Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63749.t1 | XP_024632249.1 | 95.4 | 436 | 20 | 0 | 1 | 436 | 1 | 436 | 3.00E-234 | 820.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63749.t1 | Q9ZVA5 | 49.2 | 429 | 207 | 6 | 15 | 435 | 9 | 434 | 1.5e-101 | 371.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63749.t1 | I3SZ22 | 95.4 | 436 | 20 | 0 | 1 | 436 | 1 | 436 | 2.2e-234 | 820.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049222 | MS.gene63749 | -0.812592 | 3.92E-51 | -1.69E-46 |
| MS.gene049232 | MS.gene63749 | -0.819017 | 1.45E-52 | -1.69E-46 |
| MS.gene049633 | MS.gene63749 | -0.801065 | 1.07E-48 | -1.69E-46 |
| MS.gene049656 | MS.gene63749 | -0.825213 | 5.30E-54 | -1.69E-46 |
| MS.gene049865 | MS.gene63749 | -0.813499 | 2.48E-51 | -1.69E-46 |
| MS.gene050170 | MS.gene63749 | -0.847077 | 1.45E-59 | -1.69E-46 |
| MS.gene050323 | MS.gene63749 | -0.824374 | 8.36E-54 | -1.69E-46 |
| MS.gene050381 | MS.gene63749 | 0.81127 | 7.61E-51 | -1.69E-46 |
| MS.gene050496 | MS.gene63749 | -0.819321 | 1.24E-52 | -1.69E-46 |
| MS.gene050504 | MS.gene63749 | -0.809053 | 2.29E-50 | -1.69E-46 |
| MS.gene050553 | MS.gene63749 | -0.802085 | 6.63E-49 | -1.69E-46 |
| MS.gene050577 | MS.gene63749 | -0.818437 | 1.96E-52 | -1.69E-46 |
| MS.gene050747 | MS.gene63749 | -0.826594 | 2.49E-54 | -1.69E-46 |
| MS.gene05080 | MS.gene63749 | -0.821011 | 5.06E-53 | -1.69E-46 |
| MS.gene050868 | MS.gene63749 | -0.850435 | 1.70E-60 | -1.69E-46 |
| MS.gene050871 | MS.gene63749 | -0.852788 | 3.67E-61 | -1.69E-46 |
| MS.gene050904 | MS.gene63749 | -0.803893 | 2.81E-49 | -1.69E-46 |
| MS.gene050950 | MS.gene63749 | -0.824465 | 7.95E-54 | -1.69E-46 |
| MS.gene051268 | MS.gene63749 | -0.801344 | 9.41E-49 | -1.69E-46 |
| MS.gene051560 | MS.gene63749 | -0.800861 | 1.18E-48 | -1.69E-46 |
| MS.gene051874 | MS.gene63749 | -0.803938 | 2.75E-49 | -1.69E-46 |
| MS.gene051941 | MS.gene63749 | -0.81242 | 4.28E-51 | -1.69E-46 |
| MS.gene051946 | MS.gene63749 | 0.81834 | 2.06E-52 | -1.69E-46 |
| MS.gene052164 | MS.gene63749 | -0.836072 | 1.16E-56 | -1.69E-46 |
| MS.gene052482 | MS.gene63749 | -0.827193 | 1.79E-54 | -1.69E-46 |
| MS.gene052486 | MS.gene63749 | -0.8365 | 9.02E-57 | -1.69E-46 |
| MS.gene052494 | MS.gene63749 | 0.823388 | 1.42E-53 | -1.69E-46 |
| MS.gene052503 | MS.gene63749 | -0.807318 | 5.36E-50 | -1.69E-46 |
| MS.gene052615 | MS.gene63749 | -0.80056 | 1.36E-48 | -1.69E-46 |
| MS.gene052823 | MS.gene63749 | -0.817524 | 3.15E-52 | -1.69E-46 |
| MS.gene052825 | MS.gene63749 | -0.812547 | 4.01E-51 | -1.69E-46 |
| MS.gene052966 | MS.gene63749 | -0.827715 | 1.34E-54 | -1.69E-46 |
| MS.gene053097 | MS.gene63749 | 0.811361 | 7.28E-51 | -1.69E-46 |
| MS.gene053203 | MS.gene63749 | -0.840832 | 6.86E-58 | -1.69E-46 |
| MS.gene053318 | MS.gene63749 | -0.826627 | 2.45E-54 | -1.69E-46 |
| MS.gene053436 | MS.gene63749 | -0.803069 | 4.16E-49 | -1.69E-46 |
| MS.gene053479 | MS.gene63749 | -0.804236 | 2.38E-49 | -1.69E-46 |
| MS.gene053480 | MS.gene63749 | -0.810441 | 1.15E-50 | -1.69E-46 |
| MS.gene053574 | MS.gene63749 | -0.823803 | 1.14E-53 | -1.69E-46 |
| MS.gene053626 | MS.gene63749 | -0.840486 | 8.45E-58 | -1.69E-46 |
| MS.gene053824 | MS.gene63749 | -0.825614 | 4.26E-54 | -1.69E-46 |
| MS.gene054003 | MS.gene63749 | -0.816609 | 5.06E-52 | -1.69E-46 |
| MS.gene054408 | MS.gene63749 | -0.810587 | 1.07E-50 | -1.69E-46 |
| MS.gene054595 | MS.gene63749 | -0.815104 | 1.10E-51 | -1.69E-46 |
| MS.gene05470 | MS.gene63749 | -0.816232 | 6.15E-52 | -1.69E-46 |
| MS.gene054927 | MS.gene63749 | -0.801492 | 8.78E-49 | -1.69E-46 |
| MS.gene055502 | MS.gene63749 | -0.808078 | 3.70E-50 | -1.69E-46 |
| MS.gene055577 | MS.gene63749 | -0.809729 | 1.64E-50 | -1.69E-46 |
| MS.gene055741 | MS.gene63749 | -0.806979 | 6.32E-50 | -1.69E-46 |
| MS.gene055750 | MS.gene63749 | -0.804778 | 1.83E-49 | -1.69E-46 |
| MS.gene05589 | MS.gene63749 | -0.851471 | 8.68E-61 | -1.69E-46 |
| MS.gene056040 | MS.gene63749 | -0.847988 | 8.16E-60 | -1.69E-46 |
| MS.gene056076 | MS.gene63749 | 0.812994 | 3.20E-51 | -1.69E-46 |
| MS.gene056166 | MS.gene63749 | -0.858493 | 7.93E-63 | -1.69E-46 |
| MS.gene056310 | MS.gene63749 | 0.823267 | 1.52E-53 | -1.69E-46 |
| MS.gene056313 | MS.gene63749 | 0.823137 | 1.63E-53 | -1.69E-46 |
| MS.gene056387 | MS.gene63749 | -0.807232 | 5.59E-50 | -1.69E-46 |
| MS.gene056446 | MS.gene63749 | -0.80922 | 2.11E-50 | -1.69E-46 |
| MS.gene056504 | MS.gene63749 | -0.837156 | 6.14E-57 | -1.69E-46 |
| MS.gene056510 | MS.gene63749 | -0.804772 | 1.84E-49 | -1.69E-46 |
| MS.gene056647 | MS.gene63749 | 0.809898 | 1.51E-50 | -1.69E-46 |
| MS.gene056878 | MS.gene63749 | -0.814405 | 1.57E-51 | -1.69E-46 |
| MS.gene057014 | MS.gene63749 | 0.800044 | 1.73E-48 | -1.69E-46 |
| MS.gene057831 | MS.gene63749 | -0.811954 | 5.41E-51 | -1.69E-46 |
| MS.gene05787 | MS.gene63749 | -0.831967 | 1.24E-55 | -1.69E-46 |
| MS.gene058130 | MS.gene63749 | -0.814542 | 1.46E-51 | -1.69E-46 |
| MS.gene058157 | MS.gene63749 | -0.855325 | 6.81E-62 | -1.69E-46 |
| MS.gene058170 | MS.gene63749 | 0.851178 | 1.05E-60 | -1.69E-46 |
| MS.gene058171 | MS.gene63749 | 0.860047 | 2.71E-63 | -1.69E-46 |
| MS.gene058172 | MS.gene63749 | 0.822556 | 2.22E-53 | -1.69E-46 |
| MS.gene058173 | MS.gene63749 | 0.867401 | 1.41E-65 | -1.69E-46 |
| MS.gene058174 | MS.gene63749 | 0.844627 | 6.73E-59 | -1.69E-46 |
| MS.gene058175 | MS.gene63749 | 0.863628 | 2.17E-64 | -1.69E-46 |
| MS.gene05837 | MS.gene63749 | -0.868733 | 5.24E-66 | -1.69E-46 |
| MS.gene058420 | MS.gene63749 | -0.826056 | 3.34E-54 | -1.69E-46 |
| MS.gene059023 | MS.gene63749 | -0.814078 | 1.85E-51 | -1.69E-46 |
| MS.gene059045 | MS.gene63749 | 0.808491 | 3.02E-50 | -1.69E-46 |
| MS.gene059303 | MS.gene63749 | -0.831454 | 1.65E-55 | -1.69E-46 |
| MS.gene059367 | MS.gene63749 | -0.823151 | 1.62E-53 | -1.69E-46 |
| MS.gene059368 | MS.gene63749 | -0.809251 | 2.08E-50 | -1.69E-46 |
| MS.gene059517 | MS.gene63749 | -0.809394 | 1.93E-50 | -1.69E-46 |
| MS.gene059667 | MS.gene63749 | -0.829982 | 3.80E-55 | -1.69E-46 |
| MS.gene059865 | MS.gene63749 | -0.81314 | 2.98E-51 | -1.69E-46 |
| MS.gene05995 | MS.gene63749 | -0.810133 | 1.34E-50 | -1.69E-46 |
| MS.gene05996 | MS.gene63749 | -0.848945 | 4.43E-60 | -1.69E-46 |
| MS.gene06000 | MS.gene63749 | -0.858009 | 1.10E-62 | -1.69E-46 |
| MS.gene060187 | MS.gene63749 | 0.895049 | 1.39E-75 | -1.69E-46 |
| MS.gene060593 | MS.gene63749 | 0.840951 | 6.38E-58 | -1.69E-46 |
| MS.gene060595 | MS.gene63749 | 0.851174 | 1.05E-60 | -1.69E-46 |
| MS.gene060778 | MS.gene63749 | -0.855648 | 5.48E-62 | -1.69E-46 |
| MS.gene06077 | MS.gene63749 | -0.844724 | 6.33E-59 | -1.69E-46 |
| MS.gene060982 | MS.gene63749 | -0.815927 | 7.19E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63749.t1 | MTR_2g076590 | 90.868 | 438 | 38 | 1 | 1 | 436 | 1 | 438 | 0.0 | 811 |
| MS.gene63749.t1 | MTR_2g076490 | 89.908 | 436 | 26 | 1 | 1 | 436 | 1 | 418 | 0.0 | 801 |
| MS.gene63749.t1 | MTR_2g076610 | 81.481 | 297 | 34 | 2 | 89 | 385 | 19 | 294 | 1.72e-172 | 486 |
| MS.gene63749.t1 | MTR_2g076650 | 72.574 | 237 | 47 | 3 | 48 | 282 | 15 | 235 | 1.01e-113 | 334 |
| MS.gene63749.t1 | MTR_1g012550 | 25.587 | 383 | 248 | 12 | 63 | 437 | 65 | 418 | 1.17e-22 | 101 |
| MS.gene63749.t1 | MTR_7g092050 | 27.989 | 368 | 214 | 18 | 60 | 410 | 48 | 381 | 2.76e-21 | 97.4 |
| MS.gene63749.t1 | MTR_7g072460 | 27.246 | 345 | 201 | 13 | 108 | 444 | 99 | 401 | 2.98e-21 | 96.3 |
| MS.gene63749.t1 | MTR_7g058530 | 27.901 | 405 | 242 | 17 | 60 | 441 | 48 | 425 | 4.02e-21 | 97.1 |
| MS.gene63749.t1 | MTR_0280s0040 | 27.804 | 428 | 228 | 22 | 51 | 433 | 38 | 429 | 4.23e-21 | 97.1 |
| MS.gene63749.t1 | MTR_3g031580 | 26.218 | 431 | 271 | 18 | 34 | 446 | 18 | 419 | 1.13e-20 | 95.5 |
| MS.gene63749.t1 | MTR_2g089440 | 29.067 | 375 | 208 | 18 | 93 | 433 | 80 | 430 | 2.52e-20 | 94.4 |
| MS.gene63749.t1 | MTR_3g031640 | 27.569 | 399 | 248 | 16 | 63 | 440 | 42 | 420 | 3.39e-20 | 94.0 |
| MS.gene63749.t1 | MTR_3g031480 | 26.786 | 392 | 239 | 15 | 34 | 403 | 18 | 383 | 5.47e-20 | 93.6 |
| MS.gene63749.t1 | MTR_3g102400 | 28.726 | 369 | 210 | 20 | 60 | 401 | 45 | 387 | 5.70e-20 | 93.6 |
| MS.gene63749.t1 | MTR_3g107070 | 23.438 | 384 | 242 | 10 | 63 | 431 | 41 | 387 | 4.33e-19 | 90.5 |
| MS.gene63749.t1 | MTR_3g031610 | 26.718 | 393 | 249 | 14 | 63 | 436 | 42 | 414 | 6.19e-19 | 90.1 |
| MS.gene63749.t1 | MTR_2g089360 | 28.418 | 373 | 213 | 17 | 93 | 433 | 77 | 427 | 1.41e-18 | 89.0 |
| MS.gene63749.t1 | MTR_2g103810 | 24.219 | 384 | 254 | 14 | 60 | 433 | 56 | 412 | 8.48e-18 | 86.7 |
| MS.gene63749.t1 | MTR_8g465510 | 24.764 | 424 | 252 | 15 | 9 | 401 | 1 | 388 | 1.08e-17 | 86.3 |
| MS.gene63749.t1 | MTR_3g031500 | 26.975 | 367 | 224 | 15 | 96 | 446 | 2 | 340 | 4.61e-17 | 84.3 |
| MS.gene63749.t1 | MTR_1g099400 | 24.105 | 419 | 257 | 16 | 60 | 433 | 33 | 435 | 5.76e-17 | 84.0 |
| MS.gene63749.t1 | MTR_2g011170 | 26.347 | 334 | 199 | 12 | 93 | 401 | 73 | 384 | 1.46e-16 | 82.8 |
| MS.gene63749.t1 | MTR_2g011170 | 26.347 | 334 | 199 | 12 | 93 | 401 | 73 | 384 | 1.47e-16 | 82.4 |
| MS.gene63749.t1 | MTR_3g031600 | 27.047 | 403 | 251 | 16 | 19 | 403 | 2 | 379 | 2.37e-16 | 82.0 |
| MS.gene63749.t1 | MTR_5g067250 | 25.948 | 343 | 205 | 15 | 91 | 407 | 77 | 396 | 2.83e-16 | 82.0 |
| MS.gene63749.t1 | MTR_2g011150 | 27.248 | 367 | 209 | 19 | 63 | 401 | 50 | 386 | 2.85e-16 | 82.0 |
| MS.gene63749.t1 | MTR_8g030500 | 26.585 | 410 | 235 | 21 | 60 | 434 | 31 | 409 | 3.03e-16 | 82.0 |
| MS.gene63749.t1 | MTR_2g080100 | 23.058 | 412 | 253 | 14 | 60 | 450 | 61 | 429 | 4.23e-16 | 81.3 |
| MS.gene63749.t1 | MTR_0090s0020 | 24.796 | 367 | 220 | 13 | 63 | 401 | 44 | 382 | 6.96e-16 | 80.5 |
| MS.gene63749.t1 | MTR_0090s0020 | 24.796 | 367 | 220 | 13 | 63 | 401 | 44 | 382 | 7.48e-16 | 80.5 |
| MS.gene63749.t1 | MTR_0090s0020 | 24.796 | 367 | 220 | 13 | 63 | 401 | 44 | 382 | 8.62e-16 | 80.5 |
| MS.gene63749.t1 | MTR_3g031490 | 25.527 | 427 | 264 | 18 | 34 | 434 | 15 | 413 | 9.47e-16 | 80.1 |
| MS.gene63749.t1 | MTR_0090s0020 | 24.796 | 367 | 220 | 13 | 63 | 401 | 44 | 382 | 1.11e-15 | 80.1 |
| MS.gene63749.t1 | MTR_3g031470 | 39.189 | 148 | 78 | 5 | 63 | 201 | 44 | 188 | 1.90e-15 | 79.3 |
| MS.gene63749.t1 | MTR_8g013600 | 23.961 | 409 | 260 | 14 | 52 | 434 | 40 | 423 | 3.64e-15 | 78.6 |
| MS.gene63749.t1 | MTR_2g011160 | 25.410 | 366 | 217 | 16 | 63 | 401 | 48 | 384 | 4.18e-15 | 78.2 |
| MS.gene63749.t1 | MTR_2g011160 | 25.410 | 366 | 217 | 16 | 63 | 401 | 48 | 384 | 4.72e-15 | 78.2 |
| MS.gene63749.t1 | MTR_5g067290 | 36.552 | 145 | 82 | 5 | 60 | 197 | 49 | 190 | 5.40e-15 | 77.0 |
| MS.gene63749.t1 | MTR_2g080090 | 22.693 | 401 | 249 | 13 | 63 | 442 | 63 | 423 | 1.35e-14 | 76.6 |
| MS.gene63749.t1 | MTR_8g013610 | 24.054 | 370 | 231 | 11 | 93 | 434 | 78 | 425 | 2.54e-14 | 75.9 |
| MS.gene63749.t1 | MTR_8g465410 | 26.509 | 381 | 227 | 16 | 93 | 443 | 74 | 431 | 3.13e-14 | 75.5 |
| MS.gene63749.t1 | MTR_7g056450 | 24.201 | 438 | 232 | 22 | 52 | 439 | 37 | 424 | 3.20e-14 | 75.5 |
| MS.gene63749.t1 | MTR_7g056450 | 24.201 | 438 | 232 | 22 | 52 | 439 | 47 | 434 | 3.43e-14 | 75.1 |
| MS.gene63749.t1 | MTR_8g013560 | 25.148 | 338 | 204 | 14 | 93 | 403 | 77 | 392 | 6.32e-14 | 74.7 |
| MS.gene63749.t1 | MTR_3g007630 | 24.711 | 433 | 256 | 18 | 60 | 449 | 45 | 450 | 9.10e-14 | 73.9 |
| MS.gene63749.t1 | MTR_8g465580 | 25.532 | 376 | 237 | 15 | 93 | 443 | 74 | 431 | 9.26e-14 | 73.9 |
| MS.gene63749.t1 | MTR_6g043510 | 28.090 | 267 | 134 | 12 | 93 | 339 | 72 | 300 | 1.84e-13 | 73.2 |
| MS.gene63749.t1 | MTR_7g103870 | 25.441 | 397 | 235 | 16 | 63 | 433 | 63 | 424 | 2.08e-13 | 72.4 |
| MS.gene63749.t1 | MTR_2g089290 | 34.054 | 185 | 96 | 8 | 93 | 258 | 84 | 261 | 2.21e-13 | 73.2 |
| MS.gene63749.t1 | MTR_2g011180 | 25.000 | 376 | 218 | 18 | 60 | 401 | 46 | 391 | 2.52e-13 | 72.8 |
| MS.gene63749.t1 | MTR_2g011180 | 25.000 | 376 | 218 | 18 | 60 | 401 | 46 | 391 | 2.86e-13 | 72.4 |
| MS.gene63749.t1 | MTR_3g007650 | 25.298 | 419 | 239 | 20 | 60 | 433 | 46 | 435 | 3.28e-13 | 72.4 |
| MS.gene63749.t1 | MTR_8g011410 | 24.927 | 341 | 219 | 15 | 93 | 411 | 80 | 405 | 5.72e-13 | 71.6 |
| MS.gene63749.t1 | MTR_3g020320 | 26.023 | 342 | 188 | 15 | 93 | 401 | 79 | 388 | 5.97e-13 | 71.6 |
| MS.gene63749.t1 | MTR_3g020230 | 25.449 | 334 | 200 | 15 | 93 | 401 | 79 | 388 | 7.33e-13 | 71.2 |
| MS.gene63749.t1 | MTR_8g465990 | 24.699 | 332 | 208 | 14 | 93 | 401 | 77 | 389 | 9.60e-13 | 70.5 |
| MS.gene63749.t1 | MTR_8g465990 | 24.398 | 332 | 209 | 14 | 93 | 401 | 77 | 389 | 1.20e-12 | 70.5 |
| MS.gene63749.t1 | MTR_8g465990 | 24.699 | 332 | 208 | 14 | 93 | 401 | 77 | 389 | 1.21e-12 | 70.5 |
| MS.gene63749.t1 | MTR_1g052880 | 25.054 | 459 | 239 | 26 | 12 | 415 | 7 | 415 | 2.68e-12 | 69.7 |
| MS.gene63749.t1 | MTR_7g056623 | 24.484 | 339 | 208 | 15 | 93 | 404 | 55 | 372 | 5.17e-12 | 68.6 |
| MS.gene63749.t1 | MTR_5g013070 | 23.881 | 402 | 216 | 16 | 63 | 411 | 47 | 411 | 6.08e-12 | 68.2 |
| MS.gene63749.t1 | MTR_4g098890 | 22.535 | 355 | 190 | 15 | 93 | 401 | 652 | 967 | 6.36e-12 | 68.6 |
| MS.gene63749.t1 | MTR_8g465470 | 23.284 | 335 | 207 | 13 | 93 | 401 | 106 | 416 | 6.97e-12 | 68.2 |
| MS.gene63749.t1 | MTR_8g013580 | 25.737 | 373 | 221 | 17 | 93 | 434 | 84 | 431 | 9.63e-12 | 67.8 |
| MS.gene63749.t1 | MTR_3g007510 | 25.729 | 377 | 223 | 16 | 60 | 401 | 44 | 398 | 9.64e-12 | 67.8 |
| MS.gene63749.t1 | MTR_3g007510 | 24.942 | 429 | 261 | 18 | 60 | 449 | 44 | 450 | 9.81e-12 | 67.8 |
| MS.gene63749.t1 | MTR_3g007510 | 25.729 | 377 | 223 | 16 | 60 | 401 | 44 | 398 | 1.10e-11 | 67.4 |
| MS.gene63749.t1 | MTR_4g081665 | 22.785 | 474 | 287 | 23 | 9 | 447 | 1 | 430 | 3.81e-11 | 65.9 |
| MS.gene63749.t1 | MTR_4g081675 | 26.136 | 352 | 183 | 15 | 91 | 401 | 73 | 388 | 4.72e-11 | 65.5 |
| MS.gene63749.t1 | MTR_2g067970 | 28.646 | 192 | 124 | 5 | 39 | 223 | 196 | 381 | 4.84e-11 | 65.5 |
| MS.gene63749.t1 | MTR_8g011370 | 24.363 | 353 | 206 | 13 | 93 | 411 | 80 | 405 | 5.14e-11 | 65.5 |
| MS.gene63749.t1 | MTR_3g020280 | 23.423 | 333 | 211 | 13 | 93 | 401 | 76 | 388 | 9.81e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63749.t1 | AT1G78860 | 47.926 | 434 | 205 | 7 | 15 | 435 | 9 | 434 | 1.52e-139 | 407 |
| MS.gene63749.t1 | AT1G78850 | 46.833 | 442 | 212 | 8 | 8 | 435 | 2 | 434 | 8.63e-139 | 405 |
| MS.gene63749.t1 | AT1G78830 | 42.952 | 454 | 223 | 9 | 9 | 432 | 7 | 454 | 1.36e-119 | 357 |
| MS.gene63749.t1 | AT1G16905 | 43.301 | 418 | 208 | 8 | 28 | 435 | 24 | 422 | 6.16e-115 | 344 |
| MS.gene63749.t1 | AT1G78820 | 41.216 | 444 | 227 | 8 | 19 | 432 | 15 | 454 | 2.92e-112 | 338 |
| MS.gene63749.t1 | AT5G35370 | 27.100 | 369 | 209 | 18 | 93 | 433 | 86 | 422 | 8.18e-24 | 105 |
| MS.gene63749.t1 | AT4G00340 | 26.179 | 424 | 258 | 17 | 54 | 450 | 31 | 426 | 1.97e-21 | 97.8 |
| MS.gene63749.t1 | AT4G00340 | 28.000 | 375 | 223 | 16 | 54 | 408 | 31 | 378 | 5.84e-21 | 96.7 |
| MS.gene63749.t1 | AT4G32300 | 23.861 | 373 | 227 | 14 | 60 | 412 | 52 | 387 | 3.15e-20 | 94.4 |
| MS.gene63749.t1 | AT4G11900 | 26.559 | 433 | 225 | 21 | 63 | 435 | 49 | 448 | 2.82e-19 | 91.3 |
| MS.gene63749.t1 | AT4G11900 | 26.559 | 433 | 225 | 21 | 63 | 435 | 49 | 448 | 2.82e-19 | 91.3 |
| MS.gene63749.t1 | AT4G11900 | 26.682 | 431 | 223 | 21 | 63 | 433 | 49 | 446 | 2.89e-19 | 90.9 |
| MS.gene63749.t1 | AT4G11900 | 26.682 | 431 | 223 | 21 | 63 | 433 | 49 | 446 | 2.89e-19 | 90.9 |
| MS.gene63749.t1 | AT4G11900 | 25.909 | 440 | 219 | 21 | 63 | 435 | 49 | 448 | 3.00e-19 | 91.3 |
| MS.gene63749.t1 | AT4G11900 | 26.682 | 431 | 223 | 21 | 63 | 433 | 49 | 446 | 3.01e-19 | 91.3 |
| MS.gene63749.t1 | AT4G11900 | 26.027 | 438 | 217 | 21 | 63 | 433 | 49 | 446 | 3.06e-19 | 90.9 |
| MS.gene63749.t1 | AT4G11900 | 26.027 | 438 | 217 | 21 | 63 | 433 | 49 | 446 | 3.06e-19 | 90.9 |
| MS.gene63749.t1 | AT3G12000 | 27.733 | 375 | 214 | 18 | 63 | 406 | 56 | 404 | 1.12e-18 | 88.6 |
| MS.gene63749.t1 | AT4G11900 | 26.933 | 401 | 202 | 19 | 93 | 435 | 12 | 379 | 1.28e-18 | 89.0 |
| MS.gene63749.t1 | AT4G11900 | 27.068 | 399 | 200 | 19 | 93 | 433 | 12 | 377 | 1.57e-18 | 89.0 |
| MS.gene63749.t1 | AT4G21390 | 26.126 | 333 | 205 | 14 | 93 | 401 | 79 | 394 | 4.78e-18 | 87.4 |
| MS.gene63749.t1 | AT4G21390 | 26.126 | 333 | 205 | 14 | 93 | 401 | 79 | 394 | 5.55e-18 | 87.4 |
| MS.gene63749.t1 | AT5G03700 | 25.305 | 328 | 211 | 12 | 113 | 433 | 109 | 409 | 9.98e-18 | 85.9 |
| MS.gene63749.t1 | AT1G65790 | 28.354 | 328 | 197 | 14 | 92 | 401 | 78 | 385 | 1.66e-17 | 85.5 |
| MS.gene63749.t1 | AT1G65790 | 28.354 | 328 | 197 | 14 | 92 | 401 | 78 | 385 | 1.66e-17 | 85.5 |
| MS.gene63749.t1 | AT1G65790 | 27.711 | 332 | 194 | 13 | 92 | 401 | 78 | 385 | 2.17e-17 | 85.5 |
| MS.gene63749.t1 | AT5G24080 | 25.628 | 398 | 239 | 17 | 60 | 416 | 49 | 430 | 4.84e-17 | 84.3 |
| MS.gene63749.t1 | AT2G19130 | 24.292 | 424 | 257 | 19 | 51 | 437 | 34 | 430 | 1.55e-15 | 79.7 |
| MS.gene63749.t1 | AT1G11330 | 25.600 | 375 | 225 | 17 | 63 | 405 | 54 | 406 | 5.02e-15 | 78.2 |
| MS.gene63749.t1 | AT1G11330 | 25.600 | 375 | 225 | 17 | 63 | 405 | 54 | 406 | 5.14e-15 | 78.2 |
| MS.gene63749.t1 | AT1G11330 | 25.600 | 375 | 225 | 17 | 63 | 405 | 54 | 406 | 5.47e-15 | 78.2 |
| MS.gene63749.t1 | AT1G11303 | 24.638 | 345 | 199 | 16 | 93 | 403 | 77 | 394 | 1.63e-14 | 76.6 |
| MS.gene63749.t1 | AT4G21380 | 25.749 | 334 | 202 | 12 | 92 | 401 | 80 | 391 | 3.69e-14 | 75.1 |
| MS.gene63749.t1 | AT4G21380 | 25.749 | 334 | 202 | 12 | 92 | 401 | 80 | 391 | 3.98e-14 | 75.5 |
| MS.gene63749.t1 | AT1G11300 | 23.582 | 335 | 209 | 14 | 93 | 400 | 77 | 391 | 1.10e-13 | 73.9 |
| MS.gene63749.t1 | AT1G11300 | 23.582 | 335 | 209 | 14 | 93 | 400 | 77 | 391 | 1.19e-13 | 73.9 |
| MS.gene63749.t1 | AT4G03230 | 26.211 | 351 | 201 | 17 | 113 | 433 | 30 | 352 | 3.78e-13 | 72.4 |
| MS.gene63749.t1 | AT2G41890 | 27.796 | 313 | 187 | 15 | 108 | 406 | 96 | 383 | 9.16e-13 | 70.9 |
| MS.gene63749.t1 | AT1G61380 | 25.581 | 344 | 196 | 16 | 93 | 403 | 70 | 386 | 4.04e-12 | 68.9 |
| MS.gene63749.t1 | AT4G27290 | 23.963 | 434 | 233 | 19 | 12 | 401 | 7 | 387 | 4.13e-12 | 68.9 |
| MS.gene63749.t1 | AT4G27290 | 23.963 | 434 | 233 | 19 | 12 | 401 | 7 | 387 | 4.75e-12 | 68.6 |
| MS.gene63749.t1 | AT1G61370 | 23.145 | 337 | 214 | 11 | 93 | 403 | 74 | 391 | 1.37e-11 | 67.4 |
| MS.gene63749.t1 | AT1G11340 | 25.490 | 357 | 185 | 19 | 93 | 405 | 137 | 456 | 3.30e-11 | 66.2 |
| MS.gene63749.t1 | AT1G11340 | 25.490 | 357 | 185 | 19 | 93 | 405 | 137 | 456 | 3.68e-11 | 65.9 |
| MS.gene63749.t1 | AT1G11340 | 25.490 | 357 | 185 | 19 | 93 | 405 | 69 | 388 | 4.89e-11 | 65.5 |
| MS.gene63749.t1 | AT1G61610 | 24.668 | 377 | 223 | 19 | 60 | 401 | 48 | 398 | 5.62e-11 | 65.5 |
| MS.gene63749.t1 | AT1G61610 | 24.668 | 377 | 223 | 19 | 60 | 401 | 48 | 398 | 6.05e-11 | 65.1 |
| MS.gene63749.t1 | AT1G61390 | 25.507 | 345 | 195 | 19 | 93 | 403 | 91 | 407 | 6.18e-11 | 65.1 |
Find 92 sgRNAs with CRISPR-Local
Find 111 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAGAGAGATGTGGGAAATT+TGG | 0.150939 | 2.1:+23390055 | MS.gene63749:CDS |
| AAAGGCAACAACACCTTTAT+TGG | 0.185484 | 2.1:-23389498 | None:intergenic |
| GATGAAAACCAATATTTAAT+TGG | 0.200636 | 2.1:-23389752 | None:intergenic |
| ACCTTTAAATTTGAAAATTC+AGG | 0.228793 | 2.1:+23389200 | MS.gene63749:CDS |
| CCTCTGGAGAATGGAATATT+TGG | 0.242972 | 2.1:+23390109 | MS.gene63749:CDS |
| CTCCTAAGCCAATTAAATAT+TGG | 0.243041 | 2.1:+23389744 | MS.gene63749:CDS |
| CAGAGAGATGTGGGAAATTT+GGG | 0.259031 | 2.1:+23390056 | MS.gene63749:CDS |
| TGGTCCTTATAGTTTGGTTT+TGG | 0.289630 | 2.1:+23389682 | MS.gene63749:CDS |
| TAATGTGAGAAATGCGAGTT+TGG | 0.290894 | 2.1:-23389123 | None:intergenic |
| GGTAACCCAGTTGGTGAAAA+TGG | 0.292216 | 2.1:+23389398 | MS.gene63749:CDS |
| AATCCATACTCAAAAGATTC+TGG | 0.292898 | 2.1:-23389830 | None:intergenic |
| CAAACAAACACTTCCAATAA+AGG | 0.333204 | 2.1:+23389485 | MS.gene63749:CDS |
| TAATATAAAGCCAAACCTTT+AGG | 0.338248 | 2.1:-23389707 | None:intergenic |
| GTTGCCAATTCTACCACTTC+TGG | 0.338278 | 2.1:+23389863 | MS.gene63749:CDS |
| TATCTTAGGCTTGGAATTGA+TGG | 0.341629 | 2.1:+23389929 | MS.gene63749:CDS |
| AGCAGCTCTTCCGGTGGGTA+TGG | 0.348471 | 2.1:+23389363 | MS.gene63749:CDS |
| TGTTGATGGTCCTTATAGTT+TGG | 0.357941 | 2.1:+23389676 | MS.gene63749:CDS |
| ATAAAGGTGTTGTTGCCTTT+AGG | 0.359229 | 2.1:+23389501 | MS.gene63749:CDS |
| AAGTGTAGTCCTAAGCCTTT+AGG | 0.361000 | 2.1:+23390142 | MS.gene63749:CDS |
| GGCTCCAAAACCAAACTATA+AGG | 0.363469 | 2.1:-23389686 | None:intergenic |
| GCAAATCCAGGTCCCTTATT+AGG | 0.366363 | 2.1:-23390403 | None:intergenic |
| GATCAATATTTAAAACCTAA+TGG | 0.372051 | 2.1:+23389614 | MS.gene63749:CDS |
| GGACCATACATAGTAGAATA+TGG | 0.381946 | 2.1:+23389230 | MS.gene63749:CDS |
| TTAAATATTGATCAACCAAA+AGG | 0.385064 | 2.1:-23389604 | None:intergenic |
| GTCCTTCAAAACTTGTTAGT+AGG | 0.397669 | 2.1:+23389636 | MS.gene63749:CDS |
| ATAGTACCTTAACATATCTT+AGG | 0.400121 | 2.1:+23389915 | MS.gene63749:CDS |
| TCATCCTACAGATACCCTTT+TGG | 0.400336 | 2.1:+23389589 | MS.gene63749:CDS |
| AGGGCTAAAGTGAAGGCATT+TGG | 0.408888 | 2.1:-23389317 | None:intergenic |
| ACTACCAGAAGTGGTAGAAT+TGG | 0.411324 | 2.1:-23389867 | None:intergenic |
| TTTATTAAGGTGCCTAATAA+GGG | 0.413919 | 2.1:+23390391 | MS.gene63749:CDS |
| TTTGAAAATTCAGGTGAACT+TGG | 0.414357 | 2.1:+23389209 | MS.gene63749:CDS |
| GCCTTTAGGTTACTCTCAAA+TGG | 0.414987 | 2.1:+23389515 | MS.gene63749:CDS |
| CCAAATTTCCCACATCTCTC+TGG | 0.417212 | 2.1:-23390055 | None:intergenic |
| AACGATCGGAGCAGCTCTTC+CGG | 0.424012 | 2.1:+23389354 | MS.gene63749:CDS |
| TTTCATTACTACAAAATTGA+AGG | 0.426055 | 2.1:+23390187 | MS.gene63749:CDS |
| TAGATGTGCGTAGTGGTGTT+TGG | 0.435236 | 2.1:+23389978 | MS.gene63749:CDS |
| ACCTTAACATATCTTAGGCT+TGG | 0.444137 | 2.1:+23389920 | MS.gene63749:CDS |
| TCCAAGCCTAAGATATGTTA+AGG | 0.448009 | 2.1:-23389921 | None:intergenic |
| GCCAACACACTTACAATCCT+TGG | 0.454150 | 2.1:-23390281 | None:intergenic |
| CCTCCATATTCTACTATGTA+TGG | 0.457838 | 2.1:-23389233 | None:intergenic |
| TTCACTTTAGCCCTTCGAAT+CGG | 0.459599 | 2.1:+23389326 | MS.gene63749:CDS |
| AACCAATATTTAATTGGCTT+AGG | 0.460614 | 2.1:-23389746 | None:intergenic |
| AATGTGAGAAATGCGAGTTT+GGG | 0.465153 | 2.1:-23389122 | None:intergenic |
| ACTTCTGGTAGTAGTATCAT+TGG | 0.485293 | 2.1:+23389878 | MS.gene63749:CDS |
| GCAGCTCTTCCGGTGGGTAT+GGG | 0.492435 | 2.1:+23389364 | MS.gene63749:CDS |
| TTCAATGCTCCATTCCAAGT+TGG | 0.505787 | 2.1:+23389278 | MS.gene63749:CDS |
| CATACTCCTCCTAAAGGCTT+AGG | 0.506091 | 2.1:-23390151 | None:intergenic |
| AACACCTTGAGTTATCTTTG+TGG | 0.506678 | 2.1:-23390312 | None:intergenic |
| TTTACAACTGAAGCAAATCC+AGG | 0.507847 | 2.1:-23390415 | None:intergenic |
| TAAATATTGATCAACCAAAA+GGG | 0.511119 | 2.1:-23389603 | None:intergenic |
| ACCATTTGAGAGTAACCTAA+AGG | 0.511899 | 2.1:-23389516 | None:intergenic |
| ATCGTTGAAGTCCGATTCGA+AGG | 0.516738 | 2.1:-23389337 | None:intergenic |
| GTTAAGGTACTATTATTCAC+TGG | 0.525455 | 2.1:-23389905 | None:intergenic |
| ATGCTGATGGAAGAATTGTT+TGG | 0.528512 | 2.1:+23389462 | MS.gene63749:CDS |
| CTTGTGTTGGCTAATGCTGA+TGG | 0.532407 | 2.1:+23389449 | MS.gene63749:CDS |
| TCAATGTGTTGGTTGTCCTC+TGG | 0.535016 | 2.1:+23390093 | MS.gene63749:CDS |
| TACATGAGTAAATACACTAC+TGG | 0.539734 | 2.1:+23390220 | MS.gene63749:CDS |
| GTTGGTTGTCCTCTGGAGAA+TGG | 0.544761 | 2.1:+23390100 | MS.gene63749:CDS |
| GCATTGCATACTCCTCCTAA+AGG | 0.549299 | 2.1:-23390157 | None:intergenic |
| TGGAGAATGGAATATTTGGT+TGG | 0.554960 | 2.1:+23390113 | MS.gene63749:CDS |
| GTCAATTGCCAGAGAGATGT+GGG | 0.558292 | 2.1:+23390047 | MS.gene63749:CDS |
| TGTGAGGATAATCAATGTGT+TGG | 0.560707 | 2.1:+23390082 | MS.gene63749:CDS |
| AATTGCATGAGCAATTAAGA+TGG | 0.563809 | 2.1:-23389162 | None:intergenic |
| AATGATACTACTACCAGAAG+TGG | 0.564751 | 2.1:-23389876 | None:intergenic |
| ACAAAGATAACTCAAGGTGT+TGG | 0.569098 | 2.1:+23390314 | MS.gene63749:CDS |
| CTGGTAGTAGTATCATTGGT+AGG | 0.581267 | 2.1:+23389882 | MS.gene63749:CDS |
| GATTCGAAGGGCTAAAGTGA+AGG | 0.591835 | 2.1:-23389324 | None:intergenic |
| CTTAATAAAACCCACGTGTG+TGG | 0.596724 | 2.1:-23390377 | None:intergenic |
| GATCGGAGCAGCTCTTCCGG+TGG | 0.597266 | 2.1:+23389357 | MS.gene63749:CDS |
| TGCTGATGGAAATCTTGTGT+TGG | 0.597497 | 2.1:+23389436 | MS.gene63749:CDS |
| TGTAGTCCTAAGCCTTTAGG+AGG | 0.598203 | 2.1:+23390145 | MS.gene63749:CDS |
| GTTACTCTCAAATGGTAACA+TGG | 0.602406 | 2.1:+23389523 | MS.gene63749:CDS |
| TATTTGCTTCCCATACCCAC+CGG | 0.610779 | 2.1:-23389373 | None:intergenic |
| TGGGAAATTTGGGCTTTGTG+AGG | 0.614311 | 2.1:+23390066 | MS.gene63749:CDS |
| GCAAATAGAGGTAACCCAGT+TGG | 0.619075 | 2.1:+23389389 | MS.gene63749:CDS |
| CTTTGATGAAGATGAAGATG+AGG | 0.619730 | 2.1:+23390018 | MS.gene63749:CDS |
| ATCGGAGCAGCTCTTCCGGT+GGG | 0.626587 | 2.1:+23389358 | MS.gene63749:CDS |
| AAGGTGCCTAATAAGGGACC+TGG | 0.628050 | 2.1:+23390397 | MS.gene63749:CDS |
| TCTACCACAAAGATAACTCA+AGG | 0.628662 | 2.1:+23390308 | MS.gene63749:CDS |
| TGGGTATGGGAAGCAAATAG+AGG | 0.632819 | 2.1:+23389377 | MS.gene63749:CDS |
| TGTCAATTGCCAGAGAGATG+TGG | 0.634284 | 2.1:+23390046 | MS.gene63749:CDS |
| TCAACCAAAAGGGTATCTGT+AGG | 0.635839 | 2.1:-23389593 | None:intergenic |
| ACCAAGGATTGTAAGTGTGT+TGG | 0.640719 | 2.1:+23390280 | MS.gene63749:CDS |
| TCGAATCGGACTTCAACGAT+CGG | 0.646165 | 2.1:+23389340 | MS.gene63749:CDS |
| TCGTTGAAGTCCGATTCGAA+GGG | 0.657162 | 2.1:-23389336 | None:intergenic |
| TTGTGCAAATAAATGTACCA+AGG | 0.661724 | 2.1:+23390264 | MS.gene63749:CDS |
| CCAAATATTCCATTCTCCAG+AGG | 0.664062 | 2.1:-23390109 | None:intergenic |
| TATTTCTTAGATGTGCGTAG+TGG | 0.673826 | 2.1:+23389971 | MS.gene63749:CDS |
| AGTTGAAAATACCACACACG+TGG | 0.689573 | 2.1:+23390366 | MS.gene63749:CDS |
| TTTGATGAAGATGAAGATGA+GGG | 0.690735 | 2.1:+23390019 | MS.gene63749:CDS |
| CCATACATAGTAGAATATGG+AGG | 0.706710 | 2.1:+23389233 | MS.gene63749:CDS |
| GTTGAAAATACCACACACGT+GGG | 0.740438 | 2.1:+23390367 | MS.gene63749:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACCTTTAAATTTGAAAATTC+AGG | + | chr2.1:23389200-23389219 | MS.gene63749:CDS | 20.0% |
| !! | GATGAAAACCAATATTTAAT+TGG | - | chr2.1:23389755-23389774 | None:intergenic | 20.0% |
| !! | TAAATATTGATCAACCAAAA+GGG | - | chr2.1:23389606-23389625 | None:intergenic | 20.0% |
| !! | TTAAATATTGATCAACCAAA+AGG | - | chr2.1:23389607-23389626 | None:intergenic | 20.0% |
| !! | TTTCATTACTACAAAATTGA+AGG | + | chr2.1:23390187-23390206 | MS.gene63749:CDS | 20.0% |
| !!! | AATTTAAAGGTTTCATTTTG+TGG | - | chr2.1:23389191-23389210 | None:intergenic | 20.0% |
| !!! | ACCTGAATTTTCAAATTTAA+AGG | - | chr2.1:23389204-23389223 | None:intergenic | 20.0% |
| !!! | ATGGTTTTAATTGATACTAA+AGG | + | chr2.1:23389542-23389561 | MS.gene63749:CDS | 20.0% |
| !!! | GATCAATATTTAAAACCTAA+TGG | + | chr2.1:23389614-23389633 | MS.gene63749:CDS | 20.0% |
| !!! | TCTTTGTTTTCATTTGAAAA+AGG | + | chr2.1:23389776-23389795 | MS.gene63749:CDS | 20.0% |
| ! | ATAGTACCTTAACATATCTT+AGG | + | chr2.1:23389915-23389934 | MS.gene63749:CDS | 25.0% |
| ! | TAATATAAAGCCAAACCTTT+AGG | - | chr2.1:23389710-23389729 | None:intergenic | 25.0% |
| ! | TCAGAAAAAGAAAATGTTGA+TGG | + | chr2.1:23389662-23389681 | MS.gene63749:CDS | 25.0% |
| !! | AACCAATATTTAATTGGCTT+AGG | - | chr2.1:23389749-23389768 | None:intergenic | 25.0% |
| !! | TTTATTAAGGTGCCTAATAA+GGG | + | chr2.1:23390391-23390410 | MS.gene63749:CDS | 25.0% |
| !!! | ATACTAAAGGTAGTTTTGTT+TGG | + | chr2.1:23389555-23389574 | MS.gene63749:CDS | 25.0% |
| !!! | GAAAATGGTACTTTTTCATT+AGG | + | chr2.1:23389413-23389432 | MS.gene63749:CDS | 25.0% |
| !!! | TTTTATTAAGGTGCCTAATA+AGG | + | chr2.1:23390390-23390409 | MS.gene63749:CDS | 25.0% |
| AATCCATACTCAAAAGATTC+TGG | - | chr2.1:23389833-23389852 | None:intergenic | 30.0% | |
| AATTGCATGAGCAATTAAGA+TGG | - | chr2.1:23389165-23389184 | None:intergenic | 30.0% | |
| CAAACAAACACTTCCAATAA+AGG | + | chr2.1:23389485-23389504 | MS.gene63749:CDS | 30.0% | |
| CTCCTAAGCCAATTAAATAT+TGG | + | chr2.1:23389744-23389763 | MS.gene63749:CDS | 30.0% | |
| TACATGAGTAAATACACTAC+TGG | + | chr2.1:23390220-23390239 | MS.gene63749:CDS | 30.0% | |
| TAGTGTTGTAAAAACCAACT+TGG | - | chr2.1:23389295-23389314 | None:intergenic | 30.0% | |
| TTGTAAAAACCAACTTGGAA+TGG | - | chr2.1:23389290-23389309 | None:intergenic | 30.0% | |
| TTGTGCAAATAAATGTACCA+AGG | + | chr2.1:23390264-23390283 | MS.gene63749:CDS | 30.0% | |
| TTTGAAAATTCAGGTGAACT+TGG | + | chr2.1:23389209-23389228 | MS.gene63749:CDS | 30.0% | |
| TTTGATGAAGATGAAGATGA+GGG | + | chr2.1:23390019-23390038 | MS.gene63749:CDS | 30.0% | |
| ! | GTTAAGGTACTATTATTCAC+TGG | - | chr2.1:23389908-23389927 | None:intergenic | 30.0% |
| AAAGGCAACAACACCTTTAT+TGG | - | chr2.1:23389501-23389520 | None:intergenic | 35.0% | |
| AACACCTTGAGTTATCTTTG+TGG | - | chr2.1:23390315-23390334 | None:intergenic | 35.0% | |
| AATGATACTACTACCAGAAG+TGG | - | chr2.1:23389879-23389898 | None:intergenic | 35.0% | |
| AATGTGAGAAATGCGAGTTT+GGG | - | chr2.1:23389125-23389144 | None:intergenic | 35.0% | |
| ACAAAGATAACTCAAGGTGT+TGG | + | chr2.1:23390314-23390333 | MS.gene63749:CDS | 35.0% | |
| ACCATTTGAGAGTAACCTAA+AGG | - | chr2.1:23389519-23389538 | None:intergenic | 35.0% | |
| ACCTTAACATATCTTAGGCT+TGG | + | chr2.1:23389920-23389939 | MS.gene63749:CDS | 35.0% | |
| ACTTCTGGTAGTAGTATCAT+TGG | + | chr2.1:23389878-23389897 | MS.gene63749:CDS | 35.0% | |
| ATGCTGATGGAAGAATTGTT+TGG | + | chr2.1:23389462-23389481 | MS.gene63749:CDS | 35.0% | |
| CCATACATAGTAGAATATGG+AGG | + | chr2.1:23389233-23389252 | MS.gene63749:CDS | 35.0% | |
| CCTCCATATTCTACTATGTA+TGG | - | chr2.1:23389236-23389255 | None:intergenic | 35.0% | |
| CTTTGATGAAGATGAAGATG+AGG | + | chr2.1:23390018-23390037 | MS.gene63749:CDS | 35.0% | |
| GGACCATACATAGTAGAATA+TGG | + | chr2.1:23389230-23389249 | MS.gene63749:CDS | 35.0% | |
| GTTACTCTCAAATGGTAACA+TGG | + | chr2.1:23389523-23389542 | MS.gene63749:CDS | 35.0% | |
| TAATGTGAGAAATGCGAGTT+TGG | - | chr2.1:23389126-23389145 | None:intergenic | 35.0% | |
| TATCTTAGGCTTGGAATTGA+TGG | + | chr2.1:23389929-23389948 | MS.gene63749:CDS | 35.0% | |
| TATTTCTTAGATGTGCGTAG+TGG | + | chr2.1:23389971-23389990 | MS.gene63749:CDS | 35.0% | |
| TCCAAGCCTAAGATATGTTA+AGG | - | chr2.1:23389924-23389943 | None:intergenic | 35.0% | |
| TCTACCACAAAGATAACTCA+AGG | + | chr2.1:23390308-23390327 | MS.gene63749:CDS | 35.0% | |
| TGGAGAATGGAATATTTGGT+TGG | + | chr2.1:23390113-23390132 | MS.gene63749:CDS | 35.0% | |
| TGTGAGGATAATCAATGTGT+TGG | + | chr2.1:23390082-23390101 | MS.gene63749:CDS | 35.0% | |
| TTTACAACTGAAGCAAATCC+AGG | - | chr2.1:23390418-23390437 | None:intergenic | 35.0% | |
| ! | AAGTACCATTTTCACCAACT+GGG | - | chr2.1:23389406-23389425 | None:intergenic | 35.0% |
| !! | AAAGTACCATTTTCACCAAC+TGG | - | chr2.1:23389407-23389426 | None:intergenic | 35.0% |
| !! | AGCCTACTAACAAGTTTTGA+AGG | - | chr2.1:23389641-23389660 | None:intergenic | 35.0% |
| !! | ATAAAGGTGTTGTTGCCTTT+AGG | + | chr2.1:23389501-23389520 | MS.gene63749:CDS | 35.0% |
| !! | GATCCAGAATCTTTTGAGTA+TGG | + | chr2.1:23389827-23389846 | MS.gene63749:CDS | 35.0% |
| !! | GTCCTTCAAAACTTGTTAGT+AGG | + | chr2.1:23389636-23389655 | MS.gene63749:CDS | 35.0% |
| !! | TGGTCCTTATAGTTTGGTTT+TGG | + | chr2.1:23389682-23389701 | MS.gene63749:CDS | 35.0% |
| !! | TGTTGATGGTCCTTATAGTT+TGG | + | chr2.1:23389676-23389695 | MS.gene63749:CDS | 35.0% |
| !!! | ACAAGTTTTGAAGGACCATT+AGG | - | chr2.1:23389632-23389651 | None:intergenic | 35.0% |
| !!! | ACTTTTTCATTAGGTGCTGA+TGG | + | chr2.1:23389422-23389441 | MS.gene63749:CDS | 35.0% |
| AAGTGTAGTCCTAAGCCTTT+AGG | + | chr2.1:23390142-23390161 | MS.gene63749:CDS | 40.0% | |
| ACCAAGGATTGTAAGTGTGT+TGG | + | chr2.1:23390280-23390299 | MS.gene63749:CDS | 40.0% | |
| ACTACCAGAAGTGGTAGAAT+TGG | - | chr2.1:23389870-23389889 | None:intergenic | 40.0% | |
| AGTTGAAAATACCACACACG+TGG | + | chr2.1:23390366-23390385 | MS.gene63749:CDS | 40.0% | |
| CAGAGAGATGTGGGAAATTT+GGG | + | chr2.1:23390056-23390075 | MS.gene63749:CDS | 40.0% | |
| CCAAATATTCCATTCTCCAG+AGG | - | chr2.1:23390112-23390131 | None:intergenic | 40.0% | |
| CTGGTAGTAGTATCATTGGT+AGG | + | chr2.1:23389882-23389901 | MS.gene63749:CDS | 40.0% | |
| CTTAATAAAACCCACGTGTG+TGG | - | chr2.1:23390380-23390399 | None:intergenic | 40.0% | |
| GGCTCCAAAACCAAACTATA+AGG | - | chr2.1:23389689-23389708 | None:intergenic | 40.0% | |
| GTTGAAAATACCACACACGT+GGG | + | chr2.1:23390367-23390386 | MS.gene63749:CDS | 40.0% | |
| TGCTGATGGAAATCTTGTGT+TGG | + | chr2.1:23389436-23389455 | MS.gene63749:CDS | 40.0% | |
| TTCAATGCTCCATTCCAAGT+TGG | + | chr2.1:23389278-23389297 | MS.gene63749:CDS | 40.0% | |
| TTCACTTTAGCCCTTCGAAT+CGG | + | chr2.1:23389326-23389345 | MS.gene63749:CDS | 40.0% | |
| ! | CCTCTGGAGAATGGAATATT+TGG | + | chr2.1:23390109-23390128 | MS.gene63749:CDS | 40.0% |
| ! | GCCTTTAGGTTACTCTCAAA+TGG | + | chr2.1:23389515-23389534 | MS.gene63749:CDS | 40.0% |
| ! | TCATCCTACAGATACCCTTT+TGG | + | chr2.1:23389589-23389608 | MS.gene63749:CDS | 40.0% |
| !! | TCAACCAAAAGGGTATCTGT+AGG | - | chr2.1:23389596-23389615 | None:intergenic | 40.0% |
| !!! | AGTTTGGTTTTGGAGCCTAA+AGG | + | chr2.1:23389692-23389711 | MS.gene63749:CDS | 40.0% |
| !!! | CACACACGTGGGTTTTATTA+AGG | + | chr2.1:23390378-23390397 | MS.gene63749:CDS | 40.0% |
| CATACTCCTCCTAAAGGCTT+AGG | - | chr2.1:23390154-23390173 | None:intergenic | 45.0% | |
| CCAAATTTCCCACATCTCTC+TGG | - | chr2.1:23390058-23390077 | None:intergenic | 45.0% | |
| CCAGAGAGATGTGGGAAATT+TGG | + | chr2.1:23390055-23390074 | MS.gene63749:CDS | 45.0% | |
| GATTCGAAGGGCTAAAGTGA+AGG | - | chr2.1:23389327-23389346 | None:intergenic | 45.0% | |
| GCAAATAGAGGTAACCCAGT+TGG | + | chr2.1:23389389-23389408 | MS.gene63749:CDS | 45.0% | |
| GCAAATCCAGGTCCCTTATT+AGG | - | chr2.1:23390406-23390425 | None:intergenic | 45.0% | |
| GCATTGCATACTCCTCCTAA+AGG | - | chr2.1:23390160-23390179 | None:intergenic | 45.0% | |
| GCCAACACACTTACAATCCT+TGG | - | chr2.1:23390284-23390303 | None:intergenic | 45.0% | |
| GTCAATTGCCAGAGAGATGT+GGG | + | chr2.1:23390047-23390066 | MS.gene63749:CDS | 45.0% | |
| GTTGCCAATTCTACCACTTC+TGG | + | chr2.1:23389863-23389882 | MS.gene63749:CDS | 45.0% | |
| TAGATGTGCGTAGTGGTGTT+TGG | + | chr2.1:23389978-23389997 | MS.gene63749:CDS | 45.0% | |
| TATTTGCTTCCCATACCCAC+CGG | - | chr2.1:23389376-23389395 | None:intergenic | 45.0% | |
| TCGAATCGGACTTCAACGAT+CGG | + | chr2.1:23389340-23389359 | MS.gene63749:CDS | 45.0% | |
| TGGGTATGGGAAGCAAATAG+AGG | + | chr2.1:23389377-23389396 | MS.gene63749:CDS | 45.0% | |
| TGTAGTCCTAAGCCTTTAGG+AGG | + | chr2.1:23390145-23390164 | MS.gene63749:CDS | 45.0% | |
| TGTCAATTGCCAGAGAGATG+TGG | + | chr2.1:23390046-23390065 | MS.gene63749:CDS | 45.0% | |
| ! | ATCGTTGAAGTCCGATTCGA+AGG | - | chr2.1:23389340-23389359 | None:intergenic | 45.0% |
| ! | TCGTTGAAGTCCGATTCGAA+GGG | - | chr2.1:23389339-23389358 | None:intergenic | 45.0% |
| ! | TGGGAAATTTGGGCTTTGTG+AGG | + | chr2.1:23390066-23390085 | MS.gene63749:CDS | 45.0% |
| !! | AGGGCTAAAGTGAAGGCATT+TGG | - | chr2.1:23389320-23389339 | None:intergenic | 45.0% |
| !! | CTTGTGTTGGCTAATGCTGA+TGG | + | chr2.1:23389449-23389468 | MS.gene63749:CDS | 45.0% |
| !! | GGTAACCCAGTTGGTGAAAA+TGG | + | chr2.1:23389398-23389417 | MS.gene63749:CDS | 45.0% |
| !! | TCAATGTGTTGGTTGTCCTC+TGG | + | chr2.1:23390093-23390112 | MS.gene63749:CDS | 45.0% |
| !!! | GGTTTTGGAGCCTAAAGGTT+TGG | + | chr2.1:23389697-23389716 | MS.gene63749:CDS | 45.0% |
| ! | AAGGTGCCTAATAAGGGACC+TGG | + | chr2.1:23390397-23390416 | MS.gene63749:CDS | 50.0% |
| ! | GTTGGTTGTCCTCTGGAGAA+TGG | + | chr2.1:23390100-23390119 | MS.gene63749:CDS | 50.0% |
| AACGATCGGAGCAGCTCTTC+CGG | + | chr2.1:23389354-23389373 | MS.gene63749:CDS | 55.0% | |
| AGCAGCTCTTCCGGTGGGTA+TGG | + | chr2.1:23389363-23389382 | MS.gene63749:CDS | 60.0% | |
| ATCGGAGCAGCTCTTCCGGT+GGG | + | chr2.1:23389358-23389377 | MS.gene63749:CDS | 60.0% | |
| GCAGCTCTTCCGGTGGGTAT+GGG | + | chr2.1:23389364-23389383 | MS.gene63749:CDS | 60.0% | |
| GATCGGAGCAGCTCTTCCGG+TGG | + | chr2.1:23389357-23389376 | MS.gene63749:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.1 | gene | 23389104 | 23390459 | 23389104 | ID=MS.gene63749 |
| chr2.1 | mRNA | 23389104 | 23390459 | 23389104 | ID=MS.gene63749.t1;Parent=MS.gene63749 |
| chr2.1 | exon | 23389104 | 23390459 | 23389104 | ID=MS.gene63749.t1.exon1;Parent=MS.gene63749.t1 |
| chr2.1 | CDS | 23389104 | 23390459 | 23389104 | ID=cds.MS.gene63749.t1;Parent=MS.gene63749.t1 |
| Gene Sequence |
| Protein sequence |
