Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35523.t1 | XP_003596910.1 | 97.1 | 308 | 9 | 0 | 1 | 308 | 1 | 308 | 6.20E-173 | 616.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35523.t1 | Q5PP51 | 75.5 | 318 | 78 | 0 | 1 | 318 | 1 | 318 | 2.2e-142 | 506.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35523.t1 | G7IRF9 | 97.1 | 308 | 9 | 0 | 1 | 308 | 1 | 308 | 4.4e-173 | 616.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene35523 | 0.810965 | 8.87E-51 | -1.69E-46 |
| MS.gene049151 | MS.gene35523 | 0.800529 | 1.38E-48 | -1.69E-46 |
| MS.gene049153 | MS.gene35523 | 0.818665 | 1.74E-52 | -1.69E-46 |
| MS.gene049170 | MS.gene35523 | 0.845539 | 3.81E-59 | -1.69E-46 |
| MS.gene049346 | MS.gene35523 | 0.805463 | 1.32E-49 | -1.69E-46 |
| MS.gene049356 | MS.gene35523 | 0.826937 | 2.06E-54 | -1.69E-46 |
| MS.gene049758 | MS.gene35523 | 0.847932 | 8.46E-60 | -1.69E-46 |
| MS.gene049910 | MS.gene35523 | 0.819288 | 1.26E-52 | -1.69E-46 |
| MS.gene049915 | MS.gene35523 | 0.802045 | 6.76E-49 | -1.69E-46 |
| MS.gene050301 | MS.gene35523 | 0.837494 | 5.03E-57 | -1.69E-46 |
| MS.gene050397 | MS.gene35523 | 0.824895 | 6.30E-54 | -1.69E-46 |
| MS.gene050400 | MS.gene35523 | 0.814022 | 1.90E-51 | -1.69E-46 |
| MS.gene050426 | MS.gene35523 | -0.862003 | 6.89E-64 | -1.69E-46 |
| MS.gene050464 | MS.gene35523 | 0.833772 | 4.40E-56 | -1.69E-46 |
| MS.gene050529 | MS.gene35523 | 0.835601 | 1.53E-56 | -1.69E-46 |
| MS.gene050642 | MS.gene35523 | 0.812887 | 3.38E-51 | -1.69E-46 |
| MS.gene050670 | MS.gene35523 | 0.886936 | 2.22E-72 | -1.69E-46 |
| MS.gene050971 | MS.gene35523 | 0.843815 | 1.11E-58 | -1.69E-46 |
| MS.gene05105 | MS.gene35523 | 0.85001 | 2.24E-60 | -1.69E-46 |
| MS.gene051360 | MS.gene35523 | 0.833132 | 6.36E-56 | -1.69E-46 |
| MS.gene051387 | MS.gene35523 | 0.801588 | 8.39E-49 | -1.69E-46 |
| MS.gene051525 | MS.gene35523 | 0.839401 | 1.62E-57 | -1.69E-46 |
| MS.gene051582 | MS.gene35523 | 0.842893 | 1.96E-58 | -1.69E-46 |
| MS.gene051860 | MS.gene35523 | 0.838625 | 2.57E-57 | -1.69E-46 |
| MS.gene051983 | MS.gene35523 | 0.824901 | 6.28E-54 | -1.69E-46 |
| MS.gene052011 | MS.gene35523 | -0.83045 | 2.92E-55 | -1.69E-46 |
| MS.gene052077 | MS.gene35523 | 0.903389 | 3.65E-79 | -1.69E-46 |
| MS.gene052134 | MS.gene35523 | 0.818713 | 1.70E-52 | -1.69E-46 |
| MS.gene052135 | MS.gene35523 | 0.830814 | 2.38E-55 | -1.69E-46 |
| MS.gene052136 | MS.gene35523 | 0.806161 | 9.41E-50 | -1.69E-46 |
| MS.gene052188 | MS.gene35523 | 0.886021 | 4.91E-72 | -1.69E-46 |
| MS.gene052253 | MS.gene35523 | 0.863539 | 2.32E-64 | -1.69E-46 |
| MS.gene052310 | MS.gene35523 | 0.854589 | 1.11E-61 | -1.69E-46 |
| MS.gene052340 | MS.gene35523 | 0.876157 | 1.75E-68 | -1.69E-46 |
| MS.gene052414 | MS.gene35523 | 0.82636 | 2.83E-54 | -1.69E-46 |
| MS.gene052481 | MS.gene35523 | 0.814413 | 1.56E-51 | -1.69E-46 |
| MS.gene052484 | MS.gene35523 | 0.801183 | 1.02E-48 | -1.69E-46 |
| MS.gene052485 | MS.gene35523 | 0.857334 | 1.75E-62 | -1.69E-46 |
| MS.gene053169 | MS.gene35523 | 0.810136 | 1.34E-50 | -1.69E-46 |
| MS.gene05316 | MS.gene35523 | 0.819104 | 1.38E-52 | -1.69E-46 |
| MS.gene053209 | MS.gene35523 | 0.842967 | 1.87E-58 | -1.69E-46 |
| MS.gene053449 | MS.gene35523 | 0.814829 | 1.26E-51 | -1.69E-46 |
| MS.gene053494 | MS.gene35523 | 0.802663 | 5.04E-49 | -1.69E-46 |
| MS.gene053557 | MS.gene35523 | 0.833986 | 3.89E-56 | -1.69E-46 |
| MS.gene053758 | MS.gene35523 | 0.817401 | 3.36E-52 | -1.69E-46 |
| MS.gene053836 | MS.gene35523 | 0.855176 | 7.52E-62 | -1.69E-46 |
| MS.gene053928 | MS.gene35523 | 0.820681 | 6.03E-53 | -1.69E-46 |
| MS.gene054123 | MS.gene35523 | 0.800607 | 1.33E-48 | -1.69E-46 |
| MS.gene054183 | MS.gene35523 | 0.819768 | 9.76E-53 | -1.69E-46 |
| MS.gene054349 | MS.gene35523 | 0.857154 | 1.98E-62 | -1.69E-46 |
| MS.gene054556 | MS.gene35523 | 0.846038 | 2.79E-59 | -1.69E-46 |
| MS.gene054719 | MS.gene35523 | 0.806382 | 8.45E-50 | -1.69E-46 |
| MS.gene054930 | MS.gene35523 | 0.83369 | 4.61E-56 | -1.69E-46 |
| MS.gene054955 | MS.gene35523 | 0.808216 | 3.45E-50 | -1.69E-46 |
| MS.gene055116 | MS.gene35523 | 0.886043 | 4.82E-72 | -1.69E-46 |
| MS.gene055277 | MS.gene35523 | 0.816436 | 5.54E-52 | -1.69E-46 |
| MS.gene055369 | MS.gene35523 | 0.811376 | 7.22E-51 | -1.69E-46 |
| MS.gene055422 | MS.gene35523 | 0.823529 | 1.32E-53 | -1.69E-46 |
| MS.gene055428 | MS.gene35523 | 0.807512 | 4.87E-50 | -1.69E-46 |
| MS.gene05553 | MS.gene35523 | 0.873088 | 1.93E-67 | -1.69E-46 |
| MS.gene055666 | MS.gene35523 | 0.81279 | 3.55E-51 | -1.69E-46 |
| MS.gene055859 | MS.gene35523 | 0.873119 | 1.88E-67 | -1.69E-46 |
| MS.gene056407 | MS.gene35523 | 0.848847 | 4.72E-60 | -1.69E-46 |
| MS.gene056511 | MS.gene35523 | 0.858577 | 7.49E-63 | -1.69E-46 |
| MS.gene056612 | MS.gene35523 | 0.801364 | 9.32E-49 | -1.69E-46 |
| MS.gene056659 | MS.gene35523 | 0.823565 | 1.29E-53 | -1.69E-46 |
| MS.gene056723 | MS.gene35523 | 0.831324 | 1.78E-55 | -1.69E-46 |
| MS.gene056899 | MS.gene35523 | -0.811747 | 6.00E-51 | -1.69E-46 |
| MS.gene056979 | MS.gene35523 | 0.818757 | 1.66E-52 | -1.69E-46 |
| MS.gene05702 | MS.gene35523 | 0.842694 | 2.21E-58 | -1.69E-46 |
| MS.gene057124 | MS.gene35523 | 0.834232 | 3.38E-56 | -1.69E-46 |
| MS.gene057396 | MS.gene35523 | 0.840118 | 1.05E-57 | -1.69E-46 |
| MS.gene057448 | MS.gene35523 | 0.879177 | 1.54E-69 | -1.69E-46 |
| MS.gene057449 | MS.gene35523 | 0.860867 | 1.53E-63 | -1.69E-46 |
| MS.gene057450 | MS.gene35523 | 0.866449 | 2.83E-65 | -1.69E-46 |
| MS.gene057749 | MS.gene35523 | 0.846243 | 2.45E-59 | -1.69E-46 |
| MS.gene057823 | MS.gene35523 | 0.842654 | 2.27E-58 | -1.69E-46 |
| MS.gene057927 | MS.gene35523 | 0.809738 | 1.63E-50 | -1.69E-46 |
| MS.gene058002 | MS.gene35523 | 0.855427 | 6.36E-62 | -1.69E-46 |
| MS.gene058007 | MS.gene35523 | 0.826308 | 2.91E-54 | -1.69E-46 |
| MS.gene058082 | MS.gene35523 | 0.820094 | 8.22E-53 | -1.69E-46 |
| MS.gene05811 | MS.gene35523 | 0.852789 | 3.67E-61 | -1.69E-46 |
| MS.gene058142 | MS.gene35523 | 0.829787 | 4.23E-55 | -1.69E-46 |
| MS.gene058276 | MS.gene35523 | 0.802377 | 5.77E-49 | -1.69E-46 |
| MS.gene058365 | MS.gene35523 | 0.818099 | 2.34E-52 | -1.69E-46 |
| MS.gene058376 | MS.gene35523 | 0.808104 | 3.65E-50 | -1.69E-46 |
| MS.gene058660 | MS.gene35523 | 0.809128 | 2.21E-50 | -1.69E-46 |
| MS.gene058700 | MS.gene35523 | 0.832812 | 7.63E-56 | -1.69E-46 |
| MS.gene058710 | MS.gene35523 | 0.850595 | 1.53E-60 | -1.69E-46 |
| MS.gene05886 | MS.gene35523 | 0.827642 | 1.40E-54 | -1.69E-46 |
| MS.gene058928 | MS.gene35523 | 0.836882 | 7.21E-57 | -1.69E-46 |
| MS.gene058949 | MS.gene35523 | 0.817059 | 4.01E-52 | -1.69E-46 |
| MS.gene059011 | MS.gene35523 | 0.814279 | 1.67E-51 | -1.69E-46 |
| MS.gene05907 | MS.gene35523 | 0.883892 | 3.05E-71 | -1.69E-46 |
| MS.gene059141 | MS.gene35523 | 0.803843 | 2.87E-49 | -1.69E-46 |
| MS.gene059285 | MS.gene35523 | 0.877165 | 7.82E-69 | -1.69E-46 |
| MS.gene059294 | MS.gene35523 | 0.812287 | 4.57E-51 | -1.69E-46 |
| MS.gene059366 | MS.gene35523 | 0.836703 | 8.01E-57 | -1.69E-46 |
| MS.gene059420 | MS.gene35523 | 0.871806 | 5.16E-67 | -1.69E-46 |
| MS.gene059462 | MS.gene35523 | 0.801179 | 1.02E-48 | -1.69E-46 |
| MS.gene059597 | MS.gene35523 | 0.828203 | 1.02E-54 | -1.69E-46 |
| MS.gene059676 | MS.gene35523 | 0.839447 | 1.58E-57 | -1.69E-46 |
| MS.gene059688 | MS.gene35523 | 0.868607 | 5.76E-66 | -1.69E-46 |
| MS.gene059692 | MS.gene35523 | 0.860321 | 2.24E-63 | -1.69E-46 |
| MS.gene059695 | MS.gene35523 | 0.858949 | 5.80E-63 | -1.69E-46 |
| MS.gene059788 | MS.gene35523 | 0.80817 | 3.53E-50 | -1.69E-46 |
| MS.gene059807 | MS.gene35523 | 0.856416 | 3.27E-62 | -1.69E-46 |
| MS.gene05984 | MS.gene35523 | 0.867828 | 1.03E-65 | -1.69E-46 |
| MS.gene059894 | MS.gene35523 | 0.818576 | 1.82E-52 | -1.69E-46 |
| MS.gene060403 | MS.gene35523 | 0.861016 | 1.38E-63 | -1.69E-46 |
| MS.gene060407 | MS.gene35523 | 0.812856 | 3.43E-51 | -1.69E-46 |
| MS.gene060495 | MS.gene35523 | 0.803478 | 3.42E-49 | -1.69E-46 |
| MS.gene060804 | MS.gene35523 | 0.80905 | 2.29E-50 | -1.69E-46 |
| MS.gene060837 | MS.gene35523 | 0.833112 | 6.43E-56 | -1.69E-46 |
| MS.gene060940 | MS.gene35523 | 0.806516 | 7.92E-50 | -1.69E-46 |
| MS.gene060943 | MS.gene35523 | 0.80104 | 1.09E-48 | -1.69E-46 |
| MS.gene060986 | MS.gene35523 | 0.833225 | 6.03E-56 | -1.69E-46 |
| MS.gene061002 | MS.gene35523 | 0.81153 | 6.68E-51 | -1.69E-46 |
| MS.gene061049 | MS.gene35523 | 0.858212 | 9.62E-63 | -1.69E-46 |
| MS.gene061051 | MS.gene35523 | -0.835688 | 1.45E-56 | -1.69E-46 |
| MS.gene061154 | MS.gene35523 | 0.8792 | 1.51E-69 | -1.69E-46 |
| MS.gene061159 | MS.gene35523 | 0.839835 | 1.25E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35523.t1 | MTR_2g087590 | 94.654 | 318 | 17 | 0 | 1 | 318 | 1 | 318 | 0.0 | 624 |
| MS.gene35523.t1 | MTR_1g070230 | 55.519 | 308 | 136 | 1 | 12 | 318 | 4 | 311 | 2.59e-125 | 363 |
| MS.gene35523.t1 | MTR_2g098110 | 38.321 | 274 | 160 | 2 | 39 | 309 | 355 | 622 | 2.54e-56 | 193 |
| MS.gene35523.t1 | MTR_4g064780 | 28.571 | 210 | 114 | 6 | 110 | 301 | 558 | 749 | 2.45e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35523.t1 | AT3G44160 | 75.472 | 318 | 78 | 0 | 1 | 318 | 1 | 318 | 0.0 | 513 |
| MS.gene35523.t1 | AT3G48620 | 61.290 | 217 | 65 | 3 | 108 | 308 | 25 | 238 | 1.35e-83 | 255 |
| MS.gene35523.t1 | AT5G19620 | 40.511 | 274 | 154 | 2 | 39 | 309 | 415 | 682 | 6.86e-59 | 201 |
| MS.gene35523.t1 | AT3G46740 | 28.440 | 218 | 120 | 7 | 102 | 301 | 564 | 763 | 7.71e-11 | 63.5 |
Find 82 sgRNAs with CRISPR-Local
Find 168 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCACTTCCACCAAATAAATT+TGG | 0.134229 | 2.4:-13218756 | None:intergenic |
| AATCCTCTTTCACTAGTAAT+TGG | 0.162368 | 2.4:+13218484 | MS.gene35523:CDS |
| ATCAAACATCCAAATTTATT+TGG | 0.180369 | 2.4:+13218747 | MS.gene35523:CDS |
| GGTGAAGGAGCAGTTGGTTC+TGG | 0.281377 | 2.4:+13220203 | MS.gene35523:CDS |
| GAGCGGGAGAAATTGTTTAT+AGG | 0.292776 | 2.4:-13219153 | None:intergenic |
| ACGGGTTTGCTTTGACTTGC+AGG | 0.300006 | 2.4:+13219459 | MS.gene35523:CDS |
| AGCGGGAGAAATTGTTTATA+GGG | 0.372125 | 2.4:-13219152 | None:intergenic |
| GTGAGAAGCTTGATGTTTCA+TGG | 0.384645 | 2.4:+13218775 | MS.gene35523:CDS |
| ATTCACAGGGATTTCATCTC+TGG | 0.392330 | 2.4:-13220841 | None:intergenic |
| TTACAGGTGGTTCAATCGTT+GGG | 0.396160 | 2.4:+13220123 | MS.gene35523:CDS |
| CTCGGAAGTGTCCGAGGGTA+TGG | 0.399077 | 2.4:+13220182 | MS.gene35523:CDS |
| TCGTAGCAACAAATTTAAAT+CGG | 0.401389 | 2.4:-13219818 | None:intergenic |
| ATTTGATGCTCAATACCTTC+AGG | 0.409105 | 2.4:+13218370 | MS.gene35523:CDS |
| TCATCAGTCTTTCGTGGTGC+AGG | 0.423045 | 2.4:+13218863 | MS.gene35523:CDS |
| ATCCTCTTTCACTAGTAATT+GGG | 0.431742 | 2.4:+13218485 | MS.gene35523:CDS |
| CTCCCAATTACTAGTGAAAG+AGG | 0.434708 | 2.4:-13218487 | None:intergenic |
| CACAACCAGCATAAAATTTG+AGG | 0.435411 | 2.4:+13219254 | MS.gene35523:CDS |
| TGGCAGTCCACATGACAGTA+TGG | 0.439822 | 2.4:+13219561 | MS.gene35523:CDS |
| CGGACTGGTTATCTTGTACC+TGG | 0.449059 | 2.4:+13220625 | MS.gene35523:CDS |
| TTTAAATTTGTTGCTACGAA+AGG | 0.451134 | 2.4:+13219822 | MS.gene35523:CDS |
| ATTTATCTAGATTAACAGTT+GGG | 0.453900 | 2.4:+13219193 | MS.gene35523:CDS |
| TCTTGCTCATCAGTCTTTCG+TGG | 0.456421 | 2.4:+13218857 | MS.gene35523:CDS |
| ATTATCCACTTAGAAAGAAC+AGG | 0.458623 | 2.4:-13219789 | None:intergenic |
| GACTAAGATGTTGGAAGGTG+TGG | 0.458704 | 2.4:+13220576 | MS.gene35523:intron |
| AATTTCTCCCGCTCGGGAAG+TGG | 0.463381 | 2.4:+13219162 | MS.gene35523:CDS |
| GTGAAGGAGCAGTTGGTTCT+GGG | 0.468959 | 2.4:+13220204 | MS.gene35523:CDS |
| ATCTAGATTAACAGTTGGGA+TGG | 0.469448 | 2.4:+13219197 | MS.gene35523:CDS |
| AAACATCCAAATTTATTTGG+TGG | 0.471379 | 2.4:+13218750 | MS.gene35523:CDS |
| ATACCATGGATTCCGATCTC+TGG | 0.476671 | 2.4:-13219129 | None:intergenic |
| TAGCGAACTGACTCTCCCTT+TGG | 0.478420 | 2.4:+13220247 | MS.gene35523:CDS |
| GGCTACATGGAGATATTCAC+AGG | 0.479233 | 2.4:-13220855 | None:intergenic |
| TGGTTCAATCGTTGGGGACA+TGG | 0.488806 | 2.4:+13220130 | MS.gene35523:CDS |
| GTATTCCTGTTCTTTCTAAG+TGG | 0.494653 | 2.4:+13219784 | MS.gene35523:CDS |
| TACACCTCCACTTCCCGAGC+GGG | 0.498840 | 2.4:-13219169 | None:intergenic |
| CTTACAGGTGGTTCAATCGT+TGG | 0.500285 | 2.4:+13220122 | MS.gene35523:CDS |
| TTCACTATAGACTAAGATGT+TGG | 0.504803 | 2.4:+13220567 | MS.gene35523:intron |
| TGGATTGCGGAACAGATTTG+CGG | 0.507880 | 2.4:+13220605 | MS.gene35523:CDS |
| CTGCTCCACTTTGAACTCAC+AGG | 0.511177 | 2.4:-13219231 | None:intergenic |
| TGCGGAACAGATTTGCGGAC+TGG | 0.512104 | 2.4:+13220610 | MS.gene35523:CDS |
| ATATAAGCAGGGATCGTGAC+GGG | 0.513332 | 2.4:+13219441 | MS.gene35523:CDS |
| TATAAACAATTTCTCCCGCT+CGG | 0.515264 | 2.4:+13219155 | MS.gene35523:CDS |
| AATTTATCTAGATTAACAGT+TGG | 0.516713 | 2.4:+13219192 | MS.gene35523:CDS |
| ATGATGGTCGCAATATAAGC+AGG | 0.520497 | 2.4:+13219429 | MS.gene35523:CDS |
| ATAAACAATTTCTCCCGCTC+GGG | 0.522046 | 2.4:+13219156 | MS.gene35523:CDS |
| CATTCTCTTTCACCAGAGAT+CGG | 0.529149 | 2.4:+13219117 | MS.gene35523:CDS |
| TTCTCCCGCTCGGGAAGTGG+AGG | 0.535594 | 2.4:+13219165 | MS.gene35523:CDS |
| TGAGAAGCTTGATGTTTCAT+GGG | 0.536213 | 2.4:+13218776 | MS.gene35523:CDS |
| AATTGTAACCTTTGCCAGCA+TGG | 0.537183 | 2.4:-13218227 | None:intergenic |
| GCTACGAAAGGAATCAAACT+TGG | 0.538847 | 2.4:+13219834 | MS.gene35523:CDS |
| TGGTTCTGGGAGATCATGCC+TGG | 0.541615 | 2.4:+13220217 | MS.gene35523:CDS |
| GCTTGATGTTTCATGGGACA+AGG | 0.545752 | 2.4:+13218782 | MS.gene35523:CDS |
| TTGCGACCATCATCGTTCAA+TGG | 0.552385 | 2.4:-13219419 | None:intergenic |
| GACCAACACTTCTCTTGACA+AGG | 0.557891 | 2.4:+13219856 | MS.gene35523:CDS |
| AACCTTGTCAAGAGAAGTGT+TGG | 0.558580 | 2.4:-13219858 | None:intergenic |
| GTTCGTCCATTGAACGATGA+TGG | 0.559073 | 2.4:+13219413 | MS.gene35523:CDS |
| AAGAGCATCCATGCTGGCAA+AGG | 0.570469 | 2.4:+13218219 | MS.gene35523:CDS |
| CCAATGGAAAATGCTTGGTA+AGG | 0.570469 | 2.4:-13220155 | None:intergenic |
| AACAGTTGGGATGGATCTGA+AGG | 0.572536 | 2.4:+13219206 | MS.gene35523:CDS |
| GCAAGAGTCTCAACACTCAA+AGG | 0.572688 | 2.4:+13219594 | MS.gene35523:CDS |
| AATTGTTTATAGGGATACCA+TGG | 0.576485 | 2.4:-13219143 | None:intergenic |
| GCTCAAAAGAGCATCCATGC+TGG | 0.579159 | 2.4:+13218213 | MS.gene35523:CDS |
| TCACCAGAGATCGGAATCCA+TGG | 0.580861 | 2.4:+13219126 | MS.gene35523:CDS |
| CTCTTTCACTAGTAATTGGG+AGG | 0.582217 | 2.4:+13218488 | MS.gene35523:CDS |
| CTGCTCCTTCACCATACCCT+CGG | 0.582460 | 2.4:-13220193 | None:intergenic |
| CTTGATGTTTCATGGGACAA+GGG | 0.592569 | 2.4:+13218783 | MS.gene35523:CDS |
| TCAGTTCGCTATTAGCCACC+AGG | 0.607710 | 2.4:-13220235 | None:intergenic |
| AGTGTCCGAGGGTATGGTGA+AGG | 0.614703 | 2.4:+13220188 | MS.gene35523:CDS |
| TACAGGTGGTTCAATCGTTG+GGG | 0.618411 | 2.4:+13220124 | MS.gene35523:CDS |
| CTATAGACTAAGATGTTGGA+AGG | 0.621331 | 2.4:+13220571 | MS.gene35523:intron |
| AATTGCTTATAGAAGGCCAC+GGG | 0.629000 | 2.4:+13218827 | MS.gene35523:CDS |
| GGGTATGGTGAAGGAGCAGT+TGG | 0.629254 | 2.4:+13220197 | MS.gene35523:CDS |
| TAATTGCTTATAGAAGGCCA+CGG | 0.639514 | 2.4:+13218826 | MS.gene35523:CDS |
| TTTAATCTTCAAATAGAACA+AGG | 0.640667 | 2.4:+13219762 | MS.gene35523:CDS |
| AATATAAGCAGGGATCGTGA+CGG | 0.648266 | 2.4:+13219440 | MS.gene35523:CDS |
| TGAGCAAGACATTCTTCCCG+TGG | 0.649237 | 2.4:-13218843 | None:intergenic |
| TGATGGTCGCAATATAAGCA+GGG | 0.653566 | 2.4:+13219430 | MS.gene35523:CDS |
| TCGTCTGACAGACTTACAGG+TGG | 0.660288 | 2.4:+13220110 | MS.gene35523:intron |
| TTCTGGGAGATCATGCCTGG+TGG | 0.662291 | 2.4:+13220220 | MS.gene35523:CDS |
| AAGACTACCATACTGTCATG+TGG | 0.666248 | 2.4:-13219568 | None:intergenic |
| AGGAACCTGTGAGTTCAAAG+TGG | 0.684187 | 2.4:+13219226 | MS.gene35523:CDS |
| TTACACCTCCACTTCCCGAG+CGG | 0.695775 | 2.4:-13219170 | None:intergenic |
| GCTACATGGAGATATTCACA+GGG | 0.718568 | 2.4:-13220854 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTGATAAATTATGAATTTTA+AGG | + | chr2.4:13220354-13220373 | MS.gene35523:intron | 10.0% |
| !! | ATATAATCACATAGAAAATA+GGG | - | chr2.4:13220063-13220082 | None:intergenic | 15.0% |
| !! | TATATAATCACATAGAAAAT+AGG | - | chr2.4:13220064-13220083 | None:intergenic | 15.0% |
| !!! | AATTTGAATTTTTCTTTAAC+AGG | + | chr2.4:13218452-13218471 | MS.gene35523:intron | 15.0% |
| !!! | ATATTTTAATTGCTTATAGA+AGG | + | chr2.4:13218820-13218839 | MS.gene35523:CDS | 15.0% |
| !!! | CTTTATATTACTATTTGTTT+TGG | + | chr2.4:13219345-13219364 | MS.gene35523:intron | 15.0% |
| !!! | TAAATAAACTTTTGTTTCAA+TGG | + | chr2.4:13218954-13218973 | MS.gene35523:intron | 15.0% |
| !!! | TTGTTTATGTTTTTGTTTTA+TGG | + | chr2.4:13218903-13218922 | MS.gene35523:intron | 15.0% |
| !! | AAATAGAATACATTAATGCT+TGG | + | chr2.4:13219966-13219985 | MS.gene35523:intron | 20.0% |
| !! | AATAGAATACATTAATGCTT+GGG | + | chr2.4:13219967-13219986 | MS.gene35523:intron | 20.0% |
| !! | AATGTGTATATGTTTAATTG+CGG | - | chr2.4:13220480-13220499 | None:intergenic | 20.0% |
| !! | AATTTATCTAGATTAACAGT+TGG | + | chr2.4:13219192-13219211 | MS.gene35523:CDS | 20.0% |
| !! | ATCAAACATCCAAATTTATT+TGG | + | chr2.4:13218747-13218766 | MS.gene35523:CDS | 20.0% |
| !! | ATTTATCTAGATTAACAGTT+GGG | + | chr2.4:13219193-13219212 | MS.gene35523:CDS | 20.0% |
| !! | ATTTGAAGATTAAACTGAAA+AGG | - | chr2.4:13219756-13219775 | None:intergenic | 20.0% |
| !! | TCATTCATTTACAAAATCAT+GGG | - | chr2.4:13218695-13218714 | None:intergenic | 20.0% |
| !! | TGTTCAATTTAGCTATTTAA+TGG | - | chr2.4:13220821-13220840 | None:intergenic | 20.0% |
| !! | TTTAATCTTCAAATAGAACA+AGG | + | chr2.4:13219762-13219781 | MS.gene35523:CDS | 20.0% |
| !!! | CGGTTAAATATGTTTATTTT+TGG | + | chr2.4:13220756-13220775 | MS.gene35523:intron | 20.0% |
| ! | AAACATCCAAATTTATTTGG+TGG | + | chr2.4:13218750-13218769 | MS.gene35523:CDS | 25.0% |
| ! | AATTCAGATACAAGACTAAT+TGG | - | chr2.4:13219703-13219722 | None:intergenic | 25.0% |
| ! | ACGTCTTCAATATAAAGTAT+TGG | + | chr2.4:13218641-13218660 | MS.gene35523:intron | 25.0% |
| ! | ATTCCTAGTTCCTATTTATA+TGG | + | chr2.4:13219670-13219689 | MS.gene35523:intron | 25.0% |
| ! | GTCATTCATTTACAAAATCA+TGG | - | chr2.4:13218696-13218715 | None:intergenic | 25.0% |
| ! | TCGTAGCAACAAATTTAAAT+CGG | - | chr2.4:13219821-13219840 | None:intergenic | 25.0% |
| ! | TGGTTAATAGCCATATAAAT+AGG | - | chr2.4:13219683-13219702 | None:intergenic | 25.0% |
| !!! | TTTAAATTTGTTGCTACGAA+AGG | + | chr2.4:13219822-13219841 | MS.gene35523:CDS | 25.0% |
| !!! | TTTTTGTTTTATGGTAAGAG+AGG | + | chr2.4:13218912-13218931 | MS.gene35523:intron | 25.0% |
| AAATAGGGTAACTCTATTTC+AGG | - | chr2.4:13220048-13220067 | None:intergenic | 30.0% | |
| AAATCGTTGGATGTAAATGT+TGG | - | chr2.4:13220730-13220749 | None:intergenic | 30.0% | |
| AATCCTCTTTCACTAGTAAT+TGG | + | chr2.4:13218484-13218503 | MS.gene35523:CDS | 30.0% | |
| AATTGTTTATAGGGATACCA+TGG | - | chr2.4:13219146-13219165 | None:intergenic | 30.0% | |
| AGCTATTTAATGGTACCAAT+GGG | - | chr2.4:13220811-13220830 | None:intergenic | 30.0% | |
| ATCCTCTTTCACTAGTAATT+GGG | + | chr2.4:13218485-13218504 | MS.gene35523:CDS | 30.0% | |
| ATTATCCACTTAGAAAGAAC+AGG | - | chr2.4:13219792-13219811 | None:intergenic | 30.0% | |
| TAACATGTGCTGAAAATTCA+CGG | - | chr2.4:13220332-13220351 | None:intergenic | 30.0% | |
| TAGCCATATAAATAGGAACT+AGG | - | chr2.4:13219676-13219695 | None:intergenic | 30.0% | |
| TAGCTATTTAATGGTACCAA+TGG | - | chr2.4:13220812-13220831 | None:intergenic | 30.0% | |
| TCACTTCCACCAAATAAATT+TGG | - | chr2.4:13218759-13218778 | None:intergenic | 30.0% | |
| TGTAAATATTGCGTACCAAA+GGG | - | chr2.4:13220265-13220284 | None:intergenic | 30.0% | |
| TTCACTATAGACTAAGATGT+TGG | + | chr2.4:13220567-13220586 | MS.gene35523:intron | 30.0% | |
| TTGTAAATATTGCGTACCAA+AGG | - | chr2.4:13220266-13220285 | None:intergenic | 30.0% | |
| !! | AACCAAGGATTTTAGTATTC+CGG | + | chr2.4:13219483-13219502 | MS.gene35523:intron | 30.0% |
| !! | CTCTATTTCAGGTTGAAATT+AGG | - | chr2.4:13220037-13220056 | None:intergenic | 30.0% |
| !! | TGTTTCAATGGATTTTTCTG+TGG | + | chr2.4:13218966-13218985 | MS.gene35523:intron | 30.0% |
| AACCGGAATACTAAAATCCT+TGG | - | chr2.4:13219488-13219507 | None:intergenic | 35.0% | |
| AGCGGGAGAAATTGTTTATA+GGG | - | chr2.4:13219155-13219174 | None:intergenic | 35.0% | |
| ATAGGAACTAGGAATCAAAC+TGG | - | chr2.4:13219665-13219684 | None:intergenic | 35.0% | |
| ATCTAGATTAACAGTTGGGA+TGG | + | chr2.4:13219197-13219216 | MS.gene35523:CDS | 35.0% | |
| ATGTACATTGCTTATTGCAG+TGG | + | chr2.4:13219541-13219560 | MS.gene35523:intron | 35.0% | |
| ATTTGATGCTCAATACCTTC+AGG | + | chr2.4:13218370-13218389 | MS.gene35523:CDS | 35.0% | |
| CACAACCAGCATAAAATTTG+AGG | + | chr2.4:13219254-13219273 | MS.gene35523:CDS | 35.0% | |
| CTATAGACTAAGATGTTGGA+AGG | + | chr2.4:13220571-13220590 | MS.gene35523:intron | 35.0% | |
| GAGCTGAGAAAAATGAATAG+AGG | - | chr2.4:13218401-13218420 | None:intergenic | 35.0% | |
| GCAAAATGATATTACTCACC+AGG | - | chr2.4:13220646-13220665 | None:intergenic | 35.0% | |
| GCTGCATATGTTGAAGATAT+TGG | + | chr2.4:13218665-13218684 | MS.gene35523:intron | 35.0% | |
| GTATTCCTGTTCTTTCTAAG+TGG | + | chr2.4:13219784-13219803 | MS.gene35523:CDS | 35.0% | |
| TAATGCTTGGGTTCACTAAT+AGG | + | chr2.4:13219979-13219998 | MS.gene35523:intron | 35.0% | |
| TAATTGCTTATAGAAGGCCA+CGG | + | chr2.4:13218826-13218845 | MS.gene35523:CDS | 35.0% | |
| TATAAACAATTTCTCCCGCT+CGG | + | chr2.4:13219155-13219174 | MS.gene35523:CDS | 35.0% | |
| TGAGAAGCTTGATGTTTCAT+GGG | + | chr2.4:13218776-13218795 | MS.gene35523:CDS | 35.0% | |
| TTAACCGTGCTAAAAATCGT+TGG | - | chr2.4:13220743-13220762 | None:intergenic | 35.0% | |
| ! | CCAGCATAAAATTTGAGGTT+CGG | + | chr2.4:13219259-13219278 | MS.gene35523:intron | 35.0% |
| ! | CTTACCAAGCATTTTCCATT+GGG | + | chr2.4:13220156-13220175 | MS.gene35523:CDS | 35.0% |
| ! | GATTTTTCTGTGGCAATTAG+AGG | + | chr2.4:13218976-13218995 | MS.gene35523:intron | 35.0% |
| ! | TTAATGGTACCAATGGGTTT+AGG | - | chr2.4:13220805-13220824 | None:intergenic | 35.0% |
| ! | TTACCAAGCATTTTCCATTG+GGG | + | chr2.4:13220157-13220176 | MS.gene35523:CDS | 35.0% |
| !! | CAGTTCGACATTTTGAAAAC+CGG | - | chr2.4:13219505-13219524 | None:intergenic | 35.0% |
| !!! | ACATCCAACGATTTTTAGCA+CGG | + | chr2.4:13220736-13220755 | MS.gene35523:intron | 35.0% |
| !!! | GTTTATTTTTGGTTCTGCTG+AGG | + | chr2.4:13220767-13220786 | MS.gene35523:intron | 35.0% |
| AACACTTCTCTTGACAAGGT+TGG | + | chr2.4:13219860-13219879 | MS.gene35523:intron | 40.0% | |
| AAGACTACCATACTGTCATG+TGG | - | chr2.4:13219571-13219590 | None:intergenic | 40.0% | |
| AATATAAGCAGGGATCGTGA+CGG | + | chr2.4:13219440-13219459 | MS.gene35523:CDS | 40.0% | |
| AATTGCTTATAGAAGGCCAC+GGG | + | chr2.4:13218827-13218846 | MS.gene35523:CDS | 40.0% | |
| AATTGTAACCTTTGCCAGCA+TGG | - | chr2.4:13218230-13218249 | None:intergenic | 40.0% | |
| AGTAGTGCATTGGATTGTTG+CGG | + | chr2.4:13218530-13218549 | MS.gene35523:intron | 40.0% | |
| ATAAACAATTTCTCCCGCTC+GGG | + | chr2.4:13219156-13219175 | MS.gene35523:CDS | 40.0% | |
| ATGATGGTCGCAATATAAGC+AGG | + | chr2.4:13219429-13219448 | MS.gene35523:CDS | 40.0% | |
| ATTCACAGGGATTTCATCTC+TGG | - | chr2.4:13220844-13220863 | None:intergenic | 40.0% | |
| ATTGTTGCGGCTATAAAGCA+CGG | + | chr2.4:13218543-13218562 | MS.gene35523:intron | 40.0% | |
| CAGTTTGATCAGTAGTGCAT+TGG | + | chr2.4:13218520-13218539 | MS.gene35523:intron | 40.0% | |
| CATTCTCTTTCACCAGAGAT+CGG | + | chr2.4:13219117-13219136 | MS.gene35523:CDS | 40.0% | |
| CCAATGGAAAATGCTTGGTA+AGG | - | chr2.4:13220158-13220177 | None:intergenic | 40.0% | |
| CTCCCAATTACTAGTGAAAG+AGG | - | chr2.4:13218490-13218509 | None:intergenic | 40.0% | |
| CTCTTTCACTAGTAATTGGG+AGG | + | chr2.4:13218488-13218507 | MS.gene35523:CDS | 40.0% | |
| CTTGATGTTTCATGGGACAA+GGG | + | chr2.4:13218783-13218802 | MS.gene35523:CDS | 40.0% | |
| CTTTCAAATCAGTCATGCAC+GGG | - | chr2.4:13220412-13220431 | None:intergenic | 40.0% | |
| GAGCGGGAGAAATTGTTTAT+AGG | - | chr2.4:13219156-13219175 | None:intergenic | 40.0% | |
| GCTACGAAAGGAATCAAACT+TGG | + | chr2.4:13219834-13219853 | MS.gene35523:CDS | 40.0% | |
| GCTTTCAAATCAGTCATGCA+CGG | - | chr2.4:13220413-13220432 | None:intergenic | 40.0% | |
| GTGAAAGAGAATGCTGCAAA+GGG | - | chr2.4:13219110-13219129 | None:intergenic | 40.0% | |
| GTGAGAAGCTTGATGTTTCA+TGG | + | chr2.4:13218775-13218794 | MS.gene35523:CDS | 40.0% | |
| TGAAAGAGAATGCTGCAAAG+GGG | - | chr2.4:13219109-13219128 | None:intergenic | 40.0% | |
| TGAATAGAGGTGAAACCTGA+AGG | - | chr2.4:13218388-13218407 | None:intergenic | 40.0% | |
| TGATGGTCGCAATATAAGCA+GGG | + | chr2.4:13219430-13219449 | MS.gene35523:CDS | 40.0% | |
| TGTAAGTCTGTCAGACGAAA+AGG | - | chr2.4:13220108-13220127 | None:intergenic | 40.0% | |
| TTACAGGTGGTTCAATCGTT+GGG | + | chr2.4:13220123-13220142 | MS.gene35523:CDS | 40.0% | |
| TTTCAAATCAGTCATGCACG+GGG | - | chr2.4:13220411-13220430 | None:intergenic | 40.0% | |
| ! | AACCTTGTCAAGAGAAGTGT+TGG | - | chr2.4:13219861-13219880 | None:intergenic | 40.0% |
| ! | ATGCGTCTTTTCGTGAATCA+AGG | + | chr2.4:13219282-13219301 | MS.gene35523:intron | 40.0% |
| ! | CCGAACCTCAAATTTTATGC+TGG | - | chr2.4:13219262-13219281 | None:intergenic | 40.0% |
| ! | CCTTACCAAGCATTTTCCAT+TGG | + | chr2.4:13220155-13220174 | MS.gene35523:CDS | 40.0% |
| ! | CGGTCATCTGCTTTCTTTTT+CGG | - | chr2.4:13220460-13220479 | None:intergenic | 40.0% |
| ! | TACCAAGCATTTTCCATTGG+GGG | + | chr2.4:13220158-13220177 | MS.gene35523:CDS | 40.0% |
| ! | TTTTCGTCTGACAGACTTAC+AGG | + | chr2.4:13220107-13220126 | MS.gene35523:intron | 40.0% |
| !! | ATAGCCGCATGTGTTTTTGT+CGG | + | chr2.4:13218609-13218628 | MS.gene35523:intron | 40.0% |
| !! | GGTGTGGTTTTTATGGATTG+CGG | + | chr2.4:13220592-13220611 | MS.gene35523:CDS | 40.0% |
| !! | GTTGGAAGGTGTGGTTTTTA+TGG | + | chr2.4:13220585-13220604 | MS.gene35523:CDS | 40.0% |
| !!! | TCATCTGCTTTCTTTTTCGG+AGG | - | chr2.4:13220457-13220476 | None:intergenic | 40.0% |
| AACAGTTGGGATGGATCTGA+AGG | + | chr2.4:13219206-13219225 | MS.gene35523:CDS | 45.0% | |
| AGGAACCTGTGAGTTCAAAG+TGG | + | chr2.4:13219226-13219245 | MS.gene35523:CDS | 45.0% | |
| ATACCATGGATTCCGATCTC+TGG | - | chr2.4:13219132-13219151 | None:intergenic | 45.0% | |
| ATATAAGCAGGGATCGTGAC+GGG | + | chr2.4:13219441-13219460 | MS.gene35523:CDS | 45.0% | |
| ATGGTAAGAGAGGTTCTGCT+AGG | + | chr2.4:13218922-13218941 | MS.gene35523:intron | 45.0% | |
| CTGAAACCACCTAAACCCAT+TGG | + | chr2.4:13220793-13220812 | MS.gene35523:intron | 45.0% | |
| CTTACAGGTGGTTCAATCGT+TGG | + | chr2.4:13220122-13220141 | MS.gene35523:CDS | 45.0% | |
| GACCAACACTTCTCTTGACA+AGG | + | chr2.4:13219856-13219875 | MS.gene35523:CDS | 45.0% | |
| GACTAAGATGTTGGAAGGTG+TGG | + | chr2.4:13220576-13220595 | MS.gene35523:intron | 45.0% | |
| GCAAGAGTCTCAACACTCAA+AGG | + | chr2.4:13219594-13219613 | MS.gene35523:CDS | 45.0% | |
| GCTTGATGTTTCATGGGACA+AGG | + | chr2.4:13218782-13218801 | MS.gene35523:CDS | 45.0% | |
| GGTGAAAGAGAATGCTGCAA+AGG | - | chr2.4:13219111-13219130 | None:intergenic | 45.0% | |
| GTGTCCGACAAAAACACATG+CGG | - | chr2.4:13218616-13218635 | None:intergenic | 45.0% | |
| GTTCGTCCATTGAACGATGA+TGG | + | chr2.4:13219413-13219432 | MS.gene35523:CDS | 45.0% | |
| TACAGGTGGTTCAATCGTTG+GGG | + | chr2.4:13220124-13220143 | MS.gene35523:CDS | 45.0% | |
| TCTTGCTCATCAGTCTTTCG+TGG | + | chr2.4:13218857-13218876 | MS.gene35523:CDS | 45.0% | |
| TGGATTGCGGAACAGATTTG+CGG | + | chr2.4:13220605-13220624 | MS.gene35523:CDS | 45.0% | |
| TTGCGACCATCATCGTTCAA+TGG | - | chr2.4:13219422-13219441 | None:intergenic | 45.0% | |
| ! | ACCAAGCATTTTCCATTGGG+GGG | + | chr2.4:13220159-13220178 | MS.gene35523:CDS | 45.0% |
| ! | ATGGTACCAATGGGTTTAGG+TGG | - | chr2.4:13220802-13220821 | None:intergenic | 45.0% |
| !! | CATGTGTTTTTGTCGGACAC+TGG | + | chr2.4:13218616-13218635 | MS.gene35523:intron | 45.0% |
| !! | CTTTGACTTGCAGGTAACCA+AGG | + | chr2.4:13219468-13219487 | MS.gene35523:intron | 45.0% |
| !!! | TTCAATTTTTTTTATAATAA+CGG | + | chr2.4:13218423-13218442 | MS.gene35523:intron | 5.0% |
| AGAGAGGTTCTGCTAGGCAA+TGG | + | chr2.4:13218928-13218947 | MS.gene35523:intron | 50.0% | |
| CTGCTCCACTTTGAACTCAC+AGG | - | chr2.4:13219234-13219253 | None:intergenic | 50.0% | |
| GTCTGTCAGACGAAAAGGCA+TGG | - | chr2.4:13220103-13220122 | None:intergenic | 50.0% | |
| TCACCAGAGATCGGAATCCA+TGG | + | chr2.4:13219126-13219145 | MS.gene35523:CDS | 50.0% | |
| TCAGTTCGCTATTAGCCACC+AGG | - | chr2.4:13220238-13220257 | None:intergenic | 50.0% | |
| TCATCAGTCTTTCGTGGTGC+AGG | + | chr2.4:13218863-13218882 | MS.gene35523:CDS | 50.0% | |
| TCGTCTGACAGACTTACAGG+TGG | + | chr2.4:13220110-13220129 | MS.gene35523:intron | 50.0% | |
| TGAGCAAGACATTCTTCCCG+TGG | - | chr2.4:13218846-13218865 | None:intergenic | 50.0% | |
| TGGACGAACATGCTGCATGA+TGG | - | chr2.4:13219402-13219421 | None:intergenic | 50.0% | |
| TGGCAGTCCACATGACAGTA+TGG | + | chr2.4:13219561-13219580 | MS.gene35523:CDS | 50.0% | |
| TGGTTCAATCGTTGGGGACA+TGG | + | chr2.4:13220130-13220149 | MS.gene35523:CDS | 50.0% | |
| ! | GTGAAGGAGCAGTTGGTTCT+GGG | + | chr2.4:13220204-13220223 | MS.gene35523:CDS | 50.0% |
| ! | TAGCGAACTGACTCTCCCTT+TGG | + | chr2.4:13220247-13220266 | MS.gene35523:CDS | 50.0% |
| !! | AAGAGCATCCATGCTGGCAA+AGG | + | chr2.4:13218219-13218238 | MS.gene35523:CDS | 50.0% |
| !! | ACGGGTTTGCTTTGACTTGC+AGG | + | chr2.4:13219459-13219478 | MS.gene35523:CDS | 50.0% |
| !! | CGGACTGGTTATCTTGTACC+TGG | + | chr2.4:13220625-13220644 | MS.gene35523:CDS | 50.0% |
| !! | GCTCAAAAGAGCATCCATGC+TGG | + | chr2.4:13218213-13218232 | MS.gene35523:CDS | 50.0% |
| AAGGTCATGCGCTCAGTCAG+TGG | - | chr2.4:13219737-13219756 | None:intergenic | 55.0% | |
| AATTTCTCCCGCTCGGGAAG+TGG | + | chr2.4:13219162-13219181 | MS.gene35523:CDS | 55.0% | |
| CAGTCTTTCGTGGTGCAGGT+TGG | + | chr2.4:13218867-13218886 | MS.gene35523:intron | 55.0% | |
| CTGCTCCTTCACCATACCCT+CGG | - | chr2.4:13220196-13220215 | None:intergenic | 55.0% | |
| GCCCCCCAATGGAAAATGCT+TGG | - | chr2.4:13220163-13220182 | None:intergenic | 55.0% | |
| GGGTATGGTGAAGGAGCAGT+TGG | + | chr2.4:13220197-13220216 | MS.gene35523:CDS | 55.0% | |
| TGCGGAACAGATTTGCGGAC+TGG | + | chr2.4:13220610-13220629 | MS.gene35523:CDS | 55.0% | |
| TTACACCTCCACTTCCCGAG+CGG | - | chr2.4:13219173-13219192 | None:intergenic | 55.0% | |
| ! | AGTGTCCGAGGGTATGGTGA+AGG | + | chr2.4:13220188-13220207 | MS.gene35523:CDS | 55.0% |
| ! | GCATTTTCCATTGGGGGGCT+CGG | + | chr2.4:13220164-13220183 | MS.gene35523:CDS | 55.0% |
| ! | GGTGAAGGAGCAGTTGGTTC+TGG | + | chr2.4:13220203-13220222 | MS.gene35523:CDS | 55.0% |
| ! | TTCTGGGAGATCATGCCTGG+TGG | + | chr2.4:13220220-13220239 | MS.gene35523:CDS | 55.0% |
| !! | TGGTTCTGGGAGATCATGCC+TGG | + | chr2.4:13220217-13220236 | MS.gene35523:CDS | 55.0% |
| TACACCTCCACTTCCCGAGC+GGG | - | chr2.4:13219172-13219191 | None:intergenic | 60.0% | |
| !! | CTCGGAAGTGTCCGAGGGTA+TGG | + | chr2.4:13220182-13220201 | MS.gene35523:CDS | 60.0% |
| GACACTTCCGAGCCCCCCAA+TGG | - | chr2.4:13220174-13220193 | None:intergenic | 65.0% | |
| TTCTCCCGCTCGGGAAGTGG+AGG | + | chr2.4:13219165-13219184 | MS.gene35523:CDS | 65.0% | |
| !! | GGGGGCTCGGAAGTGTCCGA+GGG | + | chr2.4:13220177-13220196 | MS.gene35523:CDS | 70.0% |
| !! | GGGGGGCTCGGAAGTGTCCG+AGG | + | chr2.4:13220176-13220195 | MS.gene35523:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 13218207 | 13220875 | 13218207 | ID=MS.gene35523 |
| chr2.4 | mRNA | 13218207 | 13220875 | 13218207 | ID=MS.gene35523.t1;Parent=MS.gene35523 |
| chr2.4 | exon | 13218207 | 13218240 | 13218207 | ID=MS.gene35523.t1.exon1;Parent=MS.gene35523.t1 |
| chr2.4 | CDS | 13218207 | 13218240 | 13218207 | ID=cds.MS.gene35523.t1;Parent=MS.gene35523.t1 |
| chr2.4 | exon | 13218325 | 13218391 | 13218325 | ID=MS.gene35523.t1.exon2;Parent=MS.gene35523.t1 |
| chr2.4 | CDS | 13218325 | 13218391 | 13218325 | ID=cds.MS.gene35523.t1;Parent=MS.gene35523.t1 |
| chr2.4 | exon | 13218474 | 13218509 | 13218474 | ID=MS.gene35523.t1.exon3;Parent=MS.gene35523.t1 |
| chr2.4 | CDS | 13218474 | 13218509 | 13218474 | ID=cds.MS.gene35523.t1;Parent=MS.gene35523.t1 |
| chr2.4 | exon | 13218740 | 13218884 | 13218740 | ID=MS.gene35523.t1.exon4;Parent=MS.gene35523.t1 |
| chr2.4 | CDS | 13218740 | 13218884 | 13218740 | ID=cds.MS.gene35523.t1;Parent=MS.gene35523.t1 |
| chr2.4 | exon | 13219117 | 13219275 | 13219117 | ID=MS.gene35523.t1.exon5;Parent=MS.gene35523.t1 |
| chr2.4 | CDS | 13219117 | 13219275 | 13219117 | ID=cds.MS.gene35523.t1;Parent=MS.gene35523.t1 |
| chr2.4 | exon | 13219410 | 13219480 | 13219410 | ID=MS.gene35523.t1.exon6;Parent=MS.gene35523.t1 |
| chr2.4 | CDS | 13219410 | 13219480 | 13219410 | ID=cds.MS.gene35523.t1;Parent=MS.gene35523.t1 |
| chr2.4 | exon | 13219561 | 13219639 | 13219561 | ID=MS.gene35523.t1.exon7;Parent=MS.gene35523.t1 |
| chr2.4 | CDS | 13219561 | 13219639 | 13219561 | ID=cds.MS.gene35523.t1;Parent=MS.gene35523.t1 |
| chr2.4 | exon | 13219762 | 13219877 | 13219762 | ID=MS.gene35523.t1.exon8;Parent=MS.gene35523.t1 |
| chr2.4 | CDS | 13219762 | 13219877 | 13219762 | ID=cds.MS.gene35523.t1;Parent=MS.gene35523.t1 |
| chr2.4 | exon | 13220121 | 13220268 | 13220121 | ID=MS.gene35523.t1.exon9;Parent=MS.gene35523.t1 |
| chr2.4 | CDS | 13220121 | 13220268 | 13220121 | ID=cds.MS.gene35523.t1;Parent=MS.gene35523.t1 |
| chr2.4 | exon | 13220577 | 13220646 | 13220577 | ID=MS.gene35523.t1.exon10;Parent=MS.gene35523.t1 |
| chr2.4 | CDS | 13220577 | 13220646 | 13220577 | ID=cds.MS.gene35523.t1;Parent=MS.gene35523.t1 |
| chr2.4 | exon | 13220829 | 13220875 | 13220829 | ID=MS.gene35523.t1.exon11;Parent=MS.gene35523.t1 |
| chr2.4 | CDS | 13220829 | 13220875 | 13220829 | ID=cds.MS.gene35523.t1;Parent=MS.gene35523.t1 |
| Gene Sequence |
| Protein sequence |
