AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene65057


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene65057.t1 MTR_7g057180 93.867 375 21 1 1 373 1 375 0.0 682
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene65057.t1 AT4G13150 62.025 316 109 2 56 371 39 343 1.94e-135 390
MS.gene65057.t1 AT4G13150 56.809 257 100 2 56 312 39 284 7.47e-97 290
MS.gene65057.t1 AT4G13150 57.661 248 94 2 56 303 39 275 3.61e-95 285
MS.gene65057.t1 AT4G13150 55.459 229 91 2 56 284 39 256 1.46e-82 252
MS.gene65057.t1 AT4G13150 55.459 229 91 2 56 284 39 256 1.46e-82 252

Find 80 sgRNAs with CRISPR-Local

Find 334 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTGAAGAGGCTTTAAATATT+TGG 0.131301 7.1:-43937008 MS.gene65057:CDS
CAACCGTTCTATGGGTTTAT+TGG 0.170728 7.1:-43936794 MS.gene65057:intron
CTCATAGGTTGTTTGCAAAT+TGG 0.186446 7.1:-43939337 MS.gene65057:CDS
CAAAAGTATGGCAATCTTAT+TGG 0.194129 7.1:-43936052 MS.gene65057:CDS
GAAAAGCTTCCCCAAGTAAA+AGG 0.226285 7.1:+43936662 None:intergenic
GATCTACTTCTGGTTGCTTA+TGG 0.241388 7.1:-43937055 MS.gene65057:CDS
TATGGCAATCTTATTGGTTT+TGG 0.243971 7.1:-43936046 MS.gene65057:intron
ACATCATATCAACCGTTCTA+TGG 0.263168 7.1:-43936803 MS.gene65057:CDS
TCTGTTCACACTTTCCATTC+AGG 0.270300 7.1:-43935461 MS.gene65057:intron
AACCCTACAGCTTTCCTTGC+AGG 0.276788 7.1:-43935868 MS.gene65057:CDS
GTTCTTTAGCTTTCCCTCAT+AGG 0.297029 7.1:-43939352 MS.gene65057:CDS
CCTGCAGATGGATCTACTTC+TGG 0.300381 7.1:-43937065 MS.gene65057:intron
ATTCGCCAACAGCCTATTCT+AGG 0.301647 7.1:-43937729 MS.gene65057:CDS
TGAAGAGGCTTTAAATATTT+GGG 0.312257 7.1:-43937007 MS.gene65057:intron
CAAGACAGAGATCCCGTTCC+TGG 0.337367 7.1:-43937802 MS.gene65057:CDS
ATATGTGATCAGCTTGGAAT+AGG 0.354232 7.1:-43935324 MS.gene65057:intron
CACACGTTTCGAATCTCTTC+AGG 0.358598 7.1:-43939304 MS.gene65057:intron
TCACATTATTATTACCATTA+CGG 0.360639 7.1:+43935254 None:intergenic
TTGCTTATGGCTGCAGGTTG+TGG 0.367697 7.1:-43937042 MS.gene65057:CDS
TTCTGGTTGCTTATGGCTGC+AGG 0.373324 7.1:-43937048 MS.gene65057:CDS
TTACGAGGCGTTAAAATCTA+AGG 0.373703 7.1:-43937883 MS.gene65057:CDS
GCAGTTGCTCCTGTTGCTGC+TGG 0.381855 7.1:-43937660 MS.gene65057:CDS
GTTGAAGCAGCCACAGCATA+TGG 0.393534 7.1:+43935139 None:intergenic
ACAGACGTTGTACAAAAGTA+TGG 0.398457 7.1:-43936064 MS.gene65057:CDS
AGCTTTCCTTGCAGGAGCCT+TGG 0.416636 7.1:-43935860 MS.gene65057:intron
GTGCTTCATATTCACCTGAA+TGG 0.419254 7.1:+43935447 None:intergenic
GCAGTTGAACGATTCTCTCT+TGG 0.419870 7.1:-43935898 MS.gene65057:intron
AATGGCCCACATGAGAAAAC+AGG 0.436765 7.1:+43939440 None:intergenic
ATCCCGTTCCTGGCTATGAT+TGG 0.436950 7.1:-43937792 MS.gene65057:CDS
CAATTTGCAAACAACCTATG+AGG 0.457657 7.1:+43939338 None:intergenic
TTCCAATCATAGCCAGGAAC+GGG 0.459338 7.1:+43937790 None:intergenic
CATCTGCTGATGTTACTTCA+AGG 0.466645 7.1:-43936626 MS.gene65057:CDS
AAAGTGAAACCAGCAGCAAC+AGG 0.472516 7.1:+43937651 None:intergenic
ATATCGGCCGTTCCCTCAAA+AGG 0.477162 7.1:+43935298 None:intergenic
AGAATTGAGGTGCAAACAAA+TGG 0.492047 7.1:-43937840 MS.gene65057:CDS
CATCATATCAACCGTTCTAT+GGG 0.493913 7.1:-43936802 MS.gene65057:CDS
ACAACCTCTGAGATTGATTG+TGG 0.494981 7.1:+43939406 None:intergenic
ATAATTCCGCAATGTGCACC+AGG 0.498074 7.1:-43937606 MS.gene65057:CDS
GCTATGATTGGAATTGCGTT+AGG 0.509024 7.1:-43937780 MS.gene65057:CDS
TTCTGTCTCTCGACGGAACA+TGG 0.512776 7.1:-43936863 MS.gene65057:CDS
AAAAGCTTCCCCAAGTAAAA+GGG 0.514440 7.1:+43936663 None:intergenic
CTAAACAGTCTAACAGTGAC+AGG 0.521851 7.1:+43939374 None:intergenic
CCGGACGGTGATCCTAGAAT+AGG 0.524305 7.1:+43937717 None:intergenic
TGCTACTGTTGCAACCGTAA+TGG 0.527813 7.1:-43935268 MS.gene65057:intron
AACAGGAGCAACTGCTGAAG+AGG 0.528098 7.1:+43937668 None:intergenic
ACAGTAGCAAGAGCAAATAT+CGG 0.534072 7.1:+43935282 None:intergenic
CATTTGCTGAATCTTTCTCA+AGG 0.539846 7.1:-43936836 MS.gene65057:CDS
ATGCTCTAAACATGAGGGTG+AGG 0.546750 7.1:-43937910 MS.gene65057:CDS
ACGCAATTCCAATCATAGCC+AGG 0.561603 7.1:+43937784 None:intergenic
CTCCTGCAAGGAAAGCTGTA+GGG 0.562405 7.1:+43935866 None:intergenic
TAGAATAGGCTGTTGGCGAA+TGG 0.565403 7.1:+43937731 None:intergenic
CAACCTCTGAGATTGATTGT+GGG 0.566279 7.1:+43939407 None:intergenic
GCTCCTGCAAGGAAAGCTGT+AGG 0.568204 7.1:+43935865 None:intergenic
GTGCAAACAAATGGTAAAGA+GGG 0.571852 7.1:-43937831 MS.gene65057:CDS
AATTTGCAAACAACCTATGA+GGG 0.573647 7.1:+43939339 None:intergenic
TGGTGTCAACAGTTAGGCAT+TGG 0.575572 7.1:-43936109 MS.gene65057:intron
GGTGCAAACAAATGGTAAAG+AGG 0.578480 7.1:-43937832 MS.gene65057:CDS
TTCTGACAGAATCTGTAGAC+CGG 0.587906 7.1:+43937698 None:intergenic
AATTAAATGCTCTAAACATG+AGG 0.593823 7.1:-43937916 MS.gene65057:CDS
AGAACGGTTGATATGATGTA+CGG 0.594967 7.1:+43936807 None:intergenic
GTTAGGCATTGGTAAAGAGA+AGG 0.598947 7.1:-43936098 MS.gene65057:CDS
CACTAACCAAGGCTCCTGCA+AGG 0.600373 7.1:+43935854 None:intergenic
ATTCCAATCATAGCCAGGAA+CGG 0.601656 7.1:+43937789 None:intergenic
ATTAAATGCTCTAAACATGA+GGG 0.602499 7.1:-43937915 MS.gene65057:CDS
ATCTGCTGATGTTACTTCAA+GGG 0.608875 7.1:-43936625 MS.gene65057:intron
GTGATCCTAGAATAGGCTGT+TGG 0.615355 7.1:+43937724 None:intergenic
CCTATTCTAGGATCACCGTC+CGG 0.623663 7.1:-43937717 MS.gene65057:CDS
GACAGAATCTGTAGACCGGA+CGG 0.632980 7.1:+43937702 None:intergenic
AGGTTGGTACGTCAATAGCA+AGG 0.634622 7.1:-43936887 MS.gene65057:CDS
AGATACACAAGATAGAATTG+AGG 0.647008 7.1:-43937853 MS.gene65057:CDS
GGTCTACAGATTCTGTCAGA+AGG 0.648359 7.1:-43937696 MS.gene65057:CDS
ATGGCCCACATGAGAAAACA+GGG 0.651728 7.1:+43939441 None:intergenic
GCAAGGCTTCTGTCTCTCGA+CGG 0.653198 7.1:-43936870 MS.gene65057:CDS
GGGTACCCTGGTGCACATTG+CGG 0.660165 7.1:+43937600 None:intergenic
ATTGTGGGAATGTTTAACAA+TGG 0.662238 7.1:+43939422 None:intergenic
TTACCAATAAACCCATAGAA+CGG 0.665450 7.1:+43936791 None:intergenic
ATTCCCACAATCAATCTCAG+AGG 0.696725 7.1:-43939410 MS.gene65057:CDS
TAATTCCGCAATGTGCACCA+GGG 0.731402 7.1:-43937605 MS.gene65057:intron
TGAGGGTGAGGAAAATTACG+AGG 0.746935 7.1:-43937898 MS.gene65057:CDS
TGGCCCACATGAGAAAACAG+GGG 0.786077 7.1:+43939442 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATAAAATTAAAAAATAAAA+AGG + chr7.1:43939371-43939390 None:intergenic 0.0%
!! ATAATTATTATCCATATAAA+AGG + chr7.1:43939010-43939029 None:intergenic 10.0%
!! TAACTTTATCAAATATAAAA+GGG + chr7.1:43938735-43938754 None:intergenic 10.0%
!! TAATTATTATCCATATAAAA+GGG + chr7.1:43939009-43939028 None:intergenic 10.0%
!!! AATTTTGTTAAAAAAAAACT+TGG - chr7.1:43938983-43939002 MS.gene65057:intron 10.0%
!!! ACTTAAATTTTTATAAAACA+TGG + chr7.1:43936393-43936412 None:intergenic 10.0%
!!! ATTTTATTCACAAATATTTT+TGG - chr7.1:43938419-43938438 MS.gene65057:intron 10.0%
!! AAAATTGCTTATAATTAACT+TGG - chr7.1:43938937-43938956 MS.gene65057:intron 15.0%
!! AATAAATATCTTAAAAGCAA+AGG + chr7.1:43937644-43937663 None:intergenic 15.0%
!! CTAACTTTATCAAATATAAA+AGG + chr7.1:43938736-43938755 None:intergenic 15.0%
!!! AATTATAAGCAATTTTACTT+TGG + chr7.1:43938933-43938952 None:intergenic 15.0%
!!! ATTATAAGCAATTTTACTTT+GGG + chr7.1:43938932-43938951 None:intergenic 15.0%
!!! CTTTTATATTTGATAAAGTT+AGG - chr7.1:43938734-43938753 MS.gene65057:intron 15.0%
!!! TTGCTTTTAAGATATTTATT+AGG - chr7.1:43937644-43937663 MS.gene65057:CDS 15.0%
!!! TTTTAAGATATTTATTAGGT+TGG - chr7.1:43937648-43937667 MS.gene65057:CDS 15.0%
!! AAAAATCTCAGAATTAACTT+AGG + chr7.1:43935746-43935765 None:intergenic 20.0%
!! AAAAGAACTCATATTAACAA+GGG - chr7.1:43938771-43938790 MS.gene65057:intron 20.0%
!! ATACTTATACATAAAGACAT+GGG + chr7.1:43938568-43938587 None:intergenic 20.0%
!! CTTATATAGAATAGAAAAAG+AGG - chr7.1:43937251-43937270 MS.gene65057:intron 20.0%
!! TAAAAGAACTCATATTAACA+AGG - chr7.1:43938770-43938789 MS.gene65057:intron 20.0%
!! TATACTTATACATAAAGACA+TGG + chr7.1:43938569-43938588 None:intergenic 20.0%
!! TCACATTATTATTACCATTA+CGG + chr7.1:43939300-43939319 None:intergenic 20.0%
!! TTATATTTGATAAAGTTAGG+TGG - chr7.1:43938737-43938756 MS.gene65057:intron 20.0%
!! TTATCTAATGACATAAACAA+GGG - chr7.1:43938031-43938050 MS.gene65057:intron 20.0%
!! TTTATCTAATGACATAAACA+AGG - chr7.1:43938030-43938049 MS.gene65057:intron 20.0%
!!! AAATTTAAGTTCGAAATTCT+AGG - chr7.1:43936403-43936422 MS.gene65057:intron 20.0%
!!! AACATACCTAAATTCTAAAA+TGG - chr7.1:43935415-43935434 MS.gene65057:intron 20.0%
!!! AATTTTTATAAAACATGGAG+AGG + chr7.1:43936388-43936407 None:intergenic 20.0%
!!! AGTTACATCAATTTTATTTG+TGG - chr7.1:43937045-43937064 MS.gene65057:CDS 20.0%
!!! GTCATATTATTTTCATAACT+AGG + chr7.1:43938258-43938277 None:intergenic 20.0%
!!! TTAATTTTATACAGGGAATT+TGG - chr7.1:43939380-43939399 MS.gene65057:CDS 20.0%
!!! TTATTCACAAATATTTTTGG+TGG - chr7.1:43938422-43938441 MS.gene65057:intron 20.0%
!!! TTGATACCATTTTAGAATTT+AGG + chr7.1:43935424-43935443 None:intergenic 20.0%
!!! TTTAGTTCAGATTTATACAT+TGG - chr7.1:43937987-43938006 MS.gene65057:intron 20.0%
! AAACTATTAATCACTAACCA+AGG + chr7.1:43938711-43938730 None:intergenic 25.0%
! ATAACAAGGAAATTACTAAG+AGG + chr7.1:43936541-43936560 None:intergenic 25.0%
! ATGAGATTAGTACTCATATT+TGG + chr7.1:43936253-43936272 None:intergenic 25.0%
! CATGTAGAAATGTTTATAAG+TGG - chr7.1:43935355-43935374 MS.gene65057:intron 25.0%
! TAACAAGGAAATTACTAAGA+GGG + chr7.1:43936540-43936559 None:intergenic 25.0%
! TATCTAATGACATAAACAAG+GGG - chr7.1:43938032-43938051 MS.gene65057:intron 25.0%
! TTATTCACAAACCACATTAA+AGG + chr7.1:43938799-43938818 None:intergenic 25.0%
! TTCAGTGTAATTATATGTGT+CGG + chr7.1:43935517-43935536 None:intergenic 25.0%
! TTTCAAATTATTAGCAGTGT+CGG - chr7.1:43935547-43935566 MS.gene65057:intron 25.0%
!! AAAAACTACTGATTGTTTCA+GGG - chr7.1:43937842-43937861 MS.gene65057:CDS 25.0%
!! AATTAAATGCTCTAAACATG+AGG - chr7.1:43936635-43936654 MS.gene65057:CDS 25.0%
!! ATTAAATGCTCTAAACATGA+GGG - chr7.1:43936636-43936655 MS.gene65057:CDS 25.0%
!! TCAATTACAAACTTTGACTT+AGG - chr7.1:43936306-43936325 MS.gene65057:intron 25.0%
!!! AAGAGGATAAGTTTACTTTT+TGG - chr7.1:43937268-43937287 MS.gene65057:intron 25.0%
!!! AATTATTTTTCTTCAAGTGC+AGG - chr7.1:43939024-43939043 MS.gene65057:intron 25.0%
!!! AATTCTGAGATTTTTCATGT+CGG - chr7.1:43935751-43935770 MS.gene65057:intron 25.0%
!!! ATTATTTTTCTTCAAGTGCA+GGG - chr7.1:43939025-43939044 MS.gene65057:intron 25.0%
!!! GTCTGTGTTTTATTTTTGTT+TGG - chr7.1:43936439-43936458 MS.gene65057:intron 25.0%
!!! TGAAGAGGCTTTAAATATTT+GGG - chr7.1:43937544-43937563 MS.gene65057:intron 25.0%
AATCCAAAACTTCATTCTGA+AGG + chr7.1:43936513-43936532 None:intergenic 30.0%
AATTTGCAAACAACCTATGA+GGG + chr7.1:43935215-43935234 None:intergenic 30.0%
ACATTGAACATGATATGTGT+AGG - chr7.1:43935671-43935690 MS.gene65057:intron 30.0%
AGATACACAAGATAGAATTG+AGG - chr7.1:43936698-43936717 MS.gene65057:intron 30.0%
ATCCAAAACTTCATTCTGAA+GGG + chr7.1:43936512-43936531 None:intergenic 30.0%
ATCTAATGACATAAACAAGG+GGG - chr7.1:43938033-43938052 MS.gene65057:intron 30.0%
ATGAGTACTAATCTCATCTA+TGG - chr7.1:43936256-43936275 MS.gene65057:intron 30.0%
ATTGAACATGATATGTGTAG+GGG - chr7.1:43935673-43935692 MS.gene65057:intron 30.0%
ATTGTGGGAATGTTTAACAA+TGG + chr7.1:43935132-43935151 None:intergenic 30.0%
CATGCTAATGAATCATTAGT+TGG - chr7.1:43938874-43938893 MS.gene65057:intron 30.0%
CATTGAACATGATATGTGTA+GGG - chr7.1:43935672-43935691 MS.gene65057:intron 30.0%
GAACTTATATAATAAGCGCT+TGG - chr7.1:43938316-43938335 MS.gene65057:intron 30.0%
GGAATCAACTAACAAAGAAA+GGG + chr7.1:43936571-43936590 None:intergenic 30.0%
GTAGAAATGTTTATAAGTGG+AGG - chr7.1:43935358-43935377 MS.gene65057:intron 30.0%
TATAACTCATGCCTATTGTA+AGG + chr7.1:43935394-43935413 None:intergenic 30.0%
TGGAATCAACTAACAAAGAA+AGG + chr7.1:43936572-43936591 None:intergenic 30.0%
TGTAAAAAATCAGCCTATTG+TGG - chr7.1:43937372-43937391 MS.gene65057:intron 30.0%
TTAAGCTGTTTATCCAAACA+TGG - chr7.1:43938343-43938362 MS.gene65057:intron 30.0%
TTACCAATAAACCCATAGAA+CGG + chr7.1:43937763-43937782 None:intergenic 30.0%
TTCTTTCACATATGCAACAT+TGG + chr7.1:43936465-43936484 None:intergenic 30.0%
TTTAAGCATTAGACCATGTT+TGG + chr7.1:43938359-43938378 None:intergenic 30.0%
! AAAAACTTGGCCCTTTTATA+TGG - chr7.1:43938996-43939015 MS.gene65057:intron 30.0%
! AAAACTACTGATTGTTTCAG+GGG - chr7.1:43937843-43937862 MS.gene65057:CDS 30.0%
! AATCTGAACTAAACTGATTC+AGG + chr7.1:43937980-43937999 None:intergenic 30.0%
! ACTCATATTTGGAATTGTTC+TGG + chr7.1:43936242-43936261 None:intergenic 30.0%
! CAAAAACTACTGATTGTTTC+AGG - chr7.1:43937841-43937860 MS.gene65057:CDS 30.0%
! CAAAAGTATGGCAATCTTAT+TGG - chr7.1:43938499-43938518 MS.gene65057:intron 30.0%
! GCTTATAATTAACTTGGTCA+TGG - chr7.1:43938943-43938962 MS.gene65057:intron 30.0%
! GGTTTCACTTTCAAAGTTTT+TGG - chr7.1:43936912-43936931 MS.gene65057:intron 30.0%
! GTGGTTTGTGAATAATACAT+TGG - chr7.1:43938804-43938823 MS.gene65057:intron 30.0%
! TGTCATTTGTTTCAACAGTT+TGG - chr7.1:43936998-43937017 MS.gene65057:intron 30.0%
! TTTTACTGTTATAGCGACAA+AGG - chr7.1:43937344-43937363 MS.gene65057:intron 30.0%
!! AATTCTAGGACATATGTTTG+AGG - chr7.1:43936417-43936436 MS.gene65057:intron 30.0%
!! GTGAAGAGGCTTTAAATATT+TGG - chr7.1:43937543-43937562 MS.gene65057:intron 30.0%
!!! AAAGGTGTTTTCAATTCAAC+GGG + chr7.1:43937626-43937645 None:intergenic 30.0%
!!! CAAAGGTGTTTTCAATTCAA+CGG + chr7.1:43937627-43937646 None:intergenic 30.0%
!!! CTGTTTTGTTGTTAACTCAT+AGG - chr7.1:43937319-43937338 MS.gene65057:intron 30.0%
!!! TATGGCAATCTTATTGGTTT+TGG - chr7.1:43938505-43938524 MS.gene65057:intron 30.0%
AAAAACAAGAAGCAAACACG+AGG + chr7.1:43937603-43937622 None:intergenic 35.0%
AAAAGCTTCCCCAAGTAAAA+GGG + chr7.1:43937891-43937910 None:intergenic 35.0%
AAAGCAATAGAAGAGGAAGA+AGG + chr7.1:43936975-43936994 None:intergenic 35.0%
AAGCAATAGAAGAGGAAGAA+GGG + chr7.1:43936974-43936993 None:intergenic 35.0%
ACAGACGTTGTACAAAAGTA+TGG - chr7.1:43938487-43938506 MS.gene65057:intron 35.0%
ACAGTAGCAAGAGCAAATAT+CGG + chr7.1:43939272-43939291 None:intergenic 35.0%
ACATCATATCAACCGTTCTA+TGG - chr7.1:43937748-43937767 MS.gene65057:CDS 35.0%
AGAATTGAGGTGCAAACAAA+TGG - chr7.1:43936711-43936730 MS.gene65057:intron 35.0%
ATATCTACCACAACATTTGG+AGG + chr7.1:43935805-43935824 None:intergenic 35.0%
ATATGTGATCAGCTTGGAAT+AGG - chr7.1:43939227-43939246 MS.gene65057:intron 35.0%
ATCAACTAACAAAGAAAGGG+AGG + chr7.1:43936568-43936587 None:intergenic 35.0%
ATGCATGGATGAATTACAAG+TGG + chr7.1:43937173-43937192 None:intergenic 35.0%
ATTCTGCTTCTGTAATGCAA+AGG + chr7.1:43936618-43936637 None:intergenic 35.0%
CAAGCTGATCACATATGAAA+AGG + chr7.1:43939223-43939242 None:intergenic 35.0%
CAATTTGCAAACAACCTATG+AGG + chr7.1:43935216-43935235 None:intergenic 35.0%
CATCATATCAACCGTTCTAT+GGG - chr7.1:43937749-43937768 MS.gene65057:CDS 35.0%
CCAAATGTTGTGGTAGATAT+TGG - chr7.1:43935805-43935824 MS.gene65057:intron 35.0%
CCAATATCTACCACAACATT+TGG + chr7.1:43935808-43935827 None:intergenic 35.0%
CTCATAGGTTGTTTGCAAAT+TGG - chr7.1:43935214-43935233 MS.gene65057:intron 35.0%
GACAAAGAAAGCAATAGAAG+AGG + chr7.1:43936982-43937001 None:intergenic 35.0%
GAGCTACTGCTTAATAGTTA+TGG - chr7.1:43937070-43937089 MS.gene65057:intron 35.0%
GAGTAAGCAAGTTTCTAATG+CGG - chr7.1:43939180-43939199 MS.gene65057:intron 35.0%
GTAAATGAATCGTACCTTGA+GGG - chr7.1:43936002-43936021 MS.gene65057:intron 35.0%
GTCACATGACAACAACTTTA+AGG + chr7.1:43938072-43938091 None:intergenic 35.0%
GTGCAAACAAATGGTAAAGA+GGG - chr7.1:43936720-43936739 MS.gene65057:intron 35.0%
GTTGTACATAATACTTCCGT+CGG - chr7.1:43937952-43937971 MS.gene65057:intron 35.0%
TCATTAGATAAACCCCTAGT+TGG + chr7.1:43938022-43938041 None:intergenic 35.0%
TCCATAAGCTCTCTCAAAAA+GGG + chr7.1:43938230-43938249 None:intergenic 35.0%
TCTAATATGAAGCACGGATA+TGG + chr7.1:43935590-43935609 None:intergenic 35.0%
TGTAAATGAATCGTACCTTG+AGG - chr7.1:43936001-43936020 MS.gene65057:intron 35.0%
TTATACATAAAGACATGGGC+AGG + chr7.1:43938564-43938583 None:intergenic 35.0%
TTCCATAAGCTCTCTCAAAA+AGG + chr7.1:43938231-43938250 None:intergenic 35.0%
TTGGGATAGATATACTCATC+TGG + chr7.1:43938914-43938933 None:intergenic 35.0%
! ACATGATACCCTTTTACTTG+GGG - chr7.1:43937880-43937899 MS.gene65057:CDS 35.0%
! AGAACGGTTGATATGATGTA+CGG + chr7.1:43937747-43937766 None:intergenic 35.0%
! ATCTGCTGATGTTACTTCAA+GGG - chr7.1:43937926-43937945 MS.gene65057:intron 35.0%
! CATTTGCTGAATCTTTCTCA+AGG - chr7.1:43937715-43937734 MS.gene65057:CDS 35.0%
! CGTTATTCTTTTATGTCAGG+CGG - chr7.1:43939437-43939456 MS.gene65057:CDS 35.0%
! CTGCGTTATTCTTTTATGTC+AGG - chr7.1:43939434-43939453 MS.gene65057:CDS 35.0%
! CTTTTCATATGTGATCAGCT+TGG - chr7.1:43939221-43939240 MS.gene65057:intron 35.0%
! GACAATTTTTCCATATGCTG+TGG - chr7.1:43939402-43939421 MS.gene65057:CDS 35.0%
! GACATGATACCCTTTTACTT+GGG - chr7.1:43937879-43937898 MS.gene65057:CDS 35.0%
! TATTTGGAATTGTTCTGGAC+CGG + chr7.1:43936237-43936256 None:intergenic 35.0%
! TGACATGATACCCTTTTACT+TGG - chr7.1:43937878-43937897 MS.gene65057:CDS 35.0%
! TGGAATAGGATTCCTTTTGA+GGG - chr7.1:43939241-43939260 MS.gene65057:intron 35.0%
! TGGATTTTTCATCAGTGAAG+AGG - chr7.1:43937529-43937548 MS.gene65057:intron 35.0%
! TTACGAGGCGTTAAAATCTA+AGG - chr7.1:43936668-43936687 MS.gene65057:CDS 35.0%
! TTCCCTTCAGAATGAAGTTT+TGG - chr7.1:43936507-43936526 MS.gene65057:intron 35.0%
! TTGGAATAGGATTCCTTTTG+AGG - chr7.1:43939240-43939259 MS.gene65057:intron 35.0%
! TTGTCATGCTACTTCAACTT+TGG + chr7.1:43937225-43937244 None:intergenic 35.0%
! TTTTTCTCCTCCAAATGTTG+TGG - chr7.1:43935795-43935814 MS.gene65057:intron 35.0%
!! TTATTGATTCCTGATCTGTC+CGG - chr7.1:43935829-43935848 MS.gene65057:intron 35.0%
AGCCTCTTGCGTAAAAAACA+GGG - chr7.1:43938121-43938140 MS.gene65057:intron 40.0%
AGGAGTGAGAACATAGTTGT+GGG - chr7.1:43935709-43935728 MS.gene65057:intron 40.0%
AGTAAGTCCACGTGACTTTA+TGG - chr7.1:43936196-43936215 MS.gene65057:intron 40.0%
ATCAGCCTATTGTGGCATTA+TGG - chr7.1:43937380-43937399 MS.gene65057:intron 40.0%
ATTCCAATCATAGCCAGGAA+CGG + chr7.1:43936765-43936784 None:intergenic 40.0%
ATTCCCACAATCAATCTCAG+AGG - chr7.1:43935141-43935160 MS.gene65057:CDS 40.0%
ATTGGAGATCGAATCCAACT+AGG - chr7.1:43938005-43938024 MS.gene65057:intron 40.0%
CAACCGTTCTATGGGTTTAT+TGG - chr7.1:43937757-43937776 MS.gene65057:CDS 40.0%
CGTACTATACACCAAATGGT+TGG - chr7.1:43938152-43938171 MS.gene65057:intron 40.0%
CTAAACAGTCTAACAGTGAC+AGG + chr7.1:43935180-43935199 None:intergenic 40.0%
CTTCATCATGCTGGATACAA+TGG + chr7.1:43936592-43936611 None:intergenic 40.0%
GAAAAGCTTCCCCAAGTAAA+AGG + chr7.1:43937892-43937911 None:intergenic 40.0%
GCTATGATTGGAATTGCGTT+AGG - chr7.1:43936771-43936790 MS.gene65057:intron 40.0%
GGTGCAAACAAATGGTAAAG+AGG - chr7.1:43936719-43936738 MS.gene65057:intron 40.0%
GTAAGTCCACGTGACTTTAT+GGG - chr7.1:43936197-43936216 MS.gene65057:intron 40.0%
GTCATGTGACTGAAAGGTTT+GGG - chr7.1:43938082-43938101 MS.gene65057:intron 40.0%
GTGCTTCATATTCACCTGAA+TGG + chr7.1:43939107-43939126 None:intergenic 40.0%
GTTGTTGTCATGTGACTGAA+AGG - chr7.1:43938076-43938095 MS.gene65057:intron 40.0%
TAACAAGGGCTCCTTTAATG+TGG - chr7.1:43938785-43938804 MS.gene65057:intron 40.0%
TAGGAGTGAGAACATAGTTG+TGG - chr7.1:43935708-43935727 MS.gene65057:intron 40.0%
TCATGCCTATTGTAAGGTGA+GGG + chr7.1:43935388-43935407 None:intergenic 40.0%
TGAATTACAAGTGGCAGACA+TGG + chr7.1:43937164-43937183 None:intergenic 40.0%
TGCTACCATAATGCCACAAT+AGG + chr7.1:43937388-43937407 None:intergenic 40.0%
TGTCATGTGACTGAAAGGTT+TGG - chr7.1:43938081-43938100 MS.gene65057:intron 40.0%
TTCTGACAGAATCTGTAGAC+CGG + chr7.1:43936856-43936875 None:intergenic 40.0%
TTGGAGATCGAATCCAACTA+GGG - chr7.1:43938006-43938025 MS.gene65057:intron 40.0%
! AAAGGTTTGGGTTCAATTCC+TGG - chr7.1:43938094-43938113 MS.gene65057:intron 40.0%
! CATCTGCTGATGTTACTTCA+AGG - chr7.1:43937925-43937944 MS.gene65057:CDS 40.0%
! GATCTACTTCTGGTTGCTTA+TGG - chr7.1:43937496-43937515 MS.gene65057:intron 40.0%
! TAAACTGATTCAGGTTCCGA+CGG + chr7.1:43937971-43937990 None:intergenic 40.0%
! TAACCCCTGTTTTCTCATGT+GGG - chr7.1:43935106-43935125 MS.gene65057:CDS 40.0%
! TTAACCCCTGTTTTCTCATG+TGG - chr7.1:43935105-43935124 MS.gene65057:CDS 40.0%
!! ACAACCTCTGAGATTGATTG+TGG + chr7.1:43935148-43935167 None:intergenic 40.0%
!! CAACCTCTGAGATTGATTGT+GGG + chr7.1:43935147-43935166 None:intergenic 40.0%
!! CTCATTTCTCTCACTGACTT+GGG + chr7.1:43935961-43935980 None:intergenic 40.0%
!! GTCATGGTGATGATTTTGCA+TGG - chr7.1:43938959-43938978 MS.gene65057:intron 40.0%
!! GTTAGGCATTGGTAAAGAGA+AGG - chr7.1:43938453-43938472 MS.gene65057:intron 40.0%
!! GTTCTTTAGCTTTCCCTCAT+AGG - chr7.1:43935199-43935218 MS.gene65057:intron 40.0%
!! TAGGATTCCTTTTGAGGGAA+CGG - chr7.1:43939246-43939265 MS.gene65057:intron 40.0%
!! TTTTTGCAGGGGTGTGTTTT+GGG - chr7.1:43939065-43939084 MS.gene65057:intron 40.0%
!!! CTCCAGAGTTGTTTTTTGCA+GGG - chr7.1:43939053-43939072 MS.gene65057:intron 40.0%
!!! TCCAGAGTTGTTTTTTGCAG+GGG - chr7.1:43939054-43939073 MS.gene65057:intron 40.0%
!!! TCTCCAGAGTTGTTTTTTGC+AGG - chr7.1:43939052-43939071 MS.gene65057:intron 40.0%
!!! TTTTGGTGGTGTCAACAGTT+AGG - chr7.1:43938436-43938455 MS.gene65057:intron 40.0%
!!! TTTTTTGCAGGGGTGTGTTT+TGG - chr7.1:43939064-43939083 MS.gene65057:intron 40.0%
AAAGTGAAACCAGCAGCAAC+AGG + chr7.1:43936903-43936922 None:intergenic 45.0%
AAATGTGCCTGTGAGTACGT+TGG - chr7.1:43935925-43935944 MS.gene65057:intron 45.0%
AAGCTCTCTCAAAAAGGGCA+GGG + chr7.1:43938225-43938244 None:intergenic 45.0%
AATGGCCCACATGAGAAAAC+AGG + chr7.1:43935114-43935133 None:intergenic 45.0%
ACCCCTGCAAAAAACAACTC+TGG + chr7.1:43939058-43939077 None:intergenic 45.0%
ACGCAATTCCAATCATAGCC+AGG + chr7.1:43936770-43936789 None:intergenic 45.0%
ATAATTCCGCAATGTGCACC+AGG - chr7.1:43936945-43936964 MS.gene65057:intron 45.0%
ATGAAGCACGGATATGGACA+CGG + chr7.1:43935584-43935603 None:intergenic 45.0%
ATGGCCCACATGAGAAAACA+GGG + chr7.1:43935113-43935132 None:intergenic 45.0%
ATTCGCCAACAGCCTATTCT+AGG - chr7.1:43936822-43936841 MS.gene65057:CDS 45.0%
CAAAGGTGACTTCATCATGC+TGG + chr7.1:43936601-43936620 None:intergenic 45.0%
CACACGTTTCGAATCTCTTC+AGG - chr7.1:43935247-43935266 MS.gene65057:intron 45.0%
CAGAAGTAGATCCATCTGCA+GGG + chr7.1:43937488-43937507 None:intergenic 45.0%
CAGCCTCTTGCGTAAAAAAC+AGG - chr7.1:43938120-43938139 MS.gene65057:intron 45.0%
CCAAGTCAGTGAGAGAAATG+AGG - chr7.1:43935959-43935978 MS.gene65057:intron 45.0%
CTCATGCCTATTGTAAGGTG+AGG + chr7.1:43935389-43935408 None:intergenic 45.0%
CTTGCGTAAAAAACAGGGCA+AGG - chr7.1:43938126-43938145 MS.gene65057:intron 45.0%
GAAAGGGAGGCTGAATAACA+AGG + chr7.1:43936555-43936574 None:intergenic 45.0%
GCAGTTGAACGATTCTCTCT+TGG - chr7.1:43938653-43938672 MS.gene65057:intron 45.0%
GCGGAGTCTAATATGAAGCA+CGG + chr7.1:43935596-43935615 None:intergenic 45.0%
GCTGCGTACTATACACCAAA+TGG - chr7.1:43938148-43938167 MS.gene65057:intron 45.0%
GGAGTGAGAACATAGTTGTG+GGG - chr7.1:43935710-43935729 MS.gene65057:intron 45.0%
GGTCTACAGATTCTGTCAGA+AGG - chr7.1:43936855-43936874 MS.gene65057:CDS 45.0%
GTAGGGGTAAGTTTACGTGT+AGG - chr7.1:43935689-43935708 MS.gene65057:intron 45.0%
GTATCTGAATTCCCTGCAGA+TGG - chr7.1:43937474-43937493 MS.gene65057:intron 45.0%
GTGATCCTAGAATAGGCTGT+TGG + chr7.1:43936830-43936849 None:intergenic 45.0%
GTTCTCCCTCACCTTACAAT+AGG - chr7.1:43935380-43935399 MS.gene65057:intron 45.0%
TAAGCTCTCTCAAAAAGGGC+AGG + chr7.1:43938226-43938245 None:intergenic 45.0%
TAATTCCGCAATGTGCACCA+GGG - chr7.1:43936946-43936965 MS.gene65057:intron 45.0%
TAGAATAGGCTGTTGGCGAA+TGG + chr7.1:43936823-43936842 None:intergenic 45.0%
TCCAATCCCATAAAGTCACG+TGG + chr7.1:43936206-43936225 None:intergenic 45.0%
TCCACGTGACTTTATGGGAT+TGG - chr7.1:43936202-43936221 MS.gene65057:intron 45.0%
TGAGGGTGAGGAAAATTACG+AGG - chr7.1:43936653-43936672 MS.gene65057:CDS 45.0%
TGCTACTGTTGCAACCGTAA+TGG - chr7.1:43939283-43939302 MS.gene65057:intron 45.0%
TGGAGATCGAATCCAACTAG+GGG - chr7.1:43938007-43938026 MS.gene65057:intron 45.0%
TTCCAATCATAGCCAGGAAC+GGG + chr7.1:43936764-43936783 None:intergenic 45.0%
! AAAGAAGCACAACGTCCTGA+GGG + chr7.1:43936170-43936189 None:intergenic 45.0%
! AACTGCTAGTTCTCGATGCA+TGG + chr7.1:43937188-43937207 None:intergenic 45.0%
! ATACTCATCTGGCTTCAGCT+TGG + chr7.1:43938903-43938922 None:intergenic 45.0%
! ATGCTCTAAACATGAGGGTG+AGG - chr7.1:43936641-43936660 MS.gene65057:CDS 45.0%
! CCTCATTTCTCTCACTGACT+TGG + chr7.1:43935962-43935981 None:intergenic 45.0%
! GGGAAGCTTTTCAGAAAGTC+TGG - chr7.1:43937900-43937919 MS.gene65057:CDS 45.0%
! TGGTGTCAACAGTTAGGCAT+TGG - chr7.1:43938442-43938461 MS.gene65057:intron 45.0%
! TTTGGGTCTGTGCTTTTCAC+TGG - chr7.1:43937561-43937580 MS.gene65057:intron 45.0%
!! ACAACTTTAAGGTTGCGCCA+AGG + chr7.1:43938061-43938080 None:intergenic 45.0%
!! AGGTTGGTACGTCAATAGCA+AGG - chr7.1:43937664-43937683 MS.gene65057:CDS 45.0%
!! GCCCTTTTTGAGAGAGCTTA+TGG - chr7.1:43938226-43938245 MS.gene65057:intron 45.0%
!! TTTTGCAGGGGTGTGTTTTG+GGG - chr7.1:43939066-43939085 MS.gene65057:intron 45.0%
!!! TGCCCTGTTTTTTACGCAAG+AGG + chr7.1:43938126-43938145 None:intergenic 45.0%
!!! ATTTAATTTTTTTATATACA+AGG - chr7.1:43939158-43939177 MS.gene65057:intron 5.0%
!!! TTATTTTTTAATTTTATACA+GGG - chr7.1:43939373-43939392 MS.gene65057:CDS 5.0%
!!! TTTATTTTTTAATTTTATAC+AGG - chr7.1:43939372-43939391 MS.gene65057:CDS 5.0%
AACAGGAGCAACTGCTGAAG+AGG + chr7.1:43936886-43936905 None:intergenic 50.0%
AACCCTACAGCTTTCCTTGC+AGG - chr7.1:43938683-43938702 MS.gene65057:intron 50.0%
ACATAAACAAGGGGGAGCCT+TGG - chr7.1:43938041-43938060 MS.gene65057:intron 50.0%
ATATCGGCCGTTCCCTCAAA+AGG + chr7.1:43939256-43939275 None:intergenic 50.0%
ATCCCGTTCCTGGCTATGAT+TGG - chr7.1:43936759-43936778 MS.gene65057:intron 50.0%
ATGGGATTGGACGTTCTAGC+CGG - chr7.1:43936215-43936234 MS.gene65057:intron 50.0%
CCAGAAGTAGATCCATCTGC+AGG + chr7.1:43937489-43937508 None:intergenic 50.0%
CCTGCAGATGGATCTACTTC+TGG - chr7.1:43937486-43937505 MS.gene65057:intron 50.0%
CTCCTGCAAGGAAAGCTGTA+GGG + chr7.1:43938688-43938707 None:intergenic 50.0%
GACAGAATCTGTAGACCGGA+CGG + chr7.1:43936852-43936871 None:intergenic 50.0%
GGACGTTGTGCTTCTTTCTG+AGG - chr7.1:43936173-43936192 MS.gene65057:intron 50.0%
GTTGAAGCAGCCACAGCATA+TGG + chr7.1:43939415-43939434 None:intergenic 50.0%
TGATCACTACCGGACAGATC+AGG + chr7.1:43935841-43935860 None:intergenic 50.0%
TGCCTCTGTCTGATCACTAC+CGG + chr7.1:43935851-43935870 None:intergenic 50.0%
TGCTAACGGCTTCTGTGACA+CGG - chr7.1:43936050-43936069 MS.gene65057:CDS 50.0%
TGGCCCACATGAGAAAACAG+GGG + chr7.1:43935112-43935131 None:intergenic 50.0%
TGTCACAGAAGCCGTTAGCA+CGG + chr7.1:43936050-43936069 None:intergenic 50.0%
TTCTGTCTCTCGACGGAACA+TGG - chr7.1:43937688-43937707 MS.gene65057:CDS 50.0%
TTGCTTATGGCTGCAGGTTG+TGG - chr7.1:43937509-43937528 MS.gene65057:intron 50.0%
! AAAGGCTAGTGTTGGGCGTA+GGG - chr7.1:43935624-43935643 MS.gene65057:intron 50.0%
! GAAAGAAGCACAACGTCCTG+AGG + chr7.1:43936171-43936190 None:intergenic 50.0%
! TTACGCAAGAGGCTGTTTCC+AGG + chr7.1:43938115-43938134 None:intergenic 50.0%
! TTCTGGTTGCTTATGGCTGC+AGG - chr7.1:43937503-43937522 MS.gene65057:intron 50.0%
!! CCTATTCTAGGATCACCGTC+CGG - chr7.1:43936834-43936853 MS.gene65057:CDS 50.0%
!! TTTGCAGGGGTGTGTTTTGG+GGG - chr7.1:43939067-43939086 MS.gene65057:intron 50.0%
AACGTTCTCGTGCGGCATTC+CGG - chr7.1:43935870-43935889 MS.gene65057:CDS 55.0%
ACAGAGCTACCGCATACGCA+GGG + chr7.1:43938191-43938210 None:intergenic 55.0%
ACAGAGGCAACGTTCTCGTG+CGG - chr7.1:43935862-43935881 MS.gene65057:CDS 55.0%
ACCGTACATGTGGCCTCCAA+TGG + chr7.1:43936091-43936110 None:intergenic 55.0%
ACGGATATGGACACGGACAC+TGG + chr7.1:43935577-43935596 None:intergenic 55.0%
AGCTTTCCTTGCAGGAGCCT+TGG - chr7.1:43938691-43938710 MS.gene65057:intron 55.0%
CAAATGGTTGGACGCCTTCC+CGG - chr7.1:43938164-43938183 MS.gene65057:intron 55.0%
CAAGACAGAGATCCCGTTCC+TGG - chr7.1:43936749-43936768 MS.gene65057:intron 55.0%
CACTAACCAAGGCTCCTGCA+AGG + chr7.1:43938700-43938719 None:intergenic 55.0%
CCACATGTACGGTGCAGGAA+AGG - chr7.1:43936098-43936117 MS.gene65057:CDS 55.0%
CCGGACGGTGATCCTAGAAT+AGG + chr7.1:43936837-43936856 None:intergenic 55.0%
CCTTTCCTGCACCGTACATG+TGG + chr7.1:43936101-43936120 None:intergenic 55.0%
GCAAGGCTTCTGTCTCTCGA+CGG - chr7.1:43937681-43937700 MS.gene65057:CDS 55.0%
GCCATTGGAGGCCACATGTA+CGG - chr7.1:43936087-43936106 MS.gene65057:CDS 55.0%
GCGCTGCAAAGGCTAGTGTT+GGG - chr7.1:43935617-43935636 MS.gene65057:intron 55.0%
GCTCCTGCAAGGAAAGCTGT+AGG + chr7.1:43938689-43938708 None:intergenic 55.0%
GTACGGTGCAGGAAAGGTGA+GGG - chr7.1:43936104-43936123 MS.gene65057:intron 55.0%
GTCCGGTAGTGATCAGACAG+AGG - chr7.1:43935846-43935865 MS.gene65057:intron 55.0%
TGCGCTGCAAAGGCTAGTGT+TGG - chr7.1:43935616-43935635 MS.gene65057:intron 55.0%
TGTACGGTGCAGGAAAGGTG+AGG - chr7.1:43936103-43936122 MS.gene65057:intron 55.0%
TGTCAGTGTCTGACACGACG+CGG + chr7.1:43935489-43935508 None:intergenic 55.0%
! CAAAGGCTAGTGTTGGGCGT+AGG - chr7.1:43935623-43935642 MS.gene65057:intron 55.0%
! GGGCAGTAGGGGTGTATTGA+AGG - chr7.1:43935644-43935663 MS.gene65057:intron 55.0%
! TATGCGGTAGCTCTGTGCAC+CGG - chr7.1:43938195-43938214 MS.gene65057:intron 55.0%
! TGGAGTGCCAACGTACTCAC+AGG + chr7.1:43935935-43935954 None:intergenic 55.0%
!! GAAGAGGAAGAAGGGTACCC+TGG + chr7.1:43936966-43936985 None:intergenic 55.0%
!! TCTCTCACTGACTTGGGCGT+TGG + chr7.1:43935955-43935974 None:intergenic 55.0%
AAGCCGTTAGCACGGCTCTC+AGG + chr7.1:43936042-43936061 None:intergenic 60.0%
AGCCGTTAGCACGGCTCTCA+GGG + chr7.1:43936041-43936060 None:intergenic 60.0%
CACAGAGCTACCGCATACGC+AGG + chr7.1:43938192-43938211 None:intergenic 60.0%
CACCCTGAGAGCCGTGCTAA+CGG - chr7.1:43936036-43936055 MS.gene65057:intron 60.0%
CCTCATCAGGGAGCCATTGG+AGG - chr7.1:43936075-43936094 MS.gene65057:CDS 60.0%
CCTCCAATGGCTCCCTGATG+AGG + chr7.1:43936078-43936097 None:intergenic 60.0%
CGCGGGACACGTCTAATCTG+AGG + chr7.1:43935471-43935490 None:intergenic 60.0%
GCAGTTGCTCCTGTTGCTGC+TGG - chr7.1:43936891-43936910 MS.gene65057:intron 60.0%
GGGTACCCTGGTGCACATTG+CGG + chr7.1:43936954-43936973 None:intergenic 60.0%
GTCAGTGTCTGACACGACGC+GGG + chr7.1:43935488-43935507 None:intergenic 60.0%
GTGACTCAGCGTCACCCTCA+AGG + chr7.1:43936019-43936038 None:intergenic 60.0%
GTGTTGGGCGTAGGGCAGTA+GGG - chr7.1:43935632-43935651 MS.gene65057:intron 60.0%
TAGACTCCGCTGCGCTGCAA+AGG - chr7.1:43935606-43935625 MS.gene65057:intron 60.0%
TCAAAAAGGGCAGGGCAGCC+CGG + chr7.1:43938217-43938236 None:intergenic 60.0%
TGTGACACGGCGCCTCATCA+GGG - chr7.1:43936063-43936082 MS.gene65057:CDS 60.0%
TGTTGGGCGTAGGGCAGTAG+GGG - chr7.1:43935633-43935652 MS.gene65057:intron 60.0%
! AGTGTTGGGCGTAGGGCAGT+AGG - chr7.1:43935631-43935650 MS.gene65057:intron 60.0%
! ATGCGGTAGCTCTGTGCACC+GGG - chr7.1:43938196-43938215 MS.gene65057:intron 60.0%
! GAAAGGTGAGGGCGTGTTCC+AGG - chr7.1:43936115-43936134 MS.gene65057:intron 60.0%
!! CACTAGCCTTTGCAGCGCAG+CGG + chr7.1:43935615-43935634 None:intergenic 60.0%
!! CGGGAAGGCGTCCAACCATT+TGG + chr7.1:43938166-43938185 None:intergenic 60.0%
!! CGGTGGCGGAGTAGTCTTCA+TGG - chr7.1:43935895-43935914 MS.gene65057:CDS 60.0%
AGACTACTCCGCCACCGTGC+CGG + chr7.1:43935892-43935911 None:intergenic 65.0%
CTACCGCATACGCAGGGTCC+GGG + chr7.1:43938185-43938204 None:intergenic 65.0%
CTGTGACACGGCGCCTCATC+AGG - chr7.1:43936062-43936081 MS.gene65057:CDS 65.0%
CTTCCCGGACCCTGCGTATG+CGG - chr7.1:43938179-43938198 MS.gene65057:intron 65.0%
GCGCCTCATCAGGGAGCCAT+TGG - chr7.1:43936072-43936091 MS.gene65057:CDS 65.0%
GCTACCGCATACGCAGGGTC+CGG + chr7.1:43938186-43938205 None:intergenic 65.0%
GGAGGCCACATGTACGGTGC+AGG - chr7.1:43936093-43936112 MS.gene65057:CDS 65.0%
TCCAGGACGGTGATCCACCC+CGG - chr7.1:43936132-43936151 MS.gene65057:intron 65.0%
TCTCGTGCGGCATTCCGGCA+CGG - chr7.1:43935875-43935894 MS.gene65057:CDS 65.0%
! AACGTCCTGAGGGAGCACGC+TGG + chr7.1:43936160-43936179 None:intergenic 65.0%
! GGTGAGGGCGTGTTCCAGGA+CGG - chr7.1:43936119-43936138 MS.gene65057:intron 65.0%
!! CTGAGGGAGCACGCTGGTTC+CGG + chr7.1:43936154-43936173 None:intergenic 65.0%
!! TGAGGGAGCACGCTGGTTCC+GGG + chr7.1:43936153-43936172 None:intergenic 65.0%
CGCATACGCAGGGTCCGGGA+AGG + chr7.1:43938181-43938200 None:intergenic 70.0%
CGGAACCAGCGTGCTCCCTC+AGG - chr7.1:43936152-43936171 MS.gene65057:intron 70.0%
TCCGGGGTGGATCACCGTCC+TGG + chr7.1:43936136-43936155 None:intergenic 70.0%
!! GAGGGAGCACGCTGGTTCCG+GGG + chr7.1:43936152-43936171 None:intergenic 70.0%
CGTGCGGCATTCCGGCACGG+TGG - chr7.1:43935878-43935897 MS.gene65057:CDS 75.0%
GCGGCATTCCGGCACGGTGG+CGG - chr7.1:43935881-43935900 MS.gene65057:CDS 75.0%
!! GGAGCACGCTGGTTCCGGGG+TGG + chr7.1:43936149-43936168 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr7.1 gene 43935099 43939474 43935099 ID=MS.gene65057
chr7.1 mRNA 43935099 43939474 43935099 ID=MS.gene65057.t1;Parent=MS.gene65057
chr7.1 exon 43939305 43939474 43939305 ID=MS.gene65057.t1.exon1;Parent=MS.gene65057.t1
chr7.1 CDS 43939305 43939474 43939305 ID=cds.MS.gene65057.t1;Parent=MS.gene65057.t1
chr7.1 exon 43937606 43937944 43937606 ID=MS.gene65057.t1.exon2;Parent=MS.gene65057.t1
chr7.1 CDS 43937606 43937944 43937606 ID=cds.MS.gene65057.t1;Parent=MS.gene65057.t1
chr7.1 exon 43937008 43937080 43937008 ID=MS.gene65057.t1.exon3;Parent=MS.gene65057.t1
chr7.1 CDS 43937008 43937080 43937008 ID=cds.MS.gene65057.t1;Parent=MS.gene65057.t1
chr7.1 exon 43936795 43936907 43936795 ID=MS.gene65057.t1.exon4;Parent=MS.gene65057.t1
chr7.1 CDS 43936795 43936907 43936795 ID=cds.MS.gene65057.t1;Parent=MS.gene65057.t1
chr7.1 exon 43936626 43936710 43936626 ID=MS.gene65057.t1.exon5;Parent=MS.gene65057.t1
chr7.1 CDS 43936626 43936710 43936626 ID=cds.MS.gene65057.t1;Parent=MS.gene65057.t1
chr7.1 exon 43936047 43936119 43936047 ID=MS.gene65057.t1.exon6;Parent=MS.gene65057.t1
chr7.1 CDS 43936047 43936119 43936047 ID=cds.MS.gene65057.t1;Parent=MS.gene65057.t1
chr7.1 exon 43935861 43935916 43935861 ID=MS.gene65057.t1.exon7;Parent=MS.gene65057.t1
chr7.1 CDS 43935861 43935916 43935861 ID=cds.MS.gene65057.t1;Parent=MS.gene65057.t1
chr7.1 exon 43935462 43935527 43935462 ID=MS.gene65057.t1.exon8;Parent=MS.gene65057.t1
chr7.1 CDS 43935462 43935527 43935462 ID=cds.MS.gene65057.t1;Parent=MS.gene65057.t1
chr7.1 exon 43935269 43935334 43935269 ID=MS.gene65057.t1.exon9;Parent=MS.gene65057.t1
chr7.1 CDS 43935269 43935334 43935269 ID=cds.MS.gene65057.t1;Parent=MS.gene65057.t1
chr7.1 exon 43935099 43935179 43935099 ID=MS.gene65057.t1.exon10;Parent=MS.gene65057.t1
chr7.1 CDS 43935099 43935179 43935099 ID=cds.MS.gene65057.t1;Parent=MS.gene65057.t1
Gene Sequence

>MS.gene65057

ATGTCTTTAACCCCTGTTTTCTCATGTGGGCCATTGTTAAACATTCCCACAATCAATCTCAGAGGTTGTAGAACAAAACCTGTCACTGTTAGACTGTTTAGTTCTTTAGCTTTCCCTCATAGGTTGTTTGCAAATTGGAATACAAATGCACACGTTTCGAATCTCTTCAGGTAACTAACTAACTTCTCATTTATATGTTGATGCATATGATTGTTTTCTAGATACATAATGTGATTTTTGTTATTGTAGAGTTGCACATGTAGAAATGTTTATAAGTGGAGGTTCTCCCTCACCTTACAATAGGCATGAGTTATATAACATACCTAAATTCTAAAATGGTATCAAAGTTATATATGAAGCACAGACAATCCTCAGATTAGACGTGTCCCGCGTCGTGTCAGACACTGACACGACACCGACACATATAATTACACTGAATTATGTGATTTTTCAAATTATTAGCAGTGTCGGTGTGCCAGTGTCCGTGTCCATATCCGTGCTTCATATTAGACTCCGCTGCGCTGCAAAGGCTAGTGTTGGGCGTAGGGCAGTAGGGGTGTATTGAAGGTCTCACATTGAACATGATATGTGTAGGGGTAAGTTTACGTGTAGGAGTGAGAACATAGTTGTGGGGTTGAATTAGACCTAAGTTAATTCTGAGATTTTTCATGTCGGTTAGAACATAGTTATTACAGTTTTTTCTCCTCCAAATGTTGTGGTAGATATTGGCTTATTGATTCCTGATCTGTCCGGTAGTGATCAGACAGAGGCAACGTTCTCGTGCGGCATTCCGGCACGGTGGCGGAGTAGTCTTCATGGCGAAGCGAAATGTGCCTGTGAGTACGTTGGCACTCCAACGCCCAAGTCAGTGAGAGAAATGAGGTTGAATATGTCTAAGTGTGTGTAAATGAATCGTACCTTGAGGGTGACGCTGAGTCACCCTGAGAGCCGTGCTAACGGCTTCTGTGACACGGCGCCTCATCAGGGAGCCATTGGAGGCCACATGTACGGTGCAGGAAAGGTGAGGGCGTGTTCCAGGACGGTGATCCACCCCGGAACCAGCGTGCTCCCTCAGGACGTTGTGCTTCTTTCTGAGGAGTAAGTCCACGTGACTTTATGGGATTGGACGTTCTAGCCGGTCCAGAACAATTCCAAATATGAGTACTAATCTCATCTATGGTTACACATTTCAGAGATGTTATTCATATCAATTACAAACTTTGACTTAGGATGTTTGAGATATATATGAGTTTTAAGTTTTGTATTAGCTCATTGAAATTTGTTTTCCTCTCCATGTTTTATAAAAATTTAAGTTCGAAATTCTAGGACATATGTTTGAGGTCTGTGTTTTATTTTTGTTTGGCCAATGTTGCATATGTGAAAGAAGTGAGTTTGTTTATATGACATATTCCCTTCAGAATGAAGTTTTGGATTTTGTCCCTCTTAGTAATTTCCTTGTTATTCAGCCTCCCTTTCTTTGTTAGTTGATTCCATTGTATCCAGCATGATGAAGTCACCTTTGCATTACAGAAGCAGAATTAAATGCTCTAAACATGAGGGTGAGGAAAATTACGAGGCGTTAAAATCTAAGGATATATTAGATACACAAGATAGAATTGAGGTGCAAACAAATGGTAAAGAGGGACATAACAAGACAGAGATCCCGTTCCTGGCTATGATTGGAATTGCGTTAGGCATAGCTGCATTAGCTACAATAGCATCCATTCGCCAACAGCCTATTCTAGGATCACCGTCCGGTCTACAGATTCTGTCAGAAGGTTCTTCCTCTTCAGCAGTTGCTCCTGTTGCTGCTGGTTTCACTTTCAAAGTTTTTGGATTCAGCGTTATAATTCCGCAATGTGCACCAGGGTACCCTTCTTCCTCTTCTATTGCTTTCTTTGTCATTTGTTTCAACAGTTTGGCAGCTACACTTAAGTTGTTCTTAAAGTTACATCAATTTTATTTGTGGTTGAGCTACTGCTTAATAGTTATGGAAAATCTCTTCATTATATTTCTGCATATTTTTGTGTTCTTGTAGATTAAGATTTTGCGTTGTTGTTTACCATGTCTGCCACTTGTAATTCATCCATGCATCGAGAACTAGCAGTTAGAGACTAAACACGCCAAAGTTGAAGTAGCATGACAACTATTTCTTATATAGAATAGAAAAAGAGGATAAGTTTACTTTTTGGCAATAATAAGAACTCTCTTTCTACAAGACTGTTTTGTTGTTAACTCATAGGCATTTTACTGTTATAGCGACAAAGGATGCATGTAAAAAATCAGCCTATTGTGGCATTATGGTAGCATTCATAGTTCATCATATTGCAGTTAAGAGTATTTAAACTTTCTTGTAAGTTAACACGTTCTATCATGTATCTGAATTCCCTGCAGATGGATCTACTTCTGGTTGCTTATGGCTGCAGGTTGTGGATTTTTCATCAGTGAAGAGGCTTTAAATATTTGGGTCTGTGCTTTTCACTGGTACTTCTGTTTTACATCCTCGTGTTTGCTTCTTGTTTTTCCCGTTGAATTGAAAACACCTTTGCTTTTAAGATATTTATTAGGTTGGTACGTCAATAGCAAGGCTTCTGTCTCTCGACGGAACATGGCAGTCATTTGCTGAATCTTTCTCAAGGAATGCTCCGTACATCATATCAACCGTTCTATGGGTTTATTGGTAATTAGCAGCTCAATCAAACATTTGTTTACATCTTTTATACACATTGTTTTACATTCAAACAAAAACTACTGATTGTTTCAGGGGAGTTTGCATTAGTGACATGATACCCTTTTACTTGGGGAAGCTTTTCAGAAAGTCTGGTGCATCTGCTGATGTTACTTCAAGGGTAAGTTGTACATAATACTTCCGTCGGAACCTGAATCAGTTTAGTTCAGATTTATACATTGGAGATCGAATCCAACTAGGGGTTTATCTAATGACATAAACAAGGGGGAGCCTTGGCGCAACCTTAAAGTTGTTGTCATGTGACTGAAAGGTTTGGGTTCAATTCCTGGAAACAGCCTCTTGCGTAAAAAACAGGGCAAGGCTGCGTACTATACACCAAATGGTTGGACGCCTTCCCGGACCCTGCGTATGCGGTAGCTCTGTGCACCGGGCTGCCCTGCCCTTTTTGAGAGAGCTTATGGAAATAGCCTAGTTATGAAAATAATATGACTTATTTTATCTTTTGTTATAGAAACAGCTTAAACATGAGAACTTATATAATAAGCGCTTGGTTAATTAAGCTGTTTATCCAAACATGGTCTAATGCTTAAACTTCTGTGATTTTCTTTTAATTAATTGTTTTGATGTTTTCATTTTATTCACAAATATTTTTGGTGGTGTCAACAGTTAGGCATTGGTAAAGAGAAGGCTACAGAAATCACAGACGTTGTACAAAAGTATGGCAATCTTATTGGTTTTGGTAAGCTCATAGCGCTTTTTATTTGTGTGTTAAACCTGCCCATGTCTTTATGTATAAGTATACAGTCTTGTGTGTGAAATTGTACTTAAATATTTTGTTATTTATGATGTTCTTGTGACTGAATTTGCAGTTGAACGATTCTCTCTTGGAGTGAGAAACCCTACAGCTTTCCTTGCAGGAGCCTTGGTTAGTGATTAATAGTTTTCCCTTTTATATTTGATAAAGTTAGGTGGAAAGAAAAAGTAAAAGAACTCATATTAACAAGGGCTCCTTTAATGTGGTTTGTGAATAATACATTGGAAAATAGAATATAGATACAACATTAAGTTTATTTTCACAAAAAGATTCATGCTAATGAATCATTAGTTGGACACCAAGCTGAAGCCAGATGAGTATATCTATCCCAAAGTAAAATTGCTTATAATTAACTTGGTCATGGTGATGATTTTGCATGGTAATTTTGTTAAAAAAAAACTTGGCCCTTTTATATGGATAATAATTATTTTTCTTCAAGTGCAGGGTATTTCTCCAGAGTTGTTTTTTGCAGGGGTGTGTTTTGGGGGTCTGTTCACACTTTCCATTCAGGTGAATATGAAGCACAAATCATTACAAGAACAGAATTTTAATCTTAATTTAATTTTTTTATATACAAGGAGTAAGCAAGTTTCTAATGCGGTGACTAACATAACTTTTCCTTTTCATATGTGATCAGCTTGGAATAGGATTCCTTTTGAGGGAACGGCCGATATTTGCTCTTGCTACTGTTGCAACCGTAATGGTAATAATAATGTGAATTTGAACAATAAAATTCTTGTTTAGTCAAAGATGTAACTAAACATTACCTTTTTATTTTTTAATTTTATACAGGGAATTTGGACAATTTTTCCATATGCTGTGGCTGCTTCAACTGCGTTATTCTTTTATGTCAGGCGGAAGTACTTATCTTAG

Protein sequence

>MS.gene65057.t1

MSLTPVFSCGPLLNIPTINLRGCRTKPVTVRLFSSLAFPHRLFANWNTNAHVSNLFRSRIKCSKHEGEENYEALKSKDILDTQDRIEVQTNGKEGHNKTEIPFLAMIGIALGIAALATIASIRQQPILGSPSGLQILSEGSSSSAVAPVAAGFTFKVFGFSVIIPQCAPGWIYFWLLMAAGCGFFISEEALNIWVGTSIARLLSLDGTWQSFAESFSRNAPYIISTVLWVYWGVCISDMIPFYLGKLFRKSGASADVTSRLGIGKEKATEITDVVQKYGNLIGFVERFSLGVRNPTAFLAGALGISPELFFAGVCFGGLFTLSIQLGIGFLLRERPIFALATVATVMGIWTIFPYAVAASTALFFYVRRKYLS