Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55540.t1 | PNX97605.1 | 68.8 | 64 | 18 | 1 | 35 | 96 | 36 | 99 | 5.80E-15 | 90.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55540.t1 | Q5ZCL8 | 81.0 | 42 | 8 | 0 | 35 | 76 | 135 | 176 | 1.2e-13 | 77.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55540.t1 | A0A2K3N3H0 | 68.8 | 64 | 18 | 1 | 35 | 96 | 36 | 99 | 4.2e-15 | 90.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene55540 | 0.820983 | 5.14E-53 | -1.69E-46 |
| MS.gene049254 | MS.gene55540 | 0.813371 | 2.65E-51 | -1.69E-46 |
| MS.gene049272 | MS.gene55540 | 0.803725 | 3.04E-49 | -1.69E-46 |
| MS.gene049404 | MS.gene55540 | 0.805795 | 1.12E-49 | -1.69E-46 |
| MS.gene049669 | MS.gene55540 | 0.811019 | 8.63E-51 | -1.69E-46 |
| MS.gene049825 | MS.gene55540 | 0.81471 | 1.34E-51 | -1.69E-46 |
| MS.gene049873 | MS.gene55540 | 0.831258 | 1.85E-55 | -1.69E-46 |
| MS.gene050156 | MS.gene55540 | 0.813139 | 2.98E-51 | -1.69E-46 |
| MS.gene050228 | MS.gene55540 | 0.800005 | 1.77E-48 | -1.69E-46 |
| MS.gene050303 | MS.gene55540 | 0.850941 | 1.23E-60 | -1.69E-46 |
| MS.gene050355 | MS.gene55540 | 0.847165 | 1.37E-59 | -1.69E-46 |
| MS.gene050442 | MS.gene55540 | 0.817625 | 2.99E-52 | -1.69E-46 |
| MS.gene050605 | MS.gene55540 | 0.806035 | 1.00E-49 | -1.69E-46 |
| MS.gene050719 | MS.gene55540 | 0.823164 | 1.60E-53 | -1.69E-46 |
| MS.gene050721 | MS.gene55540 | 0.823908 | 1.07E-53 | -1.69E-46 |
| MS.gene050724 | MS.gene55540 | 0.806069 | 9.84E-50 | -1.69E-46 |
| MS.gene050780 | MS.gene55540 | 0.815411 | 9.37E-52 | -1.69E-46 |
| MS.gene050799 | MS.gene55540 | 0.810108 | 1.36E-50 | -1.69E-46 |
| MS.gene050844 | MS.gene55540 | 0.843152 | 1.67E-58 | -1.69E-46 |
| MS.gene050953 | MS.gene55540 | 0.805794 | 1.12E-49 | -1.69E-46 |
| MS.gene051181 | MS.gene55540 | 0.802206 | 6.26E-49 | -1.69E-46 |
| MS.gene051247 | MS.gene55540 | 0.813239 | 2.83E-51 | -1.69E-46 |
| MS.gene051265 | MS.gene55540 | 0.803052 | 4.19E-49 | -1.69E-46 |
| MS.gene051744 | MS.gene55540 | 0.805926 | 1.05E-49 | -1.69E-46 |
| MS.gene051935 | MS.gene55540 | 0.812881 | 3.39E-51 | -1.69E-46 |
| MS.gene052012 | MS.gene55540 | 0.818696 | 1.71E-52 | -1.69E-46 |
| MS.gene052108 | MS.gene55540 | 0.811592 | 6.48E-51 | -1.69E-46 |
| MS.gene052190 | MS.gene55540 | 0.814258 | 1.69E-51 | -1.69E-46 |
| MS.gene052208 | MS.gene55540 | 0.819763 | 9.79E-53 | -1.69E-46 |
| MS.gene052333 | MS.gene55540 | 0.809052 | 2.29E-50 | -1.69E-46 |
| MS.gene052358 | MS.gene55540 | -0.820313 | 7.33E-53 | -1.69E-46 |
| MS.gene052376 | MS.gene55540 | 0.810477 | 1.13E-50 | -1.69E-46 |
| MS.gene052384 | MS.gene55540 | 0.805485 | 1.30E-49 | -1.69E-46 |
| MS.gene052519 | MS.gene55540 | 0.87289 | 2.25E-67 | -1.69E-46 |
| MS.gene052584 | MS.gene55540 | 0.81224 | 4.68E-51 | -1.69E-46 |
| MS.gene052586 | MS.gene55540 | 0.802973 | 4.35E-49 | -1.69E-46 |
| MS.gene052685 | MS.gene55540 | 0.803278 | 3.76E-49 | -1.69E-46 |
| MS.gene052773 | MS.gene55540 | 0.824997 | 5.96E-54 | -1.69E-46 |
| MS.gene052863 | MS.gene55540 | 0.826971 | 2.02E-54 | -1.69E-46 |
| MS.gene052896 | MS.gene55540 | 0.802816 | 4.69E-49 | -1.69E-46 |
| MS.gene052926 | MS.gene55540 | 0.807791 | 4.25E-50 | -1.69E-46 |
| MS.gene053006 | MS.gene55540 | 0.826778 | 2.25E-54 | -1.69E-46 |
| MS.gene053008 | MS.gene55540 | 0.818095 | 2.34E-52 | -1.69E-46 |
| MS.gene053145 | MS.gene55540 | 0.811713 | 6.10E-51 | -1.69E-46 |
| MS.gene053166 | MS.gene55540 | 0.803925 | 2.76E-49 | -1.69E-46 |
| MS.gene053226 | MS.gene55540 | 0.820281 | 7.45E-53 | -1.69E-46 |
| MS.gene053294 | MS.gene55540 | 0.806748 | 7.07E-50 | -1.69E-46 |
| MS.gene053953 | MS.gene55540 | 0.833594 | 4.88E-56 | -1.69E-46 |
| MS.gene05415 | MS.gene55540 | 0.809334 | 1.99E-50 | -1.69E-46 |
| MS.gene054236 | MS.gene55540 | 0.813205 | 2.88E-51 | -1.69E-46 |
| MS.gene054472 | MS.gene55540 | 0.814063 | 1.86E-51 | -1.69E-46 |
| MS.gene054651 | MS.gene55540 | 0.827684 | 1.37E-54 | -1.69E-46 |
| MS.gene054657 | MS.gene55540 | 0.805695 | 1.18E-49 | -1.69E-46 |
| MS.gene054775 | MS.gene55540 | 0.821391 | 4.14E-53 | -1.69E-46 |
| MS.gene05517 | MS.gene55540 | 0.803375 | 3.59E-49 | -1.69E-46 |
| MS.gene055222 | MS.gene55540 | 0.801386 | 9.23E-49 | -1.69E-46 |
| MS.gene055586 | MS.gene55540 | 0.802655 | 5.06E-49 | -1.69E-46 |
| MS.gene055623 | MS.gene55540 | 0.80619 | 9.28E-50 | -1.69E-46 |
| MS.gene055701 | MS.gene55540 | 0.803019 | 4.26E-49 | -1.69E-46 |
| MS.gene055778 | MS.gene55540 | 0.816695 | 4.84E-52 | -1.69E-46 |
| MS.gene055808 | MS.gene55540 | 0.800287 | 1.55E-48 | -1.69E-46 |
| MS.gene055818 | MS.gene55540 | 0.84877 | 4.96E-60 | -1.69E-46 |
| MS.gene05604 | MS.gene55540 | 0.800361 | 1.49E-48 | -1.69E-46 |
| MS.gene056366 | MS.gene55540 | 0.807211 | 5.65E-50 | -1.69E-46 |
| MS.gene056373 | MS.gene55540 | 0.800616 | 1.33E-48 | -1.69E-46 |
| MS.gene056506 | MS.gene55540 | 0.837751 | 4.32E-57 | -1.69E-46 |
| MS.gene057026 | MS.gene55540 | 0.834589 | 2.75E-56 | -1.69E-46 |
| MS.gene057060 | MS.gene55540 | 0.843712 | 1.18E-58 | -1.69E-46 |
| MS.gene057208 | MS.gene55540 | 0.823479 | 1.36E-53 | -1.69E-46 |
| MS.gene057693 | MS.gene55540 | 0.829497 | 4.98E-55 | -1.69E-46 |
| MS.gene05795 | MS.gene55540 | 0.800229 | 1.59E-48 | -1.69E-46 |
| MS.gene058037 | MS.gene55540 | 0.858947 | 5.80E-63 | -1.69E-46 |
| MS.gene058548 | MS.gene55540 | 0.819531 | 1.11E-52 | -1.69E-46 |
| MS.gene058549 | MS.gene55540 | 0.817743 | 2.81E-52 | -1.69E-46 |
| MS.gene058625 | MS.gene55540 | 0.82682 | 2.20E-54 | -1.69E-46 |
| MS.gene058829 | MS.gene55540 | 0.809274 | 2.05E-50 | -1.69E-46 |
| MS.gene058979 | MS.gene55540 | 0.812246 | 4.67E-51 | -1.69E-46 |
| MS.gene059249 | MS.gene55540 | 0.847631 | 1.02E-59 | -1.69E-46 |
| MS.gene059317 | MS.gene55540 | 0.804723 | 1.88E-49 | -1.69E-46 |
| MS.gene05954 | MS.gene55540 | 0.843063 | 1.76E-58 | -1.69E-46 |
| MS.gene059789 | MS.gene55540 | 0.828114 | 1.08E-54 | -1.69E-46 |
| MS.gene05979 | MS.gene55540 | 0.829875 | 4.03E-55 | -1.69E-46 |
| MS.gene059830 | MS.gene55540 | 0.809877 | 1.52E-50 | -1.69E-46 |
| MS.gene059842 | MS.gene55540 | 0.807342 | 5.30E-50 | -1.69E-46 |
| MS.gene060322 | MS.gene55540 | 0.838935 | 2.14E-57 | -1.69E-46 |
| MS.gene060429 | MS.gene55540 | 0.816131 | 6.48E-52 | -1.69E-46 |
| MS.gene060521 | MS.gene55540 | 0.828079 | 1.10E-54 | -1.69E-46 |
| MS.gene060572 | MS.gene55540 | 0.860051 | 2.70E-63 | -1.69E-46 |
| MS.gene060586 | MS.gene55540 | 0.821595 | 3.71E-53 | -1.69E-46 |
| MS.gene060781 | MS.gene55540 | 0.826315 | 2.90E-54 | -1.69E-46 |
| MS.gene060803 | MS.gene55540 | 0.817446 | 3.28E-52 | -1.69E-46 |
| MS.gene060907 | MS.gene55540 | 0.816526 | 5.28E-52 | -1.69E-46 |
| MS.gene061040 | MS.gene55540 | -0.845546 | 3.80E-59 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55540.t1 | MTR_7g082240 | 95.238 | 42 | 2 | 0 | 35 | 76 | 127 | 168 | 4.38e-22 | 89.0 |
| MS.gene55540.t1 | MTR_8g095500 | 92.857 | 42 | 3 | 0 | 35 | 76 | 119 | 160 | 4.60e-21 | 86.3 |
| MS.gene55540.t1 | MTR_8g093450 | 74.074 | 54 | 13 | 1 | 107 | 159 | 42 | 95 | 9.70e-20 | 79.0 |
| MS.gene55540.t1 | MTR_4g108770 | 80.488 | 41 | 8 | 0 | 82 | 122 | 24 | 64 | 1.29e-16 | 71.6 |
| MS.gene55540.t1 | MTR_0168s0120 | 85.294 | 34 | 5 | 0 | 2 | 35 | 68 | 101 | 9.14e-14 | 64.3 |
| MS.gene55540.t1 | MTR_6g025320 | 85.294 | 34 | 5 | 0 | 2 | 35 | 68 | 101 | 9.14e-14 | 64.3 |
| MS.gene55540.t1 | MTR_7g099240 | 81.579 | 38 | 7 | 0 | 85 | 122 | 65 | 102 | 9.46e-14 | 67.0 |
| MS.gene55540.t1 | MTR_7g087610 | 85.294 | 34 | 5 | 0 | 2 | 35 | 104 | 137 | 1.48e-13 | 64.3 |
| MS.gene55540.t1 | MTR_6g025320 | 85.294 | 34 | 5 | 0 | 2 | 35 | 104 | 137 | 1.58e-13 | 64.3 |
| MS.gene55540.t1 | MTR_5g088320 | 85.294 | 34 | 5 | 0 | 2 | 35 | 104 | 137 | 1.63e-13 | 64.3 |
| MS.gene55540.t1 | MTR_3g062480 | 71.053 | 38 | 11 | 0 | 76 | 113 | 13 | 50 | 2.61e-13 | 61.2 |
| MS.gene55540.t1 | MTR_1g041285 | 76.471 | 34 | 8 | 0 | 2 | 35 | 104 | 137 | 2.44e-11 | 58.5 |
| MS.gene55540.t1 | MTR_8g103890 | 50.000 | 46 | 23 | 0 | 34 | 79 | 134 | 179 | 6.18e-11 | 58.5 |
| MS.gene55540.t1 | MTR_8g103890 | 50.000 | 46 | 23 | 0 | 34 | 79 | 134 | 179 | 8.78e-11 | 58.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55540.t1 | AT5G16140 | 71.111 | 45 | 13 | 0 | 35 | 79 | 116 | 160 | 3.19e-16 | 73.6 |
| MS.gene55540.t1 | AT5G16140 | 71.111 | 45 | 13 | 0 | 35 | 79 | 116 | 160 | 3.19e-16 | 73.6 |
| MS.gene55540.t1 | AT5G38290 | 63.265 | 49 | 18 | 0 | 34 | 82 | 125 | 173 | 1.17e-15 | 72.0 |
| MS.gene55540.t1 | AT5G38290 | 64.583 | 48 | 17 | 0 | 35 | 82 | 122 | 169 | 1.37e-15 | 72.0 |
| MS.gene55540.t1 | AT3G43810 | 85.294 | 34 | 5 | 0 | 2 | 35 | 68 | 101 | 9.57e-14 | 64.3 |
| MS.gene55540.t1 | AT3G43810 | 85.294 | 34 | 5 | 0 | 2 | 35 | 68 | 101 | 9.57e-14 | 64.3 |
| MS.gene55540.t1 | AT3G43810 | 85.294 | 34 | 5 | 0 | 2 | 35 | 104 | 137 | 1.65e-13 | 64.3 |
| MS.gene55540.t1 | AT3G56800 | 85.294 | 34 | 5 | 0 | 2 | 35 | 104 | 137 | 1.74e-13 | 64.3 |
| MS.gene55540.t1 | AT2G27030 | 85.294 | 34 | 5 | 0 | 2 | 35 | 104 | 137 | 1.74e-13 | 64.3 |
| MS.gene55540.t1 | AT2G41110 | 85.294 | 34 | 5 | 0 | 2 | 35 | 104 | 137 | 1.74e-13 | 64.3 |
| MS.gene55540.t1 | AT2G27030 | 85.294 | 34 | 5 | 0 | 2 | 35 | 104 | 137 | 2.61e-13 | 64.7 |
| MS.gene55540.t1 | AT2G41110 | 85.294 | 34 | 5 | 0 | 2 | 35 | 116 | 149 | 3.47e-13 | 63.9 |
| MS.gene55540.t1 | AT1G66410 | 82.353 | 34 | 6 | 0 | 2 | 35 | 68 | 101 | 4.62e-13 | 62.4 |
| MS.gene55540.t1 | AT1G66410 | 82.353 | 34 | 6 | 0 | 2 | 35 | 68 | 101 | 4.62e-13 | 62.4 |
| MS.gene55540.t1 | AT5G21274 | 82.353 | 34 | 6 | 0 | 2 | 35 | 104 | 137 | 5.49e-13 | 63.2 |
| MS.gene55540.t1 | AT3G43810 | 82.857 | 35 | 6 | 0 | 2 | 36 | 104 | 138 | 6.05e-13 | 64.3 |
| MS.gene55540.t1 | AT5G37780 | 82.353 | 34 | 6 | 0 | 2 | 35 | 91 | 124 | 6.26e-13 | 62.8 |
| MS.gene55540.t1 | AT1G18440 | 32.061 | 131 | 71 | 5 | 35 | 155 | 165 | 287 | 7.24e-13 | 64.7 |
| MS.gene55540.t1 | AT5G37780 | 82.353 | 34 | 6 | 0 | 2 | 35 | 119 | 152 | 8.59e-13 | 62.8 |
| MS.gene55540.t1 | AT5G37780 | 82.353 | 34 | 6 | 0 | 2 | 35 | 104 | 137 | 8.63e-13 | 62.4 |
| MS.gene55540.t1 | AT1G66410 | 82.353 | 34 | 6 | 0 | 2 | 35 | 104 | 137 | 8.63e-13 | 62.4 |
| MS.gene55540.t1 | AT1G66410 | 82.353 | 34 | 6 | 0 | 2 | 35 | 114 | 147 | 8.68e-13 | 62.8 |
| MS.gene55540.t1 | AT5G37780 | 82.353 | 34 | 6 | 0 | 2 | 35 | 130 | 163 | 1.21e-12 | 62.8 |
| MS.gene55540.t1 | AT5G19830 | 63.636 | 44 | 16 | 0 | 36 | 79 | 90 | 133 | 2.98e-12 | 62.4 |
| MS.gene55540.t1 | AT3G22930 | 76.471 | 34 | 8 | 0 | 2 | 35 | 127 | 160 | 3.65e-11 | 58.5 |
Find 43 sgRNAs with CRISPR-Local
Find 268 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAGAATGATAGCTTGAAAT+TGG | 0.282055 | 6.2:+17558167 | None:intergenic |
| ATCCCTCCTCTTTGTTAAAC+TGG | 0.287597 | 6.2:+17557212 | None:intergenic |
| TGGAAACGGATCCAGGAATT+AGG | 0.306654 | 6.2:-17558193 | MS.gene55540:CDS |
| TGATGCCCATGTCCACCTTT+AGG | 0.328247 | 6.2:+17558905 | None:intergenic |
| GAAATTGGAGGCCTAATTCC+TGG | 0.362834 | 6.2:+17558182 | None:intergenic |
| AAATACTTACCACTAGAATA+TGG | 0.382387 | 6.2:+17559056 | None:intergenic |
| AGTTGTTGATTATGAATTGT+TGG | 0.390538 | 6.2:-17558213 | MS.gene55540:CDS |
| AAGAAAAGATGAAAAGTGTA+TGG | 0.395163 | 6.2:-17557177 | MS.gene55540:CDS |
| AACAACTTTAATACCCTCAT+TGG | 0.402430 | 6.2:+17558229 | None:intergenic |
| TGAAGCTTTAAATCACCATT+TGG | 0.405000 | 6.2:+17558929 | None:intergenic |
| GTGAAAGATAAGAAAGATCT+TGG | 0.408538 | 6.2:-17557262 | MS.gene55540:CDS |
| AATACCCTCATTGGTCAAGT+TGG | 0.414500 | 6.2:+17558238 | None:intergenic |
| ATACCCTCATTGGTCAAGTT+GGG | 0.440473 | 6.2:+17558239 | None:intergenic |
| AAGCTTTACGCACCTCATCT+TGG | 0.450470 | 6.2:+17558141 | None:intergenic |
| ATTCAAGAGGCTAGTGTTGA+TGG | 0.457006 | 6.2:-17561042 | MS.gene55540:CDS |
| GAATTGTTGGAAACGGATCC+AGG | 0.463618 | 6.2:-17558200 | MS.gene55540:CDS |
| GTTTAACAAAGAGGAGGGAT+TGG | 0.488431 | 6.2:-17557209 | MS.gene55540:CDS |
| CTTCAACCTAAAGGTGGACA+TGG | 0.505877 | 6.2:-17558911 | MS.gene55540:CDS |
| GTGGACATGGGCATCACAAT+GGG | 0.516901 | 6.2:-17558898 | MS.gene55540:intron |
| GATTTAAAGCTTCAACCTAA+AGG | 0.529437 | 6.2:-17558920 | MS.gene55540:CDS |
| GAATGATAGCTTGAAATTGG+AGG | 0.530395 | 6.2:+17558170 | None:intergenic |
| GCTCCCAACTTGACCAATGA+GGG | 0.530587 | 6.2:-17558242 | MS.gene55540:CDS |
| TGATTATGAATTGTTGGAAA+CGG | 0.536522 | 6.2:-17558207 | MS.gene55540:CDS |
| AGAAAAGATGAAAAGTGTAT+GGG | 0.540681 | 6.2:-17557176 | MS.gene55540:CDS |
| GCTTTAAATCACCATTTGGA+AGG | 0.557619 | 6.2:+17558933 | None:intergenic |
| GATGAATCTAGCCTTCCAAA+TGG | 0.563781 | 6.2:-17558944 | MS.gene55540:CDS |
| TACCAGTTTAACAAAGAGGA+GGG | 0.568079 | 6.2:-17557214 | MS.gene55540:CDS |
| CGTCATGTGATGACAAACAT+TGG | 0.575460 | 6.2:-17561099 | MS.gene55540:CDS |
| GGTGGACATGGGCATCACAA+TGG | 0.579435 | 6.2:-17558899 | MS.gene55540:CDS |
| TTAAAGCTTCAACCTAAAGG+TGG | 0.585946 | 6.2:-17558917 | MS.gene55540:CDS |
| GTATTACCAGTTTAACAAAG+AGG | 0.598288 | 6.2:-17557218 | MS.gene55540:CDS |
| GCCTTTGCGCCATATTCTAG+TGG | 0.600652 | 6.2:-17559065 | MS.gene55540:intron |
| TGCTCCCAACTTGACCAATG+AGG | 0.604163 | 6.2:-17558243 | MS.gene55540:CDS |
| GACTAGTCAAGCATCGAACA+CGG | 0.605807 | 6.2:-17558270 | MS.gene55540:intron |
| TCTTGGAATCATGAAAGTCA+AGG | 0.609272 | 6.2:-17557245 | MS.gene55540:CDS |
| TTACCAGTTTAACAAAGAGG+AGG | 0.617647 | 6.2:-17557215 | MS.gene55540:CDS |
| GAGGCTAGTGTTGATGGTGA+TGG | 0.620492 | 6.2:-17561036 | MS.gene55540:CDS |
| AGTCGATGAGATGATTCAAG+AGG | 0.628817 | 6.2:-17561055 | MS.gene55540:CDS |
| ACTCGATAATATGCAGCAAG+AGG | 0.632295 | 6.2:+17559088 | None:intergenic |
| TCATTCTGATATCCAAGATG+AGG | 0.632338 | 6.2:-17558153 | MS.gene55540:intron |
| AAGATGAAAAGTGTATGGGA+AGG | 0.640402 | 6.2:-17557172 | MS.gene55540:CDS |
| ACCACTAGAATATGGCGCAA+AGG | 0.645982 | 6.2:+17559064 | None:intergenic |
| TTCAACCTAAAGGTGGACAT+GGG | 0.647848 | 6.2:-17558910 | MS.gene55540:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATTGATAAAAAAAAAAATG+TGG | - | chr6.2:17558228-17558247 | MS.gene55540:CDS | 10.0% |
| !!! | TATTAAGATTTTTTAAGTAT+CGG | - | chr6.2:17559431-17559450 | MS.gene55540:intron | 10.0% |
| !!! | TTTTCCTATATATAAATAAA+TGG | + | chr6.2:17558666-17558685 | None:intergenic | 10.0% |
| !! | AAAAATGAAAAATTACATAC+GGG | + | chr6.2:17560745-17560764 | None:intergenic | 15.0% |
| !! | AAAACAATAAACAACAAAAA+TGG | + | chr6.2:17557646-17557665 | None:intergenic | 15.0% |
| !! | AATTAAGATATGTATAGTAA+GGG | - | chr6.2:17559572-17559591 | MS.gene55540:intron | 15.0% |
| !! | ATATAAATAAATGGAATGTT+AGG | + | chr6.2:17558657-17558676 | None:intergenic | 15.0% |
| !! | ATGATCTAAAAAATATTACT+TGG | + | chr6.2:17557266-17557285 | None:intergenic | 15.0% |
| !! | CAAAAATGAAAAATTACATA+CGG | + | chr6.2:17560746-17560765 | None:intergenic | 15.0% |
| !! | CATTCCATTTATTTATATAT+AGG | - | chr6.2:17558659-17558678 | MS.gene55540:intron | 15.0% |
| !! | TTCAATCATATTACTAAATT+TGG | + | chr6.2:17557600-17557619 | None:intergenic | 15.0% |
| !! | TTTAGTAATATGATTGAAAA+TGG | - | chr6.2:17557602-17557621 | MS.gene55540:intron | 15.0% |
| !! | TTTATATATAGGAAAAAGAT+TGG | - | chr6.2:17558670-17558689 | MS.gene55540:intron | 15.0% |
| !!! | AGGAAAAATATATTCTAAAA+TGG | + | chr6.2:17557808-17557827 | None:intergenic | 15.0% |
| !!! | CTCATTTTTAATATTCTTAA+AGG | - | chr6.2:17559160-17559179 | MS.gene55540:intron | 15.0% |
| !!! | TTCTTAATTTAGGTTTTTTT+TGG | + | chr6.2:17557291-17557310 | None:intergenic | 15.0% |
| !!! | TTTTAATATTCTTAAAGGTA+GGG | - | chr6.2:17559165-17559184 | MS.gene55540:intron | 15.0% |
| !!! | TTTTTAATATTCTTAAAGGT+AGG | - | chr6.2:17559164-17559183 | MS.gene55540:intron | 15.0% |
| !! | AAAAAAATATCACTTTCGTA+TGG | + | chr6.2:17558476-17558495 | None:intergenic | 20.0% |
| !! | AAGAGTTAAAAGAATTTCAA+AGG | + | chr6.2:17559647-17559666 | None:intergenic | 20.0% |
| !! | AATTAAGAAAATGTTGATCA+AGG | - | chr6.2:17557302-17557321 | MS.gene55540:intron | 20.0% |
| !! | AATTACTTAAATATTGCCAT+GGG | - | chr6.2:17559813-17559832 | MS.gene55540:intron | 20.0% |
| !! | ACAAGTTAAAGTAAATGAAA+GGG | + | chr6.2:17558514-17558533 | None:intergenic | 20.0% |
| !! | ATTGAACAATATAAACGATT+GGG | - | chr6.2:17560894-17560913 | MS.gene55540:intron | 20.0% |
| !! | CCAATAAAATCTAAATTATC+TGG | - | chr6.2:17557897-17557916 | MS.gene55540:intron | 20.0% |
| !! | CTTTACATATTAGTAATAAG+TGG | - | chr6.2:17558120-17558139 | MS.gene55540:intron | 20.0% |
| !! | GAATTAAGATATGTATAGTA+AGG | - | chr6.2:17559571-17559590 | MS.gene55540:intron | 20.0% |
| !! | GTAACTCATTTGAAAAATAA+TGG | - | chr6.2:17560361-17560380 | MS.gene55540:intron | 20.0% |
| !! | TAAAATTCAGTTTAAATCGT+TGG | - | chr6.2:17557946-17557965 | MS.gene55540:intron | 20.0% |
| !! | TAAGATTGAGAAAATTGTAT+TGG | - | chr6.2:17558384-17558403 | MS.gene55540:intron | 20.0% |
| !! | TAAGTAAGTCAAGAAAAAAA+AGG | + | chr6.2:17559965-17559984 | None:intergenic | 20.0% |
| !! | TAATTACTTAAATATTGCCA+TGG | - | chr6.2:17559812-17559831 | MS.gene55540:intron | 20.0% |
| !! | TATATTAATGTGATTGTTGT+TGG | - | chr6.2:17560708-17560727 | MS.gene55540:intron | 20.0% |
| !! | TTTATGGATAATACAAAGAT+GGG | - | chr6.2:17559922-17559941 | MS.gene55540:intron | 20.0% |
| !!! | ATTGGTTTAATTTGTATGAT+TGG | - | chr6.2:17560245-17560264 | MS.gene55540:intron | 20.0% |
| !!! | ATTTAGATTTTATTGGACAT+AGG | + | chr6.2:17557893-17557912 | None:intergenic | 20.0% |
| !!! | ATTTTTTAGTTTTCCTAACT+CGG | - | chr6.2:17560398-17560417 | MS.gene55540:intron | 20.0% |
| !!! | CCAGATAATTTAGATTTTAT+TGG | + | chr6.2:17557900-17557919 | None:intergenic | 20.0% |
| !!! | CGTATGTAATTTTTCATTTT+TGG | - | chr6.2:17560744-17560763 | MS.gene55540:intron | 20.0% |
| !!! | GATCAACATTTTCTTAATTT+AGG | + | chr6.2:17557301-17557320 | None:intergenic | 20.0% |
| !!! | TATCTTAGTTTTACAGATTA+TGG | + | chr6.2:17559794-17559813 | None:intergenic | 20.0% |
| !!! | TTAGAAATTTTCTGTTATGA+TGG | + | chr6.2:17558965-17558984 | None:intergenic | 20.0% |
| !!! | TTGTTGTATTTCTAATAACA+TGG | - | chr6.2:17559407-17559426 | MS.gene55540:intron | 20.0% |
| !!! | TTTCTATACATTTTAGTGAT+GGG | - | chr6.2:17559866-17559885 | MS.gene55540:intron | 20.0% |
| !!! | TTTTCTATACATTTTAGTGA+TGG | - | chr6.2:17559865-17559884 | MS.gene55540:intron | 20.0% |
| !!! | TTTTTTTTCTTGACTTACTT+AGG | - | chr6.2:17559964-17559983 | MS.gene55540:intron | 20.0% |
| ! | AAATACTTACCACTAGAATA+TGG | + | chr6.2:17559223-17559242 | None:intergenic | 25.0% |
| ! | ACAACAAAAATGGATCAAAT+TGG | + | chr6.2:17557636-17557655 | None:intergenic | 25.0% |
| ! | CACAAGTTAAAGTAAATGAA+AGG | + | chr6.2:17558515-17558534 | None:intergenic | 25.0% |
| ! | CATTGAACAATATAAACGAT+TGG | - | chr6.2:17560893-17560912 | MS.gene55540:intron | 25.0% |
| ! | CCAAATATGATTTCAAGAAT+AGG | - | chr6.2:17559456-17559475 | MS.gene55540:intron | 25.0% |
| ! | CCTATTCTTGAAATCATATT+TGG | + | chr6.2:17559459-17559478 | None:intergenic | 25.0% |
| ! | GAAAATCCAAAATATGATCA+TGG | - | chr6.2:17558411-17558430 | MS.gene55540:intron | 25.0% |
| ! | GTTTATGGATAATACAAAGA+TGG | - | chr6.2:17559921-17559940 | MS.gene55540:intron | 25.0% |
| ! | TAAATATTACAAGTAATGCC+AGG | + | chr6.2:17557446-17557465 | None:intergenic | 25.0% |
| ! | TAATTGAGTTTATGTAGCTT+AGG | - | chr6.2:17557488-17557507 | MS.gene55540:intron | 25.0% |
| ! | TGATTATGAATTGTTGGAAA+CGG | - | chr6.2:17560069-17560088 | MS.gene55540:intron | 25.0% |
| !! | AAGAAAAGATGAAAAGTGTA+TGG | - | chr6.2:17561099-17561118 | MS.gene55540:CDS | 25.0% |
| !! | AGAAAAGATGAAAAGTGTAT+GGG | - | chr6.2:17561100-17561119 | MS.gene55540:CDS | 25.0% |
| !! | AGTTGTTGATTATGAATTGT+TGG | - | chr6.2:17560063-17560082 | MS.gene55540:intron | 25.0% |
| !! | GTTTGTGGAAAATTTTATGT+AGG | - | chr6.2:17559304-17559323 | MS.gene55540:intron | 25.0% |
| !! | TAATTTTCTATATCCGAGTT+AGG | + | chr6.2:17560414-17560433 | None:intergenic | 25.0% |
| !! | TGATTGTTGTTGGTATAAAT+TGG | - | chr6.2:17560718-17560737 | MS.gene55540:intron | 25.0% |
| !!! | GATTTTGTTTAGATACAGTT+TGG | - | chr6.2:17559251-17559270 | MS.gene55540:intron | 25.0% |
| !!! | TAGTAATGTGTTTGTTGTTT+GGG | - | chr6.2:17560808-17560827 | MS.gene55540:intron | 25.0% |
| !!! | TCTTTTAACTCTTAACAATG+AGG | - | chr6.2:17559654-17559673 | MS.gene55540:intron | 25.0% |
| !!! | TTAGTAATGTGTTTGTTGTT+TGG | - | chr6.2:17560807-17560826 | MS.gene55540:intron | 25.0% |
| !!! | TTCTATACATTTTAGTGATG+GGG | - | chr6.2:17559867-17559886 | MS.gene55540:intron | 25.0% |
| AACAACTTTAATACCCTCAT+TGG | + | chr6.2:17560050-17560069 | None:intergenic | 30.0% | |
| AACATAAATTTCTCGTGCAA+CGG | + | chr6.2:17557696-17557715 | None:intergenic | 30.0% | |
| AAGATATGTATAGTAAGGGT+TGG | - | chr6.2:17559576-17559595 | MS.gene55540:intron | 30.0% | |
| AATATTATACAGGTTACCCA+TGG | + | chr6.2:17559832-17559851 | None:intergenic | 30.0% | |
| ACAAACACACATACTGAAAT+TGG | - | chr6.2:17559025-17559044 | MS.gene55540:intron | 30.0% | |
| ACAATATAAACGATTGGGAA+TGG | - | chr6.2:17560899-17560918 | MS.gene55540:intron | 30.0% | |
| AGATATGTATAGTAAGGGTT+GGG | - | chr6.2:17559577-17559596 | MS.gene55540:intron | 30.0% | |
| AGCAGTTTCTATAAGTTTCT+TGG | - | chr6.2:17560674-17560693 | MS.gene55540:intron | 30.0% | |
| ATCTTTCTTATCTTTCACCT+TGG | + | chr6.2:17561012-17561031 | None:intergenic | 30.0% | |
| CAAGGATAAACAAAGTTGTT+AGG | + | chr6.2:17560187-17560206 | None:intergenic | 30.0% | |
| CTGAAAAGAAGCTTCAATTT+AGG | - | chr6.2:17560957-17560976 | MS.gene55540:intron | 30.0% | |
| GAACATAGATCTATGAACAA+TGG | + | chr6.2:17558050-17558069 | None:intergenic | 30.0% | |
| GATCAAGGAAATGACAAAAA+GGG | - | chr6.2:17557317-17557336 | MS.gene55540:intron | 30.0% | |
| GCTACATAAACTCAATTAAG+TGG | + | chr6.2:17557486-17557505 | None:intergenic | 30.0% | |
| GCTTGAATATAGTGAATCTA+AGG | - | chr6.2:17560267-17560286 | MS.gene55540:intron | 30.0% | |
| GTATTACCAGTTTAACAAAG+AGG | - | chr6.2:17561058-17561077 | MS.gene55540:CDS | 30.0% | |
| GTGAAAGATAAGAAAGATCT+TGG | - | chr6.2:17561014-17561033 | MS.gene55540:intron | 30.0% | |
| GTTGAGAGCAAATATTATAC+AGG | + | chr6.2:17559842-17559861 | None:intergenic | 30.0% | |
| TATAATATTACCCCTTGATC+TGG | - | chr6.2:17560925-17560944 | MS.gene55540:intron | 30.0% | |
| TCAAAGCTAAAATAAGAACC+TGG | - | chr6.2:17558264-17558283 | MS.gene55540:CDS | 30.0% | |
| TCAGAATGATAGCTTGAAAT+TGG | + | chr6.2:17560112-17560131 | None:intergenic | 30.0% | |
| TCTATAAGTTTCTTGGAACA+AGG | - | chr6.2:17560681-17560700 | MS.gene55540:intron | 30.0% | |
| TCTTGCAATCAACTAATTTG+CGG | + | chr6.2:17560836-17560855 | None:intergenic | 30.0% | |
| TCTTTCTTATCTTTCACCTT+GGG | + | chr6.2:17561011-17561030 | None:intergenic | 30.0% | |
| TGATCAAGGAAATGACAAAA+AGG | - | chr6.2:17557316-17557335 | MS.gene55540:intron | 30.0% | |
| TGATCATCAATTGCAGAAAT+AGG | + | chr6.2:17560637-17560656 | None:intergenic | 30.0% | |
| TGCTACAAGAAAAAGTTGTT+GGG | + | chr6.2:17558584-17558603 | None:intergenic | 30.0% | |
| TTCATCATCATCATGAACAA+TGG | + | chr6.2:17557385-17557404 | None:intergenic | 30.0% | |
| TTGTGCAAAGTTATCTATAC+TGG | - | chr6.2:17558530-17558549 | MS.gene55540:intron | 30.0% | |
| TTTAACTCTTAACAATGAGG+AGG | - | chr6.2:17559657-17559676 | MS.gene55540:intron | 30.0% | |
| TTTCCACAAACTTAAAGTCA+AGG | + | chr6.2:17559295-17559314 | None:intergenic | 30.0% | |
| ! | ACAAGAACCAGTAAGTTTTT+AGG | - | chr6.2:17557546-17557565 | MS.gene55540:intron | 30.0% |
| ! | CTAACAACTTTGTTTATCCT+TGG | - | chr6.2:17560185-17560204 | MS.gene55540:intron | 30.0% |
| ! | GATTTAAAGCTTCAACCTAA+AGG | - | chr6.2:17559356-17559375 | MS.gene55540:intron | 30.0% |
| ! | TGAAGTCCATGATCATATTT+TGG | + | chr6.2:17558420-17558439 | None:intergenic | 30.0% |
| ! | TTTCCTTGACTTTAAGTTTG+TGG | - | chr6.2:17559289-17559308 | MS.gene55540:intron | 30.0% |
| ! | TTTCTGCAATTGATGATCAT+TGG | - | chr6.2:17560638-17560657 | MS.gene55540:intron | 30.0% |
| !! | ATGCTTTTGGTTACTGAAAA+AGG | + | chr6.2:17557828-17557847 | None:intergenic | 30.0% |
| !! | GTACTACATGTATGTTTTAG+AGG | - | chr6.2:17560600-17560619 | MS.gene55540:intron | 30.0% |
| !! | TGAAGCTTTAAATCACCATT+TGG | + | chr6.2:17559350-17559369 | None:intergenic | 30.0% |
| !!! | TCATTTTTGGAGTTGTTTTG+TGG | - | chr6.2:17560757-17560776 | MS.gene55540:intron | 30.0% |
| !!! | TTTTAGTTTTCCCTCTCAAA+TGG | + | chr6.2:17558622-17558641 | None:intergenic | 30.0% |
| AAAAATACCCATGCCACATA+AGG | + | chr6.2:17558731-17558750 | None:intergenic | 35.0% | |
| AAAATACCCATGCCACATAA+GGG | + | chr6.2:17558730-17558749 | None:intergenic | 35.0% | |
| AAGGAAATGACAAAAAGGGA+TGG | - | chr6.2:17557321-17557340 | MS.gene55540:intron | 35.0% | |
| ACACATACTGAAATTGGTCA+TGG | - | chr6.2:17559031-17559050 | MS.gene55540:intron | 35.0% | |
| AGGAAATGACAAAAAGGGAT+GGG | - | chr6.2:17557322-17557341 | MS.gene55540:intron | 35.0% | |
| AGTAATTCACATCTCACACA+GGG | - | chr6.2:17560339-17560358 | MS.gene55540:intron | 35.0% | |
| AGTCATGCTAGAACATAACA+AGG | + | chr6.2:17559771-17559790 | None:intergenic | 35.0% | |
| AGTTTGTACTTCCAGATCAA+GGG | + | chr6.2:17560939-17560958 | None:intergenic | 35.0% | |
| ATAGTGAGAAGGAGACTAAT+TGG | - | chr6.2:17560523-17560542 | MS.gene55540:intron | 35.0% | |
| ATCATATAAGGCGGATACAA+AGG | - | chr6.2:17559621-17559640 | MS.gene55540:intron | 35.0% | |
| CAGACAAGAGAATTCTACTT+TGG | + | chr6.2:17559731-17559750 | None:intergenic | 35.0% | |
| CTACAAGAAAAAGTTGTTGG+GGG | + | chr6.2:17558582-17558601 | None:intergenic | 35.0% | |
| CTGCTACAAGAAAAAGTTGT+TGG | + | chr6.2:17558585-17558604 | None:intergenic | 35.0% | |
| CTTGTTTGTGGAACTAAGTA+AGG | - | chr6.2:17557512-17557531 | MS.gene55540:intron | 35.0% | |
| GAACAAGCAAATTAAGCATG+TGG | - | chr6.2:17557733-17557752 | MS.gene55540:intron | 35.0% | |
| GAATGATAGCTTGAAATTGG+AGG | + | chr6.2:17560109-17560128 | None:intergenic | 35.0% | |
| GACTCAATAACTAACACTTC+AGG | - | chr6.2:17560857-17560876 | MS.gene55540:intron | 35.0% | |
| GCTACAAGAAAAAGTTGTTG+GGG | + | chr6.2:17558583-17558602 | None:intergenic | 35.0% | |
| GGAACTAAGTAAGGTAACAA+AGG | - | chr6.2:17557521-17557540 | MS.gene55540:intron | 35.0% | |
| GGATAAACAAAGTTGTTAGG+AGG | + | chr6.2:17560184-17560203 | None:intergenic | 35.0% | |
| GTCATGCTAGAACATAACAA+GGG | + | chr6.2:17559770-17559789 | None:intergenic | 35.0% | |
| GTTCTTGCCTAAAAACTTAC+TGG | + | chr6.2:17557556-17557575 | None:intergenic | 35.0% | |
| GTTGTAAAACAGTGCTTTGT+AGG | - | chr6.2:17557357-17557376 | MS.gene55540:intron | 35.0% | |
| TACCAGTTTAACAAAGAGGA+GGG | - | chr6.2:17561062-17561081 | MS.gene55540:CDS | 35.0% | |
| TAGTAATTCACATCTCACAC+AGG | - | chr6.2:17560338-17560357 | MS.gene55540:intron | 35.0% | |
| TCACTTTCGTATGGTACTAT+TGG | + | chr6.2:17558467-17558486 | None:intergenic | 35.0% | |
| TCATTCTGATATCCAAGATG+AGG | - | chr6.2:17560123-17560142 | MS.gene55540:intron | 35.0% | |
| TCGCAACTTCTATGAGTTTA+TGG | - | chr6.2:17559906-17559925 | MS.gene55540:intron | 35.0% | |
| TCTTGGAATCATGAAAGTCA+AGG | - | chr6.2:17561031-17561050 | MS.gene55540:intron | 35.0% | |
| TTAAAGCTTCAACCTAAAGG+TGG | - | chr6.2:17559359-17559378 | MS.gene55540:intron | 35.0% | |
| TTACCAGTTTAACAAAGAGG+AGG | - | chr6.2:17561061-17561080 | MS.gene55540:CDS | 35.0% | |
| TTCACTTGTCAACTTGAACT+CGG | + | chr6.2:17558291-17558310 | None:intergenic | 35.0% | |
| ! | AAGATGAAAAGTGTATGGGA+AGG | - | chr6.2:17561104-17561123 | MS.gene55540:CDS | 35.0% |
| ! | GCTTTAAATCACCATTTGGA+AGG | + | chr6.2:17559346-17559365 | None:intergenic | 35.0% |
| ! | GTTTATCCTTGGTCTGATTT+TGG | - | chr6.2:17560196-17560215 | MS.gene55540:intron | 35.0% |
| ! | TTAAACTCTCCAGATGCTTT+TGG | + | chr6.2:17557841-17557860 | None:intergenic | 35.0% |
| !! | ACTTTTTCTTGTAGCAGTTG+TGG | - | chr6.2:17558588-17558607 | MS.gene55540:intron | 35.0% |
| !! | CATGCTTAATTTGCTTGTTC+AGG | + | chr6.2:17557733-17557752 | None:intergenic | 35.0% |
| !! | GACGTCGATTTAACAAGAAT+TGG | - | chr6.2:17560227-17560246 | MS.gene55540:intron | 35.0% |
| !! | TGTGTTGGTGGTATCATATA+AGG | - | chr6.2:17559609-17559628 | MS.gene55540:intron | 35.0% |
| !! | TTTCAGTAACCAAAAGCATC+TGG | - | chr6.2:17557829-17557848 | MS.gene55540:intron | 35.0% |
| AAATACCCATGCCACATAAG+GGG | + | chr6.2:17558729-17558748 | None:intergenic | 40.0% | |
| AAATTTCTCGTGCAACGGAA+GGG | + | chr6.2:17557691-17557710 | None:intergenic | 40.0% | |
| AACTCTTAACAATGAGGAGG+TGG | - | chr6.2:17559660-17559679 | MS.gene55540:intron | 40.0% | |
| AAGCATGAAACAACAACGAG+TGG | + | chr6.2:17559002-17559021 | None:intergenic | 40.0% | |
| AATACCCTCATTGGTCAAGT+TGG | + | chr6.2:17560041-17560060 | None:intergenic | 40.0% | |
| AATGAGGAGGTGGTATTATG+TGG | - | chr6.2:17559670-17559689 | MS.gene55540:intron | 40.0% | |
| ACCATGGCAAACAAAATGCT+AGG | + | chr6.2:17560294-17560313 | None:intergenic | 40.0% | |
| ACTCGATAATATGCAGCAAG+AGG | + | chr6.2:17559191-17559210 | None:intergenic | 40.0% | |
| AGCATGAAACAACAACGAGT+GGG | + | chr6.2:17559001-17559020 | None:intergenic | 40.0% | |
| AGTCGATGAGATGATTCAAG+AGG | - | chr6.2:17557221-17557240 | MS.gene55540:CDS | 40.0% | |
| ATACCCTCATTGGTCAAGTT+GGG | + | chr6.2:17560040-17560059 | None:intergenic | 40.0% | |
| ATAGTAAGGGTTGGGTTTCT+AGG | - | chr6.2:17559585-17559604 | MS.gene55540:intron | 40.0% | |
| ATCCCTCCTCTTTGTTAAAC+TGG | + | chr6.2:17561067-17561086 | None:intergenic | 40.0% | |
| ATGAGGAGGTGGTATTATGT+GGG | - | chr6.2:17559671-17559690 | MS.gene55540:intron | 40.0% | |
| ATGGAAGAGTGGTATGAAGA+AGG | + | chr6.2:17558703-17558722 | None:intergenic | 40.0% | |
| CAGTTTGTACTTCCAGATCA+AGG | + | chr6.2:17560940-17560959 | None:intergenic | 40.0% | |
| CGTCATGTGATGACAAACAT+TGG | - | chr6.2:17557177-17557196 | MS.gene55540:CDS | 40.0% | |
| GAAATGACAAAAAGGGATGG+GGG | - | chr6.2:17557324-17557343 | MS.gene55540:intron | 40.0% | |
| GAGATCTAAGAGAGAGAAGA+GGG | + | chr6.2:17558781-17558800 | None:intergenic | 40.0% | |
| GATTGAGAATGACTGAACCA+TGG | + | chr6.2:17560310-17560329 | None:intergenic | 40.0% | |
| GGAAATGACAAAAAGGGATG+GGG | - | chr6.2:17557323-17557342 | MS.gene55540:intron | 40.0% | |
| GGGATCTTAACTGATATGCA+GGG | + | chr6.2:17560457-17560476 | None:intergenic | 40.0% | |
| GTCATGACTTGATATACCCA+AGG | - | chr6.2:17560992-17561011 | MS.gene55540:intron | 40.0% | |
| GTTGTAGCAACTACTACTAG+AGG | + | chr6.2:17559707-17559726 | None:intergenic | 40.0% | |
| GTTTAACAAAGAGGAGGGAT+TGG | - | chr6.2:17561067-17561086 | MS.gene55540:CDS | 40.0% | |
| GTTTGTACTTCCAGATCAAG+GGG | + | chr6.2:17560938-17560957 | None:intergenic | 40.0% | |
| TAAATTTCTCGTGCAACGGA+AGG | + | chr6.2:17557692-17557711 | None:intergenic | 40.0% | |
| TACGCGTAGAAATAGTGAGA+AGG | - | chr6.2:17560512-17560531 | MS.gene55540:intron | 40.0% | |
| TGGAAGAGTGGTATGAAGAA+GGG | + | chr6.2:17558702-17558721 | None:intergenic | 40.0% | |
| TTCAACCTAAAGGTGGACAT+GGG | - | chr6.2:17559366-17559385 | MS.gene55540:intron | 40.0% | |
| ! | ATGATGGTGATCAGTGATGA+AGG | + | chr6.2:17558949-17558968 | None:intergenic | 40.0% |
| ! | ATTCAAGAGGCTAGTGTTGA+TGG | - | chr6.2:17557234-17557253 | MS.gene55540:CDS | 40.0% |
| ! | GATGAATCTAGCCTTCCAAA+TGG | - | chr6.2:17559332-17559351 | MS.gene55540:intron | 40.0% |
| ! | TATCCTTGGTCTGATTTTGG+TGG | - | chr6.2:17560199-17560218 | MS.gene55540:intron | 40.0% |
| ! | TGTAGCTTAGGACTTGTTTG+TGG | - | chr6.2:17557500-17557519 | MS.gene55540:intron | 40.0% |
| ! | TTGCTTGTTCAGGTTAGACT+TGG | + | chr6.2:17557723-17557742 | None:intergenic | 40.0% |
| !! | ACCTAGCATTTTGTTTGCCA+TGG | - | chr6.2:17560290-17560309 | MS.gene55540:intron | 40.0% |
| !! | GTTGGTGGTATCATATAAGG+CGG | - | chr6.2:17559612-17559631 | MS.gene55540:intron | 40.0% |
| AAGCTTTACGCACCTCATCT+TGG | + | chr6.2:17560138-17560157 | None:intergenic | 45.0% | |
| ACCACTAGAATATGGCGCAA+AGG | + | chr6.2:17559215-17559234 | None:intergenic | 45.0% | |
| AGAGTGAGAGGGAGAAGAAA+GGG | + | chr6.2:17558803-17558822 | None:intergenic | 45.0% | |
| AGGACAACATGCGAGCTTAA+GGG | + | chr6.2:17557873-17557892 | None:intergenic | 45.0% | |
| ATACACCCCTTATGTGGCAT+GGG | - | chr6.2:17558721-17558740 | MS.gene55540:intron | 45.0% | |
| ATGAAACAACAACGAGTGGG+AGG | + | chr6.2:17558998-17559017 | None:intergenic | 45.0% | |
| ATGACATTTGACAGTCAGCC+TGG | - | chr6.2:17557425-17557444 | MS.gene55540:intron | 45.0% | |
| ATGGTGATCAGTGATGAAGG+TGG | + | chr6.2:17558946-17558965 | None:intergenic | 45.0% | |
| CGGAAGGGTCAAAGATATTG+TGG | + | chr6.2:17557676-17557695 | None:intergenic | 45.0% | |
| CGGGATCTTAACTGATATGC+AGG | + | chr6.2:17560458-17560477 | None:intergenic | 45.0% | |
| CTTCAACCTAAAGGTGGACA+TGG | - | chr6.2:17559365-17559384 | MS.gene55540:intron | 45.0% | |
| GAAATTGGAGGCCTAATTCC+TGG | + | chr6.2:17560097-17560116 | None:intergenic | 45.0% | |
| GAATTGTTGGAAACGGATCC+AGG | - | chr6.2:17560076-17560095 | MS.gene55540:intron | 45.0% | |
| GGAGATCTAAGAGAGAGAAG+AGG | + | chr6.2:17558782-17558801 | None:intergenic | 45.0% | |
| GTTCCACCAAAATCAGACCA+AGG | + | chr6.2:17560205-17560224 | None:intergenic | 45.0% | |
| TAGGACAACATGCGAGCTTA+AGG | + | chr6.2:17557874-17557893 | None:intergenic | 45.0% | |
| TATCTGATCACCATTGCCCA+GGG | + | chr6.2:17558005-17558024 | None:intergenic | 45.0% | |
| TCTTCCATACACCCCTTATG+TGG | - | chr6.2:17558715-17558734 | MS.gene55540:intron | 45.0% | |
| TGGAAACGGATCCAGGAATT+AGG | - | chr6.2:17560083-17560102 | MS.gene55540:intron | 45.0% | |
| ! | ATAAGGGGTGTATGGAAGAG+TGG | + | chr6.2:17558714-17558733 | None:intergenic | 45.0% |
| ! | CCTACATCTGAGGCAATTTG+CGG | + | chr6.2:17560478-17560497 | None:intergenic | 45.0% |
| ! | CTACATCTGAGGCAATTTGC+GGG | + | chr6.2:17560477-17560496 | None:intergenic | 45.0% |
| !! | GACTAGTCAAGCATCGAACA+CGG | - | chr6.2:17560006-17560025 | MS.gene55540:intron | 45.0% |
| !! | GGATCATGTGCCATTTGAGA+GGG | - | chr6.2:17558609-17558628 | MS.gene55540:intron | 45.0% |
| !! | GTTGGGTTTCTAGGATGTGT+TGG | - | chr6.2:17559594-17559613 | MS.gene55540:intron | 45.0% |
| !! | TGGATCATGTGCCATTTGAG+AGG | - | chr6.2:17558608-17558627 | MS.gene55540:intron | 45.0% |
| ATCTGATCACCATTGCCCAG+GGG | + | chr6.2:17558004-17558023 | None:intergenic | 50.0% | |
| CAGAGTGAGAGGGAGAAGAA+AGG | + | chr6.2:17558804-17558823 | None:intergenic | 50.0% | |
| CATACACCCCTTATGTGGCA+TGG | - | chr6.2:17558720-17558739 | MS.gene55540:intron | 50.0% | |
| CCGCAAATTGCCTCAGATGT+AGG | - | chr6.2:17560475-17560494 | MS.gene55540:intron | 50.0% | |
| CTGTGCAATGCCTACATCTG+AGG | + | chr6.2:17560488-17560507 | None:intergenic | 50.0% | |
| GAAAGAGAGAGGAGGACCAA+CGG | + | chr6.2:17558904-17558923 | None:intergenic | 50.0% | |
| GAGTGATAGGCAGAGTGAGA+GGG | + | chr6.2:17558814-17558833 | None:intergenic | 50.0% | |
| GCCTTTGCGCCATATTCTAG+TGG | - | chr6.2:17559211-17559230 | MS.gene55540:intron | 50.0% | |
| GCTCCCAACTTGACCAATGA+GGG | - | chr6.2:17560034-17560053 | MS.gene55540:intron | 50.0% | |
| GTATCTGATCACCATTGCCC+AGG | + | chr6.2:17558006-17558025 | None:intergenic | 50.0% | |
| GTGATCAGTGATGAAGGTGG+TGG | + | chr6.2:17558943-17558962 | None:intergenic | 50.0% | |
| GTGGACATGGGCATCACAAT+GGG | - | chr6.2:17559378-17559397 | MS.gene55540:intron | 50.0% | |
| TCCTCCTCTCTCTTTCTCGT+CGG | - | chr6.2:17558908-17558927 | MS.gene55540:CDS | 50.0% | |
| TGAGTGATAGGCAGAGTGAG+AGG | + | chr6.2:17558815-17558834 | None:intergenic | 50.0% | |
| TGATGCCCATGTCCACCTTT+AGG | + | chr6.2:17559374-17559393 | None:intergenic | 50.0% | |
| TGCTCCCAACTTGACCAATG+AGG | - | chr6.2:17560033-17560052 | MS.gene55540:intron | 50.0% | |
| TGTCAACTTGAACTCGGACC+AGG | + | chr6.2:17558285-17558304 | None:intergenic | 50.0% | |
| ! | ATCAGTGATGAAGGTGGTGG+TGG | + | chr6.2:17558940-17558959 | None:intergenic | 50.0% |
| ! | CATGCCACATAAGGGGTGTA+TGG | + | chr6.2:17558722-17558741 | None:intergenic | 50.0% |
| !! | GAGGCTAGTGTTGATGGTGA+TGG | - | chr6.2:17557240-17557259 | MS.gene55540:CDS | 50.0% |
| !! | GGGTTTCTAGGATGTGTTGG+TGG | - | chr6.2:17559597-17559616 | MS.gene55540:intron | 50.0% |
| GGTGGACATGGGCATCACAA+TGG | - | chr6.2:17559377-17559396 | MS.gene55540:intron | 55.0% | |
| ! | GGTGGTGGTAGGTGAGTGAT+AGG | + | chr6.2:17558827-17558846 | None:intergenic | 55.0% |
| !! | AGTGATGAAGGTGGTGGTGG+TGG | + | chr6.2:17558937-17558956 | None:intergenic | 55.0% |
| AAAGAGAGGGGTGGGGCGAA+GGG | + | chr6.2:17558872-17558891 | None:intergenic | 60.0% | |
| AACGGCCGGCCATCAAAGAG+AGG | + | chr6.2:17558886-17558905 | None:intergenic | 60.0% | |
| ACGGCCGGCCATCAAAGAGA+GGG | + | chr6.2:17558885-17558904 | None:intergenic | 60.0% | |
| CAAGTTCTGCCTCCACCCCT+GGG | - | chr6.2:17557986-17558005 | MS.gene55540:intron | 60.0% | |
| CGGCCATCAAAGAGAGGGGT+GGG | + | chr6.2:17558880-17558899 | None:intergenic | 60.0% | |
| GCCGACGAGAAAGAGAGAGG+AGG | + | chr6.2:17558912-17558931 | None:intergenic | 60.0% | |
| GGCCATCAAAGAGAGGGGTG+GGG | + | chr6.2:17558879-17558898 | None:intergenic | 60.0% | |
| TCAAGTTCTGCCTCCACCCC+TGG | - | chr6.2:17557985-17558004 | MS.gene55540:intron | 60.0% | |
| TGATCACCATTGCCCAGGGG+TGG | + | chr6.2:17558001-17558020 | None:intergenic | 60.0% | |
| ! | CCACCCCTCTCTTTGATGGC+CGG | - | chr6.2:17558878-17558897 | MS.gene55540:intron | 60.0% |
| ! | TCTCTTTGATGGCCGGCCGT+TGG | - | chr6.2:17558885-17558904 | MS.gene55540:intron | 60.0% |
| !! | GATGAAGGTGGTGGTGGTGG+CGG | + | chr6.2:17558934-17558953 | None:intergenic | 60.0% |
| CAAAGAGAGGGGTGGGGCGA+AGG | + | chr6.2:17558873-17558892 | None:intergenic | 65.0% | |
| CCGGCCATCAAAGAGAGGGG+TGG | + | chr6.2:17558881-17558900 | None:intergenic | 65.0% | |
| CGCCCCACCCCTCTCTTTGA+TGG | - | chr6.2:17558874-17558893 | MS.gene55540:intron | 65.0% | |
| CGGCCGGCCATCAAAGAGAG+GGG | + | chr6.2:17558884-17558903 | None:intergenic | 65.0% | |
| GAGAGAGGAGGACCAACGGC+CGG | + | chr6.2:17558900-17558919 | None:intergenic | 65.0% | |
| GCGGCCGACGAGAAAGAGAG+AGG | + | chr6.2:17558915-17558934 | None:intergenic | 65.0% | |
| TCACCATTGCCCAGGGGTGG+AGG | + | chr6.2:17557998-17558017 | None:intergenic | 65.0% | |
| TGGGGCGAAGGGCAAGGATG+CGG | + | chr6.2:17558861-17558880 | None:intergenic | 65.0% | |
| AAGGGCAAGGATGCGGCGGC+GGG | + | chr6.2:17558854-17558873 | None:intergenic | 70.0% | |
| CTGCCTCCACCCCTGGGCAA+TGG | - | chr6.2:17557992-17558011 | MS.gene55540:intron | 70.0% | |
| GAAGGGCAAGGATGCGGCGG+CGG | + | chr6.2:17558855-17558874 | None:intergenic | 70.0% | |
| GGCGAAGGGCAAGGATGCGG+CGG | + | chr6.2:17558858-17558877 | None:intergenic | 70.0% | |
| AAGGATGCGGCGGCGGGCAG+TGG | + | chr6.2:17558848-17558867 | None:intergenic | 75.0% | |
| GAGGGGTGGGGCGAAGGGCA+AGG | + | chr6.2:17558867-17558886 | None:intergenic | 75.0% | |
| !! | CGGCGGGCAGTGGTGGTGGT+AGG | + | chr6.2:17558838-17558857 | None:intergenic | 75.0% |
| ! | GATGCGGCGGCGGGCAGTGG+TGG | + | chr6.2:17558845-17558864 | None:intergenic | 80.0% |
| ! | GCGGCGGCGGGCAGTGGTGG+TGG | + | chr6.2:17558842-17558861 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.2 | gene | 17557165 | 17561133 | 17557165 | ID=MS.gene55540 |
| chr6.2 | mRNA | 17557165 | 17561133 | 17557165 | ID=MS.gene55540.t1;Parent=MS.gene55540 |
| chr6.2 | exon | 17561032 | 17561133 | 17561032 | ID=MS.gene55540.t1.exon1;Parent=MS.gene55540.t1 |
| chr6.2 | CDS | 17561032 | 17561133 | 17561032 | ID=cds.MS.gene55540.t1;Parent=MS.gene55540.t1 |
| chr6.2 | exon | 17559066 | 17559116 | 17559066 | ID=MS.gene55540.t1.exon2;Parent=MS.gene55540.t1 |
| chr6.2 | CDS | 17559066 | 17559116 | 17559066 | ID=cds.MS.gene55540.t1;Parent=MS.gene55540.t1 |
| chr6.2 | exon | 17558899 | 17558972 | 17558899 | ID=MS.gene55540.t1.exon3;Parent=MS.gene55540.t1 |
| chr6.2 | CDS | 17558899 | 17558972 | 17558899 | ID=cds.MS.gene55540.t1;Parent=MS.gene55540.t1 |
| chr6.2 | exon | 17558154 | 17558286 | 17558154 | ID=MS.gene55540.t1.exon4;Parent=MS.gene55540.t1 |
| chr6.2 | CDS | 17558154 | 17558286 | 17558154 | ID=cds.MS.gene55540.t1;Parent=MS.gene55540.t1 |
| chr6.2 | exon | 17557165 | 17557284 | 17557165 | ID=MS.gene55540.t1.exon5;Parent=MS.gene55540.t1 |
| chr6.2 | CDS | 17557165 | 17557284 | 17557165 | ID=cds.MS.gene55540.t1;Parent=MS.gene55540.t1 |
| Gene Sequence |
| Protein sequence |
