Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41558.t1 | KEH34424.1 | 96.8 | 500 | 16 | 0 | 1 | 500 | 1 | 500 | 6.60E-275 | 956.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41558.t1 | Q9M876 | 66.9 | 495 | 138 | 4 | 18 | 500 | 31 | 511 | 2.1e-184 | 646.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41558.t1 | A0A072UXA5 | 96.8 | 500 | 16 | 0 | 1 | 500 | 1 | 500 | 4.8e-275 | 956.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049284 | MS.gene41558 | 0.854346 | 1.31E-61 | -1.69E-46 |
| MS.gene049297 | MS.gene41558 | 0.800231 | 1.59E-48 | -1.69E-46 |
| MS.gene049351 | MS.gene41558 | 0.818504 | 1.89E-52 | -1.69E-46 |
| MS.gene049389 | MS.gene41558 | 0.850635 | 1.49E-60 | -1.69E-46 |
| MS.gene049427 | MS.gene41558 | 0.815651 | 8.29E-52 | -1.69E-46 |
| MS.gene049491 | MS.gene41558 | 0.95996 | 5.07E-118 | -1.69E-46 |
| MS.gene049614 | MS.gene41558 | 0.829532 | 4.88E-55 | -1.69E-46 |
| MS.gene049661 | MS.gene41558 | 0.802124 | 6.51E-49 | -1.69E-46 |
| MS.gene049662 | MS.gene41558 | 0.801637 | 8.20E-49 | -1.69E-46 |
| MS.gene049758 | MS.gene41558 | 0.872675 | 2.65E-67 | -1.69E-46 |
| MS.gene049760 | MS.gene41558 | 0.805272 | 1.45E-49 | -1.69E-46 |
| MS.gene049910 | MS.gene41558 | 0.829372 | 5.34E-55 | -1.69E-46 |
| MS.gene050076 | MS.gene41558 | 0.876204 | 1.68E-68 | -1.69E-46 |
| MS.gene050099 | MS.gene41558 | 0.841958 | 3.46E-58 | -1.69E-46 |
| MS.gene050128 | MS.gene41558 | 0.851675 | 7.60E-61 | -1.69E-46 |
| MS.gene050301 | MS.gene41558 | 0.906548 | 1.32E-80 | -1.69E-46 |
| MS.gene050397 | MS.gene41558 | 0.821738 | 3.44E-53 | -1.69E-46 |
| MS.gene050404 | MS.gene41558 | 0.803531 | 3.33E-49 | -1.69E-46 |
| MS.gene050432 | MS.gene41558 | 0.843196 | 1.63E-58 | -1.69E-46 |
| MS.gene050529 | MS.gene41558 | 0.826247 | 3.01E-54 | -1.69E-46 |
| MS.gene050558 | MS.gene41558 | 0.808564 | 2.91E-50 | -1.69E-46 |
| MS.gene050767 | MS.gene41558 | 0.82417 | 9.33E-54 | -1.69E-46 |
| MS.gene050770 | MS.gene41558 | 0.828516 | 8.61E-55 | -1.69E-46 |
| MS.gene050812 | MS.gene41558 | 0.806806 | 6.88E-50 | -1.69E-46 |
| MS.gene05101 | MS.gene41558 | 0.895265 | 1.13E-75 | -1.69E-46 |
| MS.gene051471 | MS.gene41558 | 0.873408 | 1.50E-67 | -1.69E-46 |
| MS.gene051582 | MS.gene41558 | 0.828825 | 7.25E-55 | -1.69E-46 |
| MS.gene051662 | MS.gene41558 | 0.835543 | 1.58E-56 | -1.69E-46 |
| MS.gene051663 | MS.gene41558 | 0.856174 | 3.85E-62 | -1.69E-46 |
| MS.gene051860 | MS.gene41558 | 0.832323 | 1.01E-55 | -1.69E-46 |
| MS.gene052078 | MS.gene41558 | 0.869568 | 2.81E-66 | -1.69E-46 |
| MS.gene052178 | MS.gene41558 | 0.869608 | 2.73E-66 | -1.69E-46 |
| MS.gene052188 | MS.gene41558 | 0.865212 | 6.96E-65 | -1.69E-46 |
| MS.gene052207 | MS.gene41558 | 0.83147 | 1.64E-55 | -1.69E-46 |
| MS.gene052253 | MS.gene41558 | 0.819686 | 1.02E-52 | -1.69E-46 |
| MS.gene052287 | MS.gene41558 | 0.859696 | 3.46E-63 | -1.69E-46 |
| MS.gene052290 | MS.gene41558 | 0.836211 | 1.07E-56 | -1.69E-46 |
| MS.gene052310 | MS.gene41558 | 0.861166 | 1.24E-63 | -1.69E-46 |
| MS.gene052326 | MS.gene41558 | 0.889131 | 3.19E-73 | -1.69E-46 |
| MS.gene052340 | MS.gene41558 | 0.866774 | 2.23E-65 | -1.69E-46 |
| MS.gene052484 | MS.gene41558 | 0.803644 | 3.16E-49 | -1.69E-46 |
| MS.gene052485 | MS.gene41558 | 0.842345 | 2.74E-58 | -1.69E-46 |
| MS.gene053103 | MS.gene41558 | 0.831958 | 1.24E-55 | -1.69E-46 |
| MS.gene05316 | MS.gene41558 | 0.80917 | 2.16E-50 | -1.69E-46 |
| MS.gene053181 | MS.gene41558 | 0.81346 | 2.53E-51 | -1.69E-46 |
| MS.gene053209 | MS.gene41558 | 0.835747 | 1.40E-56 | -1.69E-46 |
| MS.gene053322 | MS.gene41558 | 0.824011 | 1.02E-53 | -1.69E-46 |
| MS.gene053557 | MS.gene41558 | 0.858953 | 5.78E-63 | -1.69E-46 |
| MS.gene053559 | MS.gene41558 | 0.82935 | 5.41E-55 | -1.69E-46 |
| MS.gene053836 | MS.gene41558 | 0.894945 | 1.53E-75 | -1.69E-46 |
| MS.gene054123 | MS.gene41558 | 0.848107 | 7.57E-60 | -1.69E-46 |
| MS.gene054376 | MS.gene41558 | 0.837232 | 5.87E-57 | -1.69E-46 |
| MS.gene054473 | MS.gene41558 | 0.839275 | 1.75E-57 | -1.69E-46 |
| MS.gene05455 | MS.gene41558 | 0.866751 | 2.27E-65 | -1.69E-46 |
| MS.gene054802 | MS.gene41558 | 0.800803 | 1.21E-48 | -1.69E-46 |
| MS.gene054803 | MS.gene41558 | 0.804381 | 2.22E-49 | -1.69E-46 |
| MS.gene054804 | MS.gene41558 | 0.802391 | 5.74E-49 | -1.69E-46 |
| MS.gene054930 | MS.gene41558 | 0.802188 | 6.31E-49 | -1.69E-46 |
| MS.gene054983 | MS.gene41558 | 0.806686 | 7.29E-50 | -1.69E-46 |
| MS.gene055116 | MS.gene41558 | 0.811902 | 5.55E-51 | -1.69E-46 |
| MS.gene055254 | MS.gene41558 | 0.80467 | 1.93E-49 | -1.69E-46 |
| MS.gene055277 | MS.gene41558 | 0.889993 | 1.47E-73 | -1.69E-46 |
| MS.gene055303 | MS.gene41558 | 0.806609 | 7.57E-50 | -1.69E-46 |
| MS.gene055390 | MS.gene41558 | 0.870708 | 1.19E-66 | -1.69E-46 |
| MS.gene055412 | MS.gene41558 | 0.844326 | 8.10E-59 | -1.69E-46 |
| MS.gene055422 | MS.gene41558 | 0.897087 | 1.97E-76 | -1.69E-46 |
| MS.gene055428 | MS.gene41558 | 0.901445 | 2.66E-78 | -1.69E-46 |
| MS.gene05553 | MS.gene41558 | 0.807032 | 6.16E-50 | -1.69E-46 |
| MS.gene055712 | MS.gene41558 | 0.814471 | 1.51E-51 | -1.69E-46 |
| MS.gene055896 | MS.gene41558 | 0.820023 | 8.54E-53 | -1.69E-46 |
| MS.gene056191 | MS.gene41558 | 0.828003 | 1.14E-54 | -1.69E-46 |
| MS.gene056314 | MS.gene41558 | 0.839443 | 1.58E-57 | -1.69E-46 |
| MS.gene056407 | MS.gene41558 | 0.828172 | 1.04E-54 | -1.69E-46 |
| MS.gene056410 | MS.gene41558 | 0.833275 | 5.86E-56 | -1.69E-46 |
| MS.gene056451 | MS.gene41558 | 0.801794 | 7.61E-49 | -1.69E-46 |
| MS.gene056609 | MS.gene41558 | 0.831072 | 2.05E-55 | -1.69E-46 |
| MS.gene056612 | MS.gene41558 | 0.853397 | 2.46E-61 | -1.69E-46 |
| MS.gene056719 | MS.gene41558 | 0.804136 | 2.50E-49 | -1.69E-46 |
| MS.gene056772 | MS.gene41558 | 0.800706 | 1.27E-48 | -1.69E-46 |
| MS.gene056796 | MS.gene41558 | 0.80421 | 2.41E-49 | -1.69E-46 |
| MS.gene056931 | MS.gene41558 | 0.840527 | 8.24E-58 | -1.69E-46 |
| MS.gene056933 | MS.gene41558 | 0.836982 | 6.80E-57 | -1.69E-46 |
| MS.gene056935 | MS.gene41558 | 0.823184 | 1.59E-53 | -1.69E-46 |
| MS.gene057011 | MS.gene41558 | 0.814196 | 1.74E-51 | -1.69E-46 |
| MS.gene05702 | MS.gene41558 | 0.861588 | 9.24E-64 | -1.69E-46 |
| MS.gene057121 | MS.gene41558 | 0.83604 | 1.18E-56 | -1.69E-46 |
| MS.gene057123 | MS.gene41558 | 0.838354 | 3.02E-57 | -1.69E-46 |
| MS.gene057146 | MS.gene41558 | 0.812318 | 4.50E-51 | -1.69E-46 |
| MS.gene057245 | MS.gene41558 | 0.834126 | 3.59E-56 | -1.69E-46 |
| MS.gene057295 | MS.gene41558 | 0.833965 | 3.94E-56 | -1.69E-46 |
| MS.gene05733 | MS.gene41558 | 0.859745 | 3.34E-63 | -1.69E-46 |
| MS.gene057439 | MS.gene41558 | 0.827427 | 1.57E-54 | -1.69E-46 |
| MS.gene057448 | MS.gene41558 | 0.836418 | 9.47E-57 | -1.69E-46 |
| MS.gene057449 | MS.gene41558 | 0.833188 | 6.16E-56 | -1.69E-46 |
| MS.gene057450 | MS.gene41558 | 0.847819 | 9.09E-60 | -1.69E-46 |
| MS.gene058002 | MS.gene41558 | 0.883271 | 5.17E-71 | -1.69E-46 |
| MS.gene058082 | MS.gene41558 | 0.838895 | 2.19E-57 | -1.69E-46 |
| MS.gene05811 | MS.gene41558 | 0.888463 | 5.77E-73 | -1.69E-46 |
| MS.gene058142 | MS.gene41558 | 0.820784 | 5.71E-53 | -1.69E-46 |
| MS.gene058233 | MS.gene41558 | 0.822832 | 1.92E-53 | -1.69E-46 |
| MS.gene058276 | MS.gene41558 | 0.816024 | 6.85E-52 | -1.69E-46 |
| MS.gene058293 | MS.gene41558 | 0.840471 | 8.52E-58 | -1.69E-46 |
| MS.gene058365 | MS.gene41558 | 0.829255 | 5.70E-55 | -1.69E-46 |
| MS.gene05842 | MS.gene41558 | 0.813053 | 3.11E-51 | -1.69E-46 |
| MS.gene058660 | MS.gene41558 | 0.887411 | 1.46E-72 | -1.69E-46 |
| MS.gene058833 | MS.gene41558 | 0.818026 | 2.43E-52 | -1.69E-46 |
| MS.gene058845 | MS.gene41558 | 0.843584 | 1.28E-58 | -1.69E-46 |
| MS.gene058928 | MS.gene41558 | 0.816755 | 4.70E-52 | -1.69E-46 |
| MS.gene05907 | MS.gene41558 | 0.88292 | 6.95E-71 | -1.69E-46 |
| MS.gene059285 | MS.gene41558 | 0.803828 | 2.89E-49 | -1.69E-46 |
| MS.gene059326 | MS.gene41558 | 0.832981 | 6.93E-56 | -1.69E-46 |
| MS.gene059342 | MS.gene41558 | 0.8271 | 1.88E-54 | -1.69E-46 |
| MS.gene059518 | MS.gene41558 | 0.874329 | 7.35E-68 | -1.69E-46 |
| MS.gene059536 | MS.gene41558 | 0.802859 | 4.59E-49 | -1.69E-46 |
| MS.gene059597 | MS.gene41558 | 0.91012 | 2.67E-82 | -1.69E-46 |
| MS.gene05959 | MS.gene41558 | 0.818797 | 1.63E-52 | -1.69E-46 |
| MS.gene059676 | MS.gene41558 | 0.866926 | 1.99E-65 | -1.69E-46 |
| MS.gene059688 | MS.gene41558 | 0.868479 | 6.33E-66 | -1.69E-46 |
| MS.gene059692 | MS.gene41558 | 0.883559 | 4.05E-71 | -1.69E-46 |
| MS.gene059695 | MS.gene41558 | 0.879098 | 1.64E-69 | -1.69E-46 |
| MS.gene059708 | MS.gene41558 | 0.840884 | 6.64E-58 | -1.69E-46 |
| MS.gene05984 | MS.gene41558 | 0.874517 | 6.35E-68 | -1.69E-46 |
| MS.gene059894 | MS.gene41558 | 0.908685 | 1.30E-81 | -1.69E-46 |
| MS.gene059899 | MS.gene41558 | 0.831268 | 1.84E-55 | -1.69E-46 |
| MS.gene059960 | MS.gene41558 | 0.820259 | 7.54E-53 | -1.69E-46 |
| MS.gene059974 | MS.gene41558 | 0.810256 | 1.26E-50 | -1.69E-46 |
| MS.gene060005 | MS.gene41558 | 0.827567 | 1.46E-54 | -1.69E-46 |
| MS.gene06037 | MS.gene41558 | 0.845487 | 3.94E-59 | -1.69E-46 |
| MS.gene060407 | MS.gene41558 | 0.84085 | 6.78E-58 | -1.69E-46 |
| MS.gene060476 | MS.gene41558 | 0.841363 | 4.97E-58 | -1.69E-46 |
| MS.gene060495 | MS.gene41558 | 0.800881 | 1.17E-48 | -1.69E-46 |
| MS.gene060559 | MS.gene41558 | 0.856493 | 3.10E-62 | -1.69E-46 |
| MS.gene060818 | MS.gene41558 | 0.812538 | 4.03E-51 | -1.69E-46 |
| MS.gene06090 | MS.gene41558 | 0.801656 | 8.12E-49 | -1.69E-46 |
| MS.gene061049 | MS.gene41558 | 0.874559 | 6.14E-68 | -1.69E-46 |
| MS.gene061051 | MS.gene41558 | -0.838957 | 2.11E-57 | -1.69E-46 |
| MS.gene061112 | MS.gene41558 | 0.815203 | 1.04E-51 | -1.69E-46 |
| MS.gene061200 | MS.gene41558 | 0.810483 | 1.13E-50 | -1.69E-46 |
| MS.gene061265 | MS.gene41558 | 0.818074 | 2.37E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41558.t1 | MTR_3g466250 | 96.800 | 500 | 16 | 0 | 1 | 500 | 1 | 500 | 0.0 | 993 |
| MS.gene41558.t1 | MTR_4g121070 | 90.020 | 501 | 30 | 6 | 1 | 500 | 1 | 482 | 0.0 | 894 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41558.t1 | AT3G02660 | 64.990 | 517 | 148 | 6 | 4 | 500 | 8 | 511 | 0.0 | 668 |
| MS.gene41558.t1 | AT3G02660 | 64.990 | 517 | 148 | 6 | 4 | 500 | 8 | 511 | 0.0 | 668 |
Find 116 sgRNAs with CRISPR-Local
Find 138 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACATTCAACTCTTTAAATTT+TGG | 0.121431 | 3.1:-50554966 | None:intergenic |
| CTTGCATTTGGGCAATTTAT+TGG | 0.174087 | 3.1:+50554752 | MS.gene41558:CDS |
| GTGGAAAGAGTTTAGTTTAT+TGG | 0.192217 | 3.1:+50555043 | MS.gene41558:CDS |
| GAGGGTGTTAATGTTCAAAT+TGG | 0.195282 | 3.1:+50555221 | MS.gene41558:CDS |
| GTTGATCTTTCTGTTTCTTC+TGG | 0.223800 | 3.1:+50555749 | MS.gene41558:CDS |
| ATCTTCCCCATGAACAAATT+TGG | 0.226803 | 3.1:-50555585 | None:intergenic |
| ATGGTTTGAACGAAGCTCTT+AGG | 0.304100 | 3.1:+50555606 | MS.gene41558:CDS |
| TTGCATTTGGGCAATTTATT+GGG | 0.319343 | 3.1:+50554753 | MS.gene41558:CDS |
| GCGCGTGTCGGTGACCCGTC+TGG | 0.321350 | 3.1:+50554843 | MS.gene41558:CDS |
| AACTGCCGAAAGCTTGCATT+TGG | 0.323309 | 3.1:+50554740 | MS.gene41558:CDS |
| AACAAATTTGGTAACTTCTT+CGG | 0.340398 | 3.1:-50555573 | None:intergenic |
| AGGGTGTTAATGTTCAAATT+GGG | 0.342798 | 3.1:+50555222 | MS.gene41558:CDS |
| TGGGTCTCATTGTTCTCTCT+TGG | 0.362873 | 3.1:+50554772 | MS.gene41558:CDS |
| TTCCGGATGCTGATGTTGTT+AGG | 0.364256 | 3.1:+50555447 | MS.gene41558:CDS |
| AAATACTGATAAAACTTATA+AGG | 0.365026 | 3.1:-50555416 | None:intergenic |
| AAACGGAGTGGAAGAGAAAA+GGG | 0.369578 | 3.1:-50554540 | None:intergenic |
| AGTCAGAGGATGGTGCAATT+TGG | 0.370053 | 3.1:+50555372 | MS.gene41558:CDS |
| AAAAGTGATGGTACGAAATT+CGG | 0.383590 | 3.1:+50555347 | MS.gene41558:CDS |
| AGGAAGATATTGCAGGTAGA+AGG | 0.384359 | 3.1:+50555290 | MS.gene41558:CDS |
| GAAGTTACCAAATTTGTTCA+TGG | 0.387892 | 3.1:+50555578 | MS.gene41558:CDS |
| TTTGAGGTTGTTGGTGATGT+TGG | 0.389071 | 3.1:-50554590 | None:intergenic |
| AGCCTCCGCTGAGCAGTATT+AGG | 0.404057 | 3.1:-50555548 | None:intergenic |
| CTGCTGGAACTGAATTGATT+AGG | 0.405094 | 3.1:+50555270 | MS.gene41558:CDS |
| AAACACCATCAGAACAATCT+TGG | 0.406125 | 3.1:+50554929 | MS.gene41558:CDS |
| TCAGCTTGATGTTGAAACTT+TGG | 0.407860 | 3.1:+50554884 | MS.gene41558:CDS |
| GGAAAGTGTTAGGAAGAGAT+TGG | 0.412929 | 3.1:+50555118 | MS.gene41558:CDS |
| TTTAAAGAGTTGAATGTGAA+TGG | 0.416037 | 3.1:+50554972 | MS.gene41558:CDS |
| CTCTCTTGGTTCCGCCGCTC+CGG | 0.419798 | 3.1:+50554786 | MS.gene41558:CDS |
| TGTTCTTGAAGCAAAATTTG+TGG | 0.422366 | 3.1:-50554448 | None:intergenic |
| ATTGATTAGGAAGATATTGC+AGG | 0.422855 | 3.1:+50555283 | MS.gene41558:CDS |
| TTTGTATTTGTTTCAGAATG+AGG | 0.423118 | 3.1:+50555202 | MS.gene41558:CDS |
| TTCGAGTGGTTTGAGGTTGT+TGG | 0.427101 | 3.1:-50554599 | None:intergenic |
| ACTTTGGAGAGGAATACTTT+AGG | 0.434783 | 3.1:+50554900 | MS.gene41558:CDS |
| TGGTTTGAACGAAGCTCTTA+GGG | 0.435112 | 3.1:+50555607 | MS.gene41558:CDS |
| TTGTATTTGTTTCAGAATGA+GGG | 0.436229 | 3.1:+50555203 | MS.gene41558:CDS |
| GAAGAAAGAGAGGGTTTGAA+TGG | 0.438610 | 3.1:-50554507 | None:intergenic |
| TATTGATGAGATAGTGAAGT+TGG | 0.446675 | 3.1:+50555496 | MS.gene41558:CDS |
| GAGTAGATAGTGAAAATAAG+AGG | 0.448915 | 3.1:+50555840 | MS.gene41558:CDS |
| TGATGGCTAAGGAAAGTGTT+AGG | 0.451139 | 3.1:+50555108 | MS.gene41558:CDS |
| AAATTTGTTCATGGGGAAGA+TGG | 0.459792 | 3.1:+50555587 | MS.gene41558:CDS |
| GTTGTTGGTGATGTTGGTGT+TGG | 0.462279 | 3.1:-50554584 | None:intergenic |
| ATTGCCCAAATGCAAGCTTT+CGG | 0.462905 | 3.1:-50554745 | None:intergenic |
| ATGACATTTCGAGTGGTTTG+AGG | 0.463983 | 3.1:-50554606 | None:intergenic |
| CAGGTAGAAGGTGGTACCTA+TGG | 0.467385 | 3.1:+50555302 | MS.gene41558:CDS |
| GGCGACTGAAGCGTTGAGGC+CGG | 0.469483 | 3.1:+50555628 | MS.gene41558:CDS |
| CGCGTGTCGGTGACCCGTCT+GGG | 0.470245 | 3.1:+50554844 | MS.gene41558:CDS |
| TGCAGGTTGTTCTTGTGAAA+CGG | 0.475058 | 3.1:-50554557 | None:intergenic |
| GAAACGGAGTGGAAGAGAAA+AGG | 0.475703 | 3.1:-50554541 | None:intergenic |
| AAATGCAAGCTTTCGGCAGT+TGG | 0.475737 | 3.1:-50554738 | None:intergenic |
| TTGGACTGGAAAACTATTGA+GGG | 0.479494 | 3.1:+50555665 | MS.gene41558:CDS |
| GATTGAGGCAGCTGATATAG+TGG | 0.483535 | 3.1:+50555862 | MS.gene41558:CDS |
| ACTGCCGAAAGCTTGCATTT+GGG | 0.489661 | 3.1:+50554741 | MS.gene41558:CDS |
| CATAACGTTGTGGCGTTGAT+CGG | 0.490763 | 3.1:+50554810 | MS.gene41558:CDS |
| ATGTTGGTGTTGGAGAGTGC+AGG | 0.494067 | 3.1:-50554574 | None:intergenic |
| CAATGGGGTAATATAACTGC+TGG | 0.495411 | 3.1:+50555254 | MS.gene41558:CDS |
| AAGTTACCAAATTTGTTCAT+GGG | 0.496359 | 3.1:+50555579 | MS.gene41558:CDS |
| AACACCATCAGAACAATCTT+GGG | 0.501063 | 3.1:+50554930 | MS.gene41558:CDS |
| AATGCAAGCTTTCGGCAGTT+GGG | 0.502532 | 3.1:-50554737 | None:intergenic |
| GAGGTGTGAAGAAGAAAGAG+AGG | 0.506075 | 3.1:-50554517 | None:intergenic |
| GCGACTGAAGCGTTGAGGCC+GGG | 0.522001 | 3.1:+50555629 | MS.gene41558:CDS |
| GCAGTATTAGGCACGTATCC+AGG | 0.523015 | 3.1:-50555536 | None:intergenic |
| GGGTGTTAATGTTCAAATTG+GGG | 0.524227 | 3.1:+50555223 | MS.gene41558:CDS |
| GAGGAAGAGATGAAGAGGCC+TGG | 0.525789 | 3.1:+50555518 | MS.gene41558:CDS |
| AACCTAACAACATCAGCATC+CGG | 0.526560 | 3.1:-50555449 | None:intergenic |
| TGATGAGATAGTGAAGTTGG+AGG | 0.529410 | 3.1:+50555499 | MS.gene41558:CDS |
| AGTAGGTTCAATGATGGCTA+AGG | 0.544395 | 3.1:+50555097 | MS.gene41558:CDS |
| GTTGGACTGGAAAACTATTG+AGG | 0.545813 | 3.1:+50555664 | MS.gene41558:CDS |
| TAGTGAAAATAAGAGGATTG+AGG | 0.546248 | 3.1:+50555847 | MS.gene41558:CDS |
| TTTACTTATCAGTTATTGCA+AGG | 0.547882 | 3.1:+50555170 | MS.gene41558:CDS |
| TCCAACTTTGTCTCAGATCC+CGG | 0.548872 | 3.1:-50555647 | None:intergenic |
| AACGTTGTGGCGTTGATCGG+TGG | 0.550991 | 3.1:+50554813 | MS.gene41558:CDS |
| GCCGGGATCTGAGACAAAGT+TGG | 0.556041 | 3.1:+50555646 | MS.gene41558:CDS |
| AATGCTTCTGAGGGAATCGT+TGG | 0.560260 | 3.1:-50554667 | None:intergenic |
| AAGAGGAAATGTTAAACCAT+AGG | 0.562252 | 3.1:-50555318 | None:intergenic |
| TGCTAGAGTAGGTTCAATGA+TGG | 0.566664 | 3.1:+50555091 | MS.gene41558:CDS |
| GATCTGAGACAAAGTTGGAC+TGG | 0.567564 | 3.1:+50555651 | MS.gene41558:CDS |
| ATCGGAATTCTCGAAGAAAG+AGG | 0.569696 | 3.1:+50554627 | MS.gene41558:CDS |
| AGTTACCAAATTTGTTCATG+GGG | 0.583369 | 3.1:+50555580 | MS.gene41558:CDS |
| AGTTGGAGGAAGAGATGAAG+AGG | 0.584304 | 3.1:+50555513 | MS.gene41558:CDS |
| GTTGGTAAATATGCTAGAGT+AGG | 0.584735 | 3.1:+50555080 | MS.gene41558:CDS |
| ACGACCCAAGATTGTTCTGA+TGG | 0.587418 | 3.1:-50554934 | None:intergenic |
| AGGTGTGAAGAAGAAAGAGA+GGG | 0.599625 | 3.1:-50554516 | None:intergenic |
| CAACGCCACAACGTTATGAC+CGG | 0.600993 | 3.1:-50554805 | None:intergenic |
| ACAGCAAATCTGCTGCGCGT+CGG | 0.601569 | 3.1:+50555780 | MS.gene41558:CDS |
| GAAAACTATTGAGGGGATTG+CGG | 0.602369 | 3.1:+50555673 | MS.gene41558:CDS |
| AACGGAGTGGAAGAGAAAAG+GGG | 0.605055 | 3.1:-50554539 | None:intergenic |
| GCGCGTCGGTTGTTAAAGCA+AGG | 0.617517 | 3.1:+50555794 | MS.gene41558:CDS |
| CCGCTCCGGTCATAACGTTG+TGG | 0.618092 | 3.1:+50554800 | MS.gene41558:CDS |
| TCGGAATTCTCGAAGAAAGA+GGG | 0.619551 | 3.1:+50554628 | MS.gene41558:CDS |
| CAAACCACTCGAAATGTCAT+CGG | 0.621062 | 3.1:+50554609 | MS.gene41558:CDS |
| CAACGTTATGACCGGAGCGG+CGG | 0.624768 | 3.1:-50554797 | None:intergenic |
| GAGGCAGCTGATATAGTGGA+TGG | 0.626682 | 3.1:+50555866 | MS.gene41558:CDS |
| GTTGTTCTTGTGAAACGGAG+TGG | 0.628582 | 3.1:-50554552 | None:intergenic |
| AAGAGATTGGAATCTGAACA+AGG | 0.631435 | 3.1:+50555131 | MS.gene41558:CDS |
| AAATTCGGTAAGTCAGAGGA+TGG | 0.632365 | 3.1:+50555362 | MS.gene41558:CDS |
| AAGATATTGCAGGTAGAAGG+TGG | 0.636964 | 3.1:+50555293 | MS.gene41558:CDS |
| TTGATGTTGAAACTTTGGAG+AGG | 0.637770 | 3.1:+50554889 | MS.gene41558:CDS |
| TTAGGGCGACTGAAGCGTTG+AGG | 0.638976 | 3.1:+50555624 | MS.gene41558:CDS |
| AATTCCGATGACATTTCGAG+TGG | 0.640824 | 3.1:-50554613 | None:intergenic |
| GGTGGCGCGACAGCGCGTGT+CGG | 0.641889 | 3.1:+50554831 | MS.gene41558:CDS |
| TACGAAATTCGGTAAGTCAG+AGG | 0.642084 | 3.1:+50555358 | MS.gene41558:CDS |
| TGTTTGATGAAATGCTTCTG+AGG | 0.642685 | 3.1:-50554677 | None:intergenic |
| AAAGTTTCAACATCAAGCTG+AGG | 0.647451 | 3.1:-50554882 | None:intergenic |
| AACAACATCAGCATCCGGAA+CGG | 0.648171 | 3.1:-50555444 | None:intergenic |
| TGGACTGGAAAACTATTGAG+GGG | 0.648535 | 3.1:+50555666 | MS.gene41558:CDS |
| AACTATTGAGGGGATTGCGG+AGG | 0.649646 | 3.1:+50555676 | MS.gene41558:CDS |
| GGAGTGGAAGAGAAAAGGGG+AGG | 0.653001 | 3.1:-50554536 | None:intergenic |
| GTTTGATGAAATGCTTCTGA+GGG | 0.654100 | 3.1:-50554676 | None:intergenic |
| GGTGTTAATGTTCAAATTGG+GGG | 0.656721 | 3.1:+50555224 | MS.gene41558:CDS |
| GCACCCTTAAAAGTCTACTG+TGG | 0.662552 | 3.1:+50554708 | MS.gene41558:CDS |
| TTATAAGGAGATAACATCGA+CGG | 0.669042 | 3.1:-50555401 | None:intergenic |
| TCATAAGCTAAAGAACAAGA+CGG | 0.675342 | 3.1:-50555704 | None:intergenic |
| TGCCTAATACTGCTCAGCGG+AGG | 0.682943 | 3.1:+50555546 | MS.gene41558:CDS |
| CGTCGGTTGTTAAAGCAAGG+AGG | 0.723269 | 3.1:+50555797 | MS.gene41558:CDS |
| CCACAACGTTATGACCGGAG+CGG | 0.752480 | 3.1:-50554800 | None:intergenic |
| ACGTGCCTAATACTGCTCAG+CGG | 0.796656 | 3.1:+50555543 | MS.gene41558:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATACTGATAAAACTTATA+AGG | - | chr3.1:50555419-50555438 | None:intergenic | 15.0% |
| !!! | TTGTTTTGAATAATTATGAT+TGG | + | chr3.1:50555021-50555040 | MS.gene41558:CDS | 15.0% |
| !!! | ACATTCAACTCTTTAAATTT+TGG | - | chr3.1:50554969-50554988 | None:intergenic | 20.0% |
| !!! | TTTATTGGATTTTCTGAAAA+GGG | + | chr3.1:50555058-50555077 | MS.gene41558:CDS | 20.0% |
| !!! | TTTGAAAGTTCTTACTTTTT+TGG | + | chr3.1:50555472-50555491 | MS.gene41558:CDS | 20.0% |
| !!! | TTTTGAATAATTATGATTGG+TGG | + | chr3.1:50555024-50555043 | MS.gene41558:CDS | 20.0% |
| ! | TTGTATTTGTTTCAGAATGA+GGG | + | chr3.1:50555203-50555222 | MS.gene41558:CDS | 25.0% |
| ! | TTTAAAGAGTTGAATGTGAA+TGG | + | chr3.1:50554972-50554991 | MS.gene41558:CDS | 25.0% |
| ! | TTTACTTATCAGTTATTGCA+AGG | + | chr3.1:50555170-50555189 | MS.gene41558:CDS | 25.0% |
| ! | TTTGTATTTGTTTCAGAATG+AGG | + | chr3.1:50555202-50555221 | MS.gene41558:CDS | 25.0% |
| !! | AACAAATTTGGTAACTTCTT+CGG | - | chr3.1:50555576-50555595 | None:intergenic | 25.0% |
| !! | AAGTTACCAAATTTGTTCAT+GGG | + | chr3.1:50555579-50555598 | MS.gene41558:CDS | 25.0% |
| !!! | GTTTATTGGATTTTCTGAAA+AGG | + | chr3.1:50555057-50555076 | MS.gene41558:CDS | 25.0% |
| AAAAGTGATGGTACGAAATT+CGG | + | chr3.1:50555347-50555366 | MS.gene41558:CDS | 30.0% | |
| AAGAGGAAATGTTAAACCAT+AGG | - | chr3.1:50555321-50555340 | None:intergenic | 30.0% | |
| ATCTGCAGGAAAAAAGAATA+AGG | + | chr3.1:50555904-50555923 | MS.gene41558:CDS | 30.0% | |
| ATTGATTAGGAAGATATTGC+AGG | + | chr3.1:50555283-50555302 | MS.gene41558:CDS | 30.0% | |
| GAGTAGATAGTGAAAATAAG+AGG | + | chr3.1:50555840-50555859 | MS.gene41558:CDS | 30.0% | |
| TAGTGAAAATAAGAGGATTG+AGG | + | chr3.1:50555847-50555866 | MS.gene41558:CDS | 30.0% | |
| TATTGATGAGATAGTGAAGT+TGG | + | chr3.1:50555496-50555515 | MS.gene41558:CDS | 30.0% | |
| TCATAAGCTAAAGAACAAGA+CGG | - | chr3.1:50555707-50555726 | None:intergenic | 30.0% | |
| TGTTCTTGAAGCAAAATTTG+TGG | - | chr3.1:50554451-50554470 | None:intergenic | 30.0% | |
| TTATAAGGAGATAACATCGA+CGG | - | chr3.1:50555404-50555423 | None:intergenic | 30.0% | |
| TTGCATTTGGGCAATTTATT+GGG | + | chr3.1:50554753-50554772 | MS.gene41558:CDS | 30.0% | |
| ! | AATCCACAGTAGACTTTTAA+GGG | - | chr3.1:50554714-50554733 | None:intergenic | 30.0% |
| ! | AGGGTGTTAATGTTCAAATT+GGG | + | chr3.1:50555222-50555241 | MS.gene41558:CDS | 30.0% |
| ! | AGTTACCAAATTTGTTCATG+GGG | + | chr3.1:50555580-50555599 | MS.gene41558:CDS | 30.0% |
| ! | GAAGTTACCAAATTTGTTCA+TGG | + | chr3.1:50555578-50555597 | MS.gene41558:CDS | 30.0% |
| ! | GTGGAAAGAGTTTAGTTTAT+TGG | + | chr3.1:50555043-50555062 | MS.gene41558:CDS | 30.0% |
| !!! | TCTTTTTTCCTGCAGATAAA+AGG | - | chr3.1:50555901-50555920 | None:intergenic | 30.0% |
| AAACACCATCAGAACAATCT+TGG | + | chr3.1:50554929-50554948 | MS.gene41558:CDS | 35.0% | |
| AAAGTTTCAACATCAAGCTG+AGG | - | chr3.1:50554885-50554904 | None:intergenic | 35.0% | |
| AACACCATCAGAACAATCTT+GGG | + | chr3.1:50554930-50554949 | MS.gene41558:CDS | 35.0% | |
| AAGAGATTGGAATCTGAACA+AGG | + | chr3.1:50555131-50555150 | MS.gene41558:CDS | 35.0% | |
| AGGAAAAAAGAATAAGGTGC+TGG | + | chr3.1:50555910-50555929 | MS.gene41558:CDS | 35.0% | |
| ATCTTCCCCATGAACAAATT+TGG | - | chr3.1:50555588-50555607 | None:intergenic | 35.0% | |
| CTTGCATTTGGGCAATTTAT+TGG | + | chr3.1:50554752-50554771 | MS.gene41558:CDS | 35.0% | |
| GGGTGTTAATGTTCAAATTG+GGG | + | chr3.1:50555223-50555242 | MS.gene41558:CDS | 35.0% | |
| GGTGTTAATGTTCAAATTGG+GGG | + | chr3.1:50555224-50555243 | MS.gene41558:CDS | 35.0% | |
| GTTTGATGAAATGCTTCTGA+GGG | - | chr3.1:50554679-50554698 | None:intergenic | 35.0% | |
| TCAGCTTGATGTTGAAACTT+TGG | + | chr3.1:50554884-50554903 | MS.gene41558:CDS | 35.0% | |
| TGTTTGATGAAATGCTTCTG+AGG | - | chr3.1:50554680-50554699 | None:intergenic | 35.0% | |
| ! | AAAGTTCTCCTTTTATCTGC+AGG | + | chr3.1:50555890-50555909 | MS.gene41558:CDS | 35.0% |
| ! | AAATTTGTTCATGGGGAAGA+TGG | + | chr3.1:50555587-50555606 | MS.gene41558:CDS | 35.0% |
| ! | ACTTTGGAGAGGAATACTTT+AGG | + | chr3.1:50554900-50554919 | MS.gene41558:CDS | 35.0% |
| ! | CCTCTTTTGTTGAAAAGTGA+TGG | + | chr3.1:50555335-50555354 | MS.gene41558:CDS | 35.0% |
| ! | CTTTCAATGTTTTTCCCAGA+CGG | - | chr3.1:50554861-50554880 | None:intergenic | 35.0% |
| ! | GAATCCACAGTAGACTTTTA+AGG | - | chr3.1:50554715-50554734 | None:intergenic | 35.0% |
| ! | GTTGATCTTTCTGTTTCTTC+TGG | + | chr3.1:50555749-50555768 | MS.gene41558:CDS | 35.0% |
| ! | GTTGGTAAATATGCTAGAGT+AGG | + | chr3.1:50555080-50555099 | MS.gene41558:CDS | 35.0% |
| ! | TTGATGTTGAAACTTTGGAG+AGG | + | chr3.1:50554889-50554908 | MS.gene41558:CDS | 35.0% |
| ! | TTGGACTGGAAAACTATTGA+GGG | + | chr3.1:50555665-50555684 | MS.gene41558:CDS | 35.0% |
| ! | TTTCAATGTTTTTCCCAGAC+GGG | - | chr3.1:50554860-50554879 | None:intergenic | 35.0% |
| !! | CCATCACTTTTCAACAAAAG+AGG | - | chr3.1:50555338-50555357 | None:intergenic | 35.0% |
| !! | CGATGTTTTGAATCAGTCTT+TGG | + | chr3.1:50555727-50555746 | MS.gene41558:CDS | 35.0% |
| !! | GAGGGTGTTAATGTTCAAAT+TGG | + | chr3.1:50555221-50555240 | MS.gene41558:CDS | 35.0% |
| !! | TTGGATTTTCTGAAAAGGGT+TGG | + | chr3.1:50555062-50555081 | MS.gene41558:CDS | 35.0% |
| !!! | TCAGTATTTTTTCTCCGTTC+CGG | + | chr3.1:50555430-50555449 | MS.gene41558:CDS | 35.0% |
| AAACGGAGTGGAAGAGAAAA+GGG | - | chr3.1:50554543-50554562 | None:intergenic | 40.0% | |
| AAATTCGGTAAGTCAGAGGA+TGG | + | chr3.1:50555362-50555381 | MS.gene41558:CDS | 40.0% | |
| AAATTGGGGGTAGTGATCAA+TGG | + | chr3.1:50555237-50555256 | MS.gene41558:CDS | 40.0% | |
| AACCTAACAACATCAGCATC+CGG | - | chr3.1:50555452-50555471 | None:intergenic | 40.0% | |
| AAGATATTGCAGGTAGAAGG+TGG | + | chr3.1:50555293-50555312 | MS.gene41558:CDS | 40.0% | |
| AATTCCGATGACATTTCGAG+TGG | - | chr3.1:50554616-50554635 | None:intergenic | 40.0% | |
| AATTGGGGGTAGTGATCAAT+GGG | + | chr3.1:50555238-50555257 | MS.gene41558:CDS | 40.0% | |
| AGGAAGATATTGCAGGTAGA+AGG | + | chr3.1:50555290-50555309 | MS.gene41558:CDS | 40.0% | |
| AGGTGTGAAGAAGAAAGAGA+GGG | - | chr3.1:50554519-50554538 | None:intergenic | 40.0% | |
| AGTAGGTTCAATGATGGCTA+AGG | + | chr3.1:50555097-50555116 | MS.gene41558:CDS | 40.0% | |
| ATCGGAATTCTCGAAGAAAG+AGG | + | chr3.1:50554627-50554646 | MS.gene41558:CDS | 40.0% | |
| ATGGTTTGAACGAAGCTCTT+AGG | + | chr3.1:50555606-50555625 | MS.gene41558:CDS | 40.0% | |
| ATTGCCCAAATGCAAGCTTT+CGG | - | chr3.1:50554748-50554767 | None:intergenic | 40.0% | |
| CAAACCACTCGAAATGTCAT+CGG | + | chr3.1:50554609-50554628 | MS.gene41558:CDS | 40.0% | |
| CAATGGGGTAATATAACTGC+TGG | + | chr3.1:50555254-50555273 | MS.gene41558:CDS | 40.0% | |
| CTGCTGGAACTGAATTGATT+AGG | + | chr3.1:50555270-50555289 | MS.gene41558:CDS | 40.0% | |
| GAAAACTATTGAGGGGATTG+CGG | + | chr3.1:50555673-50555692 | MS.gene41558:CDS | 40.0% | |
| GAAGAAAGAGAGGGTTTGAA+TGG | - | chr3.1:50554510-50554529 | None:intergenic | 40.0% | |
| TACGAAATTCGGTAAGTCAG+AGG | + | chr3.1:50555358-50555377 | MS.gene41558:CDS | 40.0% | |
| TCGGAATTCTCGAAGAAAGA+GGG | + | chr3.1:50554628-50554647 | MS.gene41558:CDS | 40.0% | |
| TGATGAGATAGTGAAGTTGG+AGG | + | chr3.1:50555499-50555518 | MS.gene41558:CDS | 40.0% | |
| TGCAGGTTGTTCTTGTGAAA+CGG | - | chr3.1:50554560-50554579 | None:intergenic | 40.0% | |
| TGCTAGAGTAGGTTCAATGA+TGG | + | chr3.1:50555091-50555110 | MS.gene41558:CDS | 40.0% | |
| TGGTTTGAACGAAGCTCTTA+GGG | + | chr3.1:50555607-50555626 | MS.gene41558:CDS | 40.0% | |
| ! | ATGACATTTCGAGTGGTTTG+AGG | - | chr3.1:50554609-50554628 | None:intergenic | 40.0% |
| ! | GTTGGACTGGAAAACTATTG+AGG | + | chr3.1:50555664-50555683 | MS.gene41558:CDS | 40.0% |
| ! | TGGACTGGAAAACTATTGAG+GGG | + | chr3.1:50555666-50555685 | MS.gene41558:CDS | 40.0% |
| !! | GACTTTTAAGGGTGCATTGA+TGG | - | chr3.1:50554703-50554722 | None:intergenic | 40.0% |
| !! | GGAAAGTGTTAGGAAGAGAT+TGG | + | chr3.1:50555118-50555137 | MS.gene41558:CDS | 40.0% |
| !! | TGATGGCTAAGGAAAGTGTT+AGG | + | chr3.1:50555108-50555127 | MS.gene41558:CDS | 40.0% |
| !! | TTTGAGGTTGTTGGTGATGT+TGG | - | chr3.1:50554593-50554612 | None:intergenic | 40.0% |
| AAATGCAAGCTTTCGGCAGT+TGG | - | chr3.1:50554741-50554760 | None:intergenic | 45.0% | |
| AACAACATCAGCATCCGGAA+CGG | - | chr3.1:50555447-50555466 | None:intergenic | 45.0% | |
| AACGGAGTGGAAGAGAAAAG+GGG | - | chr3.1:50554542-50554561 | None:intergenic | 45.0% | |
| AACTGCCGAAAGCTTGCATT+TGG | + | chr3.1:50554740-50554759 | MS.gene41558:CDS | 45.0% | |
| AATGCAAGCTTTCGGCAGTT+GGG | - | chr3.1:50554740-50554759 | None:intergenic | 45.0% | |
| ACGACCCAAGATTGTTCTGA+TGG | - | chr3.1:50554937-50554956 | None:intergenic | 45.0% | |
| ACTGCCGAAAGCTTGCATTT+GGG | + | chr3.1:50554741-50554760 | MS.gene41558:CDS | 45.0% | |
| AGTCAGAGGATGGTGCAATT+TGG | + | chr3.1:50555372-50555391 | MS.gene41558:CDS | 45.0% | |
| AGTTGGAGGAAGAGATGAAG+AGG | + | chr3.1:50555513-50555532 | MS.gene41558:CDS | 45.0% | |
| ATTGGGGGTAGTGATCAATG+GGG | + | chr3.1:50555239-50555258 | MS.gene41558:CDS | 45.0% | |
| GAAACGGAGTGGAAGAGAAA+AGG | - | chr3.1:50554544-50554563 | None:intergenic | 45.0% | |
| GAGGTGTGAAGAAGAAAGAG+AGG | - | chr3.1:50554520-50554539 | None:intergenic | 45.0% | |
| GATTGAGGCAGCTGATATAG+TGG | + | chr3.1:50555862-50555881 | MS.gene41558:CDS | 45.0% | |
| GCACCCTTAAAAGTCTACTG+TGG | + | chr3.1:50554708-50554727 | MS.gene41558:CDS | 45.0% | |
| GTTGTTCTTGTGAAACGGAG+TGG | - | chr3.1:50554555-50554574 | None:intergenic | 45.0% | |
| TCCAACTTTGTCTCAGATCC+CGG | - | chr3.1:50555650-50555669 | None:intergenic | 45.0% | |
| TGGGTCTCATTGTTCTCTCT+TGG | + | chr3.1:50554772-50554791 | MS.gene41558:CDS | 45.0% | |
| TTCCGGATGCTGATGTTGTT+AGG | + | chr3.1:50555447-50555466 | MS.gene41558:CDS | 45.0% | |
| ! | AATGCTTCTGAGGGAATCGT+TGG | - | chr3.1:50554670-50554689 | None:intergenic | 45.0% |
| ! | GATCTGAGACAAAGTTGGAC+TGG | + | chr3.1:50555651-50555670 | MS.gene41558:CDS | 45.0% |
| ! | TTCGAGTGGTTTGAGGTTGT+TGG | - | chr3.1:50554602-50554621 | None:intergenic | 45.0% |
| !! | CATAACGTTGTGGCGTTGAT+CGG | + | chr3.1:50554810-50554829 | MS.gene41558:CDS | 45.0% |
| !! | GTTGTTGGTGATGTTGGTGT+TGG | - | chr3.1:50554587-50554606 | None:intergenic | 45.0% |
| AACTATTGAGGGGATTGCGG+AGG | + | chr3.1:50555676-50555695 | MS.gene41558:CDS | 50.0% | |
| ACGTGCCTAATACTGCTCAG+CGG | + | chr3.1:50555543-50555562 | MS.gene41558:CDS | 50.0% | |
| CAACGCCACAACGTTATGAC+CGG | - | chr3.1:50554808-50554827 | None:intergenic | 50.0% | |
| CAGGTAGAAGGTGGTACCTA+TGG | + | chr3.1:50555302-50555321 | MS.gene41558:CDS | 50.0% | |
| GCAGTATTAGGCACGTATCC+AGG | - | chr3.1:50555539-50555558 | None:intergenic | 50.0% | |
| ! | CGTCGGTTGTTAAAGCAAGG+AGG | + | chr3.1:50555797-50555816 | MS.gene41558:CDS | 50.0% |
| ! | GAGGCAGCTGATATAGTGGA+TGG | + | chr3.1:50555866-50555885 | MS.gene41558:CDS | 50.0% |
| !! | ATGTTGGTGTTGGAGAGTGC+AGG | - | chr3.1:50554577-50554596 | None:intergenic | 50.0% |
| ACAGCAAATCTGCTGCGCGT+CGG | + | chr3.1:50555780-50555799 | MS.gene41558:CDS | 55.0% | |
| AGCCTCCGCTGAGCAGTATT+AGG | - | chr3.1:50555551-50555570 | None:intergenic | 55.0% | |
| CCACAACGTTATGACCGGAG+CGG | - | chr3.1:50554803-50554822 | None:intergenic | 55.0% | |
| GAGGAAGAGATGAAGAGGCC+TGG | + | chr3.1:50555518-50555537 | MS.gene41558:CDS | 55.0% | |
| GGAGTGGAAGAGAAAAGGGG+AGG | - | chr3.1:50554539-50554558 | None:intergenic | 55.0% | |
| TGCCTAATACTGCTCAGCGG+AGG | + | chr3.1:50555546-50555565 | MS.gene41558:CDS | 55.0% | |
| ! | GCCGGGATCTGAGACAAAGT+TGG | + | chr3.1:50555646-50555665 | MS.gene41558:CDS | 55.0% |
| !! | AACGTTGTGGCGTTGATCGG+TGG | + | chr3.1:50554813-50554832 | MS.gene41558:CDS | 55.0% |
| !! | GCGCGTCGGTTGTTAAAGCA+AGG | + | chr3.1:50555794-50555813 | MS.gene41558:CDS | 55.0% |
| !! | TTAGGGCGACTGAAGCGTTG+AGG | + | chr3.1:50555624-50555643 | MS.gene41558:CDS | 55.0% |
| CAACGTTATGACCGGAGCGG+CGG | - | chr3.1:50554800-50554819 | None:intergenic | 60.0% | |
| CCGCTCCGGTCATAACGTTG+TGG | + | chr3.1:50554800-50554819 | MS.gene41558:CDS | 60.0% | |
| CTCTCTTGGTTCCGCCGCTC+CGG | + | chr3.1:50554786-50554805 | MS.gene41558:CDS | 65.0% | |
| !! | GCGACTGAAGCGTTGAGGCC+GGG | + | chr3.1:50555629-50555648 | MS.gene41558:CDS | 65.0% |
| !! | GGCGACTGAAGCGTTGAGGC+CGG | + | chr3.1:50555628-50555647 | MS.gene41558:CDS | 65.0% |
| ! | CGCGTGTCGGTGACCCGTCT+GGG | + | chr3.1:50554844-50554863 | MS.gene41558:CDS | 70.0% |
| GGTGGCGCGACAGCGCGTGT+CGG | + | chr3.1:50554831-50554850 | MS.gene41558:CDS | 75.0% | |
| ! | GCGCGTGTCGGTGACCCGTC+TGG | + | chr3.1:50554843-50554862 | MS.gene41558:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 50554444 | 50555946 | 50554444 | ID=MS.gene41558 |
| chr3.1 | mRNA | 50554444 | 50555946 | 50554444 | ID=MS.gene41558.t1;Parent=MS.gene41558 |
| chr3.1 | exon | 50554444 | 50555946 | 50554444 | ID=MS.gene41558.t1.exon1;Parent=MS.gene41558.t1 |
| chr3.1 | CDS | 50554444 | 50555946 | 50554444 | ID=cds.MS.gene41558.t1;Parent=MS.gene41558.t1 |
| Gene Sequence |
| Protein sequence |
