Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46340.t1 | XP_003608621.1 | 98.9 | 186 | 2 | 0 | 1 | 186 | 1 | 186 | 9.50E-102 | 379.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46340.t1 | Q9C7Y4 | 68.0 | 181 | 56 | 1 | 6 | 186 | 3 | 181 | 2.1e-65 | 250.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46340.t1 | G7JGG5 | 98.9 | 186 | 2 | 0 | 1 | 186 | 1 | 186 | 6.9e-102 | 379.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049217 | MS.gene46340 | 0.813911 | 2.01E-51 | -1.69E-46 |
| MS.gene049222 | MS.gene46340 | 0.812327 | 4.48E-51 | -1.69E-46 |
| MS.gene049285 | MS.gene46340 | 0.806414 | 8.32E-50 | -1.69E-46 |
| MS.gene049351 | MS.gene46340 | 0.800781 | 1.23E-48 | -1.69E-46 |
| MS.gene049356 | MS.gene46340 | 0.802515 | 5.41E-49 | -1.69E-46 |
| MS.gene049369 | MS.gene46340 | 0.810125 | 1.35E-50 | -1.69E-46 |
| MS.gene049427 | MS.gene46340 | 0.812422 | 4.27E-51 | -1.69E-46 |
| MS.gene049609 | MS.gene46340 | 0.813572 | 2.39E-51 | -1.69E-46 |
| MS.gene049614 | MS.gene46340 | 0.806946 | 6.43E-50 | -1.69E-46 |
| MS.gene049805 | MS.gene46340 | 0.809138 | 2.19E-50 | -1.69E-46 |
| MS.gene050432 | MS.gene46340 | 0.852023 | 6.06E-61 | -1.69E-46 |
| MS.gene050520 | MS.gene46340 | 0.807758 | 4.32E-50 | -1.69E-46 |
| MS.gene050538 | MS.gene46340 | 0.803506 | 3.38E-49 | -1.69E-46 |
| MS.gene050593 | MS.gene46340 | 0.817892 | 2.60E-52 | -1.69E-46 |
| MS.gene050767 | MS.gene46340 | 0.844742 | 6.26E-59 | -1.69E-46 |
| MS.gene050770 | MS.gene46340 | 0.849484 | 3.14E-60 | -1.69E-46 |
| MS.gene050772 | MS.gene46340 | 0.831028 | 2.10E-55 | -1.69E-46 |
| MS.gene05080 | MS.gene46340 | 0.807759 | 4.32E-50 | -1.69E-46 |
| MS.gene05105 | MS.gene46340 | 0.81559 | 8.55E-52 | -1.69E-46 |
| MS.gene051228 | MS.gene46340 | 0.876628 | 1.20E-68 | -1.69E-46 |
| MS.gene051387 | MS.gene46340 | 0.800221 | 1.60E-48 | -1.69E-46 |
| MS.gene051617 | MS.gene46340 | 0.827249 | 1.74E-54 | -1.69E-46 |
| MS.gene051666 | MS.gene46340 | 0.826681 | 2.37E-54 | -1.69E-46 |
| MS.gene051694 | MS.gene46340 | 0.802431 | 5.63E-49 | -1.69E-46 |
| MS.gene051810 | MS.gene46340 | 0.822298 | 2.55E-53 | -1.69E-46 |
| MS.gene051858 | MS.gene46340 | 0.811028 | 8.59E-51 | -1.69E-46 |
| MS.gene052078 | MS.gene46340 | 0.800216 | 1.60E-48 | -1.69E-46 |
| MS.gene052188 | MS.gene46340 | 0.815229 | 1.03E-51 | -1.69E-46 |
| MS.gene052271 | MS.gene46340 | 0.801004 | 1.10E-48 | -1.69E-46 |
| MS.gene052290 | MS.gene46340 | 0.825707 | 4.05E-54 | -1.69E-46 |
| MS.gene052310 | MS.gene46340 | 0.817224 | 3.68E-52 | -1.69E-46 |
| MS.gene052379 | MS.gene46340 | 0.852062 | 5.91E-61 | -1.69E-46 |
| MS.gene052484 | MS.gene46340 | 0.824671 | 7.11E-54 | -1.69E-46 |
| MS.gene052510 | MS.gene46340 | 0.80115 | 1.03E-48 | -1.69E-46 |
| MS.gene052870 | MS.gene46340 | 0.85837 | 8.63E-63 | -1.69E-46 |
| MS.gene052872 | MS.gene46340 | 0.847554 | 1.07E-59 | -1.69E-46 |
| MS.gene053009 | MS.gene46340 | 0.84465 | 6.63E-59 | -1.69E-46 |
| MS.gene053103 | MS.gene46340 | 0.81591 | 7.25E-52 | -1.69E-46 |
| MS.gene053104 | MS.gene46340 | 0.843211 | 1.61E-58 | -1.69E-46 |
| MS.gene053107 | MS.gene46340 | 0.809727 | 1.64E-50 | -1.69E-46 |
| MS.gene053207 | MS.gene46340 | 0.840061 | 1.09E-57 | -1.69E-46 |
| MS.gene053209 | MS.gene46340 | 0.859203 | 4.87E-63 | -1.69E-46 |
| MS.gene053322 | MS.gene46340 | 0.834321 | 3.21E-56 | -1.69E-46 |
| MS.gene053384 | MS.gene46340 | 0.833062 | 6.62E-56 | -1.69E-46 |
| MS.gene053632 | MS.gene46340 | 0.817218 | 3.70E-52 | -1.69E-46 |
| MS.gene053916 | MS.gene46340 | 0.830736 | 2.48E-55 | -1.69E-46 |
| MS.gene054123 | MS.gene46340 | 0.80812 | 3.62E-50 | -1.69E-46 |
| MS.gene054376 | MS.gene46340 | 0.826998 | 1.99E-54 | -1.69E-46 |
| MS.gene054600 | MS.gene46340 | 0.813224 | 2.85E-51 | -1.69E-46 |
| MS.gene054642 | MS.gene46340 | 0.828402 | 9.17E-55 | -1.69E-46 |
| MS.gene054802 | MS.gene46340 | 0.805946 | 1.04E-49 | -1.69E-46 |
| MS.gene054803 | MS.gene46340 | 0.800958 | 1.13E-48 | -1.69E-46 |
| MS.gene054804 | MS.gene46340 | 0.808291 | 3.33E-50 | -1.69E-46 |
| MS.gene05494 | MS.gene46340 | 0.802428 | 5.64E-49 | -1.69E-46 |
| MS.gene05505 | MS.gene46340 | 0.840208 | 9.98E-58 | -1.69E-46 |
| MS.gene055206 | MS.gene46340 | 0.835646 | 1.49E-56 | -1.69E-46 |
| MS.gene055254 | MS.gene46340 | 0.832408 | 9.61E-56 | -1.69E-46 |
| MS.gene055277 | MS.gene46340 | 0.825931 | 3.58E-54 | -1.69E-46 |
| MS.gene055397 | MS.gene46340 | 0.836305 | 1.01E-56 | -1.69E-46 |
| MS.gene055412 | MS.gene46340 | 0.807458 | 5.01E-50 | -1.69E-46 |
| MS.gene055499 | MS.gene46340 | 0.803426 | 3.51E-49 | -1.69E-46 |
| MS.gene055577 | MS.gene46340 | 0.824942 | 6.14E-54 | -1.69E-46 |
| MS.gene055636 | MS.gene46340 | 0.815106 | 1.10E-51 | -1.69E-46 |
| MS.gene055647 | MS.gene46340 | 0.80988 | 1.52E-50 | -1.69E-46 |
| MS.gene055722 | MS.gene46340 | 0.847333 | 1.24E-59 | -1.69E-46 |
| MS.gene05592 | MS.gene46340 | 0.860653 | 1.78E-63 | -1.69E-46 |
| MS.gene055941 | MS.gene46340 | 0.820262 | 7.53E-53 | -1.69E-46 |
| MS.gene056374 | MS.gene46340 | 0.800799 | 1.22E-48 | -1.69E-46 |
| MS.gene056410 | MS.gene46340 | 0.826628 | 2.44E-54 | -1.69E-46 |
| MS.gene056609 | MS.gene46340 | 0.85158 | 8.09E-61 | -1.69E-46 |
| MS.gene056796 | MS.gene46340 | 0.820559 | 6.43E-53 | -1.69E-46 |
| MS.gene056897 | MS.gene46340 | 0.846855 | 1.67E-59 | -1.69E-46 |
| MS.gene056947 | MS.gene46340 | 0.817953 | 2.52E-52 | -1.69E-46 |
| MS.gene057011 | MS.gene46340 | 0.813686 | 2.26E-51 | -1.69E-46 |
| MS.gene057124 | MS.gene46340 | 0.806272 | 8.92E-50 | -1.69E-46 |
| MS.gene057129 | MS.gene46340 | 0.849307 | 3.52E-60 | -1.69E-46 |
| MS.gene057331 | MS.gene46340 | 0.848145 | 7.39E-60 | -1.69E-46 |
| MS.gene05735 | MS.gene46340 | 0.828373 | 9.32E-55 | -1.69E-46 |
| MS.gene057416 | MS.gene46340 | 0.815785 | 7.74E-52 | -1.69E-46 |
| MS.gene057926 | MS.gene46340 | 0.846575 | 1.99E-59 | -1.69E-46 |
| MS.gene058006 | MS.gene46340 | 0.806727 | 7.15E-50 | -1.69E-46 |
| MS.gene058082 | MS.gene46340 | 0.842997 | 1.84E-58 | -1.69E-46 |
| MS.gene058293 | MS.gene46340 | 0.838973 | 2.09E-57 | -1.69E-46 |
| MS.gene058323 | MS.gene46340 | 0.846593 | 1.97E-59 | -1.69E-46 |
| MS.gene058660 | MS.gene46340 | 0.813938 | 1.99E-51 | -1.69E-46 |
| MS.gene058723 | MS.gene46340 | 0.828381 | 9.28E-55 | -1.69E-46 |
| MS.gene058748 | MS.gene46340 | 0.820366 | 7.13E-53 | -1.69E-46 |
| MS.gene058773 | MS.gene46340 | 0.822793 | 1.96E-53 | -1.69E-46 |
| MS.gene059029 | MS.gene46340 | 0.827412 | 1.59E-54 | -1.69E-46 |
| MS.gene05934 | MS.gene46340 | 0.810078 | 1.38E-50 | -1.69E-46 |
| MS.gene059536 | MS.gene46340 | 0.8135 | 2.48E-51 | -1.69E-46 |
| MS.gene05959 | MS.gene46340 | 0.809326 | 2.00E-50 | -1.69E-46 |
| MS.gene059676 | MS.gene46340 | 0.842844 | 2.02E-58 | -1.69E-46 |
| MS.gene059688 | MS.gene46340 | 0.826572 | 2.52E-54 | -1.69E-46 |
| MS.gene059692 | MS.gene46340 | 0.833842 | 4.23E-56 | -1.69E-46 |
| MS.gene059695 | MS.gene46340 | 0.83261 | 8.57E-56 | -1.69E-46 |
| MS.gene059711 | MS.gene46340 | 0.828207 | 1.02E-54 | -1.69E-46 |
| MS.gene059718 | MS.gene46340 | 0.820023 | 8.54E-53 | -1.69E-46 |
| MS.gene05986 | MS.gene46340 | 0.822615 | 2.15E-53 | -1.69E-46 |
| MS.gene059902 | MS.gene46340 | 0.803317 | 3.69E-49 | -1.69E-46 |
| MS.gene059960 | MS.gene46340 | 0.852678 | 3.94E-61 | -1.69E-46 |
| MS.gene060193 | MS.gene46340 | 0.80595 | 1.04E-49 | -1.69E-46 |
| MS.gene060804 | MS.gene46340 | 0.855093 | 7.95E-62 | -1.69E-46 |
| MS.gene060818 | MS.gene46340 | 0.865117 | 7.45E-65 | -1.69E-46 |
| MS.gene060837 | MS.gene46340 | 0.839636 | 1.41E-57 | -1.69E-46 |
| MS.gene06092 | MS.gene46340 | 0.818021 | 2.44E-52 | -1.69E-46 |
| MS.gene061041 | MS.gene46340 | 0.833527 | 5.07E-56 | -1.69E-46 |
| MS.gene061051 | MS.gene46340 | -0.830719 | 2.51E-55 | -1.69E-46 |
| MS.gene061150 | MS.gene46340 | 0.812441 | 4.23E-51 | -1.69E-46 |
| MS.gene061200 | MS.gene46340 | 0.840566 | 8.05E-58 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46340.t1 | MTR_4g098490 | 98.925 | 186 | 2 | 0 | 1 | 186 | 1 | 186 | 1.18e-138 | 384 |
| MS.gene46340.t1 | MTR_1g112030 | 39.535 | 86 | 52 | 0 | 74 | 159 | 71 | 156 | 1.07e-18 | 79.0 |
| MS.gene46340.t1 | MTR_1g112030 | 39.535 | 86 | 52 | 0 | 74 | 159 | 75 | 160 | 1.09e-18 | 79.0 |
| MS.gene46340.t1 | MTR_4g053120 | 29.452 | 146 | 100 | 1 | 14 | 159 | 13 | 155 | 1.56e-17 | 75.9 |
| MS.gene46340.t1 | MTR_2g006290 | 40.244 | 82 | 49 | 0 | 77 | 158 | 67 | 148 | 2.19e-17 | 75.5 |
| MS.gene46340.t1 | MTR_1g112050 | 38.824 | 85 | 52 | 0 | 74 | 158 | 69 | 153 | 2.21e-17 | 75.5 |
| MS.gene46340.t1 | MTR_8g088720 | 36.585 | 82 | 52 | 0 | 77 | 158 | 65 | 146 | 1.41e-16 | 73.2 |
| MS.gene46340.t1 | MTR_2g086510 | 33.721 | 86 | 57 | 0 | 74 | 159 | 70 | 155 | 2.04e-15 | 70.5 |
| MS.gene46340.t1 | MTR_5g006320 | 31.373 | 102 | 67 | 2 | 63 | 164 | 51 | 149 | 1.19e-12 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46340.t1 | AT1G32550 | 67.956 | 181 | 56 | 1 | 6 | 186 | 3 | 181 | 3.63e-87 | 254 |
| MS.gene46340.t1 | AT1G32550 | 61.421 | 197 | 55 | 3 | 6 | 186 | 3 | 194 | 6.52e-80 | 236 |
| MS.gene46340.t1 | AT2G27510 | 40.244 | 82 | 49 | 0 | 78 | 159 | 74 | 155 | 3.18e-17 | 75.1 |
| MS.gene46340.t1 | AT1G10960 | 38.667 | 75 | 46 | 0 | 84 | 158 | 73 | 147 | 6.10e-15 | 68.9 |
| MS.gene46340.t1 | AT1G60950 | 30.702 | 114 | 67 | 2 | 54 | 158 | 37 | 147 | 2.60e-14 | 67.4 |
Find 50 sgRNAs with CRISPR-Local
Find 305 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCGGCTTTGTATTAATAAA+TGG | 0.191613 | 8.4:+24473378 | None:intergenic |
| CCCTTGACTCACAGGTATAT+TGG | 0.273197 | 8.4:-24469101 | MS.gene46340:intron |
| CAGGTATATTGGCTTCAATT+TGG | 0.291335 | 8.4:-24469090 | MS.gene46340:CDS |
| TCTACTTCAAGATCAGAGTA+TGG | 0.311983 | 8.4:+24470810 | None:intergenic |
| TAACGGAAGCAAACGATTAC+CGG | 0.393000 | 8.4:-24473284 | MS.gene46340:CDS |
| AATCGAACAACAACTACTAC+TGG | 0.397418 | 8.4:+24473401 | None:intergenic |
| TTACCCTTCCATTCGCCTGC+AGG | 0.464055 | 8.4:-24473033 | MS.gene46340:CDS |
| GCAGATATCCCAAGTGCCTC+TGG | 0.465646 | 8.4:+24471726 | None:intergenic |
| TGCGCTGTTCGTATAAAGAA+TGG | 0.468923 | 8.4:-24471762 | MS.gene46340:CDS |
| ACGTACCTGCTCTCTCAATT+CGG | 0.472163 | 8.4:+24471704 | None:intergenic |
| CTTCCATTCGCCTGCAGGCA+TGG | 0.476506 | 8.4:-24473028 | MS.gene46340:intron |
| CAGCAGTATGCAATATATAC+TGG | 0.486651 | 8.4:+24473068 | None:intergenic |
| GTCGACGGTGGCAGCAGCGA+CGG | 0.493828 | 8.4:-24473328 | MS.gene46340:CDS |
| TGGCGATGCTCCAACTCATA+AGG | 0.500302 | 8.4:-24473253 | MS.gene46340:CDS |
| ATTAAACAGCCAGAGGCACT+TGG | 0.500897 | 8.4:-24471735 | MS.gene46340:CDS |
| TACTACTGGGAATTCGAAGA+AGG | 0.516293 | 8.4:+24473415 | None:intergenic |
| TTTGCTTCCGTTAGTCTCAC+CGG | 0.521493 | 8.4:+24473294 | None:intergenic |
| CTGCTGCCACCGTCGACTTG+CGG | 0.523336 | 8.4:+24473334 | None:intergenic |
| GCGCTGTTCGTATAAAGAAT+GGG | 0.523958 | 8.4:-24471761 | MS.gene46340:CDS |
| AGATGATTACGCCTTGGAGT+TGG | 0.525321 | 8.4:-24468940 | MS.gene46340:CDS |
| TGCCACCGTCGACTTGCGGA+GGG | 0.528786 | 8.4:+24473338 | None:intergenic |
| GAGCATCGCCACTAGGATAC+CGG | 0.533955 | 8.4:+24473265 | None:intergenic |
| TTACGCCTTGGAGTTGGCCA+TGG | 0.537209 | 8.4:-24468934 | MS.gene46340:CDS |
| CTGCCACCGTCGACTTGCGG+AGG | 0.539461 | 8.4:+24473337 | None:intergenic |
| CATGCCTGCAGGCGAATGGA+AGG | 0.545098 | 8.4:+24473029 | None:intergenic |
| CTACTTCAAGATCAGAGTAT+GGG | 0.545399 | 8.4:+24470811 | None:intergenic |
| AAAGTAAGTACCATGCCTGC+AGG | 0.550244 | 8.4:+24473018 | None:intergenic |
| GTACCATGCCTGCAGGCGAA+TGG | 0.551891 | 8.4:+24473025 | None:intergenic |
| TAATTCAAACCTCAGGTACA+AGG | 0.558777 | 8.4:+24473190 | None:intergenic |
| ATCTGCCGAATTGAGAGAGC+AGG | 0.560872 | 8.4:-24471709 | MS.gene46340:intron |
| GGAAAGAGATGATTACGCCT+TGG | 0.577081 | 8.4:-24468946 | MS.gene46340:CDS |
| GCCTGCTTACTCGTCACCCA+TGG | 0.581117 | 8.4:+24468917 | None:intergenic |
| TACGCCTTGGAGTTGGCCAT+GGG | 0.581629 | 8.4:-24468933 | MS.gene46340:CDS |
| ATCGAACAACAACTACTACT+GGG | 0.588470 | 8.4:+24473402 | None:intergenic |
| GTCACCCATGGCCAACTCCA+AGG | 0.593375 | 8.4:+24468929 | None:intergenic |
| ACTACTGGGAATTCGAAGAA+GGG | 0.593926 | 8.4:+24473416 | None:intergenic |
| AGCGACGGAGCTTCGAACGC+CGG | 0.596711 | 8.4:-24473313 | MS.gene46340:CDS |
| TCACGAATTCCTTGTACCTG+AGG | 0.597412 | 8.4:-24473199 | MS.gene46340:intron |
| TAAAACCCTCCGCAAGTCGA+CGG | 0.598675 | 8.4:-24473343 | MS.gene46340:CDS |
| TGAGTTGGAGCATCGCCACT+AGG | 0.600465 | 8.4:+24473258 | None:intergenic |
| TTAAACAGCCAGAGGCACTT+GGG | 0.610944 | 8.4:-24471734 | MS.gene46340:CDS |
| AACGATTACCGGTATCCTAG+TGG | 0.614364 | 8.4:-24473273 | MS.gene46340:CDS |
| TCGAACGCCGGTGAGACTAA+CGG | 0.630013 | 8.4:-24473301 | MS.gene46340:CDS |
| AGAAACTCAAGATGAAGATG+AGG | 0.630393 | 8.4:-24470790 | MS.gene46340:intron |
| CTACTGGGAATTCGAAGAAG+GGG | 0.636238 | 8.4:+24473417 | None:intergenic |
| AACCCTCCGCAAGTCGACGG+TGG | 0.642319 | 8.4:-24473340 | MS.gene46340:CDS |
| ATGCCTGCAGGCGAATGGAA+GGG | 0.644285 | 8.4:+24473030 | None:intergenic |
| TGGGAAAATTAAACAGCCAG+AGG | 0.663643 | 8.4:-24471742 | MS.gene46340:CDS |
| TGAACTGTGACCTTATGAGT+TGG | 0.666810 | 8.4:+24473243 | None:intergenic |
| ACAGTTCACGATAGACAACG+AGG | 0.785544 | 8.4:-24473228 | MS.gene46340:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAGAAATAAAATGAATA+AGG | + | chr8.4:24471818-24471837 | None:intergenic | 10.0% |
| !! | AAATTGAATCTATATATAAT+TGG | + | chr8.4:24470323-24470342 | None:intergenic | 10.0% |
| !! | ATTATGATTTATTCAAATTT+AGG | - | chr8.4:24472479-24472498 | MS.gene46340:intron | 10.0% |
| !!! | TATTTTTTTCAATTTTCATT+AGG | - | chr8.4:24470222-24470241 | MS.gene46340:intron | 10.0% |
| !! | AAATATTCAAGAATATTCAA+AGG | + | chr8.4:24471726-24471745 | None:intergenic | 15.0% |
| !! | ATAAAAAAAGTTCATAAACA+TGG | + | chr8.4:24470675-24470694 | None:intergenic | 15.0% |
| !! | ATAACATGTATAAAGTATAA+TGG | + | chr8.4:24470872-24470891 | None:intergenic | 15.0% |
| !! | ATACTAAAACAAATTAAACA+TGG | + | chr8.4:24471846-24471865 | None:intergenic | 15.0% |
| !! | CAATTCAATAAAATAGTTTA+AGG | + | chr8.4:24469599-24469618 | None:intergenic | 15.0% |
| !! | TATGTTAAAAATATCAAACT+TGG | + | chr8.4:24470186-24470205 | None:intergenic | 15.0% |
| !! | TTCAAATTTAGGAATTATTT+AGG | - | chr8.4:24472490-24472509 | MS.gene46340:intron | 15.0% |
| !!! | ATATAATTTGTGTGTTAAAA+AGG | + | chr8.4:24473380-24473399 | None:intergenic | 15.0% |
| !!! | ATATTCTTGAATATTTTACA+CGG | - | chr8.4:24471730-24471749 | MS.gene46340:CDS | 15.0% |
| !!! | ATGAACTTTTTTTATTGAAT+CGG | - | chr8.4:24470680-24470699 | MS.gene46340:intron | 15.0% |
| !!! | TAATCATAACTTTCATTTTA+TGG | - | chr8.4:24471597-24471616 | MS.gene46340:intron | 15.0% |
| !!! | TATATTGATGTTTTATTCTT+TGG | + | chr8.4:24470000-24470019 | None:intergenic | 15.0% |
| !! | AAAACAAAACCAAATATGAT+AGG | + | chr8.4:24470269-24470288 | None:intergenic | 20.0% |
| !! | AATATACAAACAATCATAAG+AGG | + | chr8.4:24471222-24471241 | None:intergenic | 20.0% |
| !! | ACTATTCTAATCAAATATTG+TGG | - | chr8.4:24473003-24473022 | MS.gene46340:intron | 20.0% |
| !! | CACATTAACATTGATATATA+CGG | + | chr8.4:24469238-24469257 | None:intergenic | 20.0% |
| !! | TATATATAATTGGTAGGTAA+GGG | + | chr8.4:24470313-24470332 | None:intergenic | 20.0% |
| !! | TGAATCTATATATAATTGGT+AGG | + | chr8.4:24470319-24470338 | None:intergenic | 20.0% |
| !! | TTAACACACAAATTATATAC+AGG | - | chr8.4:24473382-24473401 | MS.gene46340:CDS | 20.0% |
| !!! | AAAAAACACGTATATACTTT+TGG | + | chr8.4:24471099-24471118 | None:intergenic | 20.0% |
| !!! | AAAAACACGTATATACTTTT+GGG | + | chr8.4:24471098-24471117 | None:intergenic | 20.0% |
| !!! | AGTATATACGTGTTTTTTTT+TGG | - | chr8.4:24471101-24471120 | MS.gene46340:intron | 20.0% |
| !!! | ATGGATTTTCATATACTTTA+GGG | - | chr8.4:24470053-24470072 | MS.gene46340:intron | 20.0% |
| !!! | TATTTGATACTTTTTATGGT+AGG | - | chr8.4:24470551-24470570 | MS.gene46340:intron | 20.0% |
| !!! | TCATATTATTTTCTTTCTTC+TGG | - | chr8.4:24472977-24472996 | MS.gene46340:intron | 20.0% |
| !!! | TCGTATTATTTTCATATGTT+GGG | + | chr8.4:24472867-24472886 | None:intergenic | 20.0% |
| !!! | TGCTTATTTGATACTTTTTA+TGG | - | chr8.4:24470547-24470566 | MS.gene46340:intron | 20.0% |
| !!! | TTACATTTTGATTTCTTTGT+TGG | - | chr8.4:24471242-24471261 | MS.gene46340:intron | 20.0% |
| !!! | TTCAATTTTCATTAGGTTAT+TGG | - | chr8.4:24470229-24470248 | MS.gene46340:intron | 20.0% |
| !!! | TTTCCATATGTAATTTGTAA+TGG | - | chr8.4:24470287-24470306 | MS.gene46340:intron | 20.0% |
| !!! | TTTTATGAACCTATCATATT+TGG | - | chr8.4:24470257-24470276 | MS.gene46340:intron | 20.0% |
| ! | AAAAATATCAAACTTGGTAC+TGG | + | chr8.4:24470180-24470199 | None:intergenic | 25.0% |
| ! | AAAATATCTCACATTACTTC+TGG | - | chr8.4:24471696-24471715 | MS.gene46340:intron | 25.0% |
| ! | AACTAGTTATTATGGCTTAT+GGG | - | chr8.4:24470107-24470126 | MS.gene46340:intron | 25.0% |
| ! | AATAAAGTAAACTTGTAGAC+AGG | + | chr8.4:24470998-24471017 | None:intergenic | 25.0% |
| ! | AATATGACTTTCAAAAAGCA+AGG | + | chr8.4:24471888-24471907 | None:intergenic | 25.0% |
| ! | AATGTGAACATGTTTAGTAT+TGG | + | chr8.4:24470964-24470983 | None:intergenic | 25.0% |
| ! | AGCTAAACAAGGAAATAATT+AGG | + | chr8.4:24472518-24472537 | None:intergenic | 25.0% |
| ! | ATATGACTTTCAAAAAGCAA+GGG | + | chr8.4:24471887-24471906 | None:intergenic | 25.0% |
| ! | ATCAAATAAGCAACCAAATA+AGG | + | chr8.4:24470539-24470558 | None:intergenic | 25.0% |
| ! | ATCCAGAATGAATGATATAA+AGG | - | chr8.4:24472696-24472715 | MS.gene46340:intron | 25.0% |
| ! | ATTGTGGTTGATTATTTAAC+CGG | - | chr8.4:24473019-24473038 | MS.gene46340:intron | 25.0% |
| ! | CAAACATATATCAATCTAGA+GGG | + | chr8.4:24470493-24470512 | None:intergenic | 25.0% |
| ! | CCTAATTCAATAGTTATATG+AGG | + | chr8.4:24469405-24469424 | None:intergenic | 25.0% |
| ! | CCTCATATAACTATTGAATT+AGG | - | chr8.4:24469402-24469421 | MS.gene46340:intron | 25.0% |
| ! | CTATATATAATTGGTAGGTA+AGG | + | chr8.4:24470314-24470333 | None:intergenic | 25.0% |
| ! | GTTATCACTGAAATTATTGT+TGG | + | chr8.4:24472266-24472285 | None:intergenic | 25.0% |
| ! | GTTTACTTTATTCATTTGAC+AGG | - | chr8.4:24471006-24471025 | MS.gene46340:intron | 25.0% |
| ! | TAAACATGGAAATCAAATCA+AGG | + | chr8.4:24472347-24472366 | None:intergenic | 25.0% |
| ! | TACATGTTATTATAGAGTAG+AGG | - | chr8.4:24470882-24470901 | MS.gene46340:intron | 25.0% |
| ! | TCCAGAATGAATGATATAAA+GGG | - | chr8.4:24472697-24472716 | MS.gene46340:intron | 25.0% |
| ! | TGTCAATGCAAAACAAAAAT+AGG | + | chr8.4:24471974-24471993 | None:intergenic | 25.0% |
| ! | TTATAAATAAGAGAAGACCA+AGG | + | chr8.4:24469904-24469923 | None:intergenic | 25.0% |
| ! | TTGAATGAGTACAATAAAGA+AGG | - | chr8.4:24469797-24469816 | MS.gene46340:intron | 25.0% |
| ! | TTTCAAGATTAGAATGAGAA+TGG | + | chr8.4:24470821-24470840 | None:intergenic | 25.0% |
| !! | GTCGTATTATTTTCATATGT+TGG | + | chr8.4:24472868-24472887 | None:intergenic | 25.0% |
| !! | TAACTACTATAGTGGAAAAA+GGG | + | chr8.4:24471377-24471396 | None:intergenic | 25.0% |
| !! | TGGATTTTCATATACTTTAG+GGG | - | chr8.4:24470054-24470073 | MS.gene46340:intron | 25.0% |
| !! | TTAACTACTATAGTGGAAAA+AGG | + | chr8.4:24471378-24471397 | None:intergenic | 25.0% |
| !! | TTGTTGATTAGATGACTAAT+TGG | + | chr8.4:24471777-24471796 | None:intergenic | 25.0% |
| !! | TTGTTGGTGTTTCAATTTAA+GGG | - | chr8.4:24471258-24471277 | MS.gene46340:intron | 25.0% |
| !! | TTTGTTCCATTTCATTTTCA+GGG | - | chr8.4:24471491-24471510 | MS.gene46340:intron | 25.0% |
| !! | TTTGTTGGTGTTTCAATTTA+AGG | - | chr8.4:24471257-24471276 | MS.gene46340:intron | 25.0% |
| !! | TTTTGTTCCATTTCATTTTC+AGG | - | chr8.4:24471490-24471509 | MS.gene46340:intron | 25.0% |
| !!! | ACATGTTTTCTTTGATAATG+TGG | - | chr8.4:24473354-24473373 | MS.gene46340:CDS | 25.0% |
| !!! | ATCAATACTCTAGTTTTCTT+TGG | - | chr8.4:24472041-24472060 | MS.gene46340:intron | 25.0% |
| !!! | CGCATTCATATTTTAATAAC+TGG | + | chr8.4:24471133-24471152 | None:intergenic | 25.0% |
| !!! | GATGGATTTTCATATACTTT+AGG | - | chr8.4:24470052-24470071 | MS.gene46340:intron | 25.0% |
| !!! | TAAACTATGTTGTGTTTTTG+AGG | - | chr8.4:24473168-24473187 | MS.gene46340:intron | 25.0% |
| !!! | TGAAAGATCATTACTGATTT+TGG | - | chr8.4:24472433-24472452 | MS.gene46340:intron | 25.0% |
| AAAAAATATCCTCTCTCCTA+CGG | + | chr8.4:24470210-24470229 | None:intergenic | 30.0% | |
| AAATATCTTCGTTCTGTTGT+AGG | + | chr8.4:24471315-24471334 | None:intergenic | 30.0% | |
| AAATTTATCTTCCCTCCTAT+TGG | - | chr8.4:24470389-24470408 | MS.gene46340:intron | 30.0% | |
| AACAGAGAAATAAGAGACAT+TGG | + | chr8.4:24471453-24471472 | None:intergenic | 30.0% | |
| AAGAGGAAAACTGATAAACA+TGG | + | chr8.4:24472361-24472380 | None:intergenic | 30.0% | |
| AATATCTTCGTTCTGTTGTA+GGG | + | chr8.4:24471314-24471333 | None:intergenic | 30.0% | |
| AATGAATGATATAAAGGGAG+AGG | - | chr8.4:24472702-24472721 | MS.gene46340:intron | 30.0% | |
| AATGAGTCAAAGAGCTTAAA+GGG | + | chr8.4:24469955-24469974 | None:intergenic | 30.0% | |
| AATTAGAGAGAATCTAGAGA+AGG | - | chr8.4:24469823-24469842 | MS.gene46340:intron | 30.0% | |
| AATTTATCTTCCCTCCTATT+GGG | - | chr8.4:24470390-24470409 | MS.gene46340:intron | 30.0% | |
| AGATGATTAATTCAAACCTC+AGG | + | chr8.4:24469169-24469188 | None:intergenic | 30.0% | |
| AGGCAGTAATTTGAAAAAGA+TGG | - | chr8.4:24469472-24469491 | MS.gene46340:intron | 30.0% | |
| ATCCATGTATAGTTGAAGTA+CGG | - | chr8.4:24470344-24470363 | MS.gene46340:intron | 30.0% | |
| ATGAATGATATAAAGGGAGA+GGG | - | chr8.4:24472703-24472722 | MS.gene46340:intron | 30.0% | |
| ATGTTATTATAGAGTAGAGG+AGG | - | chr8.4:24470885-24470904 | MS.gene46340:intron | 30.0% | |
| ATTAGGAAGTTTCAAACAAG+AGG | + | chr8.4:24472378-24472397 | None:intergenic | 30.0% | |
| ATTGGAGGGAATAATAGTTT+AGG | - | chr8.4:24470134-24470153 | MS.gene46340:intron | 30.0% | |
| CAATATGGGAAATATGAATG+TGG | + | chr8.4:24469931-24469950 | None:intergenic | 30.0% | |
| CACCATTACAATTCATTAGT+GGG | + | chr8.4:24472295-24472314 | None:intergenic | 30.0% | |
| CAGGAAATAAGACATTGAAT+TGG | - | chr8.4:24471025-24471044 | MS.gene46340:intron | 30.0% | |
| CCAAACATATATCAATCTAG+AGG | + | chr8.4:24470494-24470513 | None:intergenic | 30.0% | |
| CCTCTAGATTGATATATGTT+TGG | - | chr8.4:24470491-24470510 | MS.gene46340:intron | 30.0% | |
| CTAATCAACAAAGCAATCTT+AGG | - | chr8.4:24471786-24471805 | MS.gene46340:intron | 30.0% | |
| CTTAACTACTTGTTTGTGTT+AGG | + | chr8.4:24471285-24471304 | None:intergenic | 30.0% | |
| GAAATTTCAGAGCAAGTTAA+AGG | + | chr8.4:24472937-24472956 | None:intergenic | 30.0% | |
| GAACTAGTTATTATGGCTTA+TGG | - | chr8.4:24470106-24470125 | MS.gene46340:intron | 30.0% | |
| GTAGTTGTTAACTACTATAG+TGG | + | chr8.4:24471385-24471404 | None:intergenic | 30.0% | |
| TAATGAGTCAAAGAGCTTAA+AGG | + | chr8.4:24469956-24469975 | None:intergenic | 30.0% | |
| TACTGTAAGAGACCTTAAAA+TGG | - | chr8.4:24469565-24469584 | MS.gene46340:intron | 30.0% | |
| TAGATCATGTAATGCATCAT+TGG | - | chr8.4:24470440-24470459 | MS.gene46340:intron | 30.0% | |
| TAGTTTAGGGACTAAATTGA+TGG | - | chr8.4:24470148-24470167 | MS.gene46340:intron | 30.0% | |
| TATAGTAGTTAACAACTACG+AGG | - | chr8.4:24471386-24471405 | MS.gene46340:intron | 30.0% | |
| TATCATTCATTCTGGATAGT+AGG | + | chr8.4:24472693-24472712 | None:intergenic | 30.0% | |
| TCAAGAAATTACACACAACA+AGG | + | chr8.4:24472416-24472435 | None:intergenic | 30.0% | |
| TCACCATTACAATTCATTAG+TGG | + | chr8.4:24472296-24472315 | None:intergenic | 30.0% | |
| TCCCTTTATATCATTCATTC+TGG | + | chr8.4:24472701-24472720 | None:intergenic | 30.0% | |
| TCTCTGCTATTAAGATGTTA+GGG | - | chr8.4:24470021-24470040 | MS.gene46340:intron | 30.0% | |
| TGCTTAGTGATGATTTGATT+TGG | + | chr8.4:24471641-24471660 | None:intergenic | 30.0% | |
| TTCCCACTAATGAATTGTAA+TGG | - | chr8.4:24472290-24472309 | MS.gene46340:intron | 30.0% | |
| TTCTATTAAATGTGTCCATC+CGG | + | chr8.4:24471935-24471954 | None:intergenic | 30.0% | |
| TTCTTTAGCATCATTGAAGA+TGG | + | chr8.4:24470779-24470798 | None:intergenic | 30.0% | |
| TTGAAAAAGATGGAAGTGAT+TGG | - | chr8.4:24469482-24469501 | MS.gene46340:intron | 30.0% | |
| TTGAAAGTCATATTAGACTC+AGG | - | chr8.4:24471894-24471913 | MS.gene46340:intron | 30.0% | |
| TTGGAGGGAATAATAGTTTA+GGG | - | chr8.4:24470135-24470154 | MS.gene46340:intron | 30.0% | |
| TTTGACTCATTATAGCTACA+TGG | - | chr8.4:24469964-24469983 | MS.gene46340:intron | 30.0% | |
| ! | AAGGATTCTACTCCATTTTA+AGG | + | chr8.4:24469580-24469599 | None:intergenic | 30.0% |
| ! | AATGTCTCTTATTTCTCTGT+TGG | - | chr8.4:24471452-24471471 | MS.gene46340:intron | 30.0% |
| ! | AGTAATGTGAGATATTTTGC+AGG | + | chr8.4:24471694-24471713 | None:intergenic | 30.0% |
| ! | GAATATTTTACACGGTCTTT+AGG | - | chr8.4:24471738-24471757 | MS.gene46340:CDS | 30.0% |
| ! | GACAGATTTTCATATGCTTT+AGG | - | chr8.4:24470084-24470103 | MS.gene46340:intron | 30.0% |
| ! | TCTTTGTTTGTATGCTATTG+TGG | - | chr8.4:24472164-24472183 | MS.gene46340:intron | 30.0% |
| ! | TGAGAGCATATTGAGAAAAA+AGG | + | chr8.4:24472117-24472136 | None:intergenic | 30.0% |
| ! | TGCGGCTTTGTATTAATAAA+TGG | + | chr8.4:24468974-24468993 | None:intergenic | 30.0% |
| ! | TTTTCTACACATTCAACATC+TGG | + | chr8.4:24469207-24469226 | None:intergenic | 30.0% |
| !! | ACTGATTTTGGTCAAATGAT+CGG | - | chr8.4:24472445-24472464 | MS.gene46340:intron | 30.0% |
| !! | CGAAGATATTTTTCAGCTTA+TGG | - | chr8.4:24471324-24471343 | MS.gene46340:intron | 30.0% |
| !! | GATATTTTTAACATACCCGT+AGG | - | chr8.4:24470191-24470210 | MS.gene46340:intron | 30.0% |
| !! | GCTTTAGGAACTAGTTATTA+TGG | - | chr8.4:24470099-24470118 | MS.gene46340:intron | 30.0% |
| !! | TCTACTCAAACTCATTTTTC+TGG | - | chr8.4:24471190-24471209 | MS.gene46340:intron | 30.0% |
| !!! | TTGGTTTTGTAATGTTAGCA+TGG | - | chr8.4:24472187-24472206 | MS.gene46340:intron | 30.0% |
| !!! | TTGGTTTTTTATGCTATTCC+TGG | - | chr8.4:24470510-24470529 | MS.gene46340:intron | 30.0% |
| !!! | TTGTTGGCTTTTCTATTTGT+TGG | - | chr8.4:24471999-24472018 | MS.gene46340:intron | 30.0% |
| AAAAATATCCTCTCTCCTAC+GGG | + | chr8.4:24470209-24470228 | None:intergenic | 35.0% | |
| AAGCTGTGTTTCTTTGTACT+CGG | - | chr8.4:24472640-24472659 | MS.gene46340:intron | 35.0% | |
| AATCGAACAACAACTACTAC+TGG | + | chr8.4:24468951-24468970 | None:intergenic | 35.0% | |
| ACACAACATACTGTCTATAG+AGG | - | chr8.4:24472788-24472807 | MS.gene46340:intron | 35.0% | |
| ACACTAACTCCTTATTGCAA+GGG | - | chr8.4:24472886-24472905 | MS.gene46340:intron | 35.0% | |
| AGAAACACAGCTTATACATG+AGG | + | chr8.4:24472633-24472652 | None:intergenic | 35.0% | |
| AGAAACTCAAGATGAAGATG+AGG | - | chr8.4:24471559-24471578 | MS.gene46340:intron | 35.0% | |
| ATAGGTCCTAAAACAAACCA+TGG | - | chr8.4:24472832-24472851 | MS.gene46340:intron | 35.0% | |
| ATCCGTACTTCAACTATACA+TGG | + | chr8.4:24470349-24470368 | None:intergenic | 35.0% | |
| ATCGAACAACAACTACTACT+GGG | + | chr8.4:24468950-24468969 | None:intergenic | 35.0% | |
| ATGAGTCAAAGAGCTTAAAG+GGG | + | chr8.4:24469954-24469973 | None:intergenic | 35.0% | |
| ATGCATTACATGATCTACAC+AGG | + | chr8.4:24470437-24470456 | None:intergenic | 35.0% | |
| CAAAAAGCAAGGGTTTCAAA+AGG | + | chr8.4:24471877-24471896 | None:intergenic | 35.0% | |
| CAAGGGTTTCAAAAGGAAAA+AGG | + | chr8.4:24471870-24471889 | None:intergenic | 35.0% | |
| CAGCAGTATGCAATATATAC+TGG | + | chr8.4:24469284-24469303 | None:intergenic | 35.0% | |
| CATCATTGAAGATGGTTGAT+GGG | + | chr8.4:24470771-24470790 | None:intergenic | 35.0% | |
| CTACTTCAAGATCAGAGTAT+GGG | + | chr8.4:24471541-24471560 | None:intergenic | 35.0% | |
| CTATTCCTGGTTTCCTTATT+TGG | - | chr8.4:24470523-24470542 | MS.gene46340:intron | 35.0% | |
| CTTAGTAAGAGTCAACTTGA+GGG | - | chr8.4:24473071-24473090 | MS.gene46340:CDS | 35.0% | |
| CTTCAATGATGCTAAAGAAG+AGG | - | chr8.4:24470780-24470799 | MS.gene46340:intron | 35.0% | |
| GCATAACCCTGAAAATGAAA+TGG | + | chr8.4:24471500-24471519 | None:intergenic | 35.0% | |
| GCTCTCTAGATATCAGATTT+GGG | - | chr8.4:24472541-24472560 | MS.gene46340:intron | 35.0% | |
| GGGCCATTACAAATTACATA+TGG | + | chr8.4:24470293-24470312 | None:intergenic | 35.0% | |
| GTCTCTGCTATTAAGATGTT+AGG | - | chr8.4:24470020-24470039 | MS.gene46340:intron | 35.0% | |
| TAAACGTGTTTGTGTCGTAT+TGG | - | chr8.4:24469511-24469530 | MS.gene46340:intron | 35.0% | |
| TAATTCAAACCTCAGGTACA+AGG | + | chr8.4:24469162-24469181 | None:intergenic | 35.0% | |
| TATATAACAGAACCTACCAC+TGG | + | chr8.4:24473304-24473323 | None:intergenic | 35.0% | |
| TCTACTTCAAGATCAGAGTA+TGG | + | chr8.4:24471542-24471561 | None:intergenic | 35.0% | |
| TGCAGTTCGTACATCTAAAT+CGG | - | chr8.4:24472582-24472601 | MS.gene46340:intron | 35.0% | |
| TGCTCTCTAGATATCAGATT+TGG | - | chr8.4:24472540-24472559 | MS.gene46340:intron | 35.0% | |
| TGTTTGTATGCTATTGTGGT+TGG | - | chr8.4:24472168-24472187 | MS.gene46340:intron | 35.0% | |
| TTAGTAAGAGTCAACTTGAG+GGG | - | chr8.4:24473072-24473091 | MS.gene46340:CDS | 35.0% | |
| ! | AGTATGTTGTGTTCAAGTTC+AGG | + | chr8.4:24472780-24472799 | None:intergenic | 35.0% |
| ! | ATTTCCATGCGTTATTTCCT+TGG | - | chr8.4:24469884-24469903 | MS.gene46340:intron | 35.0% |
| ! | CCAACAAATGAACACTTTTC+CGG | + | chr8.4:24473041-24473060 | None:intergenic | 35.0% |
| ! | TAATGTTAGCATGGCATTGA+GGG | - | chr8.4:24472196-24472215 | MS.gene46340:intron | 35.0% |
| ! | TAGAGAGCATAAGCTAAACA+AGG | + | chr8.4:24472529-24472548 | None:intergenic | 35.0% |
| ! | TTATGGCTTATGGGCTAAAT+TGG | - | chr8.4:24470116-24470135 | MS.gene46340:intron | 35.0% |
| ! | TTGCATTGACAAGACTTTGT+TGG | - | chr8.4:24471983-24472002 | MS.gene46340:intron | 35.0% |
| !! | AAAAGGGTGTTCATAGCAAA+TGG | + | chr8.4:24471361-24471380 | None:intergenic | 35.0% |
| !! | ACGGTCTTTAGGATATATAC+TGG | - | chr8.4:24471749-24471768 | MS.gene46340:CDS | 35.0% |
| !! | AGAGTATTGATTGTCACAGT+TGG | + | chr8.4:24472032-24472051 | None:intergenic | 35.0% |
| !! | CAGGTATATTGGCTTCAATT+TGG | - | chr8.4:24473259-24473278 | MS.gene46340:CDS | 35.0% |
| !! | GATGTTAGGGATTAAGTTGA+TGG | - | chr8.4:24470034-24470053 | MS.gene46340:intron | 35.0% |
| !! | TTTGGACGTTATTTTGCAAG+AGG | - | chr8.4:24473277-24473296 | MS.gene46340:CDS | 35.0% |
| !!! | CAGGTGTTTTTTGTGTCTTA+TGG | + | chr8.4:24472761-24472780 | None:intergenic | 35.0% |
| !!! | CTTCATCCATGGTTTGTTTT+AGG | + | chr8.4:24472841-24472860 | None:intergenic | 35.0% |
| !!! | GTTTTAGAAGGAAGAGATTG+CGG | + | chr8.4:24468992-24469011 | None:intergenic | 35.0% |
| AAGACCAAGGAAATAACGCA+TGG | + | chr8.4:24469891-24469910 | None:intergenic | 40.0% | |
| AAGAGCTTAAAGGGGCAATA+TGG | + | chr8.4:24469946-24469965 | None:intergenic | 40.0% | |
| AATCTAGAGGGAAACAGAAG+CGG | + | chr8.4:24470481-24470500 | None:intergenic | 40.0% | |
| ACTACTGGGAATTCGAAGAA+GGG | + | chr8.4:24468936-24468955 | None:intergenic | 40.0% | |
| AGAGCTTAAAGGGGCAATAT+GGG | + | chr8.4:24469945-24469964 | None:intergenic | 40.0% | |
| AGCAACCAAATAAGGAAACC+AGG | + | chr8.4:24470531-24470550 | None:intergenic | 40.0% | |
| ATGTTGGGTAACTTCATCCA+TGG | + | chr8.4:24472852-24472871 | None:intergenic | 40.0% | |
| CACTGATATCCCTTGCAATA+AGG | + | chr8.4:24472898-24472917 | None:intergenic | 40.0% | |
| CCAATATACCTGTGAGTCAA+GGG | + | chr8.4:24473251-24473270 | None:intergenic | 40.0% | |
| GACACTAACTCCTTATTGCA+AGG | - | chr8.4:24472885-24472904 | MS.gene46340:intron | 40.0% | |
| GCATCATTGAAGATGGTTGA+TGG | + | chr8.4:24470772-24470791 | None:intergenic | 40.0% | |
| GCGCTGTTCGTATAAAGAAT+GGG | - | chr8.4:24470588-24470607 | MS.gene46340:intron | 40.0% | |
| GCTTAGTAAGAGTCAACTTG+AGG | - | chr8.4:24473070-24473089 | MS.gene46340:CDS | 40.0% | |
| GTAATGTTAGCATGGCATTG+AGG | - | chr8.4:24472195-24472214 | MS.gene46340:intron | 40.0% | |
| TAACGGAAGCAAACGATTAC+CGG | - | chr8.4:24469065-24469084 | MS.gene46340:CDS | 40.0% | |
| TACCTAACACGATCATGACA+CGG | - | chr8.4:24469437-24469456 | MS.gene46340:intron | 40.0% | |
| TACTACTGGGAATTCGAAGA+AGG | + | chr8.4:24468937-24468956 | None:intergenic | 40.0% | |
| TGAACTGTGACCTTATGAGT+TGG | + | chr8.4:24469109-24469128 | None:intergenic | 40.0% | |
| TGCGCTGTTCGTATAAAGAA+TGG | - | chr8.4:24470587-24470606 | MS.gene46340:intron | 40.0% | |
| TGGGAAAATTAAACAGCCAG+AGG | - | chr8.4:24470607-24470626 | MS.gene46340:intron | 40.0% | |
| TGGTGATTTGATGTTAGCTG+TGG | - | chr8.4:24472310-24472329 | MS.gene46340:intron | 40.0% | |
| TGTGTCTTATGGTACAGAAG+CGG | + | chr8.4:24472750-24472769 | None:intergenic | 40.0% | |
| TTGAGATTCCTTTCGGGAAT+AGG | - | chr8.4:24472814-24472833 | MS.gene46340:intron | 40.0% | |
| TTGGTCTAGACACCAATAGA+TGG | - | chr8.4:24469530-24469549 | MS.gene46340:intron | 40.0% | |
| ! | AATCTAGAGAAGGAGAGTAC+AGG | - | chr8.4:24469833-24469852 | MS.gene46340:intron | 40.0% |
| ! | AATGTTAGCATGGCATTGAG+GGG | - | chr8.4:24472197-24472216 | MS.gene46340:intron | 40.0% |
| ! | ACACCAATAGATGGAAGTGT+CGG | - | chr8.4:24469539-24469558 | MS.gene46340:intron | 40.0% |
| ! | ATTCTCACCGGTGTCAATTT+AGG | - | chr8.4:24469721-24469740 | MS.gene46340:intron | 40.0% |
| ! | GAGTACTGTTTGTGAAATGC+AGG | - | chr8.4:24469257-24469276 | MS.gene46340:intron | 40.0% |
| ! | GGAGAGTTCACTAAAGCATT+AGG | + | chr8.4:24472395-24472414 | None:intergenic | 40.0% |
| !! | AGGTCTTTGAGATTCCTTTC+GGG | - | chr8.4:24472808-24472827 | MS.gene46340:intron | 40.0% |
| !! | CCGGAAAAGTGTTCATTTGT+TGG | - | chr8.4:24473038-24473057 | MS.gene46340:CDS | 40.0% |
| !! | GAGGTCTTTGAGATTCCTTT+CGG | - | chr8.4:24472807-24472826 | MS.gene46340:intron | 40.0% |
| !! | TTATTTTGCAAGAGGACCAG+TGG | - | chr8.4:24473285-24473304 | MS.gene46340:CDS | 40.0% |
| !!! | TTTTAGGACCTATTCCCGAA+AGG | + | chr8.4:24472825-24472844 | None:intergenic | 40.0% |
| AAAGTAAGTACCATGCCTGC+AGG | + | chr8.4:24469334-24469353 | None:intergenic | 45.0% | |
| AACGATTACCGGTATCCTAG+TGG | - | chr8.4:24469076-24469095 | MS.gene46340:CDS | 45.0% | |
| ACAGTTCACGATAGACAACG+AGG | - | chr8.4:24469121-24469140 | MS.gene46340:intron | 45.0% | |
| ACGTACCTGCTCTCTCAATT+CGG | + | chr8.4:24470648-24470667 | None:intergenic | 45.0% | |
| AGATGATTACGCCTTGGAGT+TGG | - | chr8.4:24473409-24473428 | MS.gene46340:CDS | 45.0% | |
| AGTAGCAATGCATGATGCTC+TGG | - | chr8.4:24470719-24470738 | MS.gene46340:intron | 45.0% | |
| ATAATCCAAGTCAAGCCGGA+TGG | - | chr8.4:24471917-24471936 | MS.gene46340:intron | 45.0% | |
| ATGAAGCGTACAACAACAGC+AGG | + | chr8.4:24472076-24472095 | None:intergenic | 45.0% | |
| CACAGCTAATGAACCCACTT+GGG | - | chr8.4:24469637-24469656 | MS.gene46340:intron | 45.0% | |
| CAGGATAATCCAAGTCAAGC+CGG | - | chr8.4:24471913-24471932 | MS.gene46340:intron | 45.0% | |
| CCCTTGACTCACAGGTATAT+TGG | - | chr8.4:24473248-24473267 | MS.gene46340:CDS | 45.0% | |
| CTACTGGGAATTCGAAGAAG+GGG | + | chr8.4:24468935-24468954 | None:intergenic | 45.0% | |
| GATGATGAGAAGATGCTCAG+AGG | + | chr8.4:24472959-24472978 | None:intergenic | 45.0% | |
| GCCAATATACCTGTGAGTCA+AGG | + | chr8.4:24473252-24473271 | None:intergenic | 45.0% | |
| GGAAAGAGATGATTACGCCT+TGG | - | chr8.4:24473403-24473422 | MS.gene46340:CDS | 45.0% | |
| TAAGAGTCAACTTGAGGGGA+TGG | - | chr8.4:24473076-24473095 | MS.gene46340:intron | 45.0% | |
| TAGCCCACCTAAATTGACAC+CGG | + | chr8.4:24469731-24469750 | None:intergenic | 45.0% | |
| TATAAAGGGAGAGGGAACCA+AGG | - | chr8.4:24472711-24472730 | MS.gene46340:intron | 45.0% | |
| TCACAGCTAATGAACCCACT+TGG | - | chr8.4:24469636-24469655 | MS.gene46340:intron | 45.0% | |
| TCACGAATTCCTTGTACCTG+AGG | - | chr8.4:24469150-24469169 | MS.gene46340:intron | 45.0% | |
| TGATTGTCGACGTTCCCAAT+AGG | + | chr8.4:24470407-24470426 | None:intergenic | 45.0% | |
| TTAACATACCCGTAGGAGAG+AGG | - | chr8.4:24470198-24470217 | MS.gene46340:intron | 45.0% | |
| ! | ATGTTAGCATGGCATTGAGG+GGG | - | chr8.4:24472198-24472217 | MS.gene46340:intron | 45.0% |
| ! | ATTTGCTACCCTTGACTCAC+AGG | - | chr8.4:24473240-24473259 | MS.gene46340:CDS | 45.0% |
| ! | GGCTTATGGGCTAAATTGGA+GGG | - | chr8.4:24470120-24470139 | MS.gene46340:intron | 45.0% |
| ! | TCACCGGTGTCAATTTAGGT+GGG | - | chr8.4:24469725-24469744 | MS.gene46340:intron | 45.0% |
| ! | TGATTGTCACAGTTGGTGCA+CGG | + | chr8.4:24472025-24472044 | None:intergenic | 45.0% |
| ! | TGGCTTATGGGCTAAATTGG+AGG | - | chr8.4:24470119-24470138 | MS.gene46340:intron | 45.0% |
| ! | TTTGCTTCCGTTAGTCTCAC+CGG | + | chr8.4:24469058-24469077 | None:intergenic | 45.0% |
| !! | ATTAAACAGCCAGAGGCACT+TGG | - | chr8.4:24470614-24470633 | MS.gene46340:intron | 45.0% |
| !! | TTAAACAGCCAGAGGCACTT+GGG | - | chr8.4:24470615-24470634 | MS.gene46340:intron | 45.0% |
| AAGCGTACAACAACAGCAGG+TGG | + | chr8.4:24472073-24472092 | None:intergenic | 50.0% | |
| AGCAATGCATGATGCTCTGG+AGG | - | chr8.4:24470722-24470741 | MS.gene46340:intron | 50.0% | |
| ATCTGCCGAATTGAGAGAGC+AGG | - | chr8.4:24470640-24470659 | MS.gene46340:intron | 50.0% | |
| GCTAATGAACCCACTTGGGT+TGG | - | chr8.4:24469641-24469660 | MS.gene46340:intron | 50.0% | |
| GTACAACAACAGCAGGTGGA+AGG | + | chr8.4:24472069-24472088 | None:intergenic | 50.0% | |
| GTCCGTGTCATGATCGTGTT+AGG | + | chr8.4:24469442-24469461 | None:intergenic | 50.0% | |
| GTCTCAGGTTCGATTCTCAC+CGG | - | chr8.4:24469709-24469728 | MS.gene46340:intron | 50.0% | |
| TAAAACCCTCCGCAAGTCGA+CGG | - | chr8.4:24469006-24469025 | MS.gene46340:intron | 50.0% | |
| TAGAGTAGAGGAGGACGAAG+TGG | - | chr8.4:24470894-24470913 | MS.gene46340:intron | 50.0% | |
| TCGGCTCATATCCTCGTACT+CGG | - | chr8.4:24472659-24472678 | MS.gene46340:intron | 50.0% | |
| TGGCGATGCTCCAACTCATA+AGG | - | chr8.4:24469096-24469115 | MS.gene46340:intron | 50.0% | |
| TGTCGACGTTCCCAATAGGA+GGG | + | chr8.4:24470403-24470422 | None:intergenic | 50.0% | |
| TTGTCGACGTTCCCAATAGG+AGG | + | chr8.4:24470404-24470423 | None:intergenic | 50.0% | |
| TTTGCAAGAGGACCAGTGGT+AGG | - | chr8.4:24473289-24473308 | MS.gene46340:CDS | 50.0% | |
| ! | CTCACCGGTGTCAATTTAGG+TGG | - | chr8.4:24469724-24469743 | MS.gene46340:intron | 50.0% |
| ! | GCACCGACACTTCCATCTAT+TGG | + | chr8.4:24469545-24469564 | None:intergenic | 50.0% |
| !! | GCGGCTTAGTCTTTTCTCCT+TGG | + | chr8.4:24472731-24472750 | None:intergenic | 50.0% |
| !! | TGGCCTAGTGGTATTGGCTT+GGG | - | chr8.4:24469661-24469680 | MS.gene46340:intron | 50.0% |
| !! | TTGGCCTAGTGGTATTGGCT+TGG | - | chr8.4:24469660-24469679 | MS.gene46340:intron | 50.0% |
| !! | TTGGGTTGGCCTAGTGGTAT+TGG | - | chr8.4:24469655-24469674 | MS.gene46340:intron | 50.0% |
| !!! | GACTTGCGGAGGGTTTTAGA+AGG | + | chr8.4:24469004-24469023 | None:intergenic | 50.0% |
| ACCACTAGGCCAACCCAAGT+GGG | + | chr8.4:24469653-24469672 | None:intergenic | 55.0% | |
| AGGAGAATGAGCCGAGTACG+AGG | + | chr8.4:24472673-24472692 | None:intergenic | 55.0% | |
| AGTAGAGGAGGACGAAGTGG+TGG | - | chr8.4:24470897-24470916 | MS.gene46340:intron | 55.0% | |
| ATGCCTGCAGGCGAATGGAA+GGG | + | chr8.4:24469322-24469341 | None:intergenic | 55.0% | |
| GAATCGAACCTGAGACCTCG+AGG | + | chr8.4:24469705-24469724 | None:intergenic | 55.0% | |
| GCAGATATCCCAAGTGCCTC+TGG | + | chr8.4:24470626-24470645 | None:intergenic | 55.0% | |
| GGACGAAGTGGTGGTTGTAG+TGG | - | chr8.4:24470906-24470925 | MS.gene46340:intron | 55.0% | |
| GGTCCCAAGCCAATACCACT+AGG | + | chr8.4:24469667-24469686 | None:intergenic | 55.0% | |
| TACCACTAGGCCAACCCAAG+TGG | + | chr8.4:24469654-24469673 | None:intergenic | 55.0% | |
| TACGCCTTGGAGTTGGCCAT+GGG | - | chr8.4:24473416-24473435 | MS.gene46340:CDS | 55.0% | |
| TCGAACGCCGGTGAGACTAA+CGG | - | chr8.4:24469048-24469067 | MS.gene46340:intron | 55.0% | |
| TGACACGGACACATAGACGC+AGG | - | chr8.4:24469452-24469471 | MS.gene46340:intron | 55.0% | |
| TTACCCTTCCATTCGCCTGC+AGG | - | chr8.4:24469316-24469335 | MS.gene46340:intron | 55.0% | |
| TTACGCCTTGGAGTTGGCCA+TGG | - | chr8.4:24473415-24473434 | MS.gene46340:CDS | 55.0% | |
| ! | GAGCATCGCCACTAGGATAC+CGG | + | chr8.4:24469087-24469106 | None:intergenic | 55.0% |
| ! | TGTGTCCATCCGGCTTGACT+TGG | + | chr8.4:24471925-24471944 | None:intergenic | 55.0% |
| !! | AGTGGTATTGGCTTGGGACC+TGG | - | chr8.4:24469667-24469686 | MS.gene46340:intron | 55.0% |
| !! | GTGGTATTGGCTTGGGACCT+GGG | - | chr8.4:24469668-24469687 | MS.gene46340:intron | 55.0% |
| !! | TGAGTTGGAGCATCGCCACT+AGG | + | chr8.4:24469094-24469113 | None:intergenic | 55.0% |
| CATGCCTGCAGGCGAATGGA+AGG | + | chr8.4:24469323-24469342 | None:intergenic | 60.0% | |
| CTTCCATTCGCCTGCAGGCA+TGG | - | chr8.4:24469321-24469340 | MS.gene46340:intron | 60.0% | |
| GTACCATGCCTGCAGGCGAA+TGG | + | chr8.4:24469327-24469346 | None:intergenic | 60.0% | |
| GTCACCCATGGCCAACTCCA+AGG | + | chr8.4:24473423-24473442 | None:intergenic | 60.0% | |
| TCGAACCTGAGACCTCGAGG+AGG | + | chr8.4:24469702-24469721 | None:intergenic | 60.0% | |
| !! | ACCCACTTGGGTTGGCCTAG+TGG | - | chr8.4:24469649-24469668 | MS.gene46340:intron | 60.0% |
| AACCCTCCGCAAGTCGACGG+TGG | - | chr8.4:24469009-24469028 | MS.gene46340:intron | 65.0% | |
| AGCGACGGAGCTTCGAACGC+CGG | - | chr8.4:24469036-24469055 | MS.gene46340:intron | 65.0% | |
| GTGCTCCTCCTCGAGGTCTC+AGG | - | chr8.4:24469694-24469713 | MS.gene46340:intron | 65.0% | |
| ! | TCGAGGAGGAGCACACTCCC+AGG | + | chr8.4:24469688-24469707 | None:intergenic | 65.0% |
| ! | TGGGAGTGTGCTCCTCCTCG+AGG | - | chr8.4:24469687-24469706 | MS.gene46340:intron | 65.0% |
| !! | CTGCTGCCACCGTCGACTTG+CGG | + | chr8.4:24469018-24469037 | None:intergenic | 65.0% |
| !! | TGCCACCGTCGACTTGCGGA+GGG | + | chr8.4:24469014-24469033 | None:intergenic | 65.0% |
| GTCGACGGTGGCAGCAGCGA+CGG | - | chr8.4:24469021-24469040 | MS.gene46340:intron | 70.0% | |
| !! | CTGCCACCGTCGACTTGCGG+AGG | + | chr8.4:24469015-24469034 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 24468923 | 24473448 | 24468923 | ID=MS.gene46340 |
| chr8.4 | mRNA | 24468923 | 24473448 | 24468923 | ID=MS.gene46340.t1;Parent=MS.gene46340 |
| chr8.4 | exon | 24473200 | 24473448 | 24473200 | ID=MS.gene46340.t1.exon1;Parent=MS.gene46340.t1 |
| chr8.4 | CDS | 24473200 | 24473448 | 24473200 | ID=cds.MS.gene46340.t1;Parent=MS.gene46340.t1 |
| chr8.4 | exon | 24473029 | 24473092 | 24473029 | ID=MS.gene46340.t1.exon2;Parent=MS.gene46340.t1 |
| chr8.4 | CDS | 24473029 | 24473092 | 24473029 | ID=cds.MS.gene46340.t1;Parent=MS.gene46340.t1 |
| chr8.4 | exon | 24471710 | 24471798 | 24471710 | ID=MS.gene46340.t1.exon3;Parent=MS.gene46340.t1 |
| chr8.4 | CDS | 24471710 | 24471798 | 24471710 | ID=cds.MS.gene46340.t1;Parent=MS.gene46340.t1 |
| chr8.4 | exon | 24470791 | 24470859 | 24470791 | ID=MS.gene46340.t1.exon4;Parent=MS.gene46340.t1 |
| chr8.4 | CDS | 24470791 | 24470859 | 24470791 | ID=cds.MS.gene46340.t1;Parent=MS.gene46340.t1 |
| chr8.4 | exon | 24469065 | 24469109 | 24469065 | ID=MS.gene46340.t1.exon5;Parent=MS.gene46340.t1 |
| chr8.4 | CDS | 24469065 | 24469109 | 24469065 | ID=cds.MS.gene46340.t1;Parent=MS.gene46340.t1 |
| chr8.4 | exon | 24468923 | 24468967 | 24468923 | ID=MS.gene46340.t1.exon6;Parent=MS.gene46340.t1 |
| chr8.4 | CDS | 24468923 | 24468967 | 24468923 | ID=cds.MS.gene46340.t1;Parent=MS.gene46340.t1 |
| Gene Sequence |
| Protein sequence |
