Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60737.t1 | XP_013469599.1 | 95.1 | 511 | 24 | 1 | 1 | 510 | 1 | 511 | 3.70E-265 | 923.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60737.t1 | P46228 | 36.7 | 210 | 121 | 5 | 271 | 475 | 94 | 296 | 3.8e-24 | 114.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60737.t1 | A0A072VPA0 | 95.1 | 511 | 24 | 1 | 1 | 510 | 1 | 511 | 2.7e-265 | 923.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene60737 | 0.855928 | 4.54E-62 | -1.69E-46 |
| MS.gene049151 | MS.gene60737 | 0.830568 | 2.73E-55 | -1.69E-46 |
| MS.gene049153 | MS.gene60737 | 0.866712 | 2.33E-65 | -1.69E-46 |
| MS.gene049260 | MS.gene60737 | 0.827214 | 1.77E-54 | -1.69E-46 |
| MS.gene049297 | MS.gene60737 | 0.816746 | 4.72E-52 | -1.69E-46 |
| MS.gene049346 | MS.gene60737 | 0.827495 | 1.52E-54 | -1.69E-46 |
| MS.gene049351 | MS.gene60737 | 0.832625 | 8.49E-56 | -1.69E-46 |
| MS.gene049389 | MS.gene60737 | 0.823758 | 1.17E-53 | -1.69E-46 |
| MS.gene049491 | MS.gene60737 | 0.81897 | 1.48E-52 | -1.69E-46 |
| MS.gene049758 | MS.gene60737 | 0.890395 | 1.02E-73 | -1.69E-46 |
| MS.gene049910 | MS.gene60737 | 0.842733 | 2.16E-58 | -1.69E-46 |
| MS.gene049915 | MS.gene60737 | 0.832586 | 8.69E-56 | -1.69E-46 |
| MS.gene050099 | MS.gene60737 | 0.811242 | 7.72E-51 | -1.69E-46 |
| MS.gene050128 | MS.gene60737 | 0.835362 | 1.75E-56 | -1.69E-46 |
| MS.gene050226 | MS.gene60737 | 0.80538 | 1.37E-49 | -1.69E-46 |
| MS.gene050227 | MS.gene60737 | 0.803206 | 3.89E-49 | -1.69E-46 |
| MS.gene050228 | MS.gene60737 | 0.804004 | 2.66E-49 | -1.69E-46 |
| MS.gene050231 | MS.gene60737 | 0.814567 | 1.44E-51 | -1.69E-46 |
| MS.gene050301 | MS.gene60737 | 0.889069 | 3.37E-73 | -1.69E-46 |
| MS.gene050397 | MS.gene60737 | 0.823316 | 1.48E-53 | -1.69E-46 |
| MS.gene050426 | MS.gene60737 | -0.800957 | 1.13E-48 | -1.69E-46 |
| MS.gene050464 | MS.gene60737 | 0.845985 | 2.89E-59 | -1.69E-46 |
| MS.gene050529 | MS.gene60737 | 0.833461 | 5.26E-56 | -1.69E-46 |
| MS.gene050558 | MS.gene60737 | 0.817929 | 2.56E-52 | -1.69E-46 |
| MS.gene050623 | MS.gene60737 | -0.812193 | 4.80E-51 | -1.69E-46 |
| MS.gene050642 | MS.gene60737 | 0.853215 | 2.77E-61 | -1.69E-46 |
| MS.gene050670 | MS.gene60737 | 0.806998 | 6.26E-50 | -1.69E-46 |
| MS.gene05101 | MS.gene60737 | 0.825053 | 5.78E-54 | -1.69E-46 |
| MS.gene05119 | MS.gene60737 | -0.816644 | 4.97E-52 | -1.69E-46 |
| MS.gene051471 | MS.gene60737 | 0.852384 | 4.78E-61 | -1.69E-46 |
| MS.gene051582 | MS.gene60737 | 0.82946 | 5.09E-55 | -1.69E-46 |
| MS.gene051662 | MS.gene60737 | 0.826761 | 2.27E-54 | -1.69E-46 |
| MS.gene051663 | MS.gene60737 | 0.841139 | 5.69E-58 | -1.69E-46 |
| MS.gene051860 | MS.gene60737 | 0.873768 | 1.14E-67 | -1.69E-46 |
| MS.gene051983 | MS.gene60737 | 0.860999 | 1.40E-63 | -1.69E-46 |
| MS.gene052011 | MS.gene60737 | -0.800781 | 1.23E-48 | -1.69E-46 |
| MS.gene052077 | MS.gene60737 | 0.825916 | 3.61E-54 | -1.69E-46 |
| MS.gene052078 | MS.gene60737 | 0.850329 | 1.82E-60 | -1.69E-46 |
| MS.gene052178 | MS.gene60737 | 0.871958 | 4.59E-67 | -1.69E-46 |
| MS.gene052188 | MS.gene60737 | 0.85475 | 1.00E-61 | -1.69E-46 |
| MS.gene052253 | MS.gene60737 | 0.848938 | 4.45E-60 | -1.69E-46 |
| MS.gene052255 | MS.gene60737 | 0.811052 | 8.49E-51 | -1.69E-46 |
| MS.gene052310 | MS.gene60737 | 0.84126 | 5.29E-58 | -1.69E-46 |
| MS.gene052340 | MS.gene60737 | 0.866197 | 3.40E-65 | -1.69E-46 |
| MS.gene052485 | MS.gene60737 | 0.821717 | 3.48E-53 | -1.69E-46 |
| MS.gene052600 | MS.gene60737 | 0.803351 | 3.63E-49 | -1.69E-46 |
| MS.gene05316 | MS.gene60737 | 0.813641 | 2.31E-51 | -1.69E-46 |
| MS.gene053209 | MS.gene60737 | 0.805186 | 1.51E-49 | -1.69E-46 |
| MS.gene053557 | MS.gene60737 | 0.85926 | 4.68E-63 | -1.69E-46 |
| MS.gene053836 | MS.gene60737 | 0.892913 | 1.02E-74 | -1.69E-46 |
| MS.gene053907 | MS.gene60737 | 0.818201 | 2.22E-52 | -1.69E-46 |
| MS.gene053928 | MS.gene60737 | 0.831591 | 1.53E-55 | -1.69E-46 |
| MS.gene054123 | MS.gene60737 | 0.81742 | 3.33E-52 | -1.69E-46 |
| MS.gene054473 | MS.gene60737 | 0.841065 | 5.96E-58 | -1.69E-46 |
| MS.gene05455 | MS.gene60737 | 0.812979 | 3.23E-51 | -1.69E-46 |
| MS.gene054930 | MS.gene60737 | 0.825362 | 4.89E-54 | -1.69E-46 |
| MS.gene054942 | MS.gene60737 | 0.827308 | 1.68E-54 | -1.69E-46 |
| MS.gene054983 | MS.gene60737 | 0.828968 | 6.69E-55 | -1.69E-46 |
| MS.gene055116 | MS.gene60737 | 0.80577 | 1.14E-49 | -1.69E-46 |
| MS.gene055277 | MS.gene60737 | 0.861037 | 1.36E-63 | -1.69E-46 |
| MS.gene055390 | MS.gene60737 | 0.853668 | 2.05E-61 | -1.69E-46 |
| MS.gene055422 | MS.gene60737 | 0.894152 | 3.23E-75 | -1.69E-46 |
| MS.gene055428 | MS.gene60737 | 0.867511 | 1.30E-65 | -1.69E-46 |
| MS.gene05553 | MS.gene60737 | 0.834051 | 3.75E-56 | -1.69E-46 |
| MS.gene055604 | MS.gene60737 | 0.804953 | 1.69E-49 | -1.69E-46 |
| MS.gene055712 | MS.gene60737 | 0.84168 | 4.10E-58 | -1.69E-46 |
| MS.gene056407 | MS.gene60737 | 0.819295 | 1.25E-52 | -1.69E-46 |
| MS.gene056612 | MS.gene60737 | 0.8394 | 1.62E-57 | -1.69E-46 |
| MS.gene056875 | MS.gene60737 | 0.809466 | 1.87E-50 | -1.69E-46 |
| MS.gene056899 | MS.gene60737 | -0.830554 | 2.75E-55 | -1.69E-46 |
| MS.gene056979 | MS.gene60737 | 0.8666 | 2.53E-65 | -1.69E-46 |
| MS.gene05702 | MS.gene60737 | 0.84614 | 2.62E-59 | -1.69E-46 |
| MS.gene057121 | MS.gene60737 | 0.873616 | 1.28E-67 | -1.69E-46 |
| MS.gene057245 | MS.gene60737 | 0.843921 | 1.04E-58 | -1.69E-46 |
| MS.gene057439 | MS.gene60737 | 0.830297 | 3.18E-55 | -1.69E-46 |
| MS.gene057448 | MS.gene60737 | 0.852137 | 5.62E-61 | -1.69E-46 |
| MS.gene057449 | MS.gene60737 | 0.843175 | 1.65E-58 | -1.69E-46 |
| MS.gene057450 | MS.gene60737 | 0.857077 | 2.09E-62 | -1.69E-46 |
| MS.gene057469 | MS.gene60737 | 0.818013 | 2.45E-52 | -1.69E-46 |
| MS.gene057750 | MS.gene60737 | 0.802441 | 5.60E-49 | -1.69E-46 |
| MS.gene057754 | MS.gene60737 | 0.818539 | 1.86E-52 | -1.69E-46 |
| MS.gene058002 | MS.gene60737 | 0.887838 | 1.00E-72 | -1.69E-46 |
| MS.gene05811 | MS.gene60737 | 0.889019 | 3.52E-73 | -1.69E-46 |
| MS.gene058142 | MS.gene60737 | 0.866271 | 3.22E-65 | -1.69E-46 |
| MS.gene058236 | MS.gene60737 | 0.810809 | 9.58E-51 | -1.69E-46 |
| MS.gene058276 | MS.gene60737 | 0.836528 | 8.87E-57 | -1.69E-46 |
| MS.gene058293 | MS.gene60737 | 0.805228 | 1.48E-49 | -1.69E-46 |
| MS.gene05842 | MS.gene60737 | 0.826891 | 2.11E-54 | -1.69E-46 |
| MS.gene058660 | MS.gene60737 | 0.833563 | 4.96E-56 | -1.69E-46 |
| MS.gene058710 | MS.gene60737 | 0.806903 | 6.56E-50 | -1.69E-46 |
| MS.gene058749 | MS.gene60737 | 0.824309 | 8.66E-54 | -1.69E-46 |
| MS.gene058833 | MS.gene60737 | 0.819303 | 1.25E-52 | -1.69E-46 |
| MS.gene058845 | MS.gene60737 | 0.850416 | 1.72E-60 | -1.69E-46 |
| MS.gene05886 | MS.gene60737 | 0.845499 | 3.91E-59 | -1.69E-46 |
| MS.gene058928 | MS.gene60737 | 0.820273 | 7.48E-53 | -1.69E-46 |
| MS.gene05907 | MS.gene60737 | 0.876601 | 1.23E-68 | -1.69E-46 |
| MS.gene059141 | MS.gene60737 | 0.801729 | 7.85E-49 | -1.69E-46 |
| MS.gene059247 | MS.gene60737 | 0.827154 | 1.83E-54 | -1.69E-46 |
| MS.gene059285 | MS.gene60737 | 0.831241 | 1.87E-55 | -1.69E-46 |
| MS.gene059294 | MS.gene60737 | 0.809484 | 1.85E-50 | -1.69E-46 |
| MS.gene059326 | MS.gene60737 | 0.805237 | 1.47E-49 | -1.69E-46 |
| MS.gene059342 | MS.gene60737 | 0.806922 | 6.50E-50 | -1.69E-46 |
| MS.gene059420 | MS.gene60737 | 0.810498 | 1.12E-50 | -1.69E-46 |
| MS.gene059421 | MS.gene60737 | 0.802683 | 4.99E-49 | -1.69E-46 |
| MS.gene059518 | MS.gene60737 | 0.866713 | 2.33E-65 | -1.69E-46 |
| MS.gene059597 | MS.gene60737 | 0.849476 | 3.15E-60 | -1.69E-46 |
| MS.gene059676 | MS.gene60737 | 0.828909 | 6.92E-55 | -1.69E-46 |
| MS.gene059688 | MS.gene60737 | 0.825291 | 5.08E-54 | -1.69E-46 |
| MS.gene059692 | MS.gene60737 | 0.834931 | 2.25E-56 | -1.69E-46 |
| MS.gene059695 | MS.gene60737 | 0.825354 | 4.91E-54 | -1.69E-46 |
| MS.gene059708 | MS.gene60737 | 0.803232 | 3.84E-49 | -1.69E-46 |
| MS.gene05984 | MS.gene60737 | 0.907401 | 5.28E-81 | -1.69E-46 |
| MS.gene059894 | MS.gene60737 | 0.888382 | 6.20E-73 | -1.69E-46 |
| MS.gene059899 | MS.gene60737 | 0.830371 | 3.05E-55 | -1.69E-46 |
| MS.gene06037 | MS.gene60737 | 0.825763 | 3.93E-54 | -1.69E-46 |
| MS.gene060407 | MS.gene60737 | 0.848824 | 4.79E-60 | -1.69E-46 |
| MS.gene060476 | MS.gene60737 | 0.830583 | 2.71E-55 | -1.69E-46 |
| MS.gene060986 | MS.gene60737 | 0.822044 | 2.92E-53 | -1.69E-46 |
| MS.gene060994 | MS.gene60737 | 0.801334 | 9.46E-49 | -1.69E-46 |
| MS.gene061049 | MS.gene60737 | 0.874877 | 4.79E-68 | -1.69E-46 |
| MS.gene061159 | MS.gene60737 | 0.849766 | 2.62E-60 | -1.69E-46 |
| MS.gene061265 | MS.gene60737 | 0.800513 | 1.39E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60737.t1 | MTR_1g097610 | 96.673 | 511 | 16 | 1 | 1 | 510 | 1 | 511 | 0.0 | 997 |
| MS.gene60737.t1 | MTR_2g033020 | 30.244 | 205 | 135 | 4 | 274 | 475 | 158 | 357 | 1.67e-22 | 100 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60737.t1 | AT1G71720 | 57.490 | 494 | 168 | 9 | 26 | 509 | 37 | 498 | 0.0 | 531 |
| MS.gene60737.t1 | AT1G71720 | 58.156 | 423 | 139 | 6 | 26 | 441 | 37 | 428 | 6.75e-159 | 458 |
| MS.gene60737.t1 | AT5G30510 | 32.195 | 205 | 130 | 4 | 274 | 475 | 165 | 363 | 2.00e-25 | 108 |
Find 91 sgRNAs with CRISPR-Local
Find 280 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATCATACAGAGAGTATTTA+TGG | 0.166666 | 1.2:+71372302 | MS.gene60737:intron |
| GTTGTTGGTGTTGTTGTTTC+AGG | 0.170222 | 1.2:+71368910 | MS.gene60737:CDS |
| CCTATTGTATCTACAAAATT+AGG | 0.248774 | 1.2:+71372369 | MS.gene60737:CDS |
| AGGAGTGGAAAGAACAATAT+TGG | 0.289687 | 1.2:-71368485 | None:intergenic |
| GAACAAGCCGTCACCTGTTT+TGG | 0.299137 | 1.2:+71368648 | MS.gene60737:CDS |
| GGATGAAGTTGAAGAATAAA+TGG | 0.339304 | 1.2:-71368385 | None:intergenic |
| GTTTCTACAACAGGCCTTCC+TGG | 0.339830 | 1.2:-71369126 | None:intergenic |
| GCCTTCTGAAGAGGAAGCTT+TGG | 0.354245 | 1.2:+71368693 | MS.gene60737:CDS |
| GACCGTTGATTTCTACTAGA+AGG | 0.354808 | 1.2:+71369196 | MS.gene60737:CDS |
| TCCTTTGAATGGTAAAGAAA+TGG | 0.358874 | 1.2:+71369002 | MS.gene60737:CDS |
| GGAAGGCCTGTTGTAGAAAC+TGG | 0.360206 | 1.2:+71369129 | MS.gene60737:CDS |
| ATCTTAATTTGTGCTCCATA+TGG | 0.366503 | 1.2:-71370736 | None:intergenic |
| GGCTCTTTCGTCGGATTGCT+TGG | 0.369347 | 1.2:+71369217 | MS.gene60737:CDS |
| ACAACAAAATCACCAGGTTT+TGG | 0.371047 | 1.2:-71368892 | None:intergenic |
| TTCTTTGGTGCTTAGTGAAA+AGG | 0.372446 | 1.2:+71370522 | MS.gene60737:CDS |
| TCTTGTCACAAGCTCAGCTT+TGG | 0.373548 | 1.2:-71370304 | None:intergenic |
| ATGAAGCACTTTATGCAAAC+TGG | 0.377438 | 1.2:+71372424 | MS.gene60737:CDS |
| TAAAACCTCAGCAAACAAAA+TGG | 0.381979 | 1.2:-71369154 | None:intergenic |
| AACTTGAATTTCATCATCAA+TGG | 0.393250 | 1.2:-71368617 | None:intergenic |
| TATGGAGCACAAATTAAGAT+TGG | 0.400360 | 1.2:+71370739 | MS.gene60737:CDS |
| AAAGTCCAGGTTCACTTTCA+AGG | 0.415620 | 1.2:-71372186 | None:intergenic |
| TCCATCTCAACTTCCAAAAC+AGG | 0.419736 | 1.2:-71368661 | None:intergenic |
| CACTTTATGCAAACTGGAAG+TGG | 0.420539 | 1.2:+71372430 | MS.gene60737:CDS |
| AAGGAAGTGCTTCCTTTGAA+TGG | 0.425729 | 1.2:+71368991 | MS.gene60737:CDS |
| CGGCAAAGCACTAGTTGGTA+AGG | 0.432883 | 1.2:-71372394 | None:intergenic |
| ATGGTTCCAGTTTCTACAAC+AGG | 0.436694 | 1.2:-71369135 | None:intergenic |
| GGAGTGGAAAGAACAATATT+GGG | 0.445067 | 1.2:-71368484 | None:intergenic |
| AAAAGAAGGAGAAGATAAGA+AGG | 0.446272 | 1.2:+71368849 | MS.gene60737:CDS |
| AGATAATGAGGTATTAGAAC+TGG | 0.450302 | 1.2:+71368771 | MS.gene60737:CDS |
| TCTTTGGTGCTTAGTGAAAA+GGG | 0.453525 | 1.2:+71370523 | MS.gene60737:CDS |
| TGCTTGGCATCGAGTGAGGC+AGG | 0.461627 | 1.2:+71369233 | MS.gene60737:CDS |
| AGAATTACAGAGTGGAATAC+TGG | 0.466743 | 1.2:+71370158 | MS.gene60737:CDS |
| GCTTAGTGAAAAGGGAGCTT+GGG | 0.468410 | 1.2:+71370531 | MS.gene60737:CDS |
| CTCCGTTGATGAGAAGGTTA+AGG | 0.469591 | 1.2:+71371809 | MS.gene60737:CDS |
| GAGGTTTCAAGTGATTTAGC+TGG | 0.476222 | 1.2:+71368589 | MS.gene60737:CDS |
| TGCTTAGTGAAAAGGGAGCT+TGG | 0.478307 | 1.2:+71370530 | MS.gene60737:CDS |
| ATTGTTCTTTCCACTCCTCA+TGG | 0.483191 | 1.2:+71368490 | MS.gene60737:CDS |
| TTTACGGTTCAAGGGAAGAT+GGG | 0.487575 | 1.2:+71369063 | MS.gene60737:CDS |
| ATGGAGCACAAATTAAGATT+GGG | 0.487763 | 1.2:+71370740 | MS.gene60737:CDS |
| ATTCAAAGGAAGCACTTCCT+TGG | 0.487899 | 1.2:-71368989 | None:intergenic |
| TGATTTCTTGCTGAAAATGA+AGG | 0.488495 | 1.2:-71368440 | None:intergenic |
| GGAGTTGCAGTTGAAGCATA+AGG | 0.494734 | 1.2:-71368419 | None:intergenic |
| TCAAACGGCAAAGCACTAGT+TGG | 0.498148 | 1.2:-71372399 | None:intergenic |
| ATGAGTGGAGCATCAGTGCC+AGG | 0.498555 | 1.2:+71369108 | MS.gene60737:CDS |
| CTTGTCACAAGCTCAGCTTT+GGG | 0.498895 | 1.2:-71370303 | None:intergenic |
| AGGTTTCAAGTGATTTAGCT+GGG | 0.506029 | 1.2:+71368590 | MS.gene60737:CDS |
| GCCGCCCTTGAAAGTGAACC+TGG | 0.508285 | 1.2:+71372181 | MS.gene60737:CDS |
| CTACTAGAAGGCTCTTTCGT+CGG | 0.515227 | 1.2:+71369208 | MS.gene60737:CDS |
| TCCATTTCTTTACCATTCAA+AGG | 0.525558 | 1.2:-71369003 | None:intergenic |
| AAGTCCAGGTTCACTTTCAA+GGG | 0.528592 | 1.2:-71372185 | None:intergenic |
| AGACCTCAATCGTTGTTAGC+AGG | 0.530608 | 1.2:-71370184 | None:intergenic |
| CGTACTCTCCGTTGATGAGA+AGG | 0.532205 | 1.2:+71371803 | MS.gene60737:CDS |
| AACAAGCTTGATGTAAATGT+TGG | 0.533528 | 1.2:+71368940 | MS.gene60737:CDS |
| TTTGTAGATACAATAGGAGG+AGG | 0.534938 | 1.2:-71372363 | None:intergenic |
| ATTTATGGAAGCTGATATGA+TGG | 0.544898 | 1.2:+71372317 | MS.gene60737:CDS |
| GCCAAAGCTTCCTCTTCAGA+AGG | 0.545333 | 1.2:-71368694 | None:intergenic |
| AATGTTGGAGCAGATTTACT+AGG | 0.550877 | 1.2:+71368955 | MS.gene60737:CDS |
| TCTGTAATTCTAACCTCGAT+AGG | 0.555447 | 1.2:-71370146 | None:intergenic |
| TAGTAAAGATTATGTGAAGG+AGG | 0.556511 | 1.2:+71368741 | MS.gene60737:CDS |
| TTTAGAGCAAAACTTGAAGT+GGG | 0.556785 | 1.2:-71368551 | None:intergenic |
| GGAGGTTGATGAAGATAATG+AGG | 0.561465 | 1.2:+71368759 | MS.gene60737:CDS |
| ACAAGAGAAGCCTTCTGAAG+AGG | 0.577741 | 1.2:+71368684 | MS.gene60737:CDS |
| TCACAAGCTCAGCTTTGGGT+AGG | 0.577775 | 1.2:-71370299 | None:intergenic |
| AACAATTGAACCATGAGGAG+TGG | 0.579544 | 1.2:-71368500 | None:intergenic |
| GAAAAGGCATATCTTCGTGA+AGG | 0.597129 | 1.2:+71370679 | MS.gene60737:CDS |
| CGGCCTGCTAACAACGATTG+AGG | 0.597746 | 1.2:+71370181 | MS.gene60737:CDS |
| TCAACTTCCAAAACAGGTGA+CGG | 0.599928 | 1.2:-71368655 | None:intergenic |
| GAGTACTATGAGCCAAAACC+TGG | 0.601150 | 1.2:+71368880 | MS.gene60737:CDS |
| AGCCTTAACCTTCTCATCAA+CGG | 0.602910 | 1.2:-71371811 | None:intergenic |
| TCCAGGTTCACTTTCAAGGG+CGG | 0.605234 | 1.2:-71372182 | None:intergenic |
| AGGTAGTAAAGATTATGTGA+AGG | 0.610501 | 1.2:+71368738 | MS.gene60737:CDS |
| GTGGAGCATCAGTGCCAGGA+AGG | 0.618214 | 1.2:+71369112 | MS.gene60737:CDS |
| AGGTTAAGGCTCTTGTTGTG+AGG | 0.619077 | 1.2:+71371823 | MS.gene60737:CDS |
| GGATTGCTTGGCATCGAGTG+AGG | 0.619176 | 1.2:+71369229 | MS.gene60737:CDS |
| GGCAAAGCACTAGTTGGTAA+GGG | 0.627922 | 1.2:-71372393 | None:intergenic |
| AAGCATAAGGAAGAATTACA+AGG | 0.632192 | 1.2:-71368406 | None:intergenic |
| AAAAGGCATATCTTCGTGAA+GGG | 0.634782 | 1.2:+71370680 | MS.gene60737:CDS |
| TTTGTTATGTGATGTGAACA+AGG | 0.648082 | 1.2:+71369029 | MS.gene60737:CDS |
| AGCCTTCTAGTAGAAATCAA+CGG | 0.649854 | 1.2:-71369198 | None:intergenic |
| AGATTGGGAAAACTAACAGA+AGG | 0.651020 | 1.2:+71370755 | MS.gene60737:CDS |
| ACTAGGTACAATGTTAACCA+AGG | 0.652350 | 1.2:+71368972 | MS.gene60737:CDS |
| TTAGAAACAATTGAACCATG+AGG | 0.654840 | 1.2:-71368505 | None:intergenic |
| AAGAATGATGAAGTAATGAG+TGG | 0.659184 | 1.2:+71369093 | MS.gene60737:CDS |
| ATGTGATGTGAACAAGGATG+CGG | 0.659417 | 1.2:+71369035 | MS.gene60737:CDS |
| ACACCAACAACAAAATCACC+AGG | 0.669393 | 1.2:-71368898 | None:intergenic |
| ACAGCTCAATGAACCTATCG+AGG | 0.680086 | 1.2:+71370133 | MS.gene60737:CDS |
| AAAAGATGGTGTGAGTGATG+AGG | 0.692251 | 1.2:+71368807 | MS.gene60737:CDS |
| TCCCCGATAAAATCTCTCTG+AGG | 0.706627 | 1.2:+71371853 | MS.gene60737:CDS |
| ATTACAGAGTGGAATACTGG+CGG | 0.713190 | 1.2:+71370161 | MS.gene60737:CDS |
| GGTTTCAAGTGATTTAGCTG+GGG | 0.714323 | 1.2:+71368591 | MS.gene60737:CDS |
| TCGAGGTTAGAATTACAGAG+TGG | 0.742925 | 1.2:+71370150 | MS.gene60737:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTTCAATATTATAAATCA+AGG | + | chr1.2:71369830-71369849 | MS.gene60737:intron | 10.0% |
| !!! | AAATTGAGTTATATTTTCAA+GGG | - | chr1.2:71370810-71370829 | None:intergenic | 15.0% |
| !!! | AAGATTAATGTTTTAAAAAC+CGG | + | chr1.2:71371132-71371151 | MS.gene60737:intron | 15.0% |
| !!! | TAAGTTTTAGTTGTTAATTT+TGG | + | chr1.2:71371664-71371683 | MS.gene60737:intron | 15.0% |
| !! | AATATTATAAATCAAGGACT+TGG | + | chr1.2:71369836-71369855 | MS.gene60737:intron | 20.0% |
| !! | ATACTGAAATTTAGTCAAAA+AGG | + | chr1.2:71369957-71369976 | MS.gene60737:intron | 20.0% |
| !! | ATTAGCAAGAGATTATTATA+AGG | - | chr1.2:71370432-71370451 | None:intergenic | 20.0% |
| !! | TAATAAATGGAGAACAAATA+TGG | - | chr1.2:71369433-71369452 | None:intergenic | 20.0% |
| !! | TCCTATTAAAATTTCTTCTA+TGG | + | chr1.2:71372247-71372266 | MS.gene60737:intron | 20.0% |
| !!! | AATCTGATCTTTTTAATGTT+TGG | + | chr1.2:71370100-71370119 | MS.gene60737:intron | 20.0% |
| !!! | ACCATAGAAGAAATTTTAAT+AGG | - | chr1.2:71372251-71372270 | None:intergenic | 20.0% |
| !!! | ACTTTTTCTTTCAAATAAAG+AGG | + | chr1.2:71372204-71372223 | MS.gene60737:CDS | 20.0% |
| !!! | ATATGGAAAGATCTTTTTTA+CGG | - | chr1.2:71370722-71370741 | None:intergenic | 20.0% |
| !!! | ATCTGATCTTTTTAATGTTT+GGG | + | chr1.2:71370101-71370120 | MS.gene60737:intron | 20.0% |
| !!! | CAAATTGAGTTATATTTTCA+AGG | - | chr1.2:71370811-71370830 | None:intergenic | 20.0% |
| !!! | CCTTTGAAAAACTTAAAAAA+AGG | - | chr1.2:71368721-71368740 | None:intergenic | 20.0% |
| !!! | CCTTTTTTTAAGTTTTTCAA+AGG | + | chr1.2:71368718-71368737 | MS.gene60737:CDS | 20.0% |
| !!! | GAAATTTGGCATAATTTTAT+AGG | + | chr1.2:71371421-71371440 | MS.gene60737:intron | 20.0% |
| !!! | GCATCTAAAACTTTTTTAAT+GGG | + | chr1.2:71371030-71371049 | MS.gene60737:intron | 20.0% |
| !!! | TGCATCTAAAACTTTTTTAA+TGG | + | chr1.2:71371029-71371048 | MS.gene60737:intron | 20.0% |
| !!! | TTTGTCATTTCATATCAAAT+TGG | + | chr1.2:71369907-71369926 | MS.gene60737:intron | 20.0% |
| ! | AAAGAAGATGAAGAAAAAGA+AGG | + | chr1.2:71368835-71368854 | MS.gene60737:CDS | 25.0% |
| ! | AACATAAACTTCAAGTCAAT+GGG | - | chr1.2:71370212-71370231 | None:intergenic | 25.0% |
| ! | AACTTGAATTTCATCATCAA+TGG | - | chr1.2:71368620-71368639 | None:intergenic | 25.0% |
| ! | AAGAAAATTATGCAGAAACA+AGG | - | chr1.2:71371495-71371514 | None:intergenic | 25.0% |
| ! | AATTTGGCATTGCTAATAAA+TGG | - | chr1.2:71369446-71369465 | None:intergenic | 25.0% |
| ! | ACATCTACTAAACTAAACAT+TGG | - | chr1.2:71369293-71369312 | None:intergenic | 25.0% |
| ! | ACTATATAGATAACAATGAC+AGG | - | chr1.2:71370966-71370985 | None:intergenic | 25.0% |
| ! | AGAAAATTATGCAGAAACAA+GGG | - | chr1.2:71371494-71371513 | None:intergenic | 25.0% |
| ! | AGATGAAGCAAAAAATTCTT+TGG | + | chr1.2:71370507-71370526 | MS.gene60737:CDS | 25.0% |
| ! | ATTTACTCAAATAATGACAC+AGG | - | chr1.2:71370235-71370254 | None:intergenic | 25.0% |
| ! | ATTTATTAGCAATGCCAAAT+TGG | + | chr1.2:71369445-71369464 | MS.gene60737:intron | 25.0% |
| ! | CGATTGTTAAACTTTGAATT+TGG | + | chr1.2:71370897-71370916 | MS.gene60737:intron | 25.0% |
| ! | GAAAATATAGATAATGCACT+AGG | + | chr1.2:71370852-71370871 | MS.gene60737:intron | 25.0% |
| ! | GATAAACATTTATCCAAACA+GGG | - | chr1.2:71369504-71369523 | None:intergenic | 25.0% |
| ! | GTAAAAAAGATCTTTCCATA+TGG | + | chr1.2:71370721-71370740 | MS.gene60737:CDS | 25.0% |
| ! | TACTAAACTAAACATTGGAT+AGG | - | chr1.2:71369288-71369307 | None:intergenic | 25.0% |
| ! | TGATAAACATTTATCCAAAC+AGG | - | chr1.2:71369505-71369524 | None:intergenic | 25.0% |
| ! | TGTCATTGTTATCTATATAG+TGG | + | chr1.2:71370965-71370984 | MS.gene60737:intron | 25.0% |
| ! | TTAACATAAACAAATGAGTC+AGG | + | chr1.2:71371954-71371973 | MS.gene60737:intron | 25.0% |
| ! | TTAACTCTATAGAAATGAAC+TGG | + | chr1.2:71370940-71370959 | MS.gene60737:intron | 25.0% |
| ! | TTATTTGAAAGAAAAAGTCC+AGG | - | chr1.2:71372202-71372221 | None:intergenic | 25.0% |
| ! | TTGTATATAAAAAGCAAGCA+GGG | - | chr1.2:71371365-71371384 | None:intergenic | 25.0% |
| ! | TTGTTAAACTTTGAATTTGG+TGG | + | chr1.2:71370900-71370919 | MS.gene60737:intron | 25.0% |
| ! | TTGTTTATGTTAACCAAACA+AGG | - | chr1.2:71371947-71371966 | None:intergenic | 25.0% |
| !! | AACTTCCTTTTGTAATTGTT+GGG | + | chr1.2:71371894-71371913 | MS.gene60737:intron | 25.0% |
| !! | AATCAAATTTTGAATCTTGG+AGG | - | chr1.2:71372029-71372048 | None:intergenic | 25.0% |
| !! | ACGAATCAAATTTTGAATCT+TGG | - | chr1.2:71372032-71372051 | None:intergenic | 25.0% |
| !! | TAACTTCCTTTTGTAATTGT+TGG | + | chr1.2:71371893-71371912 | MS.gene60737:intron | 25.0% |
| !! | TATGCCAAATTTCTCATTTT+GGG | - | chr1.2:71371414-71371433 | None:intergenic | 25.0% |
| !! | TATTTAGCAAACAGTAGTTT+TGG | + | chr1.2:71369387-71369406 | MS.gene60737:intron | 25.0% |
| !! | TCAAAGTTTAACAATCGTTT+TGG | - | chr1.2:71370894-71370913 | None:intergenic | 25.0% |
| !! | TCCATCTTTAATTTATGAGT+CGG | + | chr1.2:71369328-71369347 | MS.gene60737:intron | 25.0% |
| !! | TCTGATCTTTTTAATGTTTG+GGG | + | chr1.2:71370102-71370121 | MS.gene60737:intron | 25.0% |
| !! | TGCTTATTTCTTCATGAATT+CGG | + | chr1.2:71370254-71370273 | MS.gene60737:intron | 25.0% |
| !! | TTATGCCAAATTTCTCATTT+TGG | - | chr1.2:71371415-71371434 | None:intergenic | 25.0% |
| !! | TTGGCATAATTTTATAGGTA+TGG | + | chr1.2:71371426-71371445 | MS.gene60737:intron | 25.0% |
| !!! | TAAAGTGCTTCATTTTCAAA+CGG | - | chr1.2:71372417-71372436 | None:intergenic | 25.0% |
| !!! | TACTATCTTTGTTTCTATCA+TGG | + | chr1.2:71371515-71371534 | MS.gene60737:intron | 25.0% |
| !!! | TTCAAGTTTTGCTCTAAAAA+TGG | + | chr1.2:71368556-71368575 | MS.gene60737:CDS | 25.0% |
| AAAAGAAGGAGAAGATAAGA+AGG | + | chr1.2:71368849-71368868 | MS.gene60737:CDS | 30.0% | |
| AAACCAATTACATATCCCTA+AGG | - | chr1.2:71371086-71371105 | None:intergenic | 30.0% | |
| AAAGATGGAAGATGAAATCT+TGG | - | chr1.2:71369317-71369336 | None:intergenic | 30.0% | |
| AACAAGCTTGATGTAAATGT+TGG | + | chr1.2:71368940-71368959 | MS.gene60737:CDS | 30.0% | |
| AACATTGGATAGGAGTAAAA+AGG | - | chr1.2:71369278-71369297 | None:intergenic | 30.0% | |
| AACCAATTACATATCCCTAA+GGG | - | chr1.2:71371085-71371104 | None:intergenic | 30.0% | |
| AAGAATGATGAAGTAATGAG+TGG | + | chr1.2:71369093-71369112 | MS.gene60737:CDS | 30.0% | |
| AAGCATAAGGAAGAATTACA+AGG | - | chr1.2:71368409-71368428 | None:intergenic | 30.0% | |
| AATGCCAGCTTGATAAAATA+TGG | - | chr1.2:71371701-71371720 | None:intergenic | 30.0% | |
| AGGATTACTAACAGTGATAA+CGG | - | chr1.2:71370034-71370053 | None:intergenic | 30.0% | |
| AGGTAGTAAAGATTATGTGA+AGG | + | chr1.2:71368738-71368757 | MS.gene60737:CDS | 30.0% | |
| ATAACAACGAAAAGGTAGTA+GGG | - | chr1.2:71371567-71371586 | None:intergenic | 30.0% | |
| ATACACCCAACAATTACAAA+AGG | - | chr1.2:71371902-71371921 | None:intergenic | 30.0% | |
| ATCAACAACATGAATGTAGT+TGG | - | chr1.2:71372131-71372150 | None:intergenic | 30.0% | |
| ATGGAGCACAAATTAAGATT+GGG | + | chr1.2:71370740-71370759 | MS.gene60737:CDS | 30.0% | |
| ATGGTCTCATGTGTATATTT+AGG | - | chr1.2:71369414-71369433 | None:intergenic | 30.0% | |
| ATTTATGGAAGCTGATATGA+TGG | + | chr1.2:71372317-71372336 | MS.gene60737:CDS | 30.0% | |
| CAATTACAGCAGCAAATAAA+TGG | - | chr1.2:71371011-71371030 | None:intergenic | 30.0% | |
| GAACATAAACTTCAAGTCAA+TGG | - | chr1.2:71370213-71370232 | None:intergenic | 30.0% | |
| GAAGTTTCTGAACAAAAAGA+TGG | + | chr1.2:71368793-71368812 | MS.gene60737:CDS | 30.0% | |
| GAATGGAAAAAAATTGTCCT+TGG | - | chr1.2:71370390-71370409 | None:intergenic | 30.0% | |
| GCAAGAAAGTAACGAAAAAT+AGG | - | chr1.2:71370582-71370601 | None:intergenic | 30.0% | |
| GGATGAAGTTGAAGAATAAA+TGG | - | chr1.2:71368388-71368407 | None:intergenic | 30.0% | |
| GTTGTATATAAAAAGCAAGC+AGG | - | chr1.2:71371366-71371385 | None:intergenic | 30.0% | |
| TAAAACCTCAGCAAACAAAA+TGG | - | chr1.2:71369157-71369176 | None:intergenic | 30.0% | |
| TAGTAAAGATTATGTGAAGG+AGG | + | chr1.2:71368741-71368760 | MS.gene60737:CDS | 30.0% | |
| TATGGAGCACAAATTAAGAT+TGG | + | chr1.2:71370739-71370758 | MS.gene60737:CDS | 30.0% | |
| TCATTAGACTTTACAGAGAT+AGG | - | chr1.2:71370054-71370073 | None:intergenic | 30.0% | |
| TCCATTTCTTTACCATTCAA+AGG | - | chr1.2:71369006-71369025 | None:intergenic | 30.0% | |
| TCCGACTCATAAATTAAAGA+TGG | - | chr1.2:71369332-71369351 | None:intergenic | 30.0% | |
| TCCTTTGAATGGTAAAGAAA+TGG | + | chr1.2:71369002-71369021 | MS.gene60737:CDS | 30.0% | |
| TCTTCCCAAAATGAGAAATT+TGG | + | chr1.2:71371407-71371426 | MS.gene60737:intron | 30.0% | |
| TGATTTCTTGCTGAAAATGA+AGG | - | chr1.2:71368443-71368462 | None:intergenic | 30.0% | |
| TTAGAAACAATTGAACCATG+AGG | - | chr1.2:71368508-71368527 | None:intergenic | 30.0% | |
| TTAGGGATATGTAATTGGTT+TGG | + | chr1.2:71371085-71371104 | MS.gene60737:intron | 30.0% | |
| ! | AGATAATGAGGTATTAGAAC+TGG | + | chr1.2:71368771-71368790 | MS.gene60737:CDS | 30.0% |
| ! | ATACTTGATCATGATGATGT+AGG | + | chr1.2:71370450-71370469 | MS.gene60737:intron | 30.0% |
| ! | ATAGATTTCAATAGCCCTTT+TGG | + | chr1.2:71371200-71371219 | MS.gene60737:intron | 30.0% |
| ! | GAAAATGTAAGTTGCAGTTT+TGG | + | chr1.2:71370351-71370370 | MS.gene60737:intron | 30.0% |
| ! | TTACCTCAGAGAGATTTTAT+CGG | - | chr1.2:71371859-71371878 | None:intergenic | 30.0% |
| ! | TTTAGAGCAAAACTTGAAGT+GGG | - | chr1.2:71368554-71368573 | None:intergenic | 30.0% |
| ! | TTTGTTATGTGATGTGAACA+AGG | + | chr1.2:71369029-71369048 | MS.gene60737:CDS | 30.0% |
| !! | ACGGAGTATTGATAAGATAA+TGG | - | chr1.2:71370015-71370034 | None:intergenic | 30.0% |
| !! | ATCTTAATTTGTGCTCCATA+TGG | - | chr1.2:71370739-71370758 | None:intergenic | 30.0% |
| !! | ATTTTGTTTGCTGAGGTTTT+AGG | + | chr1.2:71369156-71369175 | MS.gene60737:CDS | 30.0% |
| !! | GATCATACAGAGAGTATTTA+TGG | + | chr1.2:71372302-71372321 | MS.gene60737:intron | 30.0% |
| !! | TATGTAATTGGTTTGGTATC+AGG | + | chr1.2:71371092-71371111 | MS.gene60737:intron | 30.0% |
| !! | TCAATTTGAGTTCTTTTCGA+TGG | + | chr1.2:71370823-71370842 | MS.gene60737:intron | 30.0% |
| !!! | AAGTTTTGCTCTAAAAATGG+TGG | + | chr1.2:71368559-71368578 | MS.gene60737:CDS | 30.0% |
| !!! | AGTTTTGCTCTAAAAATGGT+GGG | + | chr1.2:71368560-71368579 | MS.gene60737:CDS | 30.0% |
| !!! | TTTTAGAGCAAAACTTGAAG+TGG | - | chr1.2:71368555-71368574 | None:intergenic | 30.0% |
| AAGGGCTATTGAAATCTATC+AGG | - | chr1.2:71371199-71371218 | None:intergenic | 35.0% | |
| AATGTTGGAGCAGATTTACT+AGG | + | chr1.2:71368955-71368974 | MS.gene60737:CDS | 35.0% | |
| ACAAACCAAACCGTACTATT+CGG | - | chr1.2:71371315-71371334 | None:intergenic | 35.0% | |
| ACAGCAGCAAATAAATGGAA+AGG | - | chr1.2:71371006-71371025 | None:intergenic | 35.0% | |
| ACTAGGTACAATGTTAACCA+AGG | + | chr1.2:71368972-71368991 | MS.gene60737:CDS | 35.0% | |
| AGAATTACAGAGTGGAATAC+TGG | + | chr1.2:71370158-71370177 | MS.gene60737:CDS | 35.0% | |
| AGATTGGGAAAACTAACAGA+AGG | + | chr1.2:71370755-71370774 | MS.gene60737:CDS | 35.0% | |
| AGCCTTCTAGTAGAAATCAA+CGG | - | chr1.2:71369201-71369220 | None:intergenic | 35.0% | |
| AGGAATCCAACATGTTCATT+TGG | - | chr1.2:71371724-71371743 | None:intergenic | 35.0% | |
| AGGAGTGGAAAGAACAATAT+TGG | - | chr1.2:71368488-71368507 | None:intergenic | 35.0% | |
| AGTAACTACACTGTTCAGAA+TGG | - | chr1.2:71370407-71370426 | None:intergenic | 35.0% | |
| AGTTAATCCAAAGTCCAAAC+AGG | + | chr1.2:71369708-71369727 | MS.gene60737:intron | 35.0% | |
| ATGGCTAAAATGTGACTTGA+AGG | + | chr1.2:71369784-71369803 | MS.gene60737:intron | 35.0% | |
| CAGCTTGATAAAATATGGAC+TGG | - | chr1.2:71371696-71371715 | None:intergenic | 35.0% | |
| CATAACAACGAAAAGGTAGT+AGG | - | chr1.2:71371568-71371587 | None:intergenic | 35.0% | |
| GATAATGCACTAGGTAAATC+AGG | + | chr1.2:71370861-71370880 | MS.gene60737:intron | 35.0% | |
| GATTGCATTGTCTTAGTTTC+TGG | + | chr1.2:71369753-71369772 | MS.gene60737:intron | 35.0% | |
| GGAGTGGAAAGAACAATATT+GGG | - | chr1.2:71368487-71368506 | None:intergenic | 35.0% | |
| TCAAGTCTTTCTGGGTTAAT+TGG | + | chr1.2:71371921-71371940 | MS.gene60737:intron | 35.0% | |
| TCTGTAATTCTAACCTCGAT+AGG | - | chr1.2:71370149-71370168 | None:intergenic | 35.0% | |
| TTCATGAATTCGGATGTGTA+GGG | + | chr1.2:71370264-71370283 | MS.gene60737:intron | 35.0% | |
| ! | AAAAGGCATATCTTCGTGAA+GGG | + | chr1.2:71370680-71370699 | MS.gene60737:CDS | 35.0% |
| ! | AAGTTTTCCTGAAGAGCTTA+TGG | + | chr1.2:71369611-71369630 | MS.gene60737:intron | 35.0% |
| ! | ACAACAAAATCACCAGGTTT+TGG | - | chr1.2:71368895-71368914 | None:intergenic | 35.0% |
| ! | AGGTTTCAAGTGATTTAGCT+GGG | + | chr1.2:71368590-71368609 | MS.gene60737:CDS | 35.0% |
| ! | ATGAAGCACTTTATGCAAAC+TGG | + | chr1.2:71372424-71372443 | MS.gene60737:CDS | 35.0% |
| ! | CAGTCCATATTTTATCAAGC+TGG | + | chr1.2:71371694-71371713 | MS.gene60737:intron | 35.0% |
| ! | CTACTACCTTTTCGTTGTTA+TGG | + | chr1.2:71371566-71371585 | MS.gene60737:intron | 35.0% |
| ! | TAAGCACTTGTTAGACTGTT+TGG | - | chr1.2:71369667-71369686 | None:intergenic | 35.0% |
| ! | TACCTCAGAGAGATTTTATC+GGG | - | chr1.2:71371858-71371877 | None:intergenic | 35.0% |
| ! | TTGATCATGATGATGTAGGT+GGG | + | chr1.2:71370454-71370473 | MS.gene60737:intron | 35.0% |
| !! | AAACCTGGTGATTTTGTTGT+TGG | + | chr1.2:71368895-71368914 | MS.gene60737:CDS | 35.0% |
| !! | GATGACTTGGTGTATATGTA+TGG | + | chr1.2:71369858-71369877 | MS.gene60737:intron | 35.0% |
| !! | GTTTTAGGTAGAACACTTAG+TGG | + | chr1.2:71369171-71369190 | MS.gene60737:CDS | 35.0% |
| !! | TAAAAATGGTGGGTTTGATG+AGG | + | chr1.2:71368570-71368589 | MS.gene60737:CDS | 35.0% |
| !! | TACGGTTTGGTTTGTTCAAT+GGG | + | chr1.2:71371320-71371339 | MS.gene60737:intron | 35.0% |
| !! | TCTTTGGTGCTTAGTGAAAA+GGG | + | chr1.2:71370523-71370542 | MS.gene60737:CDS | 35.0% |
| !! | TTCTTTGGTGCTTAGTGAAA+AGG | + | chr1.2:71370522-71370541 | MS.gene60737:CDS | 35.0% |
| !! | TTTCAATAGCCCTTTTGGTT+TGG | + | chr1.2:71371205-71371224 | MS.gene60737:intron | 35.0% |
| !!! | ACAACAGCAGATGTCATTTT+TGG | - | chr1.2:71369888-71369907 | None:intergenic | 35.0% |
| AAAAGATGGTGTGAGTGATG+AGG | + | chr1.2:71368807-71368826 | MS.gene60737:CDS | 40.0% | |
| AAACCAAACCGTACTATTCG+GGG | - | chr1.2:71371313-71371332 | None:intergenic | 40.0% | |
| AAAGTCCAGGTTCACTTTCA+AGG | - | chr1.2:71372189-71372208 | None:intergenic | 40.0% | |
| AAATCTATCAGGCACCTAAC+TGG | - | chr1.2:71371188-71371207 | None:intergenic | 40.0% | |
| AACAATTGAACCATGAGGAG+TGG | - | chr1.2:71368503-71368522 | None:intergenic | 40.0% | |
| AAGTCCAGGTTCACTTTCAA+GGG | - | chr1.2:71372188-71372207 | None:intergenic | 40.0% | |
| AATCAAGGACTTGGATGACT+TGG | + | chr1.2:71369845-71369864 | MS.gene60737:intron | 40.0% | |
| AATGCACTAGGTAAATCAGG+CGG | + | chr1.2:71370864-71370883 | MS.gene60737:intron | 40.0% | |
| ACACCAACAACAAAATCACC+AGG | - | chr1.2:71368901-71368920 | None:intergenic | 40.0% | |
| ACATGTTGGATTCCTTTCAG+TGG | + | chr1.2:71371729-71371748 | MS.gene60737:intron | 40.0% | |
| AGCCCTTAGGGATATGTAAT+TGG | + | chr1.2:71371080-71371099 | MS.gene60737:intron | 40.0% | |
| AGCCTTAACCTTCTCATCAA+CGG | - | chr1.2:71371814-71371833 | None:intergenic | 40.0% | |
| ATCTGACCCTTGAAAGACAA+AGG | - | chr1.2:71369736-71369755 | None:intergenic | 40.0% | |
| ATGCAGCCATAACAACGAAA+AGG | - | chr1.2:71371575-71371594 | None:intergenic | 40.0% | |
| ATGGCTGCATTGCTGTAAAT+AGG | + | chr1.2:71371585-71371604 | MS.gene60737:intron | 40.0% | |
| ATGGTTCCAGTTTCTACAAC+AGG | - | chr1.2:71369138-71369157 | None:intergenic | 40.0% | |
| ATGTGATGTGAACAAGGATG+CGG | + | chr1.2:71369035-71369054 | MS.gene60737:CDS | 40.0% | |
| ATTACAGAGTGGAATACTGG+CGG | + | chr1.2:71370161-71370180 | MS.gene60737:CDS | 40.0% | |
| ATTGTTCTTTCCACTCCTCA+TGG | + | chr1.2:71368490-71368509 | MS.gene60737:CDS | 40.0% | |
| CAAACCAAACCGTACTATTC+GGG | - | chr1.2:71371314-71371333 | None:intergenic | 40.0% | |
| CACTTTATGCAAACTGGAAG+TGG | + | chr1.2:71372430-71372449 | MS.gene60737:CDS | 40.0% | |
| CATGTTGGATTCCTTTCAGT+GGG | + | chr1.2:71371730-71371749 | MS.gene60737:intron | 40.0% | |
| CTTCATGAATTCGGATGTGT+AGG | + | chr1.2:71370263-71370282 | MS.gene60737:intron | 40.0% | |
| GACATATCCATAAGCTCTTC+AGG | - | chr1.2:71369621-71369640 | None:intergenic | 40.0% | |
| GGCATTCCAAATGAACATGT+TGG | + | chr1.2:71371715-71371734 | MS.gene60737:intron | 40.0% | |
| GTAAAACGACGTACAGGAAA+AGG | + | chr1.2:71370663-71370682 | MS.gene60737:intron | 40.0% | |
| TATCCAAACAGGGCAAAAGT+TGG | - | chr1.2:71369494-71369513 | None:intergenic | 40.0% | |
| TCAACTTCCAAAACAGGTGA+CGG | - | chr1.2:71368658-71368677 | None:intergenic | 40.0% | |
| TCACCATTGAAGAGCCAATT+TGG | - | chr1.2:71369462-71369481 | None:intergenic | 40.0% | |
| TCCATCTCAACTTCCAAAAC+AGG | - | chr1.2:71368664-71368683 | None:intergenic | 40.0% | |
| TCGAGGTTAGAATTACAGAG+TGG | + | chr1.2:71370150-71370169 | MS.gene60737:CDS | 40.0% | |
| TCTAAGAACGGTTCTTCTAC+AGG | + | chr1.2:71372064-71372083 | MS.gene60737:intron | 40.0% | |
| TCTGACCCTTGAAAGACAAA+GGG | - | chr1.2:71369735-71369754 | None:intergenic | 40.0% | |
| TGGGTGTATCAAGTCTTTCT+GGG | + | chr1.2:71371913-71371932 | MS.gene60737:intron | 40.0% | |
| TTGGGTGTATCAAGTCTTTC+TGG | + | chr1.2:71371912-71371931 | MS.gene60737:intron | 40.0% | |
| TTTACGGTTCAAGGGAAGAT+GGG | + | chr1.2:71369063-71369082 | MS.gene60737:CDS | 40.0% | |
| ! | ACCTCAGAGAGATTTTATCG+GGG | - | chr1.2:71371857-71371876 | None:intergenic | 40.0% |
| ! | ATGCCAAATTGGCTCTTCAA+TGG | + | chr1.2:71369456-71369475 | MS.gene60737:intron | 40.0% |
| ! | CAAGGATGCGGAGAATTTTA+CGG | + | chr1.2:71369047-71369066 | MS.gene60737:CDS | 40.0% |
| ! | CATCGATGTTTCGAGTATCT+AGG | + | chr1.2:71370601-71370620 | MS.gene60737:intron | 40.0% |
| ! | CGGAGAATTTTACGGTTCAA+GGG | + | chr1.2:71369055-71369074 | MS.gene60737:CDS | 40.0% |
| ! | CTTGATCATGATGATGTAGG+TGG | + | chr1.2:71370453-71370472 | MS.gene60737:intron | 40.0% |
| ! | GAAAAGGCATATCTTCGTGA+AGG | + | chr1.2:71370679-71370698 | MS.gene60737:CDS | 40.0% |
| ! | GAGGTTTCAAGTGATTTAGC+TGG | + | chr1.2:71368589-71368608 | MS.gene60737:CDS | 40.0% |
| ! | GAGTTCTTTTCGATGGATGA+TGG | + | chr1.2:71370830-71370849 | MS.gene60737:intron | 40.0% |
| ! | GGTTTCAAGTGATTTAGCTG+GGG | + | chr1.2:71368591-71368610 | MS.gene60737:CDS | 40.0% |
| ! | TATCCAACTTTTGCCCTGTT+TGG | + | chr1.2:71369488-71369507 | MS.gene60737:intron | 40.0% |
| ! | TCTTGGAGGATTTTCACGTT+AGG | - | chr1.2:71372015-71372034 | None:intergenic | 40.0% |
| ! | TGATCATGATGATGTAGGTG+GGG | + | chr1.2:71370455-71370474 | MS.gene60737:intron | 40.0% |
| ! | TTTTACGGTTCAAGGGAAGA+TGG | + | chr1.2:71369062-71369081 | MS.gene60737:CDS | 40.0% |
| !! | AAGGAAGTGCTTCCTTTGAA+TGG | + | chr1.2:71368991-71369010 | MS.gene60737:CDS | 40.0% |
| !! | ATTCAAAGGAAGCACTTCCT+TGG | - | chr1.2:71368992-71369011 | None:intergenic | 40.0% |
| !! | GACCGTTGATTTCTACTAGA+AGG | + | chr1.2:71369196-71369215 | MS.gene60737:CDS | 40.0% |
| !! | GACTTGGTGTATATGTATGG+AGG | + | chr1.2:71369861-71369880 | MS.gene60737:intron | 40.0% |
| !! | GGAGGTTGATGAAGATAATG+AGG | + | chr1.2:71368759-71368778 | MS.gene60737:CDS | 40.0% |
| !! | GTACGGTTTGGTTTGTTCAA+TGG | + | chr1.2:71371319-71371338 | MS.gene60737:intron | 40.0% |
| !! | GTTGTTGGTGTTGTTGTTTC+AGG | + | chr1.2:71368910-71368929 | MS.gene60737:CDS | 40.0% |
| !! | GTTTGGTTTGTTCAATGGGA+TGG | + | chr1.2:71371324-71371343 | MS.gene60737:intron | 40.0% |
| !! | TCACATTTTAGCCATCAAGC+TGG | - | chr1.2:71369779-71369798 | None:intergenic | 40.0% |
| !! | TGGAACCATTTTGTTTGCTG+AGG | + | chr1.2:71369149-71369168 | MS.gene60737:CDS | 40.0% |
| !!! | ACCTGTTTTGGAAGTTGAGA+TGG | + | chr1.2:71368660-71368679 | MS.gene60737:CDS | 40.0% |
| AAGCAGGGATTTAGGTCTTG+AGG | - | chr1.2:71371234-71371253 | None:intergenic | 45.0% | |
| ACAGAAGGTGAGTGATTGCT+CGG | + | chr1.2:71370770-71370789 | MS.gene60737:intron | 45.0% | |
| ACAGCTCAATGAACCTATCG+AGG | + | chr1.2:71370133-71370152 | MS.gene60737:CDS | 45.0% | |
| AGACCTCAATCGTTGTTAGC+AGG | - | chr1.2:71370187-71370206 | None:intergenic | 45.0% | |
| CCTACTATCTCCTAGAGACA+GGG | + | chr1.2:71371277-71371296 | MS.gene60737:intron | 45.0% | |
| CTACTAGAAGGCTCTTTCGT+CGG | + | chr1.2:71369208-71369227 | MS.gene60737:CDS | 45.0% | |
| CTGACCCTTGAAAGACAAAG+GGG | - | chr1.2:71369734-71369753 | None:intergenic | 45.0% | |
| CTTGTCACAAGCTCAGCTTT+GGG | - | chr1.2:71370306-71370325 | None:intergenic | 45.0% | |
| GAGTACTATGAGCCAAAACC+TGG | + | chr1.2:71368880-71368899 | MS.gene60737:CDS | 45.0% | |
| GCTTAGTGAAAAGGGAGCTT+GGG | + | chr1.2:71370531-71370550 | MS.gene60737:CDS | 45.0% | |
| GGAGTTGCAGTTGAAGCATA+AGG | - | chr1.2:71368422-71368441 | None:intergenic | 45.0% | |
| TCCCCGATAAAATCTCTCTG+AGG | + | chr1.2:71371853-71371872 | MS.gene60737:CDS | 45.0% | |
| TCCTACTATCTCCTAGAGAC+AGG | + | chr1.2:71371276-71371295 | MS.gene60737:intron | 45.0% | |
| TCTTGTCACAAGCTCAGCTT+TGG | - | chr1.2:71370307-71370326 | None:intergenic | 45.0% | |
| TGCTGTGTAAAACGACGTAC+AGG | + | chr1.2:71370657-71370676 | MS.gene60737:intron | 45.0% | |
| TGCTTAGTGAAAAGGGAGCT+TGG | + | chr1.2:71370530-71370549 | MS.gene60737:CDS | 45.0% | |
| TTGAAGCGAAGCAGGGATTT+AGG | - | chr1.2:71371242-71371261 | None:intergenic | 45.0% | |
| TTGAGGACGCCAAACCAAAA+GGG | - | chr1.2:71371217-71371236 | None:intergenic | 45.0% | |
| TTGGAACGTTCTTCTTGCCA+AGG | + | chr1.2:71370370-71370389 | MS.gene60737:intron | 45.0% | |
| ! | AACTCGTTTGAAGCGAAGCA+GGG | - | chr1.2:71371249-71371268 | None:intergenic | 45.0% |
| ! | ACAAGAGAAGCCTTCTGAAG+AGG | + | chr1.2:71368684-71368703 | MS.gene60737:CDS | 45.0% |
| ! | AGGTTAAGGCTCTTGTTGTG+AGG | + | chr1.2:71371823-71371842 | MS.gene60737:CDS | 45.0% |
| ! | CGTGAAGGGACACTTTTAGA+CGG | + | chr1.2:71370694-71370713 | MS.gene60737:CDS | 45.0% |
| ! | CTCCGTTGATGAGAAGGTTA+AGG | + | chr1.2:71371809-71371828 | MS.gene60737:CDS | 45.0% |
| ! | CTGACAGGTTTGCTCTATTC+CGG | - | chr1.2:71371154-71371173 | None:intergenic | 45.0% |
| ! | GCGGAGAATTTTACGGTTCA+AGG | + | chr1.2:71369054-71369073 | MS.gene60737:CDS | 45.0% |
| ! | TCAAACGGCAAAGCACTAGT+TGG | - | chr1.2:71372402-71372421 | None:intergenic | 45.0% |
| !! | ACGTAGTCGAGCTCTAAGAA+CGG | + | chr1.2:71372052-71372071 | MS.gene60737:intron | 45.0% |
| !! | CTGGGTTAATTGGCCTTGTT+TGG | + | chr1.2:71371931-71371950 | MS.gene60737:intron | 45.0% |
| !! | GGCAAAGCACTAGTTGGTAA+GGG | - | chr1.2:71372396-71372415 | None:intergenic | 45.0% |
| !! | TTAGTTTCTGGCCAGCTTGA+TGG | + | chr1.2:71369765-71369784 | MS.gene60737:intron | 45.0% |
| AAACCGTACTATTCGGGGTC+AGG | - | chr1.2:71371308-71371327 | None:intergenic | 50.0% | |
| AAAGGGGCCTGTTTGGACTT+TGG | - | chr1.2:71369718-71369737 | None:intergenic | 50.0% | |
| AACCCTGACCCCGAATAGTA+CGG | + | chr1.2:71371302-71371321 | MS.gene60737:intron | 50.0% | |
| AACCGTACTATTCGGGGTCA+GGG | - | chr1.2:71371307-71371326 | None:intergenic | 50.0% | |
| ACAGGCCCCTTTGTCTTTCA+AGG | + | chr1.2:71369726-71369745 | MS.gene60737:intron | 50.0% | |
| ACATGCAGCAACCCACTGAA+AGG | - | chr1.2:71371744-71371763 | None:intergenic | 50.0% | |
| AGCAAACCTGTCAGGCATTC+AGG | + | chr1.2:71371160-71371179 | MS.gene60737:intron | 50.0% | |
| CAGGCATTCAGGAACCAGTT+AGG | + | chr1.2:71371171-71371190 | MS.gene60737:intron | 50.0% | |
| CAGGCCCCTTTGTCTTTCAA+GGG | + | chr1.2:71369727-71369746 | MS.gene60737:intron | 50.0% | |
| CGGAATAGAGCAAACCTGTC+AGG | + | chr1.2:71371152-71371171 | MS.gene60737:intron | 50.0% | |
| CTTGAGGACGCCAAACCAAA+AGG | - | chr1.2:71371218-71371237 | None:intergenic | 50.0% | |
| GAAAGACAAAGGGGCCTGTT+TGG | - | chr1.2:71369725-71369744 | None:intergenic | 50.0% | |
| GCCAAAGCTTCCTCTTCAGA+AGG | - | chr1.2:71368697-71368716 | None:intergenic | 50.0% | |
| GCTTTCTGCATGAGCCCTTA+GGG | + | chr1.2:71371068-71371087 | MS.gene60737:intron | 50.0% | |
| GGAAGGCCTGTTGTAGAAAC+TGG | + | chr1.2:71369129-71369148 | MS.gene60737:CDS | 50.0% | |
| GTTTCTACAACAGGCCTTCC+TGG | - | chr1.2:71369129-71369148 | None:intergenic | 50.0% | |
| TCAGGGTTTACCCTGTCTCT+AGG | - | chr1.2:71371290-71371309 | None:intergenic | 50.0% | |
| TCCAGGTTCACTTTCAAGGG+CGG | - | chr1.2:71372185-71372204 | None:intergenic | 50.0% | |
| TGACCCCGAATAGTACGGTT+TGG | + | chr1.2:71371307-71371326 | MS.gene60737:intron | 50.0% | |
| TGCTTTCTGCATGAGCCCTT+AGG | + | chr1.2:71371067-71371086 | MS.gene60737:intron | 50.0% | |
| ! | CAACTCGTTTGAAGCGAAGC+AGG | - | chr1.2:71371250-71371269 | None:intergenic | 50.0% |
| ! | CCCTGTCTCTAGGAGATAGT+AGG | - | chr1.2:71371280-71371299 | None:intergenic | 50.0% |
| ! | CGGCAAAGCACTAGTTGGTA+AGG | - | chr1.2:71372397-71372416 | None:intergenic | 50.0% |
| ! | CGTACTCTCCGTTGATGAGA+AGG | + | chr1.2:71371803-71371822 | MS.gene60737:CDS | 50.0% |
| ! | GAACAAGCCGTCACCTGTTT+TGG | + | chr1.2:71368648-71368667 | MS.gene60737:CDS | 50.0% |
| ! | GCCTTCTGAAGAGGAAGCTT+TGG | + | chr1.2:71368693-71368712 | MS.gene60737:CDS | 50.0% |
| !! | TCACAAGCTCAGCTTTGGGT+AGG | - | chr1.2:71370302-71370321 | None:intergenic | 50.0% |
| CGGCCTGCTAACAACGATTG+AGG | + | chr1.2:71370181-71370200 | MS.gene60737:CDS | 55.0% | |
| CTGGTTCCTGAATGCCTGAC+AGG | - | chr1.2:71371169-71371188 | None:intergenic | 55.0% | |
| GGCTCTTTCGTCGGATTGCT+TGG | + | chr1.2:71369217-71369236 | MS.gene60737:CDS | 55.0% | |
| ! | ATGAGTGGAGCATCAGTGCC+AGG | + | chr1.2:71369108-71369127 | MS.gene60737:CDS | 55.0% |
| ! | GGATTGCTTGGCATCGAGTG+AGG | + | chr1.2:71369229-71369248 | MS.gene60737:CDS | 55.0% |
| GCCGCCCTTGAAAGTGAACC+TGG | + | chr1.2:71372181-71372200 | MS.gene60737:CDS | 60.0% | |
| TCAAGGGCGGCAATGCTGCA+TGG | - | chr1.2:71372172-71372191 | None:intergenic | 60.0% | |
| ! | GCAAGCAGGGCATTCACGTC+TGG | - | chr1.2:71371352-71371371 | None:intergenic | 60.0% |
| ! | GTGGAGCATCAGTGCCAGGA+AGG | + | chr1.2:71369112-71369131 | MS.gene60737:CDS | 60.0% |
| ! | TGCTTGGCATCGAGTGAGGC+AGG | + | chr1.2:71369233-71369252 | MS.gene60737:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 71368382 | 71372470 | 71368382 | ID=MS.gene60737 |
| chr1.2 | mRNA | 71368382 | 71372470 | 71368382 | ID=MS.gene60737.t1;Parent=MS.gene60737 |
| chr1.2 | exon | 71368382 | 71369254 | 71368382 | ID=MS.gene60737.t1.exon1;Parent=MS.gene60737.t1 |
| chr1.2 | CDS | 71368382 | 71369254 | 71368382 | ID=cds.MS.gene60737.t1;Parent=MS.gene60737.t1 |
| chr1.2 | exon | 71370128 | 71370202 | 71370128 | ID=MS.gene60737.t1.exon2;Parent=MS.gene60737.t1 |
| chr1.2 | CDS | 71370128 | 71370202 | 71370128 | ID=cds.MS.gene60737.t1;Parent=MS.gene60737.t1 |
| chr1.2 | exon | 71370285 | 71370356 | 71370285 | ID=MS.gene60737.t1.exon3;Parent=MS.gene60737.t1 |
| chr1.2 | CDS | 71370285 | 71370356 | 71370285 | ID=cds.MS.gene60737.t1;Parent=MS.gene60737.t1 |
| chr1.2 | exon | 71370472 | 71370552 | 71370472 | ID=MS.gene60737.t1.exon4;Parent=MS.gene60737.t1 |
| chr1.2 | CDS | 71370472 | 71370552 | 71370472 | ID=cds.MS.gene60737.t1;Parent=MS.gene60737.t1 |
| chr1.2 | exon | 71370679 | 71370776 | 71370679 | ID=MS.gene60737.t1.exon5;Parent=MS.gene60737.t1 |
| chr1.2 | CDS | 71370679 | 71370776 | 71370679 | ID=cds.MS.gene60737.t1;Parent=MS.gene60737.t1 |
| chr1.2 | exon | 71371749 | 71371874 | 71371749 | ID=MS.gene60737.t1.exon6;Parent=MS.gene60737.t1 |
| chr1.2 | CDS | 71371749 | 71371874 | 71371749 | ID=cds.MS.gene60737.t1;Parent=MS.gene60737.t1 |
| chr1.2 | exon | 71372177 | 71372225 | 71372177 | ID=MS.gene60737.t1.exon7;Parent=MS.gene60737.t1 |
| chr1.2 | CDS | 71372177 | 71372225 | 71372177 | ID=cds.MS.gene60737.t1;Parent=MS.gene60737.t1 |
| chr1.2 | exon | 71372312 | 71372470 | 71372312 | ID=MS.gene60737.t1.exon8;Parent=MS.gene60737.t1 |
| chr1.2 | CDS | 71372312 | 71372470 | 71372312 | ID=cds.MS.gene60737.t1;Parent=MS.gene60737.t1 |
| Gene Sequence |
| Protein sequence |
