | -1.69E-46 |
MS.gene052879 | MS.gene073785 | 0.823032 | 1.72E-53 | -1.69E-46 |
MS.gene052947 | MS.gene073785 | 0.906777 | 1.03E-80 | -1.69E-46 |
MS.gene053122 | MS.gene073785 | 0.802982 | 4.33E-49 | -1.69E-46 |
MS.gene053226 | MS.gene073785 | 0.820998 | 5.10E-53 | -1.69E-46 |
MS.gene053230 | MS.gene073785 | 0.803675 | 3.11E-49 | -1.69E-46 |
MS.gene053294 | MS.gene073785 | 0.805583 | 1.24E-49 | -1.69E-46 |
MS.gene053563 | MS.gene073785 | 0.802539 | 5.35E-49 | -1.69E-46 |
MS.gene053581 | MS.gene073785 | 0.808434 | 3.10E-50 | -1.69E-46 |
MS.gene053599 | MS.gene073785 | 0.810621 | 1.05E-50 | -1.69E-46 |
MS.gene05364 | MS.gene073785 | 0.819024 | 1.44E-52 | -1.69E-46 |
MS.gene055162 | MS.gene073785 | 0.813521 | 2.45E-51 | -1.69E-46 |
MS.gene055465 | MS.gene073785 | 0.813907 | 2.02E-51 | -1.69E-46 |
MS.gene055466 | MS.gene073785 | 0.828252 | 9.97E-55 | -1.69E-46 |
MS.gene055468 | MS.gene073785 | 0.835363 | 1.75E-56 | -1.69E-46 |
MS.gene055512 | MS.gene073785 | 0.809302 | 2.02E-50 | -1.69E-46 |
MS.gene055555 | MS.gene073785 | 0.810083 | 1.37E-50 | -1.69E-46 |
MS.gene055580 | MS.gene073785 | -0.835428 | 1.69E-56 | -1.69E-46 |
MS.gene055608 | MS.gene073785 | 0.803519 | 3.35E-49 | -1.69E-46 |
MS.gene055778 | MS.gene073785 | 0.820667 | 6.08E-53 | -1.69E-46 |
MS.gene055808 | MS.gene073785 | 0.889904 | 1.59E-73 | -1.69E-46 |
MS.gene055912 | MS.gene073785 | 0.808792 | 2.60E-50 | -1.69E-46 |
MS.gene056043 | MS.gene073785 | -0.83383 | 4.26E-56 | -1.69E-46 |
MS.gene056075 | MS.gene073785 | 0.838342 | 3.04E-57 | -1.69E-46 |
MS.gene056091 | MS.gene073785 | 0.858247 | 9.39E-63 | -1.69E-46 |
MS.gene056215 | MS.gene073785 | 0.869304 | 3.42E-66 | -1.69E-46 |
MS.gene056601 | MS.gene073785 | 0.818693 | 1.72E-52 | -1.69E-46 |
MS.gene056631 | MS.gene073785 | 0.902397 | 1.01E-78 | -1.69E-46 |
MS.gene056760 | MS.gene073785 | 0.806016 | 1.01E-49 | -1.69E-46 |
MS.gene056986 | MS.gene073785 | 0.809932 | 1.48E-50 | -1.69E-46 |
MS.gene057057 | MS.gene073785 | 0.828274 | 9.85E-55 | -1.69E-46 |
MS.gene057060 | MS.gene073785 | 0.805706 | 1.17E-49 | -1.69E-46 |
MS.gene057094 | MS.gene073785 | 0.837395 | 5.33E-57 | -1.69E-46 |
MS.gene057140 | MS.gene073785 | 0.815854 | 7.47E-52 | -1.69E-46 |
MS.gene057234 | MS.gene073785 | 0.817615 | 3.01E-52 | -1.69E-46 |
MS.gene057693 | MS.gene073785 | 0.811324 | 7.41E-51 | -1.69E-46 |
MS.gene057694 | MS.gene073785 | 0.800884 | 1.17E-48 | -1.69E-46 |
MS.gene057705 | MS.gene073785 | 0.877313 | 6.95E-69 | -1.69E-46 |
MS.gene058055 | MS.gene073785 | 0.806232 | 9.09E-50 | -1.69E-46 |
MS.gene058084 | MS.gene073785 | 0.833888 | 4.12E-56 | -1.69E-46 |
MS.gene058216 | MS.gene073785 | 0.80924 | 2.09E-50 | -1.69E-46 |
MS.gene058238 | MS.gene073785 | 0.816644 | 4.97E-52 | -1.69E-46 |
MS.gene058852 | MS.gene073785 | 0.811686 | 6.18E-51 | -1.69E-46 |
MS.gene058906 | MS.gene073785 | 0.860916 | 1.48E-63 | -1.69E-46 |
MS.gene059317 | MS.gene073785 | 0.813659 | 2.29E-51 | -1.69E-46 |
MS.gene05953 | MS.gene073785 | 0.829152 | 6.04E-55 | -1.69E-46 |
MS.gene05954 | MS.gene073785 | 0.845366 | 4.25E-59 | -1.69E-46 |
MS.gene05978 | MS.gene073785 | 0.817295 | 3.55E-52 | -1.69E-46 |
MS.gene06001 | MS.gene073785 | 0.921599 | 2.91E-88 | -1.69E-46 |
MS.gene060194 | MS.gene073785 | 0.809082 | 2.26E-50 | -1.69E-46 |
MS.gene060429 | MS.gene073785 | 0.910137 | 2.62E-82 | -1.69E-46 |
MS.gene060586 | MS.gene073785 | 0.815498 | 8.97E-52 | -1.69E-46 |
MS.gene060587 | MS.gene073785 | 0.830797 | 2.40E-55 | -1.69E-46 |
MS.gene060907 | MS.gene073785 | 0.80014 | 1.66E-48 | -1.69E-46 |
MS.gene060917 | MS.gene073785 | 0.847537 | 1.09E-59 | -1.69E-46 |
MS.gene061176 | MS.gene073785 | 0.802098 | 6.59E-49 | -1.69E-46 |
MS.gene061177 | MS.gene073785 | 0.801628 | 8.23E-49 | -1.69E-46 |
MS.gene061178 | MS.gene073785 | 0.801547 | 8.55E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene073785.t1 | MTR_1g066860 | 100.000 | 136 | 0 | 0 | 1 | 136 | 1 | 136 | 1.11e-96 | 274 |
MS.gene073785.t1 | MTR_1g066860 | 100.000 | 136 | 0 | 0 | 1 | 136 | 7 | 142 | 1.16e-96 | 274 |
MS.gene073785.t1 | MTR_7g100720 | 94.118 | 136 | 8 | 0 | 1 | 136 | 7 | 142 | 1.59e-90 | 259 |
MS.gene073785.t1 | MTR_7g061155 | 96.610 | 118 | 4 | 0 | 19 | 136 | 138 | 255 | 3.89e-80 | 236 |
MS.gene073785.t1 | MTR_7g063460 | 60.000 | 55 | 20 | 1 | 48 | 102 | 28 | 80 | 1.78e-15 | 67.0 |
MS.gene073785.t1 | MTR_8g447270 | 64.151 | 53 | 17 | 1 | 48 | 100 | 17 | 67 | 1.68e-14 | 65.5 |
MS.gene073785.t1 | MTR_4g038400 | 67.347 | 49 | 13 | 1 | 50 | 98 | 103 | 148 | 1.81e-12 | 60.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene073785.t1 | AT5G02960 | 95.588 | 136 | 6 | 0 | 1 | 136 | 7 | 142 | 6.49e-91 | 259 |
MS.gene073785.t1 | AT3G09680 | 93.382 | 136 | 9 | 0 | 1 | 136 | 7 | 142 | 1.07e-87 | 251 |
Find 37 sgRNAs with CRISPR-Local
Find 53 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCAAAGTTGTGAAGGTCTC+TGG | 0.336661 | 1.1:+49281327 | MS.gene073785:CDS |
ACACTTACGAATAGCTGAAT+TGG | 0.338181 | 1.1:-49281006 | None:intergenic |
TCTCCTTCTTCTCCTTGAAA+AGG | 0.352760 | 1.1:-49281365 | None:intergenic |
ATTCCACAAATCTAAGATCT+TGG | 0.379899 | 1.1:-49281390 | None:intergenic |
CATGCTGTGGGAGATATTCC+TGG | 0.414411 | 1.1:+49281297 | MS.gene073785:CDS |
CAGCTATTCGTAAGTGTGCC+AGG | 0.416301 | 1.1:+49281012 | MS.gene073785:CDS |
CTCCTTCTTCTCCTTGAAAA+GGG | 0.418297 | 1.1:-49281364 | None:intergenic |
GTAGTTTAGACAACCATCAT+TGG | 0.437937 | 1.1:-49281078 | None:intergenic |
GCTGCCTTTGTTCCCAATGA+TGG | 0.449096 | 1.1:+49281065 | MS.gene073785:CDS |
TCATACAAGAAGTCTCATCT+TGG | 0.473075 | 1.1:+49280808 | MS.gene073785:CDS |
CACTTACGAATAGCTGAATT+GGG | 0.473089 | 1.1:-49281005 | None:intergenic |
TCAAAGTTGTGAAGGTCTCT+GGG | 0.485775 | 1.1:+49281328 | MS.gene073785:CDS |
TGCTGGTTCTTCCCACGCAA+AGG | 0.487634 | 1.1:+49280852 | MS.gene073785:CDS |
CTCACCGCAGGAGGCAAAGG+TGG | 0.491520 | 1.1:+49280776 | MS.gene073785:CDS |
TAGTTTAGACAACCATCATT+GGG | 0.495609 | 1.1:-49281077 | None:intergenic |
GCTGGTTCTTCCCACGCAAA+GGG | 0.497054 | 1.1:+49280853 | MS.gene073785:CDS |
ATTGCTGGATTTGGAAGAAA+GGG | 0.499669 | 1.1:+49281273 | MS.gene073785:CDS |
GCGTGGGAAGAACCAGCAAA+AGG | 0.504542 | 1.1:-49280847 | None:intergenic |
CATACAAGAAGTCTCATCTT+GGG | 0.508352 | 1.1:+49280809 | MS.gene073785:CDS |
GATTGCTGGATTTGGAAGAA+AGG | 0.508603 | 1.1:+49281272 | MS.gene073785:CDS |
AGGGTACAACTAATCAAGAA+TGG | 0.513747 | 1.1:+49281032 | MS.gene073785:CDS |
CAGCCCACCTTTGCCTCCTG+CGG | 0.522174 | 1.1:-49280780 | None:intergenic |
CGAGGACAATTCCCTTTGCG+TGG | 0.534957 | 1.1:-49280864 | None:intergenic |
GCAAGCTGAAGTCTCACCGC+AGG | 0.557712 | 1.1:+49280764 | MS.gene073785:CDS |
AGTCTCACCGCAGGAGGCAA+AGG | 0.562641 | 1.1:+49280773 | MS.gene073785:CDS |
AGCTGAAGTCTCACCGCAGG+AGG | 0.569090 | 1.1:+49280767 | MS.gene073785:CDS |
AGTCTCATCTTGGGAATGAG+TGG | 0.571456 | 1.1:+49280818 | MS.gene073785:CDS |
ATTCTTGATTAGTTGTACCC+TGG | 0.574592 | 1.1:-49281030 | None:intergenic |
ACAACTTTGAATCTAACTCC+AGG | 0.579252 | 1.1:-49281315 | None:intergenic |
TGGAAGAAAGGGTCATGCTG+TGG | 0.584767 | 1.1:+49281284 | MS.gene073785:CDS |
GGAAGAAAGGGTCATGCTGT+GGG | 0.588458 | 1.1:+49281285 | MS.gene073785:CDS |
TCACCGCAGGAGGCAAAGGT+GGG | 0.600190 | 1.1:+49280777 | MS.gene073785:CDS |
AGTTAGATTCAAAGTTGTGA+AGG | 0.600905 | 1.1:+49281320 | MS.gene073785:CDS |
ACAACCATCATTGGGAACAA+AGG | 0.603558 | 1.1:-49281069 | None:intergenic |
GAGGACAATTCCCTTTGCGT+GGG | 0.632164 | 1.1:-49280863 | None:intergenic |
AGCTATTCGTAAGTGTGCCA+GGG | 0.637371 | 1.1:+49281013 | MS.gene073785:CDS |
CAAAGTTGTGAAGGTCTCTG+GGG | 0.715188 | 1.1:+49281329 | MS.gene073785:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TCAAATAAAATTCTAGTAAA+AGG | - | chr1.1:49280922-49280941 | None:intergenic | 15.0% |
!!! | GATTGTTGTTTTATTTACAG+TGG | + | chr1.1:49280966-49280985 | MS.gene073785:intron | 25.0% |
!!! | TTTTATTTACAGTGGTATTG+AGG | + | chr1.1:49280974-49280993 | MS.gene073785:intron | 25.0% |
ACCAATAGAAAATATGAGCA+AGG | - | chr1.1:49281122-49281141 | None:intergenic | 30.0% | |
AGTTAGATTCAAAGTTGTGA+AGG | + | chr1.1:49281320-49281339 | MS.gene073785:CDS | 30.0% | |
TAGTTTAGACAACCATCATT+GGG | - | chr1.1:49281080-49281099 | None:intergenic | 30.0% | |
TGACTTTAAACTGATATGTC+TGG | + | chr1.1:49281150-49281169 | MS.gene073785:intron | 30.0% | |
! | TCCTTGCTCATATTTTCTAT+TGG | + | chr1.1:49281118-49281137 | MS.gene073785:intron | 30.0% |
ACAACTTTGAATCTAACTCC+AGG | - | chr1.1:49281318-49281337 | None:intergenic | 35.0% | |
ACACTTACGAATAGCTGAAT+TGG | - | chr1.1:49281009-49281028 | None:intergenic | 35.0% | |
AGGGTACAACTAATCAAGAA+TGG | + | chr1.1:49281032-49281051 | MS.gene073785:CDS | 35.0% | |
ATTGCTGGATTTGGAAGAAA+GGG | + | chr1.1:49281273-49281292 | MS.gene073785:CDS | 35.0% | |
CACTTACGAATAGCTGAATT+GGG | - | chr1.1:49281008-49281027 | None:intergenic | 35.0% | |
CATACAAGAAGTCTCATCTT+GGG | + | chr1.1:49280809-49280828 | MS.gene073785:CDS | 35.0% | |
GTAGTTTAGACAACCATCAT+TGG | - | chr1.1:49281081-49281100 | None:intergenic | 35.0% | |
TCATACAAGAAGTCTCATCT+TGG | + | chr1.1:49280808-49280827 | MS.gene073785:CDS | 35.0% | |
! | ATTCTTGATTAGTTGTACCC+TGG | - | chr1.1:49281033-49281052 | None:intergenic | 35.0% |
!!! | GAAGTTTTGATTGCTGGATT+TGG | + | chr1.1:49281264-49281283 | MS.gene073785:CDS | 35.0% |
ACAACCATCATTGGGAACAA+AGG | - | chr1.1:49281072-49281091 | None:intergenic | 40.0% | |
ACACACAATGTCACACAAGA+TGG | - | chr1.1:49281226-49281245 | None:intergenic | 40.0% | |
CTCCTTCTTCTCCTTGAAAA+GGG | - | chr1.1:49281367-49281386 | None:intergenic | 40.0% | |
GATGTAAGAGTGGTTAAGCT+TGG | + | chr1.1:49280891-49280910 | MS.gene073785:intron | 40.0% | |
GATTGCTGGATTTGGAAGAA+AGG | + | chr1.1:49281272-49281291 | MS.gene073785:CDS | 40.0% | |
TCAAAGTTGTGAAGGTCTCT+GGG | + | chr1.1:49281328-49281347 | MS.gene073785:CDS | 40.0% | |
TCCTCGAAAAGATGTAAGAG+TGG | + | chr1.1:49280881-49280900 | MS.gene073785:intron | 40.0% | |
TCTCCTTCTTCTCCTTGAAA+AGG | - | chr1.1:49281368-49281387 | None:intergenic | 40.0% | |
TTCAAAGTTGTGAAGGTCTC+TGG | + | chr1.1:49281327-49281346 | MS.gene073785:CDS | 40.0% | |
! | ACCACTCTTACATCTTTTCG+AGG | - | chr1.1:49280885-49280904 | None:intergenic | 40.0% |
!!! | CAGGATGAAGTTTTGATTGC+TGG | + | chr1.1:49281258-49281277 | MS.gene073785:intron | 40.0% |
AGCTATTCGTAAGTGTGCCA+GGG | + | chr1.1:49281013-49281032 | MS.gene073785:CDS | 45.0% | |
AGTCTCATCTTGGGAATGAG+TGG | + | chr1.1:49280818-49280837 | MS.gene073785:CDS | 45.0% | |
CAAAGTTGTGAAGGTCTCTG+GGG | + | chr1.1:49281329-49281348 | MS.gene073785:CDS | 45.0% | |
GTGACATTGTGTGTGACTGA+TGG | + | chr1.1:49281232-49281251 | MS.gene073785:intron | 45.0% | |
! | GAGTGGAAGAAACCTTTTGC+TGG | + | chr1.1:49280835-49280854 | MS.gene073785:CDS | 45.0% |
! | GTCTCTTCTTGCCCTTTTCA+AGG | + | chr1.1:49281353-49281372 | MS.gene073785:CDS | 45.0% |
!! | TGCCCTTTTCAAGGAGAAGA+AGG | + | chr1.1:49281362-49281381 | MS.gene073785:CDS | 45.0% |
CAGCTATTCGTAAGTGTGCC+AGG | + | chr1.1:49281012-49281031 | MS.gene073785:CDS | 50.0% | |
CATGCTGTGGGAGATATTCC+TGG | + | chr1.1:49281297-49281316 | MS.gene073785:CDS | 50.0% | |
GAGGACAATTCCCTTTGCGT+GGG | - | chr1.1:49280866-49280885 | None:intergenic | 50.0% | |
GCTGCCTTTGTTCCCAATGA+TGG | + | chr1.1:49281065-49281084 | MS.gene073785:CDS | 50.0% | |
GGAAGAAAGGGTCATGCTGT+GGG | + | chr1.1:49281285-49281304 | MS.gene073785:CDS | 50.0% | |
TGGAAGAAAGGGTCATGCTG+TGG | + | chr1.1:49281284-49281303 | MS.gene073785:CDS | 50.0% | |
TGTGTGTGACTGATGGTTGC+AGG | + | chr1.1:49281239-49281258 | MS.gene073785:intron | 50.0% | |
CGAGGACAATTCCCTTTGCG+TGG | - | chr1.1:49280867-49280886 | None:intergenic | 55.0% | |
GCGTGGGAAGAACCAGCAAA+AGG | - | chr1.1:49280850-49280869 | None:intergenic | 55.0% | |
! | GCTGGTTCTTCCCACGCAAA+GGG | + | chr1.1:49280853-49280872 | MS.gene073785:CDS | 55.0% |
!! | TGCTGGTTCTTCCCACGCAA+AGG | + | chr1.1:49280852-49280871 | MS.gene073785:CDS | 55.0% |
AGCTGAAGTCTCACCGCAGG+AGG | + | chr1.1:49280767-49280786 | MS.gene073785:CDS | 60.0% | |
AGTCTCACCGCAGGAGGCAA+AGG | + | chr1.1:49280773-49280792 | MS.gene073785:CDS | 60.0% | |
GCAAGCTGAAGTCTCACCGC+AGG | + | chr1.1:49280764-49280783 | MS.gene073785:CDS | 60.0% | |
TCACCGCAGGAGGCAAAGGT+GGG | + | chr1.1:49280777-49280796 | MS.gene073785:CDS | 60.0% | |
CAGCCCACCTTTGCCTCCTG+CGG | - | chr1.1:49280783-49280802 | None:intergenic | 65.0% | |
CTCACCGCAGGAGGCAAAGG+TGG | + | chr1.1:49280776-49280795 | MS.gene073785:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.1 | gene | 49280751 | 49281401 | 49280751 | ID=MS.gene073785 |
chr1.1 | mRNA | 49280751 | 49281401 | 49280751 | ID=MS.gene073785.t1;Parent=MS.gene073785 |
chr1.1 | exon | 49280751 | 49280893 | 49280751 | ID=MS.gene073785.t1.exon1;Parent=MS.gene073785.t1 |
chr1.1 | CDS | 49280751 | 49280893 | 49280751 | ID=cds.MS.gene073785.t1;Parent=MS.gene073785.t1 |
chr1.1 | exon | 49280986 | 49281112 | 49280986 | ID=MS.gene073785.t1.exon2;Parent=MS.gene073785.t1 |
chr1.1 | CDS | 49280986 | 49281112 | 49280986 | ID=cds.MS.gene073785.t1;Parent=MS.gene073785.t1 |
chr1.1 | exon | 49281261 | 49281401 | 49281261 | ID=MS.gene073785.t1.exon3;Parent=MS.gene073785.t1 |
chr1.1 | CDS | 49281261 | 49281401 | 49281261 | ID=cds.MS.gene073785.t1;Parent=MS.gene073785.t1 |
Gene Sequence |
Protein sequence |