Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30689.t1 | XP_013452216.1 | 88.5 | 312 | 31 | 2 | 1 | 312 | 112 | 418 | 3.10E-164 | 587.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30689.t1 | A0A072U8X8 | 88.5 | 312 | 31 | 2 | 1 | 312 | 112 | 418 | 2.2e-164 | 587.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene30689 | 0.845002 | 5.33E-59 | -1.69E-46 |
| MS.gene049151 | MS.gene30689 | 0.817112 | 3.90E-52 | -1.69E-46 |
| MS.gene049153 | MS.gene30689 | 0.838229 | 3.25E-57 | -1.69E-46 |
| MS.gene049260 | MS.gene30689 | 0.813849 | 2.08E-51 | -1.69E-46 |
| MS.gene049346 | MS.gene30689 | 0.815424 | 9.31E-52 | -1.69E-46 |
| MS.gene049378 | MS.gene30689 | 0.826871 | 2.14E-54 | -1.69E-46 |
| MS.gene049599 | MS.gene30689 | -0.810102 | 1.36E-50 | -1.69E-46 |
| MS.gene049758 | MS.gene30689 | 0.862051 | 6.66E-64 | -1.69E-46 |
| MS.gene049910 | MS.gene30689 | 0.853866 | 1.80E-61 | -1.69E-46 |
| MS.gene050128 | MS.gene30689 | 0.822817 | 1.93E-53 | -1.69E-46 |
| MS.gene050226 | MS.gene30689 | 0.832513 | 9.05E-56 | -1.69E-46 |
| MS.gene050227 | MS.gene30689 | 0.832571 | 8.76E-56 | -1.69E-46 |
| MS.gene050228 | MS.gene30689 | 0.828096 | 1.09E-54 | -1.69E-46 |
| MS.gene050301 | MS.gene30689 | 0.844908 | 5.65E-59 | -1.69E-46 |
| MS.gene050397 | MS.gene30689 | 0.831749 | 1.40E-55 | -1.69E-46 |
| MS.gene050426 | MS.gene30689 | -0.808586 | 2.88E-50 | -1.69E-46 |
| MS.gene050464 | MS.gene30689 | 0.802156 | 6.41E-49 | -1.69E-46 |
| MS.gene050529 | MS.gene30689 | 0.802843 | 4.63E-49 | -1.69E-46 |
| MS.gene050623 | MS.gene30689 | -0.830847 | 2.33E-55 | -1.69E-46 |
| MS.gene050642 | MS.gene30689 | 0.829409 | 5.23E-55 | -1.69E-46 |
| MS.gene050762 | MS.gene30689 | 0.816635 | 5.00E-52 | -1.69E-46 |
| MS.gene050763 | MS.gene30689 | 0.819826 | 9.47E-53 | -1.69E-46 |
| MS.gene050787 | MS.gene30689 | 0.804098 | 2.54E-49 | -1.69E-46 |
| MS.gene050971 | MS.gene30689 | 0.83519 | 1.94E-56 | -1.69E-46 |
| MS.gene05119 | MS.gene30689 | -0.848842 | 4.74E-60 | -1.69E-46 |
| MS.gene051860 | MS.gene30689 | 0.877074 | 8.41E-69 | -1.69E-46 |
| MS.gene051983 | MS.gene30689 | 0.853646 | 2.08E-61 | -1.69E-46 |
| MS.gene052011 | MS.gene30689 | -0.836018 | 1.20E-56 | -1.69E-46 |
| MS.gene052077 | MS.gene30689 | 0.862634 | 4.41E-64 | -1.69E-46 |
| MS.gene052178 | MS.gene30689 | 0.817358 | 3.44E-52 | -1.69E-46 |
| MS.gene052188 | MS.gene30689 | 0.831151 | 1.96E-55 | -1.69E-46 |
| MS.gene052253 | MS.gene30689 | 0.865186 | 7.09E-65 | -1.69E-46 |
| MS.gene052255 | MS.gene30689 | 0.812864 | 3.42E-51 | -1.69E-46 |
| MS.gene052340 | MS.gene30689 | 0.85147 | 8.69E-61 | -1.69E-46 |
| MS.gene053073 | MS.gene30689 | 0.807318 | 5.36E-50 | -1.69E-46 |
| MS.gene05316 | MS.gene30689 | 0.842547 | 2.42E-58 | -1.69E-46 |
| MS.gene053184 | MS.gene30689 | 0.806929 | 6.48E-50 | -1.69E-46 |
| MS.gene053209 | MS.gene30689 | 0.805312 | 1.42E-49 | -1.69E-46 |
| MS.gene053557 | MS.gene30689 | 0.830058 | 3.64E-55 | -1.69E-46 |
| MS.gene053836 | MS.gene30689 | 0.884801 | 1.41E-71 | -1.69E-46 |
| MS.gene054010 | MS.gene30689 | 0.809667 | 1.69E-50 | -1.69E-46 |
| MS.gene054011 | MS.gene30689 | 0.833286 | 5.82E-56 | -1.69E-46 |
| MS.gene054012 | MS.gene30689 | 0.816913 | 4.33E-52 | -1.69E-46 |
| MS.gene054013 | MS.gene30689 | 0.810297 | 1.24E-50 | -1.69E-46 |
| MS.gene054183 | MS.gene30689 | 0.84509 | 5.04E-59 | -1.69E-46 |
| MS.gene054184 | MS.gene30689 | 0.81403 | 1.90E-51 | -1.69E-46 |
| MS.gene054185 | MS.gene30689 | 0.813811 | 2.12E-51 | -1.69E-46 |
| MS.gene054379 | MS.gene30689 | 0.825478 | 4.59E-54 | -1.69E-46 |
| MS.gene054473 | MS.gene30689 | 0.852719 | 3.84E-61 | -1.69E-46 |
| MS.gene054542 | MS.gene30689 | 0.829251 | 5.71E-55 | -1.69E-46 |
| MS.gene054918 | MS.gene30689 | 0.818039 | 2.41E-52 | -1.69E-46 |
| MS.gene054930 | MS.gene30689 | 0.834629 | 2.68E-56 | -1.69E-46 |
| MS.gene054983 | MS.gene30689 | 0.803446 | 3.47E-49 | -1.69E-46 |
| MS.gene055116 | MS.gene30689 | 0.832411 | 9.60E-56 | -1.69E-46 |
| MS.gene055277 | MS.gene30689 | 0.851061 | 1.13E-60 | -1.69E-46 |
| MS.gene055358 | MS.gene30689 | 0.801466 | 8.89E-49 | -1.69E-46 |
| MS.gene055422 | MS.gene30689 | 0.852028 | 6.04E-61 | -1.69E-46 |
| MS.gene055428 | MS.gene30689 | 0.828646 | 8.01E-55 | -1.69E-46 |
| MS.gene05553 | MS.gene30689 | 0.829669 | 4.52E-55 | -1.69E-46 |
| MS.gene055604 | MS.gene30689 | 0.829357 | 5.39E-55 | -1.69E-46 |
| MS.gene055666 | MS.gene30689 | 0.811223 | 7.80E-51 | -1.69E-46 |
| MS.gene055859 | MS.gene30689 | 0.820575 | 6.38E-53 | -1.69E-46 |
| MS.gene056191 | MS.gene30689 | 0.820184 | 7.84E-53 | -1.69E-46 |
| MS.gene056447 | MS.gene30689 | 0.815179 | 1.06E-51 | -1.69E-46 |
| MS.gene056612 | MS.gene30689 | 0.812014 | 5.25E-51 | -1.69E-46 |
| MS.gene056659 | MS.gene30689 | 0.816484 | 5.40E-52 | -1.69E-46 |
| MS.gene056723 | MS.gene30689 | 0.805206 | 1.49E-49 | -1.69E-46 |
| MS.gene056899 | MS.gene30689 | -0.830101 | 3.55E-55 | -1.69E-46 |
| MS.gene056979 | MS.gene30689 | 0.863736 | 2.01E-64 | -1.69E-46 |
| MS.gene05702 | MS.gene30689 | 0.854135 | 1.51E-61 | -1.69E-46 |
| MS.gene057121 | MS.gene30689 | 0.808041 | 3.76E-50 | -1.69E-46 |
| MS.gene057245 | MS.gene30689 | 0.801883 | 7.30E-49 | -1.69E-46 |
| MS.gene057396 | MS.gene30689 | 0.806967 | 6.36E-50 | -1.69E-46 |
| MS.gene057448 | MS.gene30689 | 0.834767 | 2.48E-56 | -1.69E-46 |
| MS.gene057449 | MS.gene30689 | 0.834372 | 3.11E-56 | -1.69E-46 |
| MS.gene057450 | MS.gene30689 | 0.835922 | 1.27E-56 | -1.69E-46 |
| MS.gene057469 | MS.gene30689 | 0.832902 | 7.25E-56 | -1.69E-46 |
| MS.gene057750 | MS.gene30689 | 0.802353 | 5.84E-49 | -1.69E-46 |
| MS.gene057754 | MS.gene30689 | 0.800534 | 1.38E-48 | -1.69E-46 |
| MS.gene058002 | MS.gene30689 | 0.836921 | 7.05E-57 | -1.69E-46 |
| MS.gene05811 | MS.gene30689 | 0.848369 | 6.41E-60 | -1.69E-46 |
| MS.gene058142 | MS.gene30689 | 0.826092 | 3.28E-54 | -1.69E-46 |
| MS.gene05842 | MS.gene30689 | 0.823506 | 1.34E-53 | -1.69E-46 |
| MS.gene058435 | MS.gene30689 | 0.814933 | 1.20E-51 | -1.69E-46 |
| MS.gene058710 | MS.gene30689 | 0.826173 | 3.14E-54 | -1.69E-46 |
| MS.gene058845 | MS.gene30689 | 0.803677 | 3.11E-49 | -1.69E-46 |
| MS.gene05886 | MS.gene30689 | 0.855585 | 5.72E-62 | -1.69E-46 |
| MS.gene058928 | MS.gene30689 | 0.826944 | 2.05E-54 | -1.69E-46 |
| MS.gene05907 | MS.gene30689 | 0.856343 | 3.43E-62 | -1.69E-46 |
| MS.gene059285 | MS.gene30689 | 0.851198 | 1.04E-60 | -1.69E-46 |
| MS.gene059294 | MS.gene30689 | 0.823107 | 1.65E-53 | -1.69E-46 |
| MS.gene059420 | MS.gene30689 | 0.843438 | 1.40E-58 | -1.69E-46 |
| MS.gene059421 | MS.gene30689 | 0.815007 | 1.15E-51 | -1.69E-46 |
| MS.gene059518 | MS.gene30689 | 0.822475 | 2.32E-53 | -1.69E-46 |
| MS.gene059597 | MS.gene30689 | 0.819474 | 1.14E-52 | -1.69E-46 |
| MS.gene059688 | MS.gene30689 | 0.813336 | 2.70E-51 | -1.69E-46 |
| MS.gene059692 | MS.gene30689 | 0.811759 | 5.96E-51 | -1.69E-46 |
| MS.gene059695 | MS.gene30689 | 0.805071 | 1.59E-49 | -1.69E-46 |
| MS.gene05984 | MS.gene30689 | 0.858952 | 5.78E-63 | -1.69E-46 |
| MS.gene059894 | MS.gene30689 | 0.853663 | 2.06E-61 | -1.69E-46 |
| MS.gene060247 | MS.gene30689 | 0.801327 | 9.49E-49 | -1.69E-46 |
| MS.gene06037 | MS.gene30689 | 0.83002 | 3.71E-55 | -1.69E-46 |
| MS.gene060495 | MS.gene30689 | 0.813846 | 2.08E-51 | -1.69E-46 |
| MS.gene060986 | MS.gene30689 | 0.810607 | 1.06E-50 | -1.69E-46 |
| MS.gene061049 | MS.gene30689 | 0.876862 | 9.96E-69 | -1.69E-46 |
| MS.gene061051 | MS.gene30689 | -0.803166 | 3.97E-49 | -1.69E-46 |
| MS.gene061114 | MS.gene30689 | -0.806429 | 8.26E-50 | -1.69E-46 |
| MS.gene061159 | MS.gene30689 | 0.858032 | 1.09E-62 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30689.t1 | MTR_6g048350 | 86.520 | 319 | 42 | 1 | 1 | 319 | 114 | 431 | 0.0 | 577 |
| MS.gene30689.t1 | MTR_6g048310 | 88.179 | 313 | 32 | 2 | 1 | 313 | 112 | 419 | 0.0 | 572 |
| MS.gene30689.t1 | MTR_4g094560 | 83.912 | 317 | 50 | 1 | 3 | 319 | 106 | 421 | 0.0 | 562 |
| MS.gene30689.t1 | MTR_4g094548 | 83.912 | 317 | 49 | 2 | 1 | 316 | 115 | 430 | 0.0 | 558 |
| MS.gene30689.t1 | MTR_4g094555 | 83.067 | 313 | 52 | 1 | 1 | 313 | 114 | 425 | 0.0 | 549 |
| MS.gene30689.t1 | MTR_4g094570 | 81.789 | 313 | 56 | 1 | 1 | 313 | 114 | 425 | 0.0 | 549 |
| MS.gene30689.t1 | MTR_4g094550 | 79.872 | 313 | 62 | 1 | 1 | 313 | 115 | 426 | 0.0 | 533 |
| MS.gene30689.t1 | MTR_4g094562 | 80.831 | 313 | 51 | 1 | 1 | 313 | 114 | 417 | 0.0 | 532 |
| MS.gene30689.t1 | MTR_0083s0100 | 66.777 | 301 | 99 | 1 | 3 | 302 | 111 | 411 | 1.11e-153 | 437 |
| MS.gene30689.t1 | MTR_1g052640 | 65.886 | 299 | 101 | 1 | 5 | 302 | 113 | 411 | 2.43e-153 | 436 |
| MS.gene30689.t1 | MTR_2g030460 | 63.000 | 300 | 110 | 1 | 5 | 303 | 113 | 412 | 9.41e-149 | 424 |
| MS.gene30689.t1 | MTR_2g030470 | 65.789 | 304 | 103 | 1 | 8 | 310 | 119 | 422 | 3.74e-148 | 437 |
| MS.gene30689.t1 | MTR_2g030470 | 64.164 | 293 | 105 | 0 | 7 | 299 | 530 | 822 | 8.57e-142 | 421 |
| MS.gene30689.t1 | MTR_2g030480 | 62.116 | 293 | 91 | 1 | 8 | 300 | 116 | 388 | 5.83e-136 | 391 |
| MS.gene30689.t1 | MTR_4g094565 | 60.883 | 317 | 70 | 4 | 1 | 317 | 86 | 348 | 4.01e-127 | 367 |
| MS.gene30689.t1 | MTR_1g052640 | 63.964 | 222 | 79 | 1 | 5 | 225 | 113 | 334 | 4.82e-107 | 316 |
| MS.gene30689.t1 | MTR_2g030460 | 61.261 | 222 | 85 | 1 | 5 | 225 | 113 | 334 | 1.08e-106 | 315 |
| MS.gene30689.t1 | MTR_4g094565 | 80.347 | 173 | 34 | 0 | 1 | 173 | 86 | 258 | 1.21e-103 | 306 |
| MS.gene30689.t1 | MTR_4g094562 | 78.613 | 173 | 37 | 0 | 1 | 173 | 114 | 286 | 4.55e-102 | 303 |
| MS.gene30689.t1 | MTR_8g039300 | 47.635 | 296 | 137 | 5 | 11 | 299 | 122 | 406 | 2.36e-99 | 299 |
| MS.gene30689.t1 | MTR_6g089930 | 45.302 | 298 | 145 | 5 | 11 | 301 | 122 | 408 | 2.24e-97 | 294 |
| MS.gene30689.t1 | MTR_3g035040 | 46.309 | 298 | 142 | 6 | 11 | 301 | 122 | 408 | 2.95e-95 | 288 |
| MS.gene30689.t1 | MTR_6g090090 | 46.801 | 297 | 130 | 6 | 11 | 300 | 148 | 423 | 1.04e-93 | 285 |
| MS.gene30689.t1 | MTR_1g052640 | 64.327 | 171 | 60 | 1 | 5 | 174 | 113 | 283 | 2.61e-81 | 249 |
| MS.gene30689.t1 | MTR_1g035220 | 43.382 | 272 | 114 | 6 | 8 | 271 | 119 | 358 | 1.24e-77 | 241 |
| MS.gene30689.t1 | MTR_1g062750 | 44.828 | 174 | 85 | 3 | 8 | 174 | 65 | 234 | 5.54e-53 | 174 |
| MS.gene30689.t1 | MTR_3g010150 | 58.537 | 41 | 17 | 0 | 12 | 52 | 14 | 54 | 4.18e-12 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30689.t1 | AT5G61820 | 60.201 | 299 | 110 | 5 | 3 | 299 | 128 | 419 | 3.16e-127 | 372 |
| MS.gene30689.t1 | AT5G61820 | 60.201 | 299 | 110 | 5 | 3 | 299 | 128 | 419 | 3.16e-127 | 372 |
Find 78 sgRNAs with CRISPR-Local
Find 150 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTTATAATCTGGCCTTAA+AGG | 0.090484 | 6.3:-43419150 | None:intergenic |
| ATAAATACGGAAGGCCTTTA+AGG | 0.292905 | 6.3:+43419136 | MS.gene30689:CDS |
| ACCGATATTCCGGATCCTTT+TGG | 0.306453 | 6.3:+43418970 | MS.gene30689:CDS |
| CACTTCTCCTCAAACCCTTC+TGG | 0.309846 | 6.3:-43419021 | None:intergenic |
| CTTCCACAGTATTTCGGCCT+TGG | 0.317956 | 6.3:+43418925 | MS.gene30689:CDS |
| GATATTCTTCCACAGTATTT+CGG | 0.321443 | 6.3:+43418919 | MS.gene30689:CDS |
| CATCAACATTCAGGTGGAAT+TGG | 0.323134 | 6.3:+43419874 | MS.gene30689:CDS |
| GGAATTGGATCAACTCTATA+TGG | 0.325668 | 6.3:+43419889 | MS.gene30689:CDS |
| ATTCCAATCAATCCATTTCA+TGG | 0.333997 | 6.3:-43419259 | None:intergenic |
| CATTACTCCAGCGTGCTCTT+TGG | 0.337450 | 6.3:-43420734 | None:intergenic |
| AGGAACACCGACCGATATTC+CGG | 0.343821 | 6.3:+43418960 | MS.gene30689:CDS |
| GCTGTTGCTCATCAACATTC+AGG | 0.362382 | 6.3:+43419865 | MS.gene30689:CDS |
| TGTTCTTCTGTACCAAGTTA+TGG | 0.376638 | 6.3:+43420586 | MS.gene30689:CDS |
| TCAATTATGTATGCCTTAAC+AGG | 0.376750 | 6.3:-43419294 | None:intergenic |
| ACACCATGAAATGGATTGAT+TGG | 0.377970 | 6.3:+43419256 | MS.gene30689:CDS |
| ATCTTGACAGAACCTGGTTT+AGG | 0.385522 | 6.3:-43420667 | None:intergenic |
| TCTGTACCAAGTTATGGAAA+TGG | 0.387198 | 6.3:+43420592 | MS.gene30689:CDS |
| CGTGGCGTAGAGGATAAGTT+AGG | 0.399286 | 6.3:+43419072 | MS.gene30689:CDS |
| AAAGAGCACGCTGGAGTAAT+GGG | 0.401347 | 6.3:+43420736 | MS.gene30689:CDS |
| AACAAACCTCCTTTATAATC+TGG | 0.406826 | 6.3:-43419159 | None:intergenic |
| TTTAGGTAGAGACTTCTCTT+TGG | 0.407405 | 6.3:-43419231 | None:intergenic |
| ACCAAAAGGATCCGGAATAT+CGG | 0.410505 | 6.3:-43418971 | None:intergenic |
| CCTTTAAGGCCAGATTATAA+AGG | 0.413541 | 6.3:+43419150 | MS.gene30689:CDS |
| ACCTAAAATACACCATGAAA+TGG | 0.414273 | 6.3:+43419247 | MS.gene30689:CDS |
| CAAAGAGCACGCTGGAGTAA+TGG | 0.415640 | 6.3:+43420735 | MS.gene30689:CDS |
| AACCCTTCTGGAATTTCTGC+AGG | 0.415755 | 6.3:-43419009 | None:intergenic |
| TCATTTCCATTTCCATAACT+TGG | 0.428866 | 6.3:-43420598 | None:intergenic |
| AAACTATCAAATGATTCAAA+AGG | 0.443829 | 6.3:+43419333 | MS.gene30689:CDS |
| GAACTTAGATCATGATTGTA+AGG | 0.453756 | 6.3:+43419359 | MS.gene30689:CDS |
| ATCTCTATACCAAAAGGATC+CGG | 0.470682 | 6.3:-43418979 | None:intergenic |
| ACAAGTCTCCCACTACAAAC+TGG | 0.475191 | 6.3:+43419826 | MS.gene30689:CDS |
| AATGAGGCAGGGTACATTGT+AGG | 0.477299 | 6.3:+43420628 | MS.gene30689:CDS |
| GGAGTTGTTCTGCCACCAAT+AGG | 0.477987 | 6.3:-43420768 | None:intergenic |
| GTCTCAATTGTTGTTGGTAT+GGG | 0.482130 | 6.3:-43420789 | None:intergenic |
| TGTCTCAATTGTTGTTGGTA+TGG | 0.484776 | 6.3:-43420790 | None:intergenic |
| TATGGAAATGGAAATGAAGC+AGG | 0.486895 | 6.3:+43420604 | MS.gene30689:CDS |
| AATGTAACAGTGGATAAATA+CGG | 0.491702 | 6.3:+43419123 | MS.gene30689:CDS |
| TAGAATGTCTCAATTGTTGT+TGG | 0.491837 | 6.3:-43420795 | None:intergenic |
| TCATTTATCTTGACAGAACC+TGG | 0.494580 | 6.3:-43420673 | None:intergenic |
| AGAAATTCCAGAAGGGTTTG+AGG | 0.495743 | 6.3:+43419014 | MS.gene30689:CDS |
| TGATACACAATGCAAGTTGA+AGG | 0.497442 | 6.3:+43419194 | MS.gene30689:CDS |
| CAGAAGGGTTTGAGGAGAAG+TGG | 0.504990 | 6.3:+43419022 | MS.gene30689:CDS |
| ACTCTAATTATGTTCTCGTA+AGG | 0.520161 | 6.3:+43418875 | MS.gene30689:CDS |
| TTACCTATCTCTATACCAAA+AGG | 0.520347 | 6.3:-43418985 | None:intergenic |
| AATGAAGCAGGAAATGAGGC+AGG | 0.526123 | 6.3:+43420616 | MS.gene30689:CDS |
| CACAATCATTTCCCTCATCA+TGG | 0.527001 | 6.3:-43419789 | None:intergenic |
| ACTGTGGAAGAATATCTGCC+TGG | 0.527321 | 6.3:-43418912 | None:intergenic |
| TGGATCAACTCTATATGGAC+AGG | 0.542632 | 6.3:+43419894 | MS.gene30689:CDS |
| TTCCTCGTGTTTCAGATCCA+AGG | 0.550449 | 6.3:-43418942 | None:intergenic |
| AAGGAACGATGGCATATGCC+AGG | 0.552471 | 6.3:+43418894 | MS.gene30689:CDS |
| AGCAATATGTGAATTATACA+TGG | 0.559476 | 6.3:+43420948 | MS.gene30689:CDS |
| GGTTCTGTCAAGATAAATGA+TGG | 0.568462 | 6.3:+43420676 | MS.gene30689:CDS |
| TGGAAATGAAGCAGGAAATG+AGG | 0.569506 | 6.3:+43420612 | MS.gene30689:CDS |
| ACACAATGCAAGTTGAAGGA+AGG | 0.583684 | 6.3:+43419198 | MS.gene30689:CDS |
| TTAAGGCCAGATTATAAAGG+AGG | 0.583925 | 6.3:+43419153 | MS.gene30689:CDS |
| TATCGATACGCGTGGCGTAG+AGG | 0.604872 | 6.3:+43419062 | MS.gene30689:CDS |
| GTGGCGTAGAGGATAAGTTA+GGG | 0.607027 | 6.3:+43419073 | MS.gene30689:CDS |
| TCTACTTGTTATCCTAAACC+AGG | 0.611987 | 6.3:+43420655 | MS.gene30689:CDS |
| CATAACCACCAGTTTGTAGT+GGG | 0.617808 | 6.3:-43419834 | None:intergenic |
| ACATAACCACCAGTTTGTAG+TGG | 0.621224 | 6.3:-43419835 | None:intergenic |
| TATAAGTGCAGTTTCATCGA+TGG | 0.623485 | 6.3:+43420919 | MS.gene30689:intron |
| ATGATTGTGTTCATGTGAAG+AGG | 0.628744 | 6.3:+43419803 | MS.gene30689:CDS |
| TATGTTCTCGTAAGGAACGA+TGG | 0.639808 | 6.3:+43418883 | MS.gene30689:CDS |
| AACAACACCAAAGAGCACGC+TGG | 0.641398 | 6.3:+43420727 | MS.gene30689:CDS |
| TTGTAGCACAGACCATGATG+AGG | 0.644465 | 6.3:+43419777 | MS.gene30689:CDS |
| TAACAGTGGATAAATACGGA+AGG | 0.645572 | 6.3:+43419127 | MS.gene30689:CDS |
| TGTAGCACAGACCATGATGA+GGG | 0.648137 | 6.3:+43419778 | MS.gene30689:CDS |
| AATCCTGCAGAAATTCCAGA+AGG | 0.652001 | 6.3:+43419006 | MS.gene30689:CDS |
| GTTGCTCATCAACATTCAGG+TGG | 0.652296 | 6.3:+43419868 | MS.gene30689:CDS |
| GATCCAAGGCCGAAATACTG+TGG | 0.655744 | 6.3:-43418928 | None:intergenic |
| GGCCTTGGATCTGAAACACG+AGG | 0.667596 | 6.3:+43418940 | MS.gene30689:CDS |
| TGAGCTTTATAATGTAACAG+TGG | 0.676658 | 6.3:+43419113 | MS.gene30689:CDS |
| AAAGGATCCGGAATATCGGT+CGG | 0.677904 | 6.3:-43418967 | None:intergenic |
| ATCCTGCAGAAATTCCAGAA+GGG | 0.682882 | 6.3:+43419007 | MS.gene30689:CDS |
| ATTCATGCTATCGATACGCG+TGG | 0.690800 | 6.3:+43419054 | MS.gene30689:CDS |
| ATGAAGCAGGAAATGAGGCA+GGG | 0.694137 | 6.3:+43420617 | MS.gene30689:CDS |
| AATATGTGAATTATACATGG+AGG | 0.703555 | 6.3:+43420951 | MS.gene30689:CDS |
| AGTCTCCCACTACAAACTGG+TGG | 0.704944 | 6.3:+43419829 | MS.gene30689:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAGATAATTAGTATTATATA+TGG | + | chr6.3:43420857-43420876 | MS.gene30689:intron | 10.0% |
| !! | AAGAAAAAAAGAAACATATA+TGG | + | chr6.3:43420893-43420912 | MS.gene30689:intron | 15.0% |
| !!! | TGTTTTAATTAACAAGAAAA+TGG | + | chr6.3:43420202-43420221 | MS.gene30689:intron | 15.0% |
| !! | AAAAAAAGAAACATATATGG+TGG | + | chr6.3:43420896-43420915 | MS.gene30689:intron | 20.0% |
| !! | AAACTATCAAATGATTCAAA+AGG | + | chr6.3:43419333-43419352 | MS.gene30689:CDS | 20.0% |
| !! | AATTTGCAATAGTTACATAT+AGG | + | chr6.3:43419918-43419937 | MS.gene30689:intron | 20.0% |
| !! | ATTAAAACATTTATTACCCT+CGG | - | chr6.3:43420191-43420210 | None:intergenic | 20.0% |
| !!! | TTTGTTTAAAACTGTAATCA+TGG | + | chr6.3:43419965-43419984 | MS.gene30689:intron | 20.0% |
| ! | AATATGTGAATTATACATGG+AGG | + | chr6.3:43420951-43420970 | MS.gene30689:CDS | 25.0% |
| ! | AATGTAACAGTGGATAAATA+CGG | + | chr6.3:43419123-43419142 | MS.gene30689:CDS | 25.0% |
| ! | AGCAATATGTGAATTATACA+TGG | + | chr6.3:43420948-43420967 | MS.gene30689:CDS | 25.0% |
| ! | CATTAGACCAATAGTAAATA+AGG | + | chr6.3:43420375-43420394 | MS.gene30689:intron | 25.0% |
| ! | TAAATCCAAAATATCGAGTT+TGG | + | chr6.3:43419524-43419543 | MS.gene30689:intron | 25.0% |
| ! | TTAAAACTGTAATCATGGAA+GGG | + | chr6.3:43419970-43419989 | MS.gene30689:intron | 25.0% |
| !! | AAAATCATGATTTTGTGCTA+GGG | + | chr6.3:43420110-43420129 | MS.gene30689:intron | 25.0% |
| !! | GATTGATTGGAATGATTTTA+TGG | + | chr6.3:43419269-43419288 | MS.gene30689:CDS | 25.0% |
| !! | TGTGAATTATGTATGTTTTC+AGG | + | chr6.3:43420549-43420568 | MS.gene30689:intron | 25.0% |
| !! | TTAATCCAAACTCGATATTT+TGG | - | chr6.3:43419532-43419551 | None:intergenic | 25.0% |
| !! | TTTAAAACTGTAATCATGGA+AGG | + | chr6.3:43419969-43419988 | MS.gene30689:intron | 25.0% |
| !!! | AAACTAGCCTTATTTACTAT+TGG | - | chr6.3:43420385-43420404 | None:intergenic | 25.0% |
| !!! | AATTATGTATGTTTTCAGGA+TGG | + | chr6.3:43420553-43420572 | MS.gene30689:intron | 25.0% |
| !!! | ATTATGTATGTTTTCAGGAT+GGG | + | chr6.3:43420554-43420573 | MS.gene30689:intron | 25.0% |
| !!! | TTTAAAATGAGTGTCGTTTA+AGG | - | chr6.3:43420464-43420483 | None:intergenic | 25.0% |
| AACAAACCTCCTTTATAATC+TGG | - | chr6.3:43419162-43419181 | None:intergenic | 30.0% | |
| ACCTAAAATACACCATGAAA+TGG | + | chr6.3:43419247-43419266 | MS.gene30689:CDS | 30.0% | |
| ACTCTAATTATGTTCTCGTA+AGG | + | chr6.3:43418875-43418894 | MS.gene30689:CDS | 30.0% | |
| AGTGATTGTTGGATCAAAAT+CGG | + | chr6.3:43419467-43419486 | MS.gene30689:intron | 30.0% | |
| ATCATTTGAACTTGATCCAA+CGG | + | chr6.3:43419615-43419634 | MS.gene30689:intron | 30.0% | |
| ATTCCAATCAATCCATTTCA+TGG | - | chr6.3:43419262-43419281 | None:intergenic | 30.0% | |
| GAACTTAGATCATGATTGTA+AGG | + | chr6.3:43419359-43419378 | MS.gene30689:CDS | 30.0% | |
| GATATTCTTCCACAGTATTT+CGG | + | chr6.3:43418919-43418938 | MS.gene30689:CDS | 30.0% | |
| TAAATCCAAAATACCGAGTT+TGG | - | chr6.3:43419590-43419609 | None:intergenic | 30.0% | |
| TAGAAGCTAATATCTTGAGT+CGG | - | chr6.3:43420058-43420077 | None:intergenic | 30.0% | |
| TAGAATGTCTCAATTGTTGT+TGG | - | chr6.3:43420798-43420817 | None:intergenic | 30.0% | |
| TCAATTATGTATGCCTTAAC+AGG | - | chr6.3:43419297-43419316 | None:intergenic | 30.0% | |
| TCATTTCCATTTCCATAACT+TGG | - | chr6.3:43420601-43420620 | None:intergenic | 30.0% | |
| TTACCTATCTCTATACCAAA+AGG | - | chr6.3:43418988-43419007 | None:intergenic | 30.0% | |
| TTCATCAAGAATCATGTTGT+TGG | + | chr6.3:43419390-43419409 | MS.gene30689:intron | 30.0% | |
| ! | AAATACCGAGTTTGGAATTT+AGG | - | chr6.3:43419582-43419601 | None:intergenic | 30.0% |
| ! | AAATTCCAAACTCGGTATTT+TGG | + | chr6.3:43419582-43419601 | MS.gene30689:intron | 30.0% |
| ! | AATTAATTGGAGGGTACAAT+TGG | - | chr6.3:43420331-43420350 | None:intergenic | 30.0% |
| ! | CAAAATCATGATTTTGTGCT+AGG | + | chr6.3:43420109-43420128 | MS.gene30689:intron | 30.0% |
| ! | CTAGCACAAAATCATGATTT+TGG | - | chr6.3:43420111-43420130 | None:intergenic | 30.0% |
| ! | TCCATTTCATGGTGTATTTT+AGG | - | chr6.3:43419251-43419270 | None:intergenic | 30.0% |
| ! | TGAGCTTTATAATGTAACAG+TGG | + | chr6.3:43419113-43419132 | MS.gene30689:CDS | 30.0% |
| !! | ATCATGATTTTGGTCTGAAT+TGG | - | chr6.3:43420101-43420120 | None:intergenic | 30.0% |
| !! | CTAATGCTTTGAAGAAAGTA+GGG | - | chr6.3:43420361-43420380 | None:intergenic | 30.0% |
| !! | CTCGGTATTTTGGATTTAAA+AGG | + | chr6.3:43419592-43419611 | MS.gene30689:intron | 30.0% |
| !! | TCATGATTTTGGTCTGAATT+GGG | - | chr6.3:43420100-43420119 | None:intergenic | 30.0% |
| !! | TCTAATGCTTTGAAGAAAGT+AGG | - | chr6.3:43420362-43420381 | None:intergenic | 30.0% |
| !!! | TACTCGTTCTTCGTTTTTTA+TGG | + | chr6.3:43420816-43420835 | MS.gene30689:intron | 30.0% |
| !!! | TTTTGTTTTTTTTCAGCCGA+GGG | + | chr6.3:43420172-43420191 | MS.gene30689:intron | 30.0% |
| ACACCAGTTCATTTCTTTGT+TGG | + | chr6.3:43419698-43419717 | MS.gene30689:intron | 35.0% | |
| ACGATCCTAAATTCCAAACT+CGG | + | chr6.3:43419574-43419593 | MS.gene30689:intron | 35.0% | |
| AGAAGCTAATATCTTGAGTC+GGG | - | chr6.3:43420057-43420076 | None:intergenic | 35.0% | |
| ATAAATACGGAAGGCCTTTA+AGG | + | chr6.3:43419136-43419155 | MS.gene30689:CDS | 35.0% | |
| ATCAAGAATCATGTTGTTGG+TGG | + | chr6.3:43419393-43419412 | MS.gene30689:intron | 35.0% | |
| ATCTCTATACCAAAAGGATC+CGG | - | chr6.3:43418982-43419001 | None:intergenic | 35.0% | |
| ATGATTGTGTTCATGTGAAG+AGG | + | chr6.3:43419803-43419822 | MS.gene30689:CDS | 35.0% | |
| CACCAGTTCATTTCTTTGTT+GGG | + | chr6.3:43419699-43419718 | MS.gene30689:intron | 35.0% | |
| CTCGGCTGAAAAAAAACAAA+AGG | - | chr6.3:43420173-43420192 | None:intergenic | 35.0% | |
| GGAATTGGATCAACTCTATA+TGG | + | chr6.3:43419889-43419908 | MS.gene30689:CDS | 35.0% | |
| GGTACACTCAATTAATTGGA+GGG | - | chr6.3:43420340-43420359 | None:intergenic | 35.0% | |
| GGTTCTGTCAAGATAAATGA+TGG | + | chr6.3:43420676-43420695 | MS.gene30689:CDS | 35.0% | |
| GTAGGGTACACTCAATTAAT+TGG | - | chr6.3:43420344-43420363 | None:intergenic | 35.0% | |
| TAACAGTGGATAAATACGGA+AGG | + | chr6.3:43419127-43419146 | MS.gene30689:CDS | 35.0% | |
| TACCCAACAAAGAAATGAAC+TGG | - | chr6.3:43419704-43419723 | None:intergenic | 35.0% | |
| TATAAGTGCAGTTTCATCGA+TGG | + | chr6.3:43420919-43420938 | MS.gene30689:intron | 35.0% | |
| TATGGAAATGGAAATGAAGC+AGG | + | chr6.3:43420604-43420623 | MS.gene30689:CDS | 35.0% | |
| TCATTTATCTTGACAGAACC+TGG | - | chr6.3:43420676-43420695 | None:intergenic | 35.0% | |
| TCTGTACCAAGTTATGGAAA+TGG | + | chr6.3:43420592-43420611 | MS.gene30689:CDS | 35.0% | |
| TGTTCTTCTGTACCAAGTTA+TGG | + | chr6.3:43420586-43420605 | MS.gene30689:CDS | 35.0% | |
| TTAAGGCCAGATTATAAAGG+AGG | + | chr6.3:43419153-43419172 | MS.gene30689:CDS | 35.0% | |
| TTTAGGTAGAGACTTCTCTT+TGG | - | chr6.3:43419234-43419253 | None:intergenic | 35.0% | |
| ! | AATCATGTTGTTGGTGGAAA+TGG | + | chr6.3:43419399-43419418 | MS.gene30689:intron | 35.0% |
| ! | AATGGGACTTTTCTACCTAT+TGG | + | chr6.3:43420753-43420772 | MS.gene30689:CDS | 35.0% |
| ! | ACGACACTCATTTTAAACAG+AGG | + | chr6.3:43420467-43420486 | MS.gene30689:intron | 35.0% |
| ! | CGACACTCATTTTAAACAGA+GGG | + | chr6.3:43420468-43420487 | MS.gene30689:intron | 35.0% |
| ! | GAGAGTTTTACCAATCATTG+TGG | + | chr6.3:43420026-43420045 | MS.gene30689:intron | 35.0% |
| ! | GATCCTTTTGGTATAGAGAT+AGG | + | chr6.3:43418982-43419001 | MS.gene30689:CDS | 35.0% |
| ! | GTCTCAATTGTTGTTGGTAT+GGG | - | chr6.3:43420792-43420811 | None:intergenic | 35.0% |
| ! | TGATACACAATGCAAGTTGA+AGG | + | chr6.3:43419194-43419213 | MS.gene30689:CDS | 35.0% |
| ! | TGATTTTATGGTGCCTGTTA+AGG | + | chr6.3:43419281-43419300 | MS.gene30689:CDS | 35.0% |
| ! | TGTCTCAATTGTTGTTGGTA+TGG | - | chr6.3:43420793-43420812 | None:intergenic | 35.0% |
| !! | AAGTTGAAGGAAGGTTTTGA+GGG | + | chr6.3:43419207-43419226 | MS.gene30689:CDS | 35.0% |
| !! | ACACCATGAAATGGATTGAT+TGG | + | chr6.3:43419256-43419275 | MS.gene30689:CDS | 35.0% |
| !! | CCTTTAAGGCCAGATTATAA+AGG | + | chr6.3:43419150-43419169 | MS.gene30689:CDS | 35.0% |
| !! | CCTTTATAATCTGGCCTTAA+AGG | - | chr6.3:43419153-43419172 | None:intergenic | 35.0% |
| !! | TCTACTTGTTATCCTAAACC+AGG | + | chr6.3:43420655-43420674 | MS.gene30689:CDS | 35.0% |
| !!! | CTTTTGTTTTTTTTCAGCCG+AGG | + | chr6.3:43420171-43420190 | MS.gene30689:intron | 35.0% |
| AATCCTGCAGAAATTCCAGA+AGG | + | chr6.3:43419006-43419025 | MS.gene30689:CDS | 40.0% | |
| ACATAACCACCAGTTTGTAG+TGG | - | chr6.3:43419838-43419857 | None:intergenic | 40.0% | |
| ACCAAAAGGATCCGGAATAT+CGG | - | chr6.3:43418974-43418993 | None:intergenic | 40.0% | |
| AGAAATTCCAGAAGGGTTTG+AGG | + | chr6.3:43419014-43419033 | MS.gene30689:CDS | 40.0% | |
| AGTTTGGATTAAGTGACCGT+TGG | + | chr6.3:43419540-43419559 | MS.gene30689:intron | 40.0% | |
| ATCCTGCAGAAATTCCAGAA+GGG | + | chr6.3:43419007-43419026 | MS.gene30689:CDS | 40.0% | |
| ATCGACATATCAATGACCGT+TGG | - | chr6.3:43419634-43419653 | None:intergenic | 40.0% | |
| ATCGTCTGAACTTGATCCAA+CGG | - | chr6.3:43419559-43419578 | None:intergenic | 40.0% | |
| ATCTTGACAGAACCTGGTTT+AGG | - | chr6.3:43420670-43420689 | None:intergenic | 40.0% | |
| CACAATCATTTCCCTCATCA+TGG | - | chr6.3:43419792-43419811 | None:intergenic | 40.0% | |
| CATAACCACCAGTTTGTAGT+GGG | - | chr6.3:43419837-43419856 | None:intergenic | 40.0% | |
| CATCAACATTCAGGTGGAAT+TGG | + | chr6.3:43419874-43419893 | MS.gene30689:CDS | 40.0% | |
| GGGTACACTCAATTAATTGG+AGG | - | chr6.3:43420341-43420360 | None:intergenic | 40.0% | |
| GTGAATGGATCAGTGATTGT+TGG | + | chr6.3:43419456-43419475 | MS.gene30689:intron | 40.0% | |
| TATGTTCTCGTAAGGAACGA+TGG | + | chr6.3:43418883-43418902 | MS.gene30689:CDS | 40.0% | |
| TGGAAATGAAGCAGGAAATG+AGG | + | chr6.3:43420612-43420631 | MS.gene30689:CDS | 40.0% | |
| TGGATCAACTCTATATGGAC+AGG | + | chr6.3:43419894-43419913 | MS.gene30689:CDS | 40.0% | |
| TTTGTGCTAGGGTTCAAACT+TGG | + | chr6.3:43420121-43420140 | MS.gene30689:intron | 40.0% | |
| ! | ACACAATGCAAGTTGAAGGA+AGG | + | chr6.3:43419198-43419217 | MS.gene30689:CDS | 40.0% |
| ! | GAAATGGATTCCGTGTAGTT+GGG | + | chr6.3:43419415-43419434 | MS.gene30689:intron | 40.0% |
| !! | CAAGTTGAAGGAAGGTTTTG+AGG | + | chr6.3:43419206-43419225 | MS.gene30689:CDS | 40.0% |
| AAAGGATCCGGAATATCGGT+CGG | - | chr6.3:43418970-43418989 | None:intergenic | 45.0% | |
| AATGAAGCAGGAAATGAGGC+AGG | + | chr6.3:43420616-43420635 | MS.gene30689:CDS | 45.0% | |
| AATGAGGCAGGGTACATTGT+AGG | + | chr6.3:43420628-43420647 | MS.gene30689:CDS | 45.0% | |
| ACAAGTCTCCCACTACAAAC+TGG | + | chr6.3:43419826-43419845 | MS.gene30689:CDS | 45.0% | |
| ACTGTGGAAGAATATCTGCC+TGG | - | chr6.3:43418915-43418934 | None:intergenic | 45.0% | |
| AGCTAATATCTTGAGTCGGG+TGG | - | chr6.3:43420054-43420073 | None:intergenic | 45.0% | |
| ATGAAGCAGGAAATGAGGCA+GGG | + | chr6.3:43420617-43420636 | MS.gene30689:CDS | 45.0% | |
| ATTCATGCTATCGATACGCG+TGG | + | chr6.3:43419054-43419073 | MS.gene30689:CDS | 45.0% | |
| GCTGTTGCTCATCAACATTC+AGG | + | chr6.3:43419865-43419884 | MS.gene30689:CDS | 45.0% | |
| GTGGCGTAGAGGATAAGTTA+GGG | + | chr6.3:43419073-43419092 | MS.gene30689:CDS | 45.0% | |
| GTTGCTCATCAACATTCAGG+TGG | + | chr6.3:43419868-43419887 | MS.gene30689:CDS | 45.0% | |
| TGTAGCACAGACCATGATGA+GGG | + | chr6.3:43419778-43419797 | MS.gene30689:CDS | 45.0% | |
| TTCCTCGTGTTTCAGATCCA+AGG | - | chr6.3:43418945-43418964 | None:intergenic | 45.0% | |
| TTGTAGCACAGACCATGATG+AGG | + | chr6.3:43419777-43419796 | MS.gene30689:CDS | 45.0% | |
| ! | AAAGAGCACGCTGGAGTAAT+GGG | + | chr6.3:43420736-43420755 | MS.gene30689:CDS | 45.0% |
| ! | ACCGATATTCCGGATCCTTT+TGG | + | chr6.3:43418970-43418989 | MS.gene30689:CDS | 45.0% |
| ! | GGAAATGGATTCCGTGTAGT+TGG | + | chr6.3:43419414-43419433 | MS.gene30689:intron | 45.0% |
| ! | GGGACTTTTCTACCTATTGG+TGG | + | chr6.3:43420756-43420775 | MS.gene30689:CDS | 45.0% |
| !! | AACCCTTCTGGAATTTCTGC+AGG | - | chr6.3:43419012-43419031 | None:intergenic | 45.0% |
| AAGGAACGATGGCATATGCC+AGG | + | chr6.3:43418894-43418913 | MS.gene30689:CDS | 50.0% | |
| AGGAACACCGACCGATATTC+CGG | + | chr6.3:43418960-43418979 | MS.gene30689:CDS | 50.0% | |
| AGTCTCCCACTACAAACTGG+TGG | + | chr6.3:43419829-43419848 | MS.gene30689:CDS | 50.0% | |
| CACTTCTCCTCAAACCCTTC+TGG | - | chr6.3:43419024-43419043 | None:intergenic | 50.0% | |
| CAGAAGGGTTTGAGGAGAAG+TGG | + | chr6.3:43419022-43419041 | MS.gene30689:CDS | 50.0% | |
| CATTACTCCAGCGTGCTCTT+TGG | - | chr6.3:43420737-43420756 | None:intergenic | 50.0% | |
| CCATTCACTGCGTGAATGCA+GGG | - | chr6.3:43419444-43419463 | None:intergenic | 50.0% | |
| CGTGGCGTAGAGGATAAGTT+AGG | + | chr6.3:43419072-43419091 | MS.gene30689:CDS | 50.0% | |
| CTTCCACAGTATTTCGGCCT+TGG | + | chr6.3:43418925-43418944 | MS.gene30689:CDS | 50.0% | |
| GATCCAAGGCCGAAATACTG+TGG | - | chr6.3:43418931-43418950 | None:intergenic | 50.0% | |
| GGAGTTGTTCTGCCACCAAT+AGG | - | chr6.3:43420771-43420790 | None:intergenic | 50.0% | |
| TCCATTCACTGCGTGAATGC+AGG | - | chr6.3:43419445-43419464 | None:intergenic | 50.0% | |
| TCGGGTGGAACCACAATGAT+TGG | - | chr6.3:43420039-43420058 | None:intergenic | 50.0% | |
| ! | AACAACACCAAAGAGCACGC+TGG | + | chr6.3:43420727-43420746 | MS.gene30689:CDS | 50.0% |
| ! | CAAAGAGCACGCTGGAGTAA+TGG | + | chr6.3:43420735-43420754 | MS.gene30689:CDS | 50.0% |
| CCCTGCATTCACGCAGTGAA+TGG | + | chr6.3:43419441-43419460 | MS.gene30689:intron | 55.0% | |
| GCTTCTACAGTTGCGCGTAG+AGG | + | chr6.3:43420071-43420090 | MS.gene30689:intron | 55.0% | |
| TATCGATACGCGTGGCGTAG+AGG | + | chr6.3:43419062-43419081 | MS.gene30689:CDS | 55.0% | |
| TGCAGGGTCTCCCAACTACA+CGG | - | chr6.3:43419428-43419447 | None:intergenic | 55.0% | |
| ! | GGCCTTGGATCTGAAACACG+AGG | + | chr6.3:43418940-43418959 | MS.gene30689:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.3 | gene | 43418865 | 43420978 | 43418865 | ID=MS.gene30689 |
| chr6.3 | mRNA | 43418865 | 43420978 | 43418865 | ID=MS.gene30689.t1;Parent=MS.gene30689 |
| chr6.3 | exon | 43418865 | 43419380 | 43418865 | ID=MS.gene30689.t1.exon1;Parent=MS.gene30689.t1 |
| chr6.3 | CDS | 43418865 | 43419380 | 43418865 | ID=cds.MS.gene30689.t1;Parent=MS.gene30689.t1 |
| chr6.3 | exon | 43419757 | 43419915 | 43419757 | ID=MS.gene30689.t1.exon2;Parent=MS.gene30689.t1 |
| chr6.3 | CDS | 43419757 | 43419915 | 43419757 | ID=cds.MS.gene30689.t1;Parent=MS.gene30689.t1 |
| chr6.3 | exon | 43420571 | 43420827 | 43420571 | ID=MS.gene30689.t1.exon3;Parent=MS.gene30689.t1 |
| chr6.3 | CDS | 43420571 | 43420827 | 43420571 | ID=cds.MS.gene30689.t1;Parent=MS.gene30689.t1 |
| chr6.3 | exon | 43420930 | 43420978 | 43420930 | ID=MS.gene30689.t1.exon4;Parent=MS.gene30689.t1 |
| chr6.3 | CDS | 43420930 | 43420978 | 43420930 | ID=cds.MS.gene30689.t1;Parent=MS.gene30689.t1 |
| Gene Sequence |
| Protein sequence |
