Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23219.t1 | XP_013446781.1 | 92.4 | 303 | 20 | 1 | 1 | 303 | 1 | 300 | 3.50E-162 | 580.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23219.t1 | A0A072TVA7 | 92.4 | 303 | 20 | 1 | 1 | 303 | 1 | 300 | 2.5e-162 | 580.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049222 | MS.gene23219 | 0.823287 | 1.50E-53 | -1.69E-46 |
| MS.gene049232 | MS.gene23219 | 0.853566 | 2.20E-61 | -1.69E-46 |
| MS.gene049285 | MS.gene23219 | 0.810502 | 1.12E-50 | -1.69E-46 |
| MS.gene049320 | MS.gene23219 | 0.819477 | 1.14E-52 | -1.69E-46 |
| MS.gene049656 | MS.gene23219 | 0.806107 | 9.66E-50 | -1.69E-46 |
| MS.gene049657 | MS.gene23219 | 0.813592 | 2.37E-51 | -1.69E-46 |
| MS.gene05010 | MS.gene23219 | 0.836343 | 9.89E-57 | -1.69E-46 |
| MS.gene050170 | MS.gene23219 | 0.830028 | 3.70E-55 | -1.69E-46 |
| MS.gene050216 | MS.gene23219 | 0.813314 | 2.73E-51 | -1.69E-46 |
| MS.gene050323 | MS.gene23219 | 0.835108 | 2.03E-56 | -1.69E-46 |
| MS.gene050381 | MS.gene23219 | -0.834044 | 3.76E-56 | -1.69E-46 |
| MS.gene050496 | MS.gene23219 | 0.817322 | 3.50E-52 | -1.69E-46 |
| MS.gene050502 | MS.gene23219 | 0.818859 | 1.57E-52 | -1.69E-46 |
| MS.gene050504 | MS.gene23219 | 0.860555 | 1.90E-63 | -1.69E-46 |
| MS.gene050518 | MS.gene23219 | 0.812589 | 3.93E-51 | -1.69E-46 |
| MS.gene050577 | MS.gene23219 | 0.840822 | 6.90E-58 | -1.69E-46 |
| MS.gene050612 | MS.gene23219 | 0.812989 | 3.21E-51 | -1.69E-46 |
| MS.gene050675 | MS.gene23219 | 0.811091 | 8.33E-51 | -1.69E-46 |
| MS.gene050699 | MS.gene23219 | 0.812262 | 4.63E-51 | -1.69E-46 |
| MS.gene050747 | MS.gene23219 | 0.811593 | 6.48E-51 | -1.69E-46 |
| MS.gene050868 | MS.gene23219 | 0.86253 | 4.75E-64 | -1.69E-46 |
| MS.gene050871 | MS.gene23219 | 0.867703 | 1.13E-65 | -1.69E-46 |
| MS.gene050950 | MS.gene23219 | 0.807417 | 5.11E-50 | -1.69E-46 |
| MS.gene050986 | MS.gene23219 | 0.84548 | 3.96E-59 | -1.69E-46 |
| MS.gene05141 | MS.gene23219 | -0.820401 | 6.99E-53 | -1.69E-46 |
| MS.gene051509 | MS.gene23219 | 0.858035 | 1.09E-62 | -1.69E-46 |
| MS.gene051551 | MS.gene23219 | 0.826004 | 3.44E-54 | -1.69E-46 |
| MS.gene051560 | MS.gene23219 | 0.868682 | 5.44E-66 | -1.69E-46 |
| MS.gene051941 | MS.gene23219 | 0.814126 | 1.81E-51 | -1.69E-46 |
| MS.gene051946 | MS.gene23219 | -0.830843 | 2.34E-55 | -1.69E-46 |
| MS.gene052164 | MS.gene23219 | 0.87255 | 2.92E-67 | -1.69E-46 |
| MS.gene052413 | MS.gene23219 | 0.827638 | 1.40E-54 | -1.69E-46 |
| MS.gene052482 | MS.gene23219 | 0.845256 | 4.55E-59 | -1.69E-46 |
| MS.gene052486 | MS.gene23219 | 0.85029 | 1.87E-60 | -1.69E-46 |
| MS.gene052503 | MS.gene23219 | 0.835252 | 1.87E-56 | -1.69E-46 |
| MS.gene052823 | MS.gene23219 | 0.84614 | 2.62E-59 | -1.69E-46 |
| MS.gene052825 | MS.gene23219 | 0.839514 | 1.51E-57 | -1.69E-46 |
| MS.gene052966 | MS.gene23219 | 0.815116 | 1.09E-51 | -1.69E-46 |
| MS.gene053203 | MS.gene23219 | 0.855506 | 6.03E-62 | -1.69E-46 |
| MS.gene053213 | MS.gene23219 | 0.817137 | 3.85E-52 | -1.69E-46 |
| MS.gene053286 | MS.gene23219 | 0.826527 | 2.58E-54 | -1.69E-46 |
| MS.gene053436 | MS.gene23219 | 0.854496 | 1.18E-61 | -1.69E-46 |
| MS.gene053480 | MS.gene23219 | 0.803749 | 3.00E-49 | -1.69E-46 |
| MS.gene053549 | MS.gene23219 | -0.819762 | 9.80E-53 | -1.69E-46 |
| MS.gene053574 | MS.gene23219 | 0.831052 | 2.08E-55 | -1.69E-46 |
| MS.gene053626 | MS.gene23219 | 0.860427 | 2.08E-63 | -1.69E-46 |
| MS.gene054003 | MS.gene23219 | 0.845688 | 3.47E-59 | -1.69E-46 |
| MS.gene054595 | MS.gene23219 | 0.859409 | 4.22E-63 | -1.69E-46 |
| MS.gene054706 | MS.gene23219 | -0.801348 | 9.40E-49 | -1.69E-46 |
| MS.gene05470 | MS.gene23219 | 0.833847 | 4.22E-56 | -1.69E-46 |
| MS.gene054954 | MS.gene23219 | 0.83493 | 2.25E-56 | -1.69E-46 |
| MS.gene055362 | MS.gene23219 | 0.823081 | 1.68E-53 | -1.69E-46 |
| MS.gene055502 | MS.gene23219 | 0.828221 | 1.01E-54 | -1.69E-46 |
| MS.gene055577 | MS.gene23219 | 0.816709 | 4.81E-52 | -1.69E-46 |
| MS.gene055629 | MS.gene23219 | 0.871243 | 7.93E-67 | -1.69E-46 |
| MS.gene055750 | MS.gene23219 | 0.808899 | 2.47E-50 | -1.69E-46 |
| MS.gene05589 | MS.gene23219 | 0.835998 | 1.21E-56 | -1.69E-46 |
| MS.gene05601 | MS.gene23219 | 0.806937 | 6.45E-50 | -1.69E-46 |
| MS.gene056040 | MS.gene23219 | 0.848621 | 5.45E-60 | -1.69E-46 |
| MS.gene056166 | MS.gene23219 | 0.837064 | 6.48E-57 | -1.69E-46 |
| MS.gene056310 | MS.gene23219 | -0.816133 | 6.47E-52 | -1.69E-46 |
| MS.gene056313 | MS.gene23219 | -0.819593 | 1.07E-52 | -1.69E-46 |
| MS.gene056446 | MS.gene23219 | 0.832807 | 7.66E-56 | -1.69E-46 |
| MS.gene056504 | MS.gene23219 | 0.861013 | 1.38E-63 | -1.69E-46 |
| MS.gene056510 | MS.gene23219 | 0.854677 | 1.05E-61 | -1.69E-46 |
| MS.gene056647 | MS.gene23219 | -0.804857 | 1.77E-49 | -1.69E-46 |
| MS.gene056657 | MS.gene23219 | 0.821706 | 3.50E-53 | -1.69E-46 |
| MS.gene056878 | MS.gene23219 | 0.838503 | 2.77E-57 | -1.69E-46 |
| MS.gene057014 | MS.gene23219 | -0.810463 | 1.14E-50 | -1.69E-46 |
| MS.gene057086 | MS.gene23219 | 0.825561 | 4.38E-54 | -1.69E-46 |
| MS.gene05787 | MS.gene23219 | 0.860766 | 1.64E-63 | -1.69E-46 |
| MS.gene058041 | MS.gene23219 | 0.800488 | 1.41E-48 | -1.69E-46 |
| MS.gene058157 | MS.gene23219 | 0.835839 | 1.33E-56 | -1.69E-46 |
| MS.gene058171 | MS.gene23219 | -0.819422 | 1.17E-52 | -1.69E-46 |
| MS.gene058173 | MS.gene23219 | -0.81392 | 2.00E-51 | -1.69E-46 |
| MS.gene058175 | MS.gene23219 | -0.8151 | 1.10E-51 | -1.69E-46 |
| MS.gene058183 | MS.gene23219 | 0.807754 | 4.33E-50 | -1.69E-46 |
| MS.gene05837 | MS.gene23219 | 0.830641 | 2.62E-55 | -1.69E-46 |
| MS.gene058419 | MS.gene23219 | 0.800708 | 1.27E-48 | -1.69E-46 |
| MS.gene058420 | MS.gene23219 | 0.874127 | 8.61E-68 | -1.69E-46 |
| MS.gene059022 | MS.gene23219 | 0.825435 | 4.70E-54 | -1.69E-46 |
| MS.gene059045 | MS.gene23219 | -0.810873 | 9.28E-51 | -1.69E-46 |
| MS.gene059223 | MS.gene23219 | -0.81248 | 4.15E-51 | -1.69E-46 |
| MS.gene059367 | MS.gene23219 | 0.863997 | 1.67E-64 | -1.69E-46 |
| MS.gene059368 | MS.gene23219 | 0.806888 | 6.61E-50 | -1.69E-46 |
| MS.gene059517 | MS.gene23219 | 0.85917 | 4.98E-63 | -1.69E-46 |
| MS.gene059680 | MS.gene23219 | 0.828117 | 1.07E-54 | -1.69E-46 |
| MS.gene059718 | MS.gene23219 | 0.814323 | 1.63E-51 | -1.69E-46 |
| MS.gene059865 | MS.gene23219 | 0.852777 | 3.70E-61 | -1.69E-46 |
| MS.gene06000 | MS.gene23219 | 0.851719 | 7.39E-61 | -1.69E-46 |
| MS.gene060187 | MS.gene23219 | -0.80334 | 3.65E-49 | -1.69E-46 |
| MS.gene060482 | MS.gene23219 | 0.843244 | 1.58E-58 | -1.69E-46 |
| MS.gene060595 | MS.gene23219 | -0.820501 | 6.64E-53 | -1.69E-46 |
| MS.gene060778 | MS.gene23219 | 0.883947 | 2.91E-71 | -1.69E-46 |
| MS.gene06077 | MS.gene23219 | 0.866713 | 2.33E-65 | -1.69E-46 |
| MS.gene060982 | MS.gene23219 | 0.835486 | 1.63E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23219.t1 | MTR_8g090055 | 92.409 | 303 | 20 | 1 | 1 | 303 | 1 | 300 | 0.0 | 557 |
| MS.gene23219.t1 | MTR_5g037310 | 39.552 | 268 | 136 | 8 | 13 | 265 | 10 | 266 | 3.37e-53 | 176 |
| MS.gene23219.t1 | MTR_5g037310 | 39.552 | 268 | 136 | 8 | 13 | 265 | 10 | 266 | 3.43e-53 | 176 |
| MS.gene23219.t1 | MTR_4g105550 | 28.261 | 276 | 163 | 10 | 13 | 265 | 12 | 275 | 1.30e-24 | 101 |
| MS.gene23219.t1 | MTR_4g123700 | 27.778 | 252 | 157 | 8 | 26 | 266 | 27 | 264 | 2.26e-21 | 92.4 |
| MS.gene23219.t1 | MTR_4g132450 | 27.407 | 270 | 154 | 11 | 27 | 272 | 32 | 283 | 3.99e-21 | 92.0 |
| MS.gene23219.t1 | MTR_2g023970 | 28.148 | 270 | 150 | 12 | 28 | 272 | 19 | 269 | 5.63e-20 | 88.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23219.t1 | AT1G10380 | 38.956 | 249 | 131 | 6 | 32 | 265 | 28 | 270 | 3.17e-43 | 150 |
| MS.gene23219.t1 | AT1G10380 | 38.956 | 249 | 131 | 6 | 32 | 265 | 28 | 270 | 7.75e-43 | 149 |
| MS.gene23219.t1 | AT1G11915 | 28.674 | 279 | 158 | 13 | 7 | 258 | 1 | 265 | 4.74e-21 | 92.0 |
| MS.gene23219.t1 | AT3G17350 | 29.134 | 254 | 149 | 10 | 33 | 268 | 31 | 271 | 3.10e-19 | 85.9 |
| MS.gene23219.t1 | AT3G17350 | 28.980 | 245 | 144 | 9 | 33 | 260 | 31 | 262 | 6.11e-18 | 82.8 |
| MS.gene23219.t1 | AT5G50290 | 26.357 | 258 | 154 | 11 | 32 | 265 | 21 | 266 | 1.15e-15 | 76.3 |
Find 92 sgRNAs with CRISPR-Local
Find 171 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAAAGTGGAGGAAGATATT+TGG | 0.258075 | 7.3:-53888554 | None:intergenic |
| CGGGGAACCTCGACGGCAAC+GGG | 0.267401 | 7.3:+53888721 | MS.gene23219:CDS |
| GTGTATGAAATGGAGGTTAT+AGG | 0.283646 | 7.3:-53888438 | None:intergenic |
| ATACAAGTCAAGTATCCTTT+TGG | 0.355121 | 7.3:+53888312 | MS.gene23219:CDS |
| TTTGATGTGCATGTTATGTA+TGG | 0.360995 | 7.3:-53888369 | None:intergenic |
| CTCACAACTAGTACATTTAG+TGG | 0.392056 | 7.3:-53888880 | None:intergenic |
| ACACAAACAAATCCACTTCC+TGG | 0.398611 | 7.3:-53888933 | None:intergenic |
| ATCAAAACCAGGATTTCCTT+TGG | 0.418071 | 7.3:+53889000 | MS.gene23219:CDS |
| GATCGTAATTAGAGCAATCA+AGG | 0.418096 | 7.3:-53888980 | None:intergenic |
| GTTATGTATGGGTTGAATAG+TGG | 0.421768 | 7.3:-53888357 | None:intergenic |
| GAATGTCTGGAGTTCCATCT+TGG | 0.421862 | 7.3:+53889815 | MS.gene23219:CDS |
| GTTAAGTCTATGCCAAAGTT+TGG | 0.422132 | 7.3:-53888522 | None:intergenic |
| GATCCTACTCATTGGGTTTG+TGG | 0.422171 | 7.3:+53888813 | MS.gene23219:CDS |
| TCAAAACCAGGATTTCCTTT+GGG | 0.424220 | 7.3:+53889001 | MS.gene23219:CDS |
| TTTGTTTGTGTTTGTAAAGG+TGG | 0.424363 | 7.3:+53888945 | MS.gene23219:CDS |
| TGTATGAAATGGAGGTTATA+GGG | 0.425846 | 7.3:-53888437 | None:intergenic |
| CCCTACCGATCCTACTCATT+GGG | 0.428780 | 7.3:+53888806 | MS.gene23219:CDS |
| CCGGGGAACCTCGACGGCAA+CGG | 0.439474 | 7.3:+53888720 | MS.gene23219:CDS |
| TATACACAACATGTGTTAGT+AGG | 0.444066 | 7.3:-53888693 | None:intergenic |
| TTTGGCACAGGTCCTGGTTG+CGG | 0.445245 | 7.3:+53888330 | MS.gene23219:CDS |
| TATGAACAGTTGGGAATGTC+TGG | 0.453180 | 7.3:+53889802 | MS.gene23219:intron |
| ACCCTACCGATCCTACTCAT+TGG | 0.464490 | 7.3:+53888805 | MS.gene23219:CDS |
| CAGAGTCCCAAAGGAAATCC+TGG | 0.467751 | 7.3:-53889007 | None:intergenic |
| ATGCAAACCTCACCAAACTT+TGG | 0.468525 | 7.3:+53888510 | MS.gene23219:CDS |
| TACATAACATGCACATCAAA+CGG | 0.472131 | 7.3:+53888372 | MS.gene23219:CDS |
| AAGTTGAGGAGGGTGGAAAG+AGG | 0.482013 | 7.3:-53888219 | None:intergenic |
| GTCTGGAGTTCCATCTTGGC+TGG | 0.482605 | 7.3:+53889819 | MS.gene23219:CDS |
| CACATGTTGTGTATACTCAC+CGG | 0.497181 | 7.3:+53888701 | MS.gene23219:CDS |
| ATCAAAAGAAGTGTCACAAA+TGG | 0.498238 | 7.3:-53888607 | None:intergenic |
| TACTCATTGGGTTTGTGGCG+TGG | 0.499146 | 7.3:+53888818 | MS.gene23219:CDS |
| GGATCATGAAGAAGTTGAGG+AGG | 0.499775 | 7.3:-53888230 | None:intergenic |
| AGTAGTAGTGGTAGTGCCAT+TGG | 0.501269 | 7.3:-53888192 | None:intergenic |
| GGAGGATCATGAAGAAGTTG+AGG | 0.505398 | 7.3:-53888233 | None:intergenic |
| GAAAGAGGTGGTAGTAGTAG+TGG | 0.510292 | 7.3:-53888204 | None:intergenic |
| CAACCAGGACCTGTGCCAAA+AGG | 0.520035 | 7.3:-53888327 | None:intergenic |
| AGTGGAAGTGGTGTATGAAA+TGG | 0.521135 | 7.3:-53888448 | None:intergenic |
| GAAAATGATACCAGCCAAGA+TGG | 0.521207 | 7.3:-53889829 | None:intergenic |
| GCAAGAGAGGAGGATGAAAG+TGG | 0.526113 | 7.3:-53888568 | None:intergenic |
| CCGTTGCCGTCGAGGTTCCC+CGG | 0.529751 | 7.3:-53888720 | None:intergenic |
| AATAGTGGGGATCCGCAACC+AGG | 0.530035 | 7.3:-53888342 | None:intergenic |
| CTCTAATTACGATCAAAACC+AGG | 0.530696 | 7.3:+53888989 | MS.gene23219:CDS |
| GGATACGCTCCTCCAGGAAG+TGG | 0.534984 | 7.3:+53888921 | MS.gene23219:CDS |
| CATGAAGAAGTTGAGGAGGG+TGG | 0.540295 | 7.3:-53888226 | None:intergenic |
| GGATTTGTTTGTGTTTGTAA+AGG | 0.540887 | 7.3:+53888942 | MS.gene23219:CDS |
| TGTGAGTATGAGAGTGGAAG+TGG | 0.545933 | 7.3:-53888460 | None:intergenic |
| ACTGGTGTTGAGGCTGTTGG+TGG | 0.547811 | 7.3:-53888267 | None:intergenic |
| ACATGTTGTGTATACTCACC+GGG | 0.550531 | 7.3:+53888702 | MS.gene23219:CDS |
| GAGAGTAGTGGTGGTGTGTG+TGG | 0.551922 | 7.3:+53888900 | MS.gene23219:CDS |
| TTGAGGAGGGTGGAAAGAGG+TGG | 0.552015 | 7.3:-53888216 | None:intergenic |
| TGCCCTCAAGTAGTCTCACT+TGG | 0.552797 | 7.3:+53888654 | MS.gene23219:CDS |
| CATTATCCTCCGATTACACT+AGG | 0.553212 | 7.3:-53889854 | None:intergenic |
| GGCAGTGCAAGTAGACATGT+AGG | 0.553764 | 7.3:-53888487 | None:intergenic |
| TTATGTATGGGTTGAATAGT+GGG | 0.557969 | 7.3:-53888356 | None:intergenic |
| CACACTGGTGTTGAGGCTGT+TGG | 0.558660 | 7.3:-53888270 | None:intergenic |
| TCAAGTCCCCGTTGCCGTCG+AGG | 0.567153 | 7.3:-53888728 | None:intergenic |
| GTCTATGCCAAAGTTTGGTG+AGG | 0.568396 | 7.3:-53888517 | None:intergenic |
| GGGTGGTGTGAGTATGAGAG+TGG | 0.568455 | 7.3:-53888466 | None:intergenic |
| GGAAGTGGTGTATGAAATGG+AGG | 0.572115 | 7.3:-53888445 | None:intergenic |
| GTGTGTGGATACGCTCCTCC+AGG | 0.572268 | 7.3:+53888915 | MS.gene23219:CDS |
| ACCCAATGAGTAGGATCGGT+AGG | 0.577418 | 7.3:-53888807 | None:intergenic |
| CTGTTGGTGGAGATGCTAAG+AGG | 0.583151 | 7.3:-53888254 | None:intergenic |
| GTAATTAGAGCAATCAAGGC+TGG | 0.584195 | 7.3:-53888976 | None:intergenic |
| AGAGAGGAGGATGAAAGTGG+AGG | 0.585943 | 7.3:-53888565 | None:intergenic |
| TGATTGTAGTAGTTATACTT+CGG | 0.586867 | 7.3:+53888764 | MS.gene23219:CDS |
| GTGGAGGAAGATATTTGGAA+TGG | 0.589220 | 7.3:-53888549 | None:intergenic |
| AAAGTTTGGTGAGGTTTGCA+TGG | 0.589595 | 7.3:-53888508 | None:intergenic |
| TACTCACCGGGGAACCTCGA+CGG | 0.589903 | 7.3:+53888714 | MS.gene23219:CDS |
| GTCATGGCACACTGGTGTTG+AGG | 0.591700 | 7.3:-53888277 | None:intergenic |
| TTGATGTGCATGTTATGTAT+GGG | 0.591875 | 7.3:-53888368 | None:intergenic |
| TACCAAGTGAGACTACTTGA+GGG | 0.596440 | 7.3:-53888656 | None:intergenic |
| ATACCAAGTGAGACTACTTG+AGG | 0.598463 | 7.3:-53888657 | None:intergenic |
| GAGGAGATACAGAGTCCCAA+AGG | 0.600882 | 7.3:-53889016 | None:intergenic |
| GATCATGAAGAAGTTGAGGA+GGG | 0.601845 | 7.3:-53888229 | None:intergenic |
| ACAAACCCAATGAGTAGGAT+CGG | 0.610699 | 7.3:-53888811 | None:intergenic |
| CCCAATGAGTAGGATCGGTA+GGG | 0.618650 | 7.3:-53888806 | None:intergenic |
| ACGCCACAAACCCAATGAGT+AGG | 0.632533 | 7.3:-53888816 | None:intergenic |
| CCACATGTGTCATGGCACAC+TGG | 0.636762 | 7.3:-53888285 | None:intergenic |
| GCAGTGCAAGTAGACATGTA+GGG | 0.645279 | 7.3:-53888486 | None:intergenic |
| AAGAGTAAAGAGAAGCACAA+AGG | 0.652408 | 7.3:-53888632 | None:intergenic |
| AACGTACTGTTGTACATGGG+AGG | 0.655418 | 7.3:-53889038 | None:intergenic |
| GTACTGTTGTACATGGGAGG+AGG | 0.656054 | 7.3:-53889035 | None:intergenic |
| GTATTGAGCCACATGTGTCA+TGG | 0.676021 | 7.3:-53888293 | None:intergenic |
| TATGTATGGGTTGAATAGTG+GGG | 0.690061 | 7.3:-53888355 | None:intergenic |
| GTGGCATTGAAATATAGTCA+TGG | 0.693317 | 7.3:+53888837 | MS.gene23219:CDS |
| TTGGTGGAGATGCTAAGAGG+AGG | 0.695965 | 7.3:-53888251 | None:intergenic |
| ACTAGTTGTGAGAGTAGTGG+TGG | 0.700797 | 7.3:+53888891 | MS.gene23219:CDS |
| TGTACTAGTTGTGAGAGTAG+TGG | 0.707622 | 7.3:+53888888 | MS.gene23219:CDS |
| GGGGAACCTCGACGGCAACG+GGG | 0.708881 | 7.3:+53888722 | MS.gene23219:CDS |
| GTGCAAGTAGACATGTAGGG+TGG | 0.711373 | 7.3:-53888483 | None:intergenic |
| CATGTTGTGTATACTCACCG+GGG | 0.745636 | 7.3:+53888703 | MS.gene23219:CDS |
| CCAGTGTGCCATGACACATG+TGG | 0.747102 | 7.3:+53888285 | MS.gene23219:CDS |
| CAAACAAATCCACTTCCTGG+AGG | 0.785898 | 7.3:-53888930 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTCATTTTCATATATCATAT+AGG | + | chr7.3:53889471-53889490 | MS.gene23219:intron | 15.0% |
| !!! | TTTGTTGTTTCTTTTATTAT+TGG | + | chr7.3:53889073-53889092 | MS.gene23219:intron | 15.0% |
| !! | AAAAAGGAAAAATAAATGGT+TGG | + | chr7.3:53889588-53889607 | MS.gene23219:intron | 20.0% |
| !! | CAAGAAAAAGGAAAAATAAA+TGG | + | chr7.3:53889584-53889603 | MS.gene23219:intron | 20.0% |
| !! | GAGTATGTATAAGTAATTAA+GGG | + | chr7.3:53889493-53889512 | MS.gene23219:intron | 20.0% |
| ! | AAAAATAAATGGTTGGACAT+TGG | + | chr7.3:53889595-53889614 | MS.gene23219:intron | 25.0% |
| ! | AAAGAAACAACAAAAAGAGA+AGG | - | chr7.3:53889067-53889086 | None:intergenic | 25.0% |
| ! | ATAATAGTTACCCATTACTT+TGG | - | chr7.3:53889671-53889690 | None:intergenic | 25.0% |
| ! | GGAGTATGTATAAGTAATTA+AGG | + | chr7.3:53889492-53889511 | MS.gene23219:intron | 25.0% |
| ! | TATTATTCTGTACACTTGAA+AGG | + | chr7.3:53889685-53889704 | MS.gene23219:intron | 25.0% |
| ! | TGATTGTAGTAGTTATACTT+CGG | + | chr7.3:53888764-53888783 | MS.gene23219:CDS | 25.0% |
| ! | TGCAACATAAAGTAAACTTA+GGG | + | chr7.3:53889306-53889325 | MS.gene23219:intron | 25.0% |
| ! | TTGCAACATAAAGTAAACTT+AGG | + | chr7.3:53889305-53889324 | MS.gene23219:intron | 25.0% |
| !! | ATTTTCTGAGTACAAGAAAA+AGG | + | chr7.3:53889572-53889591 | MS.gene23219:intron | 25.0% |
| !! | GTTTCAAAAAGTTGTGATTT+TGG | + | chr7.3:53889121-53889140 | MS.gene23219:intron | 25.0% |
| !! | TAAAGGCTTAATTACACTTT+TGG | - | chr7.3:53889393-53889412 | None:intergenic | 25.0% |
| !!! | AAATGGTTGAACTTTTTTCT+TGG | - | chr7.3:53888593-53888612 | None:intergenic | 25.0% |
| !!! | ACAACTTTTTGAAACTTAAG+GGG | - | chr7.3:53889116-53889135 | None:intergenic | 25.0% |
| !!! | ATGAGAATGTTTGAGTTTTA+AGG | - | chr7.3:53888416-53888435 | None:intergenic | 25.0% |
| !!! | CACAACTTTTTGAAACTTAA+GGG | - | chr7.3:53889117-53889136 | None:intergenic | 25.0% |
| !!! | GAAAGAGTTGTTTTTTTTAG+GGG | + | chr7.3:53889335-53889354 | MS.gene23219:intron | 25.0% |
| !!! | GGAAAGAGTTGTTTTTTTTA+GGG | + | chr7.3:53889334-53889353 | MS.gene23219:intron | 25.0% |
| !!! | TACTTTTTGACTCGAAATTA+GGG | + | chr7.3:53889233-53889252 | MS.gene23219:intron | 25.0% |
| !!! | TCACAACTTTTTGAAACTTA+AGG | - | chr7.3:53889118-53889137 | None:intergenic | 25.0% |
| !!! | TGGAAAGAGTTGTTTTTTTA+GGG | - | chr7.3:53889149-53889168 | None:intergenic | 25.0% |
| !!! | TGGAAAGAGTTGTTTTTTTT+AGG | + | chr7.3:53889333-53889352 | MS.gene23219:intron | 25.0% |
| !!! | TTACTTTTTGACTCGAAATT+AGG | + | chr7.3:53889232-53889251 | MS.gene23219:intron | 25.0% |
| !!! | TTGGAAAGAGTTGTTTTTTT+AGG | - | chr7.3:53889351-53889332 | None:intergenic | 25.0% |
| !!! | TTTATATTGATTCTCTCTCT+TGG | + | chr7.3:53889731-53889750 | MS.gene23219:intron | 25.0% |
| AAAAAAGACCCGAAAACTAT+GGG | - | chr7.3:53889453-53889472 | None:intergenic | 30.0% | |
| AAAAACGTACTGTTGTACAT+GGG | - | chr7.3:53889044-53889063 | None:intergenic | 30.0% | |
| AAACCAATATGCCAAAGTAA+TGG | + | chr7.3:53889657-53889676 | MS.gene23219:intron | 30.0% | |
| AACCAATATGCCAAAGTAAT+GGG | + | chr7.3:53889658-53889677 | MS.gene23219:intron | 30.0% | |
| AGTCAAAAAGTAAACTTAGG+GGG | - | chr7.3:53889225-53889244 | None:intergenic | 30.0% | |
| CAACATAAAGTAAACTTAGG+GGG | + | chr7.3:53889308-53889327 | MS.gene23219:intron | 30.0% | |
| CGAGTCAAAAAGTAAACTTA+GGG | - | chr7.3:53889227-53889246 | None:intergenic | 30.0% | |
| GAAAGTAAACTTAGGAGATT+TGG | - | chr7.3:53889169-53889188 | None:intergenic | 30.0% | |
| GAGTCAAAAAGTAAACTTAG+GGG | - | chr7.3:53889226-53889245 | None:intergenic | 30.0% | |
| GCAACATAAAGTAAACTTAG+GGG | + | chr7.3:53889307-53889326 | MS.gene23219:intron | 30.0% | |
| TACATAACATGCACATCAAA+CGG | + | chr7.3:53888372-53888391 | MS.gene23219:CDS | 30.0% | |
| TATACACAACATGTGTTAGT+AGG | - | chr7.3:53888696-53888715 | None:intergenic | 30.0% | |
| TCGAGTCAAAAAGTAAACTT+AGG | - | chr7.3:53889228-53889247 | None:intergenic | 30.0% | |
| TGTATGAAATGGAGGTTATA+GGG | - | chr7.3:53888440-53888459 | None:intergenic | 30.0% | |
| TTGATGTGCATGTTATGTAT+GGG | - | chr7.3:53888371-53888390 | None:intergenic | 30.0% | |
| TTGCAACAGAAAGTAAACTT+AGG | - | chr7.3:53889177-53889196 | None:intergenic | 30.0% | |
| TTTGATGTGCATGTTATGTA+TGG | - | chr7.3:53888372-53888391 | None:intergenic | 30.0% | |
| TTTGTTTGTGTTTGTAAAGG+TGG | + | chr7.3:53888945-53888964 | MS.gene23219:CDS | 30.0% | |
| ! | ATACAAGTCAAGTATCCTTT+TGG | + | chr7.3:53888312-53888331 | MS.gene23219:CDS | 30.0% |
| ! | ATCACAACTTTGGGAAATTT+AGG | + | chr7.3:53889364-53889383 | MS.gene23219:intron | 30.0% |
| ! | ATTTCCCAAAGTTGTGATTT+TGG | - | chr7.3:53889362-53889381 | None:intergenic | 30.0% |
| ! | GGATTTGTTTGTGTTTGTAA+AGG | + | chr7.3:53888942-53888961 | MS.gene23219:CDS | 30.0% |
| ! | TCACAACTTTGGGAAATTTA+GGG | + | chr7.3:53889365-53889384 | MS.gene23219:intron | 30.0% |
| ! | TTATGTATGGGTTGAATAGT+GGG | - | chr7.3:53888359-53888378 | None:intergenic | 30.0% |
| ! | TTGAAATTCCCCATAGTTTT+CGG | + | chr7.3:53889441-53889460 | MS.gene23219:intron | 30.0% |
| !! | ACTTTTTGACTCGAAATTAG+GGG | + | chr7.3:53889234-53889253 | MS.gene23219:intron | 30.0% |
| !! | ATCAAAAGAAGTGTCACAAA+TGG | - | chr7.3:53888610-53888629 | None:intergenic | 30.0% |
| !!! | GAAAGAGTTGTTTTTTTAGG+GGG | - | chr7.3:53889147-53889166 | None:intergenic | 30.0% |
| !!! | GGAAAGAGTTGTTTTTTTAG+GGG | - | chr7.3:53889148-53889167 | None:intergenic | 30.0% |
| !!! | TTTGAGTTTTAAGGATGAGT+TGG | - | chr7.3:53888407-53888426 | None:intergenic | 30.0% |
| AAAAAGACCCGAAAACTATG+GGG | - | chr7.3:53889452-53889471 | None:intergenic | 35.0% | |
| ATCAAAACCAGGATTTCCTT+TGG | + | chr7.3:53889000-53889019 | MS.gene23219:CDS | 35.0% | |
| CTCACAACTAGTACATTTAG+TGG | - | chr7.3:53888883-53888902 | None:intergenic | 35.0% | |
| CTCTAATTACGATCAAAACC+AGG | + | chr7.3:53888989-53889008 | MS.gene23219:CDS | 35.0% | |
| CTGTTCTGTTATGAACAGTT+GGG | + | chr7.3:53889793-53889812 | MS.gene23219:intron | 35.0% | |
| GAAAAAAGACCCGAAAACTA+TGG | - | chr7.3:53889454-53889473 | None:intergenic | 35.0% | |
| GAAAAACGTACTGTTGTACA+TGG | - | chr7.3:53889045-53889064 | None:intergenic | 35.0% | |
| GATCGTAATTAGAGCAATCA+AGG | - | chr7.3:53888983-53889002 | None:intergenic | 35.0% | |
| GTGTATGAAATGGAGGTTAT+AGG | - | chr7.3:53888441-53888460 | None:intergenic | 35.0% | |
| GTGTTAGTAGGAGAAAAAAG+AGG | - | chr7.3:53888684-53888703 | None:intergenic | 35.0% | |
| GTTAAGTCTATGCCAAAGTT+TGG | - | chr7.3:53888525-53888544 | None:intergenic | 35.0% | |
| TACCCATTACTTTGGCATAT+TGG | - | chr7.3:53889663-53889682 | None:intergenic | 35.0% | |
| TCAAAACCAGGATTTCCTTT+GGG | + | chr7.3:53889001-53889020 | MS.gene23219:CDS | 35.0% | |
| TGAAAGTGGAGGAAGATATT+TGG | - | chr7.3:53888557-53888576 | None:intergenic | 35.0% | |
| ! | AAGAGTAAAGAGAAGCACAA+AGG | - | chr7.3:53888635-53888654 | None:intergenic | 35.0% |
| ! | ACAACTTTGGGAAATTTAGG+GGG | + | chr7.3:53889367-53889386 | MS.gene23219:intron | 35.0% |
| ! | CACAACTTTGGGAAATTTAG+GGG | + | chr7.3:53889366-53889385 | MS.gene23219:intron | 35.0% |
| ! | GTGGCATTGAAATATAGTCA+TGG | + | chr7.3:53888837-53888856 | MS.gene23219:CDS | 35.0% |
| ! | GTTATGTATGGGTTGAATAG+TGG | - | chr7.3:53888360-53888379 | None:intergenic | 35.0% |
| ! | TATGTATGGGTTGAATAGTG+GGG | - | chr7.3:53888358-53888377 | None:intergenic | 35.0% |
| ! | TGAAATTCCCCATAGTTTTC+GGG | + | chr7.3:53889442-53889461 | MS.gene23219:intron | 35.0% |
| !! | CTTTTTGACTCGAAATTAGG+GGG | + | chr7.3:53889235-53889254 | MS.gene23219:intron | 35.0% |
| !!! | AACTTTTTTCTTGGCAAGAG+AGG | - | chr7.3:53888584-53888603 | None:intergenic | 35.0% |
| ACAAACCCAATGAGTAGGAT+CGG | - | chr7.3:53888814-53888833 | None:intergenic | 40.0% | |
| ACACAAACAAATCCACTTCC+TGG | - | chr7.3:53888936-53888955 | None:intergenic | 40.0% | |
| ACATGTTGTGTATACTCACC+GGG | + | chr7.3:53888702-53888721 | MS.gene23219:CDS | 40.0% | |
| AGTGGAAGTGGTGTATGAAA+TGG | - | chr7.3:53888451-53888470 | None:intergenic | 40.0% | |
| ATACCAAGTGAGACTACTTG+AGG | - | chr7.3:53888660-53888679 | None:intergenic | 40.0% | |
| ATGCAAACCTCACCAAACTT+TGG | + | chr7.3:53888510-53888529 | MS.gene23219:CDS | 40.0% | |
| CACATGTTGTGTATACTCAC+CGG | + | chr7.3:53888701-53888720 | MS.gene23219:CDS | 40.0% | |
| CCAACTGTTCATAACAGAAC+AGG | - | chr7.3:53889795-53889814 | None:intergenic | 40.0% | |
| CCTGTTCTGTTATGAACAGT+TGG | + | chr7.3:53889792-53889811 | MS.gene23219:intron | 40.0% | |
| GAAAATGATACCAGCCAAGA+TGG | - | chr7.3:53889832-53889851 | None:intergenic | 40.0% | |
| GATCATGAAGAAGTTGAGGA+GGG | - | chr7.3:53888232-53888251 | None:intergenic | 40.0% | |
| GGGACCAAAATCACAACTTT+GGG | + | chr7.3:53889355-53889374 | MS.gene23219:intron | 40.0% | |
| GTAATTAGAGCAATCAAGGC+TGG | - | chr7.3:53888979-53888998 | None:intergenic | 40.0% | |
| GTGGAGGAAGATATTTGGAA+TGG | - | chr7.3:53888552-53888571 | None:intergenic | 40.0% | |
| TAAAGTAAACTTAGGGGGCT+TGG | + | chr7.3:53889313-53889332 | MS.gene23219:intron | 40.0% | |
| TACCAAGTGAGACTACTTGA+GGG | - | chr7.3:53888659-53888678 | None:intergenic | 40.0% | |
| TATGAACAGTTGGGAATGTC+TGG | + | chr7.3:53889802-53889821 | MS.gene23219:intron | 40.0% | |
| TGTACTAGTTGTGAGAGTAG+TGG | + | chr7.3:53888888-53888907 | MS.gene23219:CDS | 40.0% | |
| ! | AAAGTTTGGTGAGGTTTGCA+TGG | - | chr7.3:53888511-53888530 | None:intergenic | 40.0% |
| !!! | TTTTTTCTTGGCAAGAGAGG+AGG | - | chr7.3:53888581-53888600 | None:intergenic | 40.0% |
| AACGTACTGTTGTACATGGG+AGG | - | chr7.3:53889041-53889060 | None:intergenic | 45.0% | |
| ACTAGTTGTGAGAGTAGTGG+TGG | + | chr7.3:53888891-53888910 | MS.gene23219:CDS | 45.0% | |
| CAAACAAATCCACTTCCTGG+AGG | - | chr7.3:53888933-53888952 | None:intergenic | 45.0% | |
| CATGTTGTGTATACTCACCG+GGG | + | chr7.3:53888703-53888722 | MS.gene23219:CDS | 45.0% | |
| GAAAGAGGTGGTAGTAGTAG+TGG | - | chr7.3:53888207-53888226 | None:intergenic | 45.0% | |
| GATCCTACTCATTGGGTTTG+TGG | + | chr7.3:53888813-53888832 | MS.gene23219:CDS | 45.0% | |
| GCAGTGCAAGTAGACATGTA+GGG | - | chr7.3:53888489-53888508 | None:intergenic | 45.0% | |
| GCCTGCAAAGTAAACTTAGG+GGG | + | chr7.3:53889257-53889276 | MS.gene23219:intron | 45.0% | |
| GGAAGTGGTGTATGAAATGG+AGG | - | chr7.3:53888448-53888467 | None:intergenic | 45.0% | |
| GGAGGATCATGAAGAAGTTG+AGG | - | chr7.3:53888236-53888255 | None:intergenic | 45.0% | |
| GGATCATGAAGAAGTTGAGG+AGG | - | chr7.3:53888233-53888252 | None:intergenic | 45.0% | |
| GGCCTGCAAAGTAAACTTAG+GGG | + | chr7.3:53889256-53889275 | MS.gene23219:intron | 45.0% | |
| GGGCCTGCAAAGTAAACTTA+GGG | + | chr7.3:53889255-53889274 | MS.gene23219:intron | 45.0% | |
| GGGGACCAAAATCACAACTT+TGG | + | chr7.3:53889354-53889373 | MS.gene23219:intron | 45.0% | |
| GTATTGAGCCACATGTGTCA+TGG | - | chr7.3:53888296-53888315 | None:intergenic | 45.0% | |
| TGTGAGTATGAGAGTGGAAG+TGG | - | chr7.3:53888463-53888482 | None:intergenic | 45.0% | |
| ! | GAATGTCTGGAGTTCCATCT+TGG | + | chr7.3:53889815-53889834 | MS.gene23219:CDS | 45.0% |
| ! | GTCAAGTATCCTTTTGGCAC+AGG | + | chr7.3:53888318-53888337 | MS.gene23219:CDS | 45.0% |
| ! | GTCTATGCCAAAGTTTGGTG+AGG | - | chr7.3:53888520-53888539 | None:intergenic | 45.0% |
| !! | GTTGCAATTTTAGCCCCTCA+TGG | + | chr7.3:53889190-53889209 | MS.gene23219:intron | 45.0% |
| !! | GTTGCAATTTTAGCCCCTCA+TGG | - | chr7.3:53889209-53889190 | None:intergenic | 45.0% |
| !! | TAATTTATTCAAAATAATAA+AGG | - | chr7.3:53889410-53889429 | None:intergenic | 5.0% |
| AAGTTGAGGAGGGTGGAAAG+AGG | - | chr7.3:53888222-53888241 | None:intergenic | 50.0% | |
| ACCCAATGAGTAGGATCGGT+AGG | - | chr7.3:53888810-53888829 | None:intergenic | 50.0% | |
| ACCCTACCGATCCTACTCAT+TGG | + | chr7.3:53888805-53888824 | MS.gene23219:CDS | 50.0% | |
| ACGCCACAAACCCAATGAGT+AGG | - | chr7.3:53888819-53888838 | None:intergenic | 50.0% | |
| AGAGAGGAGGATGAAAGTGG+AGG | - | chr7.3:53888568-53888587 | None:intergenic | 50.0% | |
| AGGGGGCTAAAATTGCCATG+AGG | + | chr7.3:53889274-53889293 | MS.gene23219:intron | 50.0% | |
| AGGGGGCTAAAATTGCCATG+AGG | - | chr7.3:53889293-53889274 | None:intergenic | 50.0% | |
| CAGAGTCCCAAAGGAAATCC+TGG | - | chr7.3:53889010-53889029 | None:intergenic | 50.0% | |
| CATGAAGAAGTTGAGGAGGG+TGG | - | chr7.3:53888229-53888248 | None:intergenic | 50.0% | |
| CCCAATGAGTAGGATCGGTA+GGG | - | chr7.3:53888809-53888828 | None:intergenic | 50.0% | |
| CCCTACCGATCCTACTCATT+GGG | + | chr7.3:53888806-53888825 | MS.gene23219:CDS | 50.0% | |
| GAGGAGATACAGAGTCCCAA+AGG | - | chr7.3:53889019-53889038 | None:intergenic | 50.0% | |
| GCAAGAGAGGAGGATGAAAG+TGG | - | chr7.3:53888571-53888590 | None:intergenic | 50.0% | |
| GCCCCCTAAGTTTACTTTGC+AGG | - | chr7.3:53889261-53889280 | None:intergenic | 50.0% | |
| GGCAGTGCAAGTAGACATGT+AGG | - | chr7.3:53888490-53888509 | None:intergenic | 50.0% | |
| GGGGCCTGCAAAGTAAACTT+AGG | + | chr7.3:53889254-53889273 | MS.gene23219:intron | 50.0% | |
| GGGGCTAAAATTGCCATGAG+GGG | + | chr7.3:53889276-53889295 | MS.gene23219:intron | 50.0% | |
| GGGGCTAAAATTGCCATGAG+GGG | - | chr7.3:53889295-53889276 | None:intergenic | 50.0% | |
| GGGGGCTAAAATTGCCATGA+GGG | + | chr7.3:53889275-53889294 | MS.gene23219:intron | 50.0% | |
| GGGGGCTAAAATTGCCATGA+GGG | - | chr7.3:53889294-53889275 | None:intergenic | 50.0% | |
| GTACTGTTGTACATGGGAGG+AGG | - | chr7.3:53889038-53889057 | None:intergenic | 50.0% | |
| GTGCAAGTAGACATGTAGGG+TGG | - | chr7.3:53888486-53888505 | None:intergenic | 50.0% | |
| TACTCATTGGGTTTGTGGCG+TGG | + | chr7.3:53888818-53888837 | MS.gene23219:CDS | 50.0% | |
| TGCCCTCAAGTAGTCTCACT+TGG | + | chr7.3:53888654-53888673 | MS.gene23219:CDS | 50.0% | |
| TTGGTGGAGATGCTAAGAGG+AGG | - | chr7.3:53888254-53888273 | None:intergenic | 50.0% | |
| ! | CTGTTGGTGGAGATGCTAAG+AGG | - | chr7.3:53888257-53888276 | None:intergenic | 50.0% |
| ! | TATCCTTTTGGCACAGGTCC+TGG | + | chr7.3:53888324-53888343 | MS.gene23219:CDS | 50.0% |
| CAACCAGGACCTGTGCCAAA+AGG | - | chr7.3:53888330-53888349 | None:intergenic | 55.0% | |
| CCACATGTGTCATGGCACAC+TGG | - | chr7.3:53888288-53888307 | None:intergenic | 55.0% | |
| CCAGTGTGCCATGACACATG+TGG | + | chr7.3:53888285-53888304 | MS.gene23219:CDS | 55.0% | |
| GGGTGGTGTGAGTATGAGAG+TGG | - | chr7.3:53888469-53888488 | None:intergenic | 55.0% | |
| TTGAGGAGGGTGGAAAGAGG+TGG | - | chr7.3:53888219-53888238 | None:intergenic | 55.0% | |
| TTTGGCACAGGTCCTGGTTG+CGG | + | chr7.3:53888330-53888349 | MS.gene23219:CDS | 55.0% | |
| ! | AATAGTGGGGATCCGCAACC+AGG | - | chr7.3:53888345-53888364 | None:intergenic | 55.0% |
| ! | ACTGGTGTTGAGGCTGTTGG+TGG | - | chr7.3:53888270-53888289 | None:intergenic | 55.0% |
| ! | CACACTGGTGTTGAGGCTGT+TGG | - | chr7.3:53888273-53888292 | None:intergenic | 55.0% |
| ! | GAGAGTAGTGGTGGTGTGTG+TGG | + | chr7.3:53888900-53888919 | MS.gene23219:CDS | 55.0% |
| ! | GTCATGGCACACTGGTGTTG+AGG | - | chr7.3:53888280-53888299 | None:intergenic | 55.0% |
| ! | GTCTGGAGTTCCATCTTGGC+TGG | + | chr7.3:53889819-53889838 | MS.gene23219:CDS | 55.0% |
| GGATACGCTCCTCCAGGAAG+TGG | + | chr7.3:53888921-53888940 | MS.gene23219:CDS | 60.0% | |
| GTGTGTGGATACGCTCCTCC+AGG | + | chr7.3:53888915-53888934 | MS.gene23219:CDS | 60.0% | |
| TACTCACCGGGGAACCTCGA+CGG | + | chr7.3:53888714-53888733 | MS.gene23219:CDS | 60.0% | |
| TCAAGTCCCCGTTGCCGTCG+AGG | - | chr7.3:53888731-53888750 | None:intergenic | 65.0% | |
| CCGGGGAACCTCGACGGCAA+CGG | + | chr7.3:53888720-53888739 | MS.gene23219:CDS | 70.0% | |
| CCGTTGCCGTCGAGGTTCCC+CGG | - | chr7.3:53888723-53888742 | None:intergenic | 70.0% | |
| CGGGGAACCTCGACGGCAAC+GGG | + | chr7.3:53888721-53888740 | MS.gene23219:CDS | 70.0% | |
| GGGGAACCTCGACGGCAACG+GGG | + | chr7.3:53888722-53888741 | MS.gene23219:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 53888195 | 53889863 | 53888195 | ID=MS.gene23219 |
| chr7.3 | mRNA | 53888195 | 53889863 | 53888195 | ID=MS.gene23219.t1;Parent=MS.gene23219 |
| chr7.3 | exon | 53888195 | 53889053 | 53888195 | ID=MS.gene23219.t1.exon1;Parent=MS.gene23219.t1 |
| chr7.3 | CDS | 53888195 | 53889053 | 53888195 | ID=cds.MS.gene23219.t1;Parent=MS.gene23219.t1 |
| chr7.3 | exon | 53889811 | 53889863 | 53889811 | ID=MS.gene23219.t1.exon2;Parent=MS.gene23219.t1 |
| chr7.3 | CDS | 53889811 | 53889863 | 53889811 | ID=cds.MS.gene23219.t1;Parent=MS.gene23219.t1 |
| Gene Sequence |
| Protein sequence |
