Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44069.t1 | XP_003591063.1 | 84.9 | 252 | 32 | 4 | 1 | 250 | 1 | 248 | 2.10E-104 | 388.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44069.t1 | G7I7H8 | 84.9 | 252 | 32 | 4 | 1 | 250 | 1 | 248 | 1.5e-104 | 388.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049217 | MS.gene44069 | 0.814164 | 1.77E-51 | -1.69E-46 |
| MS.gene049285 | MS.gene44069 | 0.814402 | 1.57E-51 | -1.69E-46 |
| MS.gene049427 | MS.gene44069 | 0.895943 | 5.92E-76 | -1.69E-46 |
| MS.gene049491 | MS.gene44069 | 0.818773 | 1.65E-52 | -1.69E-46 |
| MS.gene049614 | MS.gene44069 | 0.845865 | 3.11E-59 | -1.69E-46 |
| MS.gene049661 | MS.gene44069 | 0.801539 | 8.59E-49 | -1.69E-46 |
| MS.gene049760 | MS.gene44069 | 0.808771 | 2.63E-50 | -1.69E-46 |
| MS.gene049805 | MS.gene44069 | 0.813977 | 1.95E-51 | -1.69E-46 |
| MS.gene050076 | MS.gene44069 | 0.853017 | 3.16E-61 | -1.69E-46 |
| MS.gene050163 | MS.gene44069 | 0.8424 | 2.65E-58 | -1.69E-46 |
| MS.gene050165 | MS.gene44069 | 0.826744 | 2.29E-54 | -1.69E-46 |
| MS.gene050333 | MS.gene44069 | 0.841949 | 3.48E-58 | -1.69E-46 |
| MS.gene050397 | MS.gene44069 | 0.802358 | 5.83E-49 | -1.69E-46 |
| MS.gene050432 | MS.gene44069 | 0.839822 | 1.26E-57 | -1.69E-46 |
| MS.gene050529 | MS.gene44069 | 0.814585 | 1.43E-51 | -1.69E-46 |
| MS.gene050767 | MS.gene44069 | 0.88031 | 6.10E-70 | -1.69E-46 |
| MS.gene050770 | MS.gene44069 | 0.88323 | 5.35E-71 | -1.69E-46 |
| MS.gene050772 | MS.gene44069 | 0.809005 | 2.34E-50 | -1.69E-46 |
| MS.gene050783 | MS.gene44069 | 0.804075 | 2.57E-49 | -1.69E-46 |
| MS.gene050812 | MS.gene44069 | 0.817746 | 2.81E-52 | -1.69E-46 |
| MS.gene05100 | MS.gene44069 | 0.823547 | 1.31E-53 | -1.69E-46 |
| MS.gene05101 | MS.gene44069 | 0.853273 | 2.66E-61 | -1.69E-46 |
| MS.gene051228 | MS.gene44069 | 0.859015 | 5.54E-63 | -1.69E-46 |
| MS.gene051434 | MS.gene44069 | 0.812765 | 3.60E-51 | -1.69E-46 |
| MS.gene051471 | MS.gene44069 | 0.8355 | 1.62E-56 | -1.69E-46 |
| MS.gene051666 | MS.gene44069 | 0.825029 | 5.86E-54 | -1.69E-46 |
| MS.gene051810 | MS.gene44069 | 0.821275 | 4.40E-53 | -1.69E-46 |
| MS.gene051949 | MS.gene44069 | 0.817467 | 3.25E-52 | -1.69E-46 |
| MS.gene052078 | MS.gene44069 | 0.835554 | 1.57E-56 | -1.69E-46 |
| MS.gene052271 | MS.gene44069 | 0.838965 | 2.10E-57 | -1.69E-46 |
| MS.gene052290 | MS.gene44069 | 0.85592 | 4.56E-62 | -1.69E-46 |
| MS.gene052310 | MS.gene44069 | 0.854246 | 1.40E-61 | -1.69E-46 |
| MS.gene052326 | MS.gene44069 | 0.849104 | 4.00E-60 | -1.69E-46 |
| MS.gene052379 | MS.gene44069 | 0.87411 | 8.72E-68 | -1.69E-46 |
| MS.gene052484 | MS.gene44069 | 0.812144 | 4.91E-51 | -1.69E-46 |
| MS.gene052870 | MS.gene44069 | 0.804555 | 2.04E-49 | -1.69E-46 |
| MS.gene052872 | MS.gene44069 | 0.803408 | 3.54E-49 | -1.69E-46 |
| MS.gene053009 | MS.gene44069 | 0.828845 | 7.17E-55 | -1.69E-46 |
| MS.gene053103 | MS.gene44069 | 0.828728 | 7.65E-55 | -1.69E-46 |
| MS.gene053104 | MS.gene44069 | 0.850241 | 1.93E-60 | -1.69E-46 |
| MS.gene053107 | MS.gene44069 | 0.833549 | 5.00E-56 | -1.69E-46 |
| MS.gene053213 | MS.gene44069 | 0.815562 | 8.68E-52 | -1.69E-46 |
| MS.gene053286 | MS.gene44069 | 0.808331 | 3.26E-50 | -1.69E-46 |
| MS.gene053322 | MS.gene44069 | 0.887555 | 1.29E-72 | -1.69E-46 |
| MS.gene053384 | MS.gene44069 | 0.839452 | 1.57E-57 | -1.69E-46 |
| MS.gene053557 | MS.gene44069 | 0.801139 | 1.04E-48 | -1.69E-46 |
| MS.gene053632 | MS.gene44069 | 0.801889 | 7.28E-49 | -1.69E-46 |
| MS.gene054123 | MS.gene44069 | 0.812735 | 3.65E-51 | -1.69E-46 |
| MS.gene054376 | MS.gene44069 | 0.884636 | 1.62E-71 | -1.69E-46 |
| MS.gene054642 | MS.gene44069 | 0.846135 | 2.63E-59 | -1.69E-46 |
| MS.gene054802 | MS.gene44069 | 0.880211 | 6.62E-70 | -1.69E-46 |
| MS.gene054803 | MS.gene44069 | 0.885777 | 6.07E-72 | -1.69E-46 |
| MS.gene054804 | MS.gene44069 | 0.883904 | 3.02E-71 | -1.69E-46 |
| MS.gene055206 | MS.gene44069 | 0.805305 | 1.42E-49 | -1.69E-46 |
| MS.gene055254 | MS.gene44069 | 0.865481 | 5.73E-65 | -1.69E-46 |
| MS.gene055277 | MS.gene44069 | 0.825634 | 4.21E-54 | -1.69E-46 |
| MS.gene055397 | MS.gene44069 | 0.899648 | 1.61E-77 | -1.69E-46 |
| MS.gene055412 | MS.gene44069 | 0.823324 | 1.47E-53 | -1.69E-46 |
| MS.gene055497 | MS.gene44069 | -0.804308 | 2.30E-49 | -1.69E-46 |
| MS.gene055499 | MS.gene44069 | 0.882927 | 6.91E-71 | -1.69E-46 |
| MS.gene055636 | MS.gene44069 | 0.835182 | 1.95E-56 | -1.69E-46 |
| MS.gene055638 | MS.gene44069 | 0.819586 | 1.07E-52 | -1.69E-46 |
| MS.gene055647 | MS.gene44069 | 0.841993 | 3.39E-58 | -1.69E-46 |
| MS.gene055896 | MS.gene44069 | 0.871772 | 5.30E-67 | -1.69E-46 |
| MS.gene05592 | MS.gene44069 | 0.831309 | 1.80E-55 | -1.69E-46 |
| MS.gene055956 | MS.gene44069 | -0.82792 | 1.20E-54 | -1.69E-46 |
| MS.gene056374 | MS.gene44069 | 0.811381 | 7.20E-51 | -1.69E-46 |
| MS.gene056549 | MS.gene44069 | 0.811818 | 5.79E-51 | -1.69E-46 |
| MS.gene056609 | MS.gene44069 | 0.86596 | 4.04E-65 | -1.69E-46 |
| MS.gene056657 | MS.gene44069 | 0.817251 | 3.63E-52 | -1.69E-46 |
| MS.gene056796 | MS.gene44069 | 0.808464 | 3.06E-50 | -1.69E-46 |
| MS.gene056897 | MS.gene44069 | 0.836262 | 1.04E-56 | -1.69E-46 |
| MS.gene056903 | MS.gene44069 | 0.809725 | 1.64E-50 | -1.69E-46 |
| MS.gene057011 | MS.gene44069 | 0.871078 | 8.99E-67 | -1.69E-46 |
| MS.gene057123 | MS.gene44069 | 0.821561 | 3.78E-53 | -1.69E-46 |
| MS.gene057129 | MS.gene44069 | 0.880787 | 4.12E-70 | -1.69E-46 |
| MS.gene057146 | MS.gene44069 | 0.833909 | 4.07E-56 | -1.69E-46 |
| MS.gene057246 | MS.gene44069 | 0.866875 | 2.07E-65 | -1.69E-46 |
| MS.gene057295 | MS.gene44069 | 0.835239 | 1.88E-56 | -1.69E-46 |
| MS.gene057331 | MS.gene44069 | 0.801476 | 8.84E-49 | -1.69E-46 |
| MS.gene057416 | MS.gene44069 | 0.81833 | 2.07E-52 | -1.69E-46 |
| MS.gene058019 | MS.gene44069 | 0.820049 | 8.42E-53 | -1.69E-46 |
| MS.gene058082 | MS.gene44069 | 0.804029 | 2.63E-49 | -1.69E-46 |
| MS.gene058233 | MS.gene44069 | 0.819838 | 9.41E-53 | -1.69E-46 |
| MS.gene058293 | MS.gene44069 | 0.839202 | 1.82E-57 | -1.69E-46 |
| MS.gene058323 | MS.gene44069 | 0.809836 | 1.55E-50 | -1.69E-46 |
| MS.gene058419 | MS.gene44069 | 0.810182 | 1.31E-50 | -1.69E-46 |
| MS.gene058660 | MS.gene44069 | 0.855791 | 4.98E-62 | -1.69E-46 |
| MS.gene058723 | MS.gene44069 | 0.806628 | 7.50E-50 | -1.69E-46 |
| MS.gene059029 | MS.gene44069 | 0.837325 | 5.56E-57 | -1.69E-46 |
| MS.gene059326 | MS.gene44069 | 0.852507 | 4.41E-61 | -1.69E-46 |
| MS.gene05934 | MS.gene44069 | 0.827633 | 1.40E-54 | -1.69E-46 |
| MS.gene059536 | MS.gene44069 | 0.869161 | 3.81E-66 | -1.69E-46 |
| MS.gene059597 | MS.gene44069 | 0.823106 | 1.66E-53 | -1.69E-46 |
| MS.gene05959 | MS.gene44069 | 0.823198 | 1.58E-53 | -1.69E-46 |
| MS.gene059676 | MS.gene44069 | 0.828755 | 7.53E-55 | -1.69E-46 |
| MS.gene059677 | MS.gene44069 | 0.809424 | 1.90E-50 | -1.69E-46 |
| MS.gene059688 | MS.gene44069 | 0.805594 | 1.24E-49 | -1.69E-46 |
| MS.gene059692 | MS.gene44069 | 0.813395 | 2.62E-51 | -1.69E-46 |
| MS.gene059695 | MS.gene44069 | 0.807392 | 5.17E-50 | -1.69E-46 |
| MS.gene059708 | MS.gene44069 | 0.81173 | 6.05E-51 | -1.69E-46 |
| MS.gene059858 | MS.gene44069 | 0.849544 | 3.02E-60 | -1.69E-46 |
| MS.gene059894 | MS.gene44069 | 0.823212 | 1.56E-53 | -1.69E-46 |
| MS.gene059902 | MS.gene44069 | 0.801206 | 1.00E-48 | -1.69E-46 |
| MS.gene059960 | MS.gene44069 | 0.921366 | 3.92E-88 | -1.69E-46 |
| MS.gene060193 | MS.gene44069 | 0.810975 | 8.82E-51 | -1.69E-46 |
| MS.gene060804 | MS.gene44069 | 0.839766 | 1.30E-57 | -1.69E-46 |
| MS.gene060818 | MS.gene44069 | 0.858765 | 6.58E-63 | -1.69E-46 |
| MS.gene061041 | MS.gene44069 | 0.843358 | 1.47E-58 | -1.69E-46 |
| MS.gene061051 | MS.gene44069 | -0.812468 | 4.18E-51 | -1.69E-46 |
| MS.gene061150 | MS.gene44069 | 0.8391 | 1.94E-57 | -1.69E-46 |
| MS.gene061200 | MS.gene44069 | 0.890002 | 1.46E-73 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44069.t1 | MTR_1g082430 | 92.885 | 253 | 10 | 5 | 1 | 250 | 1 | 248 | 5.26e-165 | 456 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44069.t1 | AT5G27390 | 49.606 | 254 | 111 | 5 | 1 | 250 | 1 | 241 | 3.72e-77 | 233 |
| MS.gene44069.t1 | AT5G27390 | 44.211 | 285 | 111 | 6 | 1 | 250 | 1 | 272 | 1.63e-70 | 218 |
| MS.gene44069.t1 | AT5G27390 | 44.809 | 183 | 85 | 4 | 1 | 179 | 1 | 171 | 3.33e-43 | 145 |
| MS.gene44069.t1 | AT5G27390 | 45.304 | 181 | 83 | 4 | 1 | 177 | 1 | 169 | 6.30e-43 | 145 |
Find 64 sgRNAs with CRISPR-Local
Find 268 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACATACTATTTCTATGAATT+TGG | 0.148599 | 1.3:+58031352 | MS.gene44069:CDS |
| AGTGCCGGAATGAATCTTTA+TGG | 0.239943 | 1.3:+58029903 | MS.gene44069:CDS |
| ATTCTATAGGTTATTATTGC+TGG | 0.294462 | 1.3:+58031811 | MS.gene44069:intron |
| GAGAATGAGGTTGCGGCGTT+TGG | 0.336028 | 1.3:-58028466 | None:intergenic |
| GGTATTGGCAATGCCAAGTT+TGG | 0.347275 | 1.3:-58028367 | None:intergenic |
| ACTTCTCTACTCTGCTGCTT+TGG | 0.355137 | 1.3:+58028492 | MS.gene44069:CDS |
| AGTTCCTGGTACCGTTTCTA+TGG | 0.357344 | 1.3:+58028591 | MS.gene44069:CDS |
| GCTTAAACTCACCTTCTTAG+AGG | 0.363505 | 1.3:+58030116 | MS.gene44069:CDS |
| GTGCCGGAATGAATCTTTAT+GGG | 0.368982 | 1.3:+58029904 | MS.gene44069:CDS |
| AATGCTAGAAAGAATGGATT+CGG | 0.369766 | 1.3:-58028559 | None:intergenic |
| AGCAGCAGAGTAGAGAAGTT+TGG | 0.373628 | 1.3:-58028488 | None:intergenic |
| GTTGCGGCGTTTGGAGGTGG+TGG | 0.376996 | 1.3:-58028457 | None:intergenic |
| GCTGCAAAATTATTTATTCC+AGG | 0.382623 | 1.3:+58030804 | MS.gene44069:CDS |
| TAGTAGGCTCAGGATATAAC+TGG | 0.385822 | 1.3:+58030762 | MS.gene44069:intron |
| CTGTTCTGAATGTTATTACT+CGG | 0.388036 | 1.3:+58030082 | MS.gene44069:CDS |
| GTAGAGAAGTTTGGAGAATG+AGG | 0.401843 | 1.3:-58028479 | None:intergenic |
| TTGCGGCGTTTGGAGGTGGT+GGG | 0.404161 | 1.3:-58028456 | None:intergenic |
| GAAGGATTTGGTGTTGGTAT+TGG | 0.429870 | 1.3:-58028382 | None:intergenic |
| TTATCCACATTTCCCAAACT+TGG | 0.431197 | 1.3:+58028354 | MS.gene44069:CDS |
| AATGAGGTTGCGGCGTTTGG+AGG | 0.435338 | 1.3:-58028463 | None:intergenic |
| TGGTACCGTTTCTATGGTGA+TGG | 0.435901 | 1.3:+58028597 | MS.gene44069:CDS |
| GTATTGGCAATGCCAAGTTT+GGG | 0.449030 | 1.3:-58028366 | None:intergenic |
| GCATTGAAAATACCAGTTCC+TGG | 0.451415 | 1.3:+58028577 | MS.gene44069:CDS |
| GTCCCCATAAAGATTCATTC+CGG | 0.471869 | 1.3:-58029907 | None:intergenic |
| GAGGTTGCGGCGTTTGGAGG+TGG | 0.480230 | 1.3:-58028460 | None:intergenic |
| AACTGGTTTAGCCTCCTTGA+AGG | 0.481925 | 1.3:+58030779 | MS.gene44069:CDS |
| ATAGAAACGGTACCAGGAAC+TGG | 0.489371 | 1.3:-58028589 | None:intergenic |
| ATGCTAGAAAGAATGGATTC+GGG | 0.490973 | 1.3:-58028558 | None:intergenic |
| TGCGGCGTTTGGAGGTGGTG+GGG | 0.491273 | 1.3:-58028455 | None:intergenic |
| GATAAAGCAGGTGGTAGTTG+AGG | 0.499700 | 1.3:-58028531 | None:intergenic |
| GGGAAATGTGGATAAAAGAA+TGG | 0.504323 | 1.3:-58028346 | None:intergenic |
| GAAGGTGAGTTTAAGCTGAC+TGG | 0.508321 | 1.3:-58030109 | None:intergenic |
| GTTGAGGCTGCTACAAATGA+TGG | 0.513227 | 1.3:-58028421 | None:intergenic |
| AAGTTTGGAGAATGAGGTTG+CGG | 0.522919 | 1.3:-58028473 | None:intergenic |
| TACACCATCACTGTCCCACT+TGG | 0.527125 | 1.3:-58031851 | None:intergenic |
| GCACGGTTTGTATCTTCAGA+CGG | 0.529950 | 1.3:+58029954 | MS.gene44069:CDS |
| CTGTCTGATTACCTCTAAGA+AGG | 0.541391 | 1.3:-58030127 | None:intergenic |
| TGATCTGCACTTAGCAGTGA+TGG | 0.544292 | 1.3:+58031381 | MS.gene44069:CDS |
| ATCACCATAGAAACGGTACC+AGG | 0.545907 | 1.3:-58028595 | None:intergenic |
| ACCTGAGTTTCAAGATGTCA+TGG | 0.547354 | 1.3:+58028638 | MS.gene44069:CDS |
| CACGGTTTGTATCTTCAGAC+GGG | 0.552308 | 1.3:+58029955 | MS.gene44069:CDS |
| TGTTCTGAATGTTATTACTC+GGG | 0.553105 | 1.3:+58030083 | MS.gene44069:CDS |
| CTGCACTTAGCAGTGATGGC+AGG | 0.555281 | 1.3:+58031385 | MS.gene44069:CDS |
| CGAAACCATCACCATAGAAA+CGG | 0.556431 | 1.3:-58028602 | None:intergenic |
| TCCATGACATCTTGAAACTC+AGG | 0.557107 | 1.3:-58028639 | None:intergenic |
| GGCAGGCGTACGAGGTGGAA+AGG | 0.562307 | 1.3:+58031402 | MS.gene44069:CDS |
| TCACTGTCCCACTTGGACTG+TGG | 0.576402 | 1.3:-58031844 | None:intergenic |
| GATGATGAAGGATTTGGTGT+TGG | 0.582126 | 1.3:-58028388 | None:intergenic |
| AACTGCACCACAGTCCAAGT+GGG | 0.608052 | 1.3:+58031837 | MS.gene44069:CDS |
| GCAGTGATGGCAGGCGTACG+AGG | 0.618959 | 1.3:+58031394 | MS.gene44069:CDS |
| ATGACATCTTGAAACTCAGG+TGG | 0.623514 | 1.3:-58028636 | None:intergenic |
| TGCCGGAATGAATCTTTATG+GGG | 0.630101 | 1.3:+58029905 | MS.gene44069:CDS |
| CAACTGCACCACAGTCCAAG+TGG | 0.630720 | 1.3:+58031836 | MS.gene44069:CDS |
| CAGTCCAAGTGGGACAGTGA+TGG | 0.630918 | 1.3:+58031847 | MS.gene44069:CDS |
| GATTCGGGTGAAGATAAAGC+AGG | 0.632755 | 1.3:-58028543 | None:intergenic |
| AATGCCAAGTTTGGGAAATG+TGG | 0.632899 | 1.3:-58028358 | None:intergenic |
| AAAATTAAGGAAGCAGCAGG+TGG | 0.633111 | 1.3:+58031031 | MS.gene44069:CDS |
| AAGAGAAGGAAGTTGTCGCA+CGG | 0.636464 | 1.3:+58029937 | MS.gene44069:CDS |
| TTGAGGCTGCTACAAATGAT+GGG | 0.647883 | 1.3:-58028420 | None:intergenic |
| GTGATGGCAGGCGTACGAGG+TGG | 0.650800 | 1.3:+58031397 | MS.gene44069:CDS |
| TCAAGATGTCATGGAACCTG+AGG | 0.659148 | 1.3:+58028647 | MS.gene44069:CDS |
| TGACATCTTGAAACTCAGGT+GGG | 0.665257 | 1.3:-58028635 | None:intergenic |
| TGGGGACAGAGCAAAAGAGA+AGG | 0.666086 | 1.3:+58029923 | MS.gene44069:CDS |
| TCGGGTGAAGATAAAGCAGG+TGG | 0.694918 | 1.3:-58028540 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAAAAATAGAAAATCTA+AGG | - | chr1.3:58030280-58030299 | None:intergenic | 10.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr1.3:58031570-58031589 | None:intergenic | 100.0% |
| !! | ACAATACAATACAAAATCTA+AGG | - | chr1.3:58030315-58030334 | None:intergenic | 20.0% |
| !! | ATATATGTTAGTGCATAATA+AGG | - | chr1.3:58030015-58030034 | None:intergenic | 20.0% |
| !! | TAAATAAGAAAGAAACCAAA+TGG | - | chr1.3:58030365-58030384 | None:intergenic | 20.0% |
| !! | TGCAAGATCAATAAAAATTA+AGG | + | chr1.3:58031018-58031037 | MS.gene44069:CDS | 20.0% |
| !! | TTACAAGATTGAAATTCAAA+AGG | + | chr1.3:58029455-58029474 | MS.gene44069:intron | 20.0% |
| !!! | ACATACTATTTCTATGAATT+TGG | + | chr1.3:58031352-58031371 | MS.gene44069:CDS | 20.0% |
| !!! | CGACATGATAATTTATTTTT+CGG | - | chr1.3:58031787-58031806 | None:intergenic | 20.0% |
| !!! | TTGTTCTAAGTTTATCTTTA+TGG | + | chr1.3:58030858-58030877 | MS.gene44069:intron | 20.0% |
| ! | AAACACTTCTAATACTGTAT+TGG | + | chr1.3:58029506-58029525 | MS.gene44069:intron | 25.0% |
| ! | AAATAAGTGTTTATCCAAAG+AGG | + | chr1.3:58028820-58028839 | MS.gene44069:intron | 25.0% |
| ! | AACACTTATTTGCAACTTAT+AGG | - | chr1.3:58028811-58028830 | None:intergenic | 25.0% |
| ! | AATAAGTGTTTATCCAAAGA+GGG | + | chr1.3:58028821-58028840 | MS.gene44069:intron | 25.0% |
| ! | AATACAATCCAATGAGAATT+TGG | - | chr1.3:58029569-58029588 | None:intergenic | 25.0% |
| ! | AATGTGAAACTTTGCTTTAT+TGG | - | chr1.3:58031527-58031546 | None:intergenic | 25.0% |
| ! | ACTAAAATCCTACAAAGTAA+CGG | - | chr1.3:58029886-58029905 | None:intergenic | 25.0% |
| ! | AGTTCTTGAAAGCAAATAAA+AGG | - | chr1.3:58030429-58030448 | None:intergenic | 25.0% |
| ! | ATTCTATAGGTTATTATTGC+TGG | + | chr1.3:58031811-58031830 | MS.gene44069:intron | 25.0% |
| ! | CTATAAATAAACAGCATTTC+AGG | + | chr1.3:58031177-58031196 | MS.gene44069:intron | 25.0% |
| ! | CTTGTAAATACAGAAATGAT+TGG | - | chr1.3:58031753-58031772 | None:intergenic | 25.0% |
| ! | GGTTGAAAATTTATGCATAA+TGG | - | chr1.3:58030196-58030215 | None:intergenic | 25.0% |
| ! | TACATATTCTTCATTGTAGT+AGG | + | chr1.3:58030746-58030765 | MS.gene44069:intron | 25.0% |
| ! | TATTTGCATGAGAATGATTT+AGG | - | chr1.3:58028847-58028866 | None:intergenic | 25.0% |
| ! | TGAAAATTTATGCATAATGG+AGG | - | chr1.3:58030193-58030212 | None:intergenic | 25.0% |
| ! | TGTCCTGAAATTAGAAAAAT+AGG | - | chr1.3:58031335-58031354 | None:intergenic | 25.0% |
| ! | TTCATGTAAGTTATTAGTTG+TGG | - | chr1.3:58028752-58028771 | None:intergenic | 25.0% |
| ! | TTTAATATCGAGTTATCATC+TGG | + | chr1.3:58030381-58030400 | MS.gene44069:intron | 25.0% |
| !! | AGAAGCATAAATCAAACAAT+AGG | - | chr1.3:58029263-58029282 | None:intergenic | 25.0% |
| !! | ATTTTCAATGCTAGAAAGAA+TGG | - | chr1.3:58028568-58028587 | None:intergenic | 25.0% |
| !! | CATTCTCATGCAAATAATTT+TGG | + | chr1.3:58028851-58028870 | MS.gene44069:intron | 25.0% |
| !! | CTTTTAATCACAATTTCCTA+GGG | + | chr1.3:58028691-58028710 | MS.gene44069:intron | 25.0% |
| !! | GAAAATTTATGCATAATGGA+GGG | - | chr1.3:58030192-58030211 | None:intergenic | 25.0% |
| !! | TATGCATAAATTTTCAACCA+TGG | + | chr1.3:58030197-58030216 | MS.gene44069:intron | 25.0% |
| !! | TCTTTTAATCACAATTTCCT+AGG | + | chr1.3:58028690-58028709 | MS.gene44069:intron | 25.0% |
| !! | TTTTTGTTACAGTTAGATGA+TGG | - | chr1.3:58029635-58029654 | None:intergenic | 25.0% |
| !!! | ATCATGTCGTTTTATTCTAT+AGG | + | chr1.3:58031798-58031817 | MS.gene44069:intron | 25.0% |
| !!! | TGGCATTTTGAGTATAAAAT+AGG | - | chr1.3:58031214-58031233 | None:intergenic | 25.0% |
| !!! | TGTTAGTTTTCTGTTAATTG+AGG | - | chr1.3:58029669-58029688 | None:intergenic | 25.0% |
| !!! | TTTTTCTTGTTATAAGCTCA+AGG | + | chr1.3:58030719-58030738 | MS.gene44069:intron | 25.0% |
| AAACCAAGAATTAGAAGGAA+AGG | - | chr1.3:58030946-58030965 | None:intergenic | 30.0% | |
| AAATGGCAAACAATGAACAA+AGG | - | chr1.3:58030348-58030367 | None:intergenic | 30.0% | |
| AACCAAGAATTAGAAGGAAA+GGG | - | chr1.3:58030945-58030964 | None:intergenic | 30.0% | |
| ACAAGTTATCCAAGAAAAGA+AGG | + | chr1.3:58031148-58031167 | MS.gene44069:intron | 30.0% | |
| AGGAAAAACCAAATTCTCAT+TGG | + | chr1.3:58029558-58029577 | MS.gene44069:intron | 30.0% | |
| AGGAAAAGTTTGCAATAAGA+AGG | - | chr1.3:58030409-58030428 | None:intergenic | 30.0% | |
| ATAAAAATTAAGGAAGCAGC+AGG | + | chr1.3:58031028-58031047 | MS.gene44069:CDS | 30.0% | |
| ATAATCGTTATGAGCAATGA+AGG | - | chr1.3:58029431-58029450 | None:intergenic | 30.0% | |
| ATGATAGCTAAGAACAGATT+TGG | - | chr1.3:58029296-58029315 | None:intergenic | 30.0% | |
| CACTAACATATATGTTCAGA+AGG | + | chr1.3:58030022-58030041 | MS.gene44069:intron | 30.0% | |
| CATTTACGTAACGAAATGAT+GGG | - | chr1.3:58030899-58030918 | None:intergenic | 30.0% | |
| GCTGCAAAATTATTTATTCC+AGG | + | chr1.3:58030804-58030823 | MS.gene44069:CDS | 30.0% | |
| TAACACATCCATATCAAACT+GGG | + | chr1.3:58031445-58031464 | MS.gene44069:intron | 30.0% | |
| TAATAAGGAAGTAGGAAGTT+AGG | - | chr1.3:58030000-58030019 | None:intergenic | 30.0% | |
| TAATCGTTATGAGCAATGAA+GGG | - | chr1.3:58029430-58029449 | None:intergenic | 30.0% | |
| TATTTGCAACTTATAGGACA+AGG | - | chr1.3:58028805-58028824 | None:intergenic | 30.0% | |
| TCATTGCTCATAACGATTAT+AGG | + | chr1.3:58029431-58029450 | MS.gene44069:intron | 30.0% | |
| TCATTTACGTAACGAAATGA+TGG | - | chr1.3:58030900-58030919 | None:intergenic | 30.0% | |
| TTAGTGCATAATAAGGAAGT+AGG | - | chr1.3:58030008-58030027 | None:intergenic | 30.0% | |
| TTATCCAAGAAAAGAAGGTT+TGG | + | chr1.3:58031153-58031172 | MS.gene44069:intron | 30.0% | |
| TTCCTTCTAATTCTTGGTTT+CGG | + | chr1.3:58030946-58030965 | MS.gene44069:intron | 30.0% | |
| TTTGTTCATTGTTTGCCATT+TGG | + | chr1.3:58030347-58030366 | MS.gene44069:intron | 30.0% | |
| ! | AATGCTAGAAAGAATGGATT+CGG | - | chr1.3:58028562-58028581 | None:intergenic | 30.0% |
| ! | ACATGTAGAGTTTTCTATAC+TGG | - | chr1.3:58031234-58031253 | None:intergenic | 30.0% |
| ! | ACTTTGCTTTATTGGTAACT+AGG | - | chr1.3:58031519-58031538 | None:intergenic | 30.0% |
| ! | AGTTTTCTGTTAATTGAGGT+TGG | - | chr1.3:58029665-58029684 | None:intergenic | 30.0% |
| ! | CTGTTCTGAATGTTATTACT+CGG | + | chr1.3:58030082-58030101 | MS.gene44069:CDS | 30.0% |
| ! | TAAGCAATTTTTATGCCATC+TGG | + | chr1.3:58031264-58031283 | MS.gene44069:intron | 30.0% |
| ! | TGTTCTGAATGTTATTACTC+GGG | + | chr1.3:58030083-58030102 | MS.gene44069:CDS | 30.0% |
| ! | TTTATCTTCCGTTACTTTGT+AGG | + | chr1.3:58029875-58029894 | MS.gene44069:intron | 30.0% |
| !! | ATTATGGTTGATTTTCACCA+TGG | + | chr1.3:58029040-58029059 | MS.gene44069:intron | 30.0% |
| !! | GTGCCTATTTTTCTAATTTC+AGG | + | chr1.3:58031329-58031348 | MS.gene44069:intron | 30.0% |
| !!! | CATGCAAATAATTTTGGTTG+TGG | + | chr1.3:58028857-58028876 | MS.gene44069:intron | 30.0% |
| !!! | TTTTGAGATGATGAAGGATT+TGG | - | chr1.3:58028397-58028416 | None:intergenic | 30.0% |
| AAATACCAAACACTAAGCCA+TGG | - | chr1.3:58030217-58030236 | None:intergenic | 35.0% | |
| AATCGTTATGAGCAATGAAG+GGG | - | chr1.3:58029429-58029448 | None:intergenic | 35.0% | |
| ACCTATGCATTCACATTACA+TGG | - | chr1.3:58030253-58030272 | None:intergenic | 35.0% | |
| AGAATTGAATGTAGTACCTC+AGG | - | chr1.3:58028666-58028685 | None:intergenic | 35.0% | |
| ATAGATCATTCAGCAAGTCT+CGG | + | chr1.3:58029129-58029148 | MS.gene44069:intron | 35.0% | |
| ATCTATGTTAGAGTGACTTG+AGG | - | chr1.3:58030678-58030697 | None:intergenic | 35.0% | |
| CAGCTAATCTGTTACAATCA+TGG | - | chr1.3:58030065-58030084 | None:intergenic | 35.0% | |
| CTAACACATCCATATCAAAC+TGG | + | chr1.3:58031444-58031463 | MS.gene44069:intron | 35.0% | |
| CTTGCTGAATGATCTATAAG+AGG | - | chr1.3:58029126-58029145 | None:intergenic | 35.0% | |
| GAGAATTTACAAATTGCACC+TGG | - | chr1.3:58030825-58030844 | None:intergenic | 35.0% | |
| GAGGTTTAAATTGACAAAGC+AGG | - | chr1.3:58029107-58029126 | None:intergenic | 35.0% | |
| GCAAAGTTCTTTCTTGAGTT+GGG | + | chr1.3:58029071-58029090 | MS.gene44069:intron | 35.0% | |
| GCTTATGTCTTCAAGAACTT+AGG | + | chr1.3:58030493-58030512 | MS.gene44069:intron | 35.0% | |
| GGGAAATGTGGATAAAAGAA+TGG | - | chr1.3:58028349-58028368 | None:intergenic | 35.0% | |
| GTAATGTGAATGCATAGGTT+TGG | + | chr1.3:58030254-58030273 | MS.gene44069:intron | 35.0% | |
| GTCATAACTACGAGTAATGA+TGG | + | chr1.3:58029594-58029613 | MS.gene44069:intron | 35.0% | |
| TCATCTCTAGCAGCTAATTA+TGG | + | chr1.3:58029024-58029043 | MS.gene44069:intron | 35.0% | |
| TCCACCATCAAAATTCACAT+CGG | - | chr1.3:58031669-58031688 | None:intergenic | 35.0% | |
| TCCATGTAATGTGAATGCAT+AGG | + | chr1.3:58030249-58030268 | MS.gene44069:intron | 35.0% | |
| TCGAATAAGTCAATCCAAAC+AGG | - | chr1.3:58028717-58028736 | None:intergenic | 35.0% | |
| TCTTCTTGTATCCCTTTAAC+AGG | - | chr1.3:58029393-58029412 | None:intergenic | 35.0% | |
| TGATCTGTCTAATGAACTGT+TGG | + | chr1.3:58029781-58029800 | MS.gene44069:intron | 35.0% | |
| TGCAAAGTTCTTTCTTGAGT+TGG | + | chr1.3:58029070-58029089 | MS.gene44069:intron | 35.0% | |
| TGCTTTCAAGAACTTAGACT+GGG | + | chr1.3:58030435-58030454 | MS.gene44069:intron | 35.0% | |
| TTATCCACATTTCCCAAACT+TGG | + | chr1.3:58028354-58028373 | MS.gene44069:CDS | 35.0% | |
| TTCCCTTTCCTTCTAATTCT+TGG | + | chr1.3:58030940-58030959 | MS.gene44069:intron | 35.0% | |
| TTGCTTTCAAGAACTTAGAC+TGG | + | chr1.3:58030434-58030453 | MS.gene44069:intron | 35.0% | |
| TTTGTCATCGCTAAAGACAA+TGG | - | chr1.3:58028948-58028967 | None:intergenic | 35.0% | |
| ! | ATGCTAGAAAGAATGGATTC+GGG | - | chr1.3:58028561-58028580 | None:intergenic | 35.0% |
| ! | TAATTTTGCAGCATCCTTCA+AGG | - | chr1.3:58030796-58030815 | None:intergenic | 35.0% |
| ! | TAGAAAAATAGGCACTGCTT+TGG | - | chr1.3:58031324-58031343 | None:intergenic | 35.0% |
| ! | TAGACCAAACCTTCTTTTCT+TGG | - | chr1.3:58031160-58031179 | None:intergenic | 35.0% |
| !! | ACTTTGTAGGATTTTAGTGC+CGG | + | chr1.3:58029888-58029907 | MS.gene44069:intron | 35.0% |
| AAAATTAAGGAAGCAGCAGG+TGG | + | chr1.3:58031031-58031050 | MS.gene44069:CDS | 40.0% | |
| AAGTTTGGAGAATGAGGTTG+CGG | - | chr1.3:58028476-58028495 | None:intergenic | 40.0% | |
| AATGCCAAGTTTGGGAAATG+TGG | - | chr1.3:58028361-58028380 | None:intergenic | 40.0% | |
| AATGCCCAACCTACTATGTA+TGG | - | chr1.3:58029231-58029250 | None:intergenic | 40.0% | |
| ACCTGAGTTTCAAGATGTCA+TGG | + | chr1.3:58028638-58028657 | MS.gene44069:CDS | 40.0% | |
| ACTGCATACCCAGTTTGATA+TGG | - | chr1.3:58031456-58031475 | None:intergenic | 40.0% | |
| AGAATGATTTAGGCCCTCTT+TGG | - | chr1.3:58028837-58028856 | None:intergenic | 40.0% | |
| ATGACATCTTGAAACTCAGG+TGG | - | chr1.3:58028639-58028658 | None:intergenic | 40.0% | |
| ATGCCCAACCTACTATGTAT+GGG | - | chr1.3:58029230-58029249 | None:intergenic | 40.0% | |
| ATGTCTTCAAGAACTTAGGC+TGG | + | chr1.3:58030497-58030516 | MS.gene44069:intron | 40.0% | |
| ATTGAGCTCCCATACATAGT+AGG | + | chr1.3:58029219-58029238 | MS.gene44069:intron | 40.0% | |
| ATTGGTATGTATCACCCGTT+TGG | - | chr1.3:58031735-58031754 | None:intergenic | 40.0% | |
| CACCGAAACCAAGAATTAGA+AGG | - | chr1.3:58030951-58030970 | None:intergenic | 40.0% | |
| CAGGTGACATTTACAGATCT+TGG | - | chr1.3:58029339-58029358 | None:intergenic | 40.0% | |
| CAGTACCAGGGTTATATCAT+AGG | + | chr1.3:58031472-58031491 | MS.gene44069:intron | 40.0% | |
| CCATCAAAATTCACATCGGA+CGG | - | chr1.3:58031665-58031684 | None:intergenic | 40.0% | |
| CGAAACCATCACCATAGAAA+CGG | - | chr1.3:58028605-58028624 | None:intergenic | 40.0% | |
| CGCAAATCAAGACATAAGCA+AGG | - | chr1.3:58030555-58030574 | None:intergenic | 40.0% | |
| CTAGGGTATGTTTGAATTGG+TGG | + | chr1.3:58028973-58028992 | MS.gene44069:intron | 40.0% | |
| CTAGGTCAACTAGCAAAAGT+TGG | - | chr1.3:58031501-58031520 | None:intergenic | 40.0% | |
| CTTGAGGCATAAAAACCCAA+TGG | - | chr1.3:58030662-58030681 | None:intergenic | 40.0% | |
| GACTCTTGCAGTGATTTCTT+TGG | + | chr1.3:58029161-58029180 | MS.gene44069:intron | 40.0% | |
| GCACTAGGGTATGTTTGAAT+TGG | + | chr1.3:58028970-58028989 | MS.gene44069:intron | 40.0% | |
| GCAGACTAATGACAAATCGA+GGG | + | chr1.3:58029532-58029551 | MS.gene44069:intron | 40.0% | |
| GCATTCACATTACATGGACT+TGG | - | chr1.3:58030247-58030266 | None:intergenic | 40.0% | |
| GCATTGAAAATACCAGTTCC+TGG | + | chr1.3:58028577-58028596 | MS.gene44069:CDS | 40.0% | |
| GCTTAAACTCACCTTCTTAG+AGG | + | chr1.3:58030116-58030135 | MS.gene44069:CDS | 40.0% | |
| GTAGAGAAGTTTGGAGAATG+AGG | - | chr1.3:58028482-58028501 | None:intergenic | 40.0% | |
| GTCCCCATAAAGATTCATTC+CGG | - | chr1.3:58029910-58029929 | None:intergenic | 40.0% | |
| GTGACATTTACAGATCTTGG+AGG | - | chr1.3:58029336-58029355 | None:intergenic | 40.0% | |
| GTGCCGGAATGAATCTTTAT+GGG | + | chr1.3:58029904-58029923 | MS.gene44069:CDS | 40.0% | |
| TAATGACAAATCGAGGGAGA+AGG | + | chr1.3:58029538-58029557 | MS.gene44069:intron | 40.0% | |
| TAGAGGTAATCAGACAGTCA+AGG | + | chr1.3:58030133-58030152 | MS.gene44069:intron | 40.0% | |
| TAGATCATTCAGCAAGTCTC+GGG | + | chr1.3:58029130-58029149 | MS.gene44069:intron | 40.0% | |
| TAGCTATCATTCCATGCACA+TGG | + | chr1.3:58029306-58029325 | MS.gene44069:intron | 40.0% | |
| TAGTAGGCTCAGGATATAAC+TGG | + | chr1.3:58030762-58030781 | MS.gene44069:intron | 40.0% | |
| TCCATGACATCTTGAAACTC+AGG | - | chr1.3:58028642-58028661 | None:intergenic | 40.0% | |
| TGACATCTTGAAACTCAGGT+GGG | - | chr1.3:58028638-58028657 | None:intergenic | 40.0% | |
| TGCAGACTAATGACAAATCG+AGG | + | chr1.3:58029531-58029550 | MS.gene44069:intron | 40.0% | |
| TGCCGGAATGAATCTTTATG+GGG | + | chr1.3:58029905-58029924 | MS.gene44069:CDS | 40.0% | |
| TGTGTATGTATCAGTGCCAT+TGG | + | chr1.3:58030643-58030662 | MS.gene44069:intron | 40.0% | |
| TTCAACCATGGCTTAGTGTT+TGG | + | chr1.3:58030209-58030228 | MS.gene44069:intron | 40.0% | |
| TTCTTCATTGTAGTAGGCTC+AGG | + | chr1.3:58030752-58030771 | MS.gene44069:intron | 40.0% | |
| TTGAGGCTGCTACAAATGAT+GGG | - | chr1.3:58028423-58028442 | None:intergenic | 40.0% | |
| ! | AGTGCCGGAATGAATCTTTA+TGG | + | chr1.3:58029903-58029922 | MS.gene44069:CDS | 40.0% |
| ! | CTGTCTGATTACCTCTAAGA+AGG | - | chr1.3:58030130-58030149 | None:intergenic | 40.0% |
| ! | GTATTGGCAATGCCAAGTTT+GGG | - | chr1.3:58028369-58028388 | None:intergenic | 40.0% |
| ! | GTGTATGTATCAGTGCCATT+GGG | + | chr1.3:58030644-58030663 | MS.gene44069:intron | 40.0% |
| !! | ACGGATTCAGCGAGTTTTAA+TGG | - | chr1.3:58031646-58031665 | None:intergenic | 40.0% |
| !! | ATTGGTGGTGTAGTCTAGTT+AGG | + | chr1.3:58028988-58029007 | MS.gene44069:intron | 40.0% |
| !! | GAAGGATTTGGTGTTGGTAT+TGG | - | chr1.3:58028385-58028404 | None:intergenic | 40.0% |
| !! | GATGATGAAGGATTTGGTGT+TGG | - | chr1.3:58028391-58028410 | None:intergenic | 40.0% |
| !! | TCCGATGTGAATTTTGATGG+TGG | + | chr1.3:58031665-58031684 | MS.gene44069:intron | 40.0% |
| !! | TTCTTGAGTTGGGAAGTTTG+AGG | + | chr1.3:58029081-58029100 | MS.gene44069:intron | 40.0% |
| !! | TTGGTGGTGTAGTCTAGTTA+GGG | + | chr1.3:58028989-58029008 | MS.gene44069:intron | 40.0% |
| !!! | AGGCACTGCTTTGGAATTTT+GGG | - | chr1.3:58031315-58031334 | None:intergenic | 40.0% |
| !!! | GGGTACTTTTGAGATGATGA+AGG | - | chr1.3:58028403-58028422 | None:intergenic | 40.0% |
| !!! | TAGGCACTGCTTTGGAATTT+TGG | - | chr1.3:58031316-58031335 | None:intergenic | 40.0% |
| AAACTGGGTATGCAGTACCA+GGG | + | chr1.3:58031460-58031479 | MS.gene44069:intron | 45.0% | |
| AACTCAGTAGCAGATCCAGA+TGG | - | chr1.3:58031282-58031301 | None:intergenic | 45.0% | |
| AAGAGAAGGAAGTTGTCGCA+CGG | + | chr1.3:58029937-58029956 | MS.gene44069:CDS | 45.0% | |
| ACAAGCCAAGGCCTGTTAAA+GGG | + | chr1.3:58029379-58029398 | MS.gene44069:intron | 45.0% | |
| ACAATTTCCTAGGGCCTGTT+TGG | + | chr1.3:58028700-58028719 | MS.gene44069:intron | 45.0% | |
| ACACACGCACATGTTCTTCT+TGG | - | chr1.3:58030622-58030641 | None:intergenic | 45.0% | |
| AGCAGCAGAGTAGAGAAGTT+TGG | - | chr1.3:58028491-58028510 | None:intergenic | 45.0% | |
| AGCGATGACAAACTGCACTA+GGG | + | chr1.3:58028956-58028975 | MS.gene44069:intron | 45.0% | |
| AGCTCCCATACATAGTAGGT+TGG | + | chr1.3:58029223-58029242 | MS.gene44069:intron | 45.0% | |
| AGTGAGTGTTTCACATGAGG+GGG | + | chr1.3:58031603-58031622 | MS.gene44069:intron | 45.0% | |
| AGTTCCTGGTACCGTTTCTA+TGG | + | chr1.3:58028591-58028610 | MS.gene44069:CDS | 45.0% | |
| ATAGAAACGGTACCAGGAAC+TGG | - | chr1.3:58028592-58028611 | None:intergenic | 45.0% | |
| ATCACCATAGAAACGGTACC+AGG | - | chr1.3:58028598-58028617 | None:intergenic | 45.0% | |
| ATGTGAAACACTCACTCGAG+GGG | - | chr1.3:58031599-58031618 | None:intergenic | 45.0% | |
| CACGGTTTGTATCTTCAGAC+GGG | + | chr1.3:58029955-58029974 | MS.gene44069:CDS | 45.0% | |
| CATGTGAAACACTCACTCGA+GGG | - | chr1.3:58031600-58031619 | None:intergenic | 45.0% | |
| CCACACAAGGTAATCCAAAC+GGG | + | chr1.3:58031718-58031737 | MS.gene44069:intron | 45.0% | |
| CCCACACAAGGTAATCCAAA+CGG | + | chr1.3:58031717-58031736 | MS.gene44069:intron | 45.0% | |
| CCGTTTGGATTACCTTGTGT+GGG | - | chr1.3:58031720-58031739 | None:intergenic | 45.0% | |
| CGAGTGAGTGTTTCACATGA+GGG | + | chr1.3:58031601-58031620 | MS.gene44069:intron | 45.0% | |
| CGTTTGGATTACCTTGTGTG+GGG | - | chr1.3:58031719-58031738 | None:intergenic | 45.0% | |
| CTGTAAATGTCACCTGCCAA+GGG | + | chr1.3:58029343-58029362 | MS.gene44069:intron | 45.0% | |
| GAACTTTGCAAACGCAACCA+TGG | - | chr1.3:58029060-58029079 | None:intergenic | 45.0% | |
| GAAGGTGAGTTTAAGCTGAC+TGG | - | chr1.3:58030112-58030131 | None:intergenic | 45.0% | |
| GAGTGAGTGTTTCACATGAG+GGG | + | chr1.3:58031602-58031621 | MS.gene44069:intron | 45.0% | |
| GATAAAGCAGGTGGTAGTTG+AGG | - | chr1.3:58028534-58028553 | None:intergenic | 45.0% | |
| GATTCGGGTGAAGATAAAGC+AGG | - | chr1.3:58028546-58028565 | None:intergenic | 45.0% | |
| GCACGGTTTGTATCTTCAGA+CGG | + | chr1.3:58029954-58029973 | MS.gene44069:CDS | 45.0% | |
| GCTCCCATACATAGTAGGTT+GGG | + | chr1.3:58029224-58029243 | MS.gene44069:intron | 45.0% | |
| GGTGACCTATGATATAACCC+TGG | - | chr1.3:58031480-58031499 | None:intergenic | 45.0% | |
| GTGTGGGGATTTCACATGAT+GGG | - | chr1.3:58031704-58031723 | None:intergenic | 45.0% | |
| GTTGAGGCTGCTACAAATGA+TGG | - | chr1.3:58028424-58028443 | None:intergenic | 45.0% | |
| TACAAGCCAAGGCCTGTTAA+AGG | + | chr1.3:58029378-58029397 | MS.gene44069:intron | 45.0% | |
| TAGCGATGACAAACTGCACT+AGG | + | chr1.3:58028955-58028974 | MS.gene44069:intron | 45.0% | |
| TCAAGATGTCATGGAACCTG+AGG | + | chr1.3:58028647-58028666 | MS.gene44069:CDS | 45.0% | |
| TCATGTGAAACACTCACTCG+AGG | - | chr1.3:58031601-58031620 | None:intergenic | 45.0% | |
| TCATGTGAAATCCCCACACA+AGG | + | chr1.3:58031705-58031724 | MS.gene44069:intron | 45.0% | |
| TCGAGTGAGTGTTTCACATG+AGG | + | chr1.3:58031600-58031619 | MS.gene44069:intron | 45.0% | |
| TCTGTAAATGTCACCTGCCA+AGG | + | chr1.3:58029342-58029361 | MS.gene44069:intron | 45.0% | |
| TGAGACACAAGTACAAGCCA+AGG | + | chr1.3:58029367-58029386 | MS.gene44069:intron | 45.0% | |
| TGATCTGCACTTAGCAGTGA+TGG | + | chr1.3:58031381-58031400 | MS.gene44069:CDS | 45.0% | |
| TGGTACCGTTTCTATGGTGA+TGG | + | chr1.3:58028597-58028616 | MS.gene44069:CDS | 45.0% | |
| TGTATCCCTTTAACAGGCCT+TGG | - | chr1.3:58029387-58029406 | None:intergenic | 45.0% | |
| TGTGTGGGGATTTCACATGA+TGG | - | chr1.3:58031705-58031724 | None:intergenic | 45.0% | |
| TTTGCCCACAATGTACATGC+AGG | + | chr1.3:58030977-58030996 | MS.gene44069:intron | 45.0% | |
| ! | AACTGGTTTAGCCTCCTTGA+AGG | + | chr1.3:58030779-58030798 | MS.gene44069:CDS | 45.0% |
| ! | ACTTCTCTACTCTGCTGCTT+TGG | + | chr1.3:58028492-58028511 | MS.gene44069:CDS | 45.0% |
| ! | CCGTCCGATGTGAATTTTGA+TGG | + | chr1.3:58031662-58031681 | MS.gene44069:intron | 45.0% |
| ! | TGGGGTTGTTGTTGTTGTTG+AGG | - | chr1.3:58028440-58028459 | None:intergenic | 45.0% |
| ! | TTTTGCAGCATCCTTCAAGG+AGG | - | chr1.3:58030793-58030812 | None:intergenic | 45.0% |
| !! | GGTATTGGCAATGCCAAGTT+TGG | - | chr1.3:58028370-58028389 | None:intergenic | 45.0% |
| !! | TCACATGATGGGTCAAGTAG+AGG | - | chr1.3:58031693-58031712 | None:intergenic | 45.0% |
| !!! | GCTTTGGAATTTTGGGGCAA+CGG | - | chr1.3:58031308-58031327 | None:intergenic | 45.0% |
| !!! | GGCACTGCTTTGGAATTTTG+GGG | - | chr1.3:58031314-58031333 | None:intergenic | 45.0% |
| AACTGCACCACAGTCCAAGT+GGG | + | chr1.3:58031837-58031856 | MS.gene44069:CDS | 50.0% | |
| ACCCTCCTGCATGTACATTG+TGG | - | chr1.3:58030985-58031004 | None:intergenic | 50.0% | |
| AGTCAATCCAAACAGGCCCT+AGG | - | chr1.3:58028710-58028729 | None:intergenic | 50.0% | |
| CAAACTGGGTATGCAGTACC+AGG | + | chr1.3:58031459-58031478 | MS.gene44069:intron | 50.0% | |
| CCCACAATGTACATGCAGGA+GGG | + | chr1.3:58030981-58031000 | MS.gene44069:intron | 50.0% | |
| CCCGTTTGGATTACCTTGTG+TGG | - | chr1.3:58031721-58031740 | None:intergenic | 50.0% | |
| CCCTCCTGCATGTACATTGT+GGG | - | chr1.3:58030984-58031003 | None:intergenic | 50.0% | |
| TACACCATCACTGTCCCACT+TGG | - | chr1.3:58031854-58031873 | None:intergenic | 50.0% | |
| TCGGGTGAAGATAAAGCAGG+TGG | - | chr1.3:58028543-58028562 | None:intergenic | 50.0% | |
| TGGGGACAGAGCAAAAGAGA+AGG | + | chr1.3:58029923-58029942 | MS.gene44069:CDS | 50.0% | |
| TGTACTTGTGTCTCAGCCCT+TGG | - | chr1.3:58029362-58029381 | None:intergenic | 50.0% | |
| TGTGAAACACTCACTCGAGG+GGG | - | chr1.3:58031598-58031617 | None:intergenic | 50.0% | |
| ! | AGGAAGCAGCAGGTGGTTTT+AGG | + | chr1.3:58031038-58031057 | MS.gene44069:CDS | 50.0% |
| AATGAGGTTGCGGCGTTTGG+AGG | - | chr1.3:58028466-58028485 | None:intergenic | 55.0% | |
| CAACTGCACCACAGTCCAAG+TGG | + | chr1.3:58031836-58031855 | MS.gene44069:CDS | 55.0% | |
| CAGTCCAAGTGGGACAGTGA+TGG | + | chr1.3:58031847-58031866 | MS.gene44069:CDS | 55.0% | |
| CTGCACTTAGCAGTGATGGC+AGG | + | chr1.3:58031385-58031404 | MS.gene44069:CDS | 55.0% | |
| GAGAATGAGGTTGCGGCGTT+TGG | - | chr1.3:58028469-58028488 | None:intergenic | 55.0% | |
| GCCCACAATGTACATGCAGG+AGG | + | chr1.3:58030980-58030999 | MS.gene44069:intron | 55.0% | |
| GTGAAACACTCACTCGAGGG+GGG | - | chr1.3:58031597-58031616 | None:intergenic | 55.0% | |
| TCACTGTCCCACTTGGACTG+TGG | - | chr1.3:58031847-58031866 | None:intergenic | 55.0% | |
| TGAAACACTCACTCGAGGGG+GGG | - | chr1.3:58031596-58031615 | None:intergenic | 55.0% | |
| TTGGAGGAGAGCCATGTGCA+TGG | - | chr1.3:58029320-58029339 | None:intergenic | 55.0% | |
| TTTCACATGAGGGGGTCAGC+TGG | + | chr1.3:58031611-58031630 | MS.gene44069:intron | 55.0% | |
| AAACACTCACTCGAGGGGGG+GGG | - | chr1.3:58031594-58031613 | None:intergenic | 60.0% | |
| CTTGTGTCTCAGCCCTTGGC+AGG | - | chr1.3:58029358-58029377 | None:intergenic | 60.0% | |
| GAAACACTCACTCGAGGGGG+GGG | - | chr1.3:58031595-58031614 | None:intergenic | 60.0% | |
| TTGCGGCGTTTGGAGGTGGT+GGG | - | chr1.3:58028459-58028478 | None:intergenic | 60.0% | |
| AACACTCACTCGAGGGGGGG+GGG | - | chr1.3:58031593-58031612 | None:intergenic | 65.0% | |
| AGGGGGTCAGCTGGAGGATC+TGG | + | chr1.3:58031620-58031639 | MS.gene44069:intron | 65.0% | |
| CACATGAGGGGGTCAGCTGG+AGG | + | chr1.3:58031614-58031633 | MS.gene44069:intron | 65.0% | |
| GAGGTTGCGGCGTTTGGAGG+TGG | - | chr1.3:58028463-58028482 | None:intergenic | 65.0% | |
| GCAGTGATGGCAGGCGTACG+AGG | + | chr1.3:58031394-58031413 | MS.gene44069:CDS | 65.0% | |
| GGCAGGCGTACGAGGTGGAA+AGG | + | chr1.3:58031402-58031421 | MS.gene44069:CDS | 65.0% | |
| GTGATGGCAGGCGTACGAGG+TGG | + | chr1.3:58031397-58031416 | MS.gene44069:CDS | 65.0% | |
| GTTGCGGCGTTTGGAGGTGG+TGG | - | chr1.3:58028460-58028479 | None:intergenic | 65.0% | |
| TGCGGCGTTTGGAGGTGGTG+GGG | - | chr1.3:58028458-58028477 | None:intergenic | 65.0% | |
| ACACTCACTCGAGGGGGGGG+GGG | - | chr1.3:58031592-58031611 | None:intergenic | 70.0% | |
| ACTCACTCGAGGGGGGGGGG+GGG | - | chr1.3:58031590-58031609 | None:intergenic | 75.0% | |
| CACTCACTCGAGGGGGGGGG+GGG | - | chr1.3:58031591-58031610 | None:intergenic | 75.0% | |
| ! | CTCACTCGAGGGGGGGGGGG+GGG | - | chr1.3:58031589-58031608 | None:intergenic | 80.0% |
| ! | TCACTCGAGGGGGGGGGGGG+GGG | - | chr1.3:58031588-58031607 | None:intergenic | 80.0% |
| ! | ACTCGAGGGGGGGGGGGGGG+GGG | - | chr1.3:58031586-58031605 | None:intergenic | 85.0% |
| ! | CACTCGAGGGGGGGGGGGGG+GGG | - | chr1.3:58031587-58031606 | None:intergenic | 85.0% |
| ! | CTCGAGGGGGGGGGGGGGGG+GGG | - | chr1.3:58031585-58031604 | None:intergenic | 90.0% |
| ! | TCGAGGGGGGGGGGGGGGGG+GGG | - | chr1.3:58031584-58031603 | None:intergenic | 90.0% |
| ! | AGGGGGGGGGGGGGGGGGGG+GGG | - | chr1.3:58031581-58031600 | None:intergenic | 95.0% |
| ! | CGAGGGGGGGGGGGGGGGGG+GGG | - | chr1.3:58031583-58031602 | None:intergenic | 95.0% |
| ! | GAGGGGGGGGGGGGGGGGGG+GGG | - | chr1.3:58031582-58031601 | None:intergenic | 95.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 58028342 | 58031912 | 58028342 | ID=MS.gene44069 |
| chr1.3 | mRNA | 58028342 | 58031912 | 58028342 | ID=MS.gene44069.t1;Parent=MS.gene44069 |
| chr1.3 | exon | 58028342 | 58028668 | 58028342 | ID=MS.gene44069.t1.exon1;Parent=MS.gene44069.t1 |
| chr1.3 | CDS | 58028342 | 58028668 | 58028342 | ID=cds.MS.gene44069.t1;Parent=MS.gene44069.t1 |
| chr1.3 | exon | 58029897 | 58029976 | 58029897 | ID=MS.gene44069.t1.exon2;Parent=MS.gene44069.t1 |
| chr1.3 | CDS | 58029897 | 58029976 | 58029897 | ID=cds.MS.gene44069.t1;Parent=MS.gene44069.t1 |
| chr1.3 | exon | 58030077 | 58030137 | 58030077 | ID=MS.gene44069.t1.exon3;Parent=MS.gene44069.t1 |
| chr1.3 | CDS | 58030077 | 58030137 | 58030077 | ID=cds.MS.gene44069.t1;Parent=MS.gene44069.t1 |
| chr1.3 | exon | 58030768 | 58030825 | 58030768 | ID=MS.gene44069.t1.exon4;Parent=MS.gene44069.t1 |
| chr1.3 | CDS | 58030768 | 58030825 | 58030768 | ID=cds.MS.gene44069.t1;Parent=MS.gene44069.t1 |
| chr1.3 | exon | 58030999 | 58031059 | 58030999 | ID=MS.gene44069.t1.exon5;Parent=MS.gene44069.t1 |
| chr1.3 | CDS | 58030999 | 58031059 | 58030999 | ID=cds.MS.gene44069.t1;Parent=MS.gene44069.t1 |
| chr1.3 | exon | 58031351 | 58031423 | 58031351 | ID=MS.gene44069.t1.exon6;Parent=MS.gene44069.t1 |
| chr1.3 | CDS | 58031351 | 58031423 | 58031351 | ID=cds.MS.gene44069.t1;Parent=MS.gene44069.t1 |
| chr1.3 | exon | 58031820 | 58031912 | 58031820 | ID=MS.gene44069.t1.exon7;Parent=MS.gene44069.t1 |
| chr1.3 | CDS | 58031820 | 58031912 | 58031820 | ID=cds.MS.gene44069.t1;Parent=MS.gene44069.t1 |
| Gene Sequence |
| Protein sequence |
