Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69935.t1 | XP_013468987.1 | 98.9 | 379 | 4 | 0 | 1 | 379 | 1 | 379 | 2.90E-222 | 780.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69935.t1 | Q93VR3 | 91.0 | 377 | 34 | 0 | 1 | 377 | 1 | 377 | 1.7e-207 | 723.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69935.t1 | A0A072VNM9 | 98.9 | 379 | 4 | 0 | 1 | 379 | 37 | 415 | 2.1e-222 | 780.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene69935 | 0.805854 | 1.09E-49 | -1.69E-46 |
| MS.gene049151 | MS.gene69935 | 0.822905 | 1.84E-53 | -1.69E-46 |
| MS.gene049153 | MS.gene69935 | 0.80586 | 1.09E-49 | -1.69E-46 |
| MS.gene049297 | MS.gene69935 | 0.853864 | 1.80E-61 | -1.69E-46 |
| MS.gene049378 | MS.gene69935 | 0.825732 | 3.99E-54 | -1.69E-46 |
| MS.gene049382 | MS.gene69935 | 0.802128 | 6.50E-49 | -1.69E-46 |
| MS.gene049599 | MS.gene69935 | -0.833405 | 5.44E-56 | -1.69E-46 |
| MS.gene049758 | MS.gene69935 | 0.88192 | 1.61E-70 | -1.69E-46 |
| MS.gene04984 | MS.gene69935 | 0.808472 | 3.05E-50 | -1.69E-46 |
| MS.gene049910 | MS.gene69935 | 0.858466 | 8.08E-63 | -1.69E-46 |
| MS.gene049915 | MS.gene69935 | 0.831953 | 1.25E-55 | -1.69E-46 |
| MS.gene050226 | MS.gene69935 | 0.85725 | 1.85E-62 | -1.69E-46 |
| MS.gene050227 | MS.gene69935 | 0.865267 | 6.69E-65 | -1.69E-46 |
| MS.gene050228 | MS.gene69935 | 0.854385 | 1.28E-61 | -1.69E-46 |
| MS.gene050301 | MS.gene69935 | 0.845412 | 4.13E-59 | -1.69E-46 |
| MS.gene050319 | MS.gene69935 | -0.813689 | 2.25E-51 | -1.69E-46 |
| MS.gene050330 | MS.gene69935 | -0.840069 | 1.09E-57 | -1.69E-46 |
| MS.gene050558 | MS.gene69935 | 0.851167 | 1.06E-60 | -1.69E-46 |
| MS.gene050586 | MS.gene69935 | 0.805532 | 1.28E-49 | -1.69E-46 |
| MS.gene050623 | MS.gene69935 | -0.822985 | 1.77E-53 | -1.69E-46 |
| MS.gene050629 | MS.gene69935 | -0.809408 | 1.92E-50 | -1.69E-46 |
| MS.gene050642 | MS.gene69935 | 0.835308 | 1.81E-56 | -1.69E-46 |
| MS.gene050762 | MS.gene69935 | 0.835774 | 1.38E-56 | -1.69E-46 |
| MS.gene050763 | MS.gene69935 | 0.838064 | 3.59E-57 | -1.69E-46 |
| MS.gene050787 | MS.gene69935 | 0.827521 | 1.49E-54 | -1.69E-46 |
| MS.gene050807 | MS.gene69935 | 0.813837 | 2.09E-51 | -1.69E-46 |
| MS.gene050820 | MS.gene69935 | 0.830568 | 2.73E-55 | -1.69E-46 |
| MS.gene05119 | MS.gene69935 | -0.843685 | 1.20E-58 | -1.69E-46 |
| MS.gene051257 | MS.gene69935 | 0.81158 | 6.52E-51 | -1.69E-46 |
| MS.gene051535 | MS.gene69935 | 0.806506 | 7.96E-50 | -1.69E-46 |
| MS.gene051662 | MS.gene69935 | 0.833708 | 4.57E-56 | -1.69E-46 |
| MS.gene051663 | MS.gene69935 | 0.851152 | 1.07E-60 | -1.69E-46 |
| MS.gene051860 | MS.gene69935 | 0.862496 | 4.86E-64 | -1.69E-46 |
| MS.gene051983 | MS.gene69935 | 0.812236 | 4.69E-51 | -1.69E-46 |
| MS.gene052077 | MS.gene69935 | 0.814373 | 1.59E-51 | -1.69E-46 |
| MS.gene052176 | MS.gene69935 | 0.815479 | 9.05E-52 | -1.69E-46 |
| MS.gene052178 | MS.gene69935 | 0.801913 | 7.19E-49 | -1.69E-46 |
| MS.gene052255 | MS.gene69935 | 0.800516 | 1.39E-48 | -1.69E-46 |
| MS.gene052256 | MS.gene69935 | 0.814992 | 1.16E-51 | -1.69E-46 |
| MS.gene052302 | MS.gene69935 | 0.821474 | 3.96E-53 | -1.69E-46 |
| MS.gene052309 | MS.gene69935 | -0.804937 | 1.70E-49 | -1.69E-46 |
| MS.gene052376 | MS.gene69935 | 0.832639 | 8.43E-56 | -1.69E-46 |
| MS.gene052389 | MS.gene69935 | 0.801759 | 7.74E-49 | -1.69E-46 |
| MS.gene052600 | MS.gene69935 | 0.800788 | 1.22E-48 | -1.69E-46 |
| MS.gene052856 | MS.gene69935 | 0.825712 | 4.04E-54 | -1.69E-46 |
| MS.gene052858 | MS.gene69935 | 0.830875 | 2.29E-55 | -1.69E-46 |
| MS.gene052860 | MS.gene69935 | 0.829397 | 5.27E-55 | -1.69E-46 |
| MS.gene053559 | MS.gene69935 | 0.802335 | 5.89E-49 | -1.69E-46 |
| MS.gene053836 | MS.gene69935 | 0.898341 | 5.84E-77 | -1.69E-46 |
| MS.gene054184 | MS.gene69935 | 0.80576 | 1.14E-49 | -1.69E-46 |
| MS.gene054185 | MS.gene69935 | 0.813271 | 2.78E-51 | -1.69E-46 |
| MS.gene054379 | MS.gene69935 | 0.861889 | 7.47E-64 | -1.69E-46 |
| MS.gene054473 | MS.gene69935 | 0.88394 | 2.93E-71 | -1.69E-46 |
| MS.gene054542 | MS.gene69935 | 0.835147 | 1.99E-56 | -1.69E-46 |
| MS.gene054667 | MS.gene69935 | 0.841444 | 4.74E-58 | -1.69E-46 |
| MS.gene054930 | MS.gene69935 | 0.865646 | 5.08E-65 | -1.69E-46 |
| MS.gene054942 | MS.gene69935 | 0.848063 | 7.78E-60 | -1.69E-46 |
| MS.gene054983 | MS.gene69935 | 0.855196 | 7.42E-62 | -1.69E-46 |
| MS.gene055277 | MS.gene69935 | 0.811315 | 7.45E-51 | -1.69E-46 |
| MS.gene055422 | MS.gene69935 | 0.840376 | 9.02E-58 | -1.69E-46 |
| MS.gene055428 | MS.gene69935 | 0.866419 | 2.89E-65 | -1.69E-46 |
| MS.gene055816 | MS.gene69935 | -0.801496 | 8.76E-49 | -1.69E-46 |
| MS.gene056069 | MS.gene69935 | -0.829223 | 5.81E-55 | -1.69E-46 |
| MS.gene056875 | MS.gene69935 | 0.869283 | 3.48E-66 | -1.69E-46 |
| MS.gene056979 | MS.gene69935 | 0.803712 | 3.06E-49 | -1.69E-46 |
| MS.gene05702 | MS.gene69935 | 0.802002 | 6.90E-49 | -1.69E-46 |
| MS.gene057121 | MS.gene69935 | 0.834126 | 3.59E-56 | -1.69E-46 |
| MS.gene057245 | MS.gene69935 | 0.831341 | 1.76E-55 | -1.69E-46 |
| MS.gene057260 | MS.gene69935 | 0.836671 | 8.16E-57 | -1.69E-46 |
| MS.gene057469 | MS.gene69935 | 0.816234 | 6.14E-52 | -1.69E-46 |
| MS.gene057639 | MS.gene69935 | 0.809832 | 1.56E-50 | -1.69E-46 |
| MS.gene057665 | MS.gene69935 | 0.811082 | 8.36E-51 | -1.69E-46 |
| MS.gene057750 | MS.gene69935 | 0.833051 | 6.66E-56 | -1.69E-46 |
| MS.gene057754 | MS.gene69935 | 0.806796 | 6.91E-50 | -1.69E-46 |
| MS.gene058002 | MS.gene69935 | 0.86239 | 5.24E-64 | -1.69E-46 |
| MS.gene05811 | MS.gene69935 | 0.840967 | 6.32E-58 | -1.69E-46 |
| MS.gene058139 | MS.gene69935 | 0.803589 | 3.24E-49 | -1.69E-46 |
| MS.gene058142 | MS.gene69935 | 0.802255 | 6.12E-49 | -1.69E-46 |
| MS.gene058168 | MS.gene69935 | 0.800068 | 1.71E-48 | -1.69E-46 |
| MS.gene058182 | MS.gene69935 | 0.827409 | 1.59E-54 | -1.69E-46 |
| MS.gene058710 | MS.gene69935 | 0.803644 | 3.16E-49 | -1.69E-46 |
| MS.gene058749 | MS.gene69935 | 0.816165 | 6.37E-52 | -1.69E-46 |
| MS.gene058833 | MS.gene69935 | 0.836967 | 6.86E-57 | -1.69E-46 |
| MS.gene058845 | MS.gene69935 | 0.816279 | 6.00E-52 | -1.69E-46 |
| MS.gene058851 | MS.gene69935 | 0.816754 | 4.70E-52 | -1.69E-46 |
| MS.gene059033 | MS.gene69935 | -0.805564 | 1.26E-49 | -1.69E-46 |
| MS.gene05907 | MS.gene69935 | 0.829963 | 3.83E-55 | -1.69E-46 |
| MS.gene059124 | MS.gene69935 | 0.820906 | 5.35E-53 | -1.69E-46 |
| MS.gene059128 | MS.gene69935 | 0.821891 | 3.17E-53 | -1.69E-46 |
| MS.gene059285 | MS.gene69935 | 0.825532 | 4.45E-54 | -1.69E-46 |
| MS.gene059518 | MS.gene69935 | 0.837254 | 5.79E-57 | -1.69E-46 |
| MS.gene059597 | MS.gene69935 | 0.839291 | 1.73E-57 | -1.69E-46 |
| MS.gene05984 | MS.gene69935 | 0.868015 | 8.93E-66 | -1.69E-46 |
| MS.gene059894 | MS.gene69935 | 0.823814 | 1.13E-53 | -1.69E-46 |
| MS.gene059899 | MS.gene69935 | 0.829437 | 5.15E-55 | -1.69E-46 |
| MS.gene060084 | MS.gene69935 | 0.809175 | 2.15E-50 | -1.69E-46 |
| MS.gene060137 | MS.gene69935 | -0.816767 | 4.67E-52 | -1.69E-46 |
| MS.gene060404 | MS.gene69935 | 0.828907 | 6.92E-55 | -1.69E-46 |
| MS.gene060476 | MS.gene69935 | 0.83501 | 2.15E-56 | -1.69E-46 |
| MS.gene060480 | MS.gene69935 | 0.811731 | 6.04E-51 | -1.69E-46 |
| MS.gene060683 | MS.gene69935 | 0.801536 | 8.60E-49 | -1.69E-46 |
| MS.gene061049 | MS.gene69935 | 0.835457 | 1.66E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene68222 | MS.gene69935 | PPI |
| MS.gene014281 | MS.gene69935 | PPI |
| MS.gene064894 | MS.gene69935 | PPI |
| MS.gene063165 | MS.gene69935 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69935.t1 | MTR_1g080950 | 98.945 | 379 | 4 | 0 | 1 | 379 | 1 | 379 | 0.0 | 787 |
| MS.gene69935.t1 | MTR_1g080950 | 98.945 | 379 | 4 | 0 | 1 | 379 | 37 | 415 | 0.0 | 786 |
| MS.gene69935.t1 | MTR_7g115080 | 91.005 | 378 | 32 | 2 | 1 | 377 | 35 | 411 | 0.0 | 728 |
| MS.gene69935.t1 | MTR_7g115080 | 91.005 | 378 | 32 | 2 | 1 | 377 | 1 | 377 | 0.0 | 727 |
| MS.gene69935.t1 | MTR_7g115080 | 91.005 | 378 | 32 | 2 | 1 | 377 | 14 | 390 | 0.0 | 726 |
| MS.gene69935.t1 | MTR_4g120030 | 28.165 | 316 | 208 | 8 | 29 | 340 | 112 | 412 | 2.63e-28 | 115 |
| MS.gene69935.t1 | MTR_1g088480 | 27.160 | 324 | 217 | 8 | 28 | 347 | 118 | 426 | 3.34e-26 | 109 |
| MS.gene69935.t1 | MTR_4g063600 | 27.832 | 309 | 208 | 9 | 28 | 331 | 32 | 330 | 4.23e-25 | 104 |
| MS.gene69935.t1 | MTR_2g096660 | 28.662 | 314 | 199 | 11 | 28 | 331 | 38 | 336 | 6.09e-25 | 104 |
| MS.gene69935.t1 | MTR_4g063600 | 27.832 | 309 | 205 | 10 | 28 | 331 | 32 | 327 | 7.28e-24 | 101 |
| MS.gene69935.t1 | MTR_7g108490 | 24.768 | 323 | 216 | 8 | 29 | 342 | 15 | 319 | 2.72e-21 | 93.6 |
| MS.gene69935.t1 | MTR_7g108490 | 24.768 | 323 | 216 | 8 | 29 | 342 | 16 | 320 | 3.17e-21 | 93.6 |
| MS.gene69935.t1 | MTR_1g067530 | 25.074 | 339 | 210 | 9 | 26 | 329 | 110 | 439 | 8.99e-21 | 94.0 |
| MS.gene69935.t1 | MTR_4g102270 | 24.340 | 341 | 213 | 11 | 30 | 338 | 95 | 422 | 6.11e-15 | 76.3 |
| MS.gene69935.t1 | MTR_4g024600 | 24.189 | 339 | 214 | 12 | 28 | 335 | 101 | 427 | 8.60e-15 | 75.9 |
| MS.gene69935.t1 | MTR_5g011940 | 24.412 | 340 | 212 | 12 | 28 | 335 | 90 | 416 | 3.23e-14 | 73.9 |
| MS.gene69935.t1 | MTR_1g009600 | 25.688 | 327 | 217 | 14 | 26 | 337 | 3 | 318 | 5.87e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69935.t1 | AT5G28840 | 90.981 | 377 | 34 | 0 | 1 | 377 | 1 | 377 | 0.0 | 729 |
| MS.gene69935.t1 | AT5G28840 | 90.981 | 377 | 34 | 0 | 1 | 377 | 1 | 377 | 0.0 | 729 |
| MS.gene69935.t1 | AT3G62830 | 27.160 | 324 | 222 | 8 | 28 | 347 | 119 | 432 | 2.48e-28 | 115 |
| MS.gene69935.t1 | AT3G62830 | 27.160 | 324 | 222 | 8 | 28 | 347 | 119 | 432 | 2.48e-28 | 115 |
| MS.gene69935.t1 | AT2G47650 | 28.247 | 308 | 207 | 8 | 28 | 331 | 121 | 418 | 4.30e-28 | 114 |
| MS.gene69935.t1 | AT3G53520 | 27.744 | 328 | 222 | 9 | 26 | 348 | 118 | 435 | 4.30e-28 | 114 |
| MS.gene69935.t1 | AT2G47650 | 27.707 | 314 | 207 | 9 | 28 | 331 | 121 | 424 | 2.17e-26 | 110 |
| MS.gene69935.t1 | AT3G53520 | 27.134 | 328 | 222 | 10 | 26 | 348 | 118 | 433 | 3.91e-25 | 106 |
| MS.gene69935.t1 | AT2G28760 | 28.013 | 307 | 206 | 9 | 28 | 329 | 31 | 327 | 7.20e-25 | 104 |
| MS.gene69935.t1 | AT2G28760 | 28.013 | 307 | 206 | 9 | 28 | 329 | 31 | 327 | 7.20e-25 | 104 |
| MS.gene69935.t1 | AT2G28760 | 28.013 | 307 | 206 | 9 | 28 | 329 | 31 | 327 | 7.20e-25 | 104 |
| MS.gene69935.t1 | AT3G46440 | 27.653 | 311 | 202 | 10 | 28 | 329 | 29 | 325 | 8.36e-25 | 103 |
| MS.gene69935.t1 | AT3G46440 | 27.653 | 311 | 202 | 10 | 28 | 329 | 29 | 325 | 8.36e-25 | 103 |
| MS.gene69935.t1 | AT2G28760 | 28.013 | 307 | 206 | 9 | 28 | 329 | 62 | 358 | 2.08e-24 | 103 |
| MS.gene69935.t1 | AT5G59290 | 27.010 | 311 | 204 | 10 | 28 | 329 | 1 | 297 | 4.77e-24 | 101 |
| MS.gene69935.t1 | AT5G59290 | 27.010 | 311 | 204 | 10 | 28 | 329 | 30 | 326 | 7.18e-24 | 101 |
| MS.gene69935.t1 | AT1G73250 | 25.714 | 315 | 209 | 7 | 29 | 335 | 18 | 315 | 7.37e-24 | 100 |
| MS.gene69935.t1 | AT5G59290 | 27.010 | 311 | 204 | 10 | 28 | 329 | 45 | 341 | 9.35e-24 | 101 |
| MS.gene69935.t1 | AT5G59290 | 27.010 | 311 | 204 | 10 | 28 | 329 | 23 | 319 | 1.49e-23 | 100 |
| MS.gene69935.t1 | AT3G53520 | 25.779 | 353 | 220 | 11 | 26 | 348 | 118 | 458 | 2.25e-23 | 101 |
| MS.gene69935.t1 | AT1G17890 | 25.231 | 325 | 216 | 8 | 29 | 344 | 21 | 327 | 2.96e-23 | 99.4 |
| MS.gene69935.t1 | AT1G17890 | 25.231 | 325 | 216 | 8 | 29 | 344 | 13 | 319 | 3.14e-23 | 99.4 |
| MS.gene69935.t1 | AT1G17890 | 25.231 | 325 | 216 | 8 | 29 | 344 | 13 | 319 | 3.14e-23 | 99.4 |
| MS.gene69935.t1 | AT2G45310 | 26.100 | 341 | 205 | 14 | 28 | 335 | 97 | 423 | 8.71e-18 | 84.7 |
| MS.gene69935.t1 | AT3G23820 | 24.793 | 363 | 220 | 14 | 28 | 351 | 112 | 460 | 3.59e-16 | 80.1 |
| MS.gene69935.t1 | AT4G00110 | 24.706 | 340 | 211 | 13 | 28 | 335 | 91 | 417 | 4.04e-15 | 77.0 |
| MS.gene69935.t1 | AT1G02000 | 23.824 | 340 | 214 | 12 | 28 | 335 | 92 | 418 | 6.08e-14 | 73.2 |
| MS.gene69935.t1 | AT4G30440 | 23.754 | 341 | 213 | 12 | 28 | 335 | 88 | 414 | 1.15e-12 | 69.3 |
| MS.gene69935.t1 | AT1G53500 | 24.771 | 327 | 220 | 13 | 30 | 341 | 11 | 326 | 1.44e-12 | 69.7 |
Find 102 sgRNAs with CRISPR-Local
Find 163 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTGAAGCTGCTAGGATTAA+TGG | 0.256067 | 1.4:+65851797 | MS.gene69935:CDS |
| CATAACATATATGGTCCTTT+TGG | 0.258635 | 1.4:+65852242 | MS.gene69935:CDS |
| CTGCCCGAAGTGAGCCTAAT+TGG | 0.271744 | 1.4:-65853456 | None:intergenic |
| TTCCGCGAGCCGGTAAATAT+TGG | 0.274622 | 1.4:+65852932 | MS.gene69935:CDS |
| GTTTCTAACTGTTTAAATTC+AGG | 0.285374 | 1.4:-65851982 | None:intergenic |
| ATCTTGAGAGAGAGCCTTAC+TGG | 0.304697 | 1.4:+65851465 | MS.gene69935:CDS |
| TTTCAATCTTGCCGCTGATA+TGG | 0.324249 | 1.4:+65851703 | MS.gene69935:CDS |
| GAGATGGCTGAGATCGTTCT+TGG | 0.352457 | 1.4:+65852980 | MS.gene69935:CDS |
| TATACCTTCAACTTCATTGT+TGG | 0.357453 | 1.4:-65853106 | None:intergenic |
| GCCTAATTGGACCGGTGCTT+GGG | 0.360185 | 1.4:-65853443 | None:intergenic |
| AATTCCATCTTGTTGATCTC+AGG | 0.363929 | 1.4:+65851636 | MS.gene69935:CDS |
| AAAATTTCCATCACTGGTGC+TGG | 0.368034 | 1.4:+65851503 | MS.gene69935:CDS |
| ATTTACCGGCTCGCGGAAAT+CGG | 0.371961 | 1.4:-65852927 | None:intergenic |
| CAAAAGGACCATATATGTTA+TGG | 0.374113 | 1.4:-65852241 | None:intergenic |
| AAGCACTACAACAAAGATTT+CGG | 0.376422 | 1.4:+65852194 | MS.gene69935:CDS |
| TCATCACTTCCAATATTTAC+CGG | 0.378878 | 1.4:-65852941 | None:intergenic |
| AGCCTAATTGGACCGGTGCT+TGG | 0.382304 | 1.4:-65853444 | None:intergenic |
| TTCAATCTTGCCGCTGATAT+GGG | 0.385962 | 1.4:+65851704 | MS.gene69935:CDS |
| GATTACATATGTCTGGATTA+AGG | 0.386996 | 1.4:+65853351 | MS.gene69935:CDS |
| GGGAGGTTCCATAACATATA+TGG | 0.396979 | 1.4:+65852233 | MS.gene69935:CDS |
| ACTGCTTAACGGTTACTAAA+GGG | 0.409840 | 1.4:+65851669 | MS.gene69935:CDS |
| AACTACTAATGTCAGCTTGA+AGG | 0.417690 | 1.4:+65852002 | MS.gene69935:CDS |
| TTTCTAACTGTTTAAATTCA+GGG | 0.425655 | 1.4:-65851981 | None:intergenic |
| GGCTGAGGATTACATATGTC+TGG | 0.425884 | 1.4:+65853344 | MS.gene69935:CDS |
| GGGCCAGGAATGTGATGTAT+AGG | 0.440229 | 1.4:-65853022 | None:intergenic |
| AAGCTTAAAATTTCCATCAC+TGG | 0.443314 | 1.4:+65851497 | MS.gene69935:CDS |
| ATACATAATAACAGAATGAT+TGG | 0.454190 | 1.4:-65851747 | None:intergenic |
| TTCGGAATTGAGTGCCGCAT+TGG | 0.455787 | 1.4:+65852212 | MS.gene69935:CDS |
| TTCATTGATGAGTGTGTTGA+AGG | 0.460492 | 1.4:+65852497 | MS.gene69935:CDS |
| TTACGACCACGAACACCCTC+TGG | 0.466075 | 1.4:-65853043 | None:intergenic |
| CCACGAACACCCTCTGGGCC+AGG | 0.469580 | 1.4:-65853037 | None:intergenic |
| GGTCCAATTAGGCTCACTTC+GGG | 0.470769 | 1.4:+65853453 | MS.gene69935:CDS |
| TCGGAATTGAGTGCCGCATT+GGG | 0.470875 | 1.4:+65852213 | MS.gene69935:CDS |
| CTCTCTCTCAAGATTCTCAT+AGG | 0.472504 | 1.4:-65851456 | None:intergenic |
| TTCTGCAGGATGGGAAGTAC+TGG | 0.475790 | 1.4:+65851410 | None:intergenic |
| ACTCCTATACATCACATTCC+TGG | 0.476449 | 1.4:+65853019 | MS.gene69935:CDS |
| ACCCAAGCACCGGTCCAATT+AGG | 0.477394 | 1.4:+65853442 | MS.gene69935:CDS |
| AAATTTCCATCACTGGTGCT+GGG | 0.477839 | 1.4:+65851504 | MS.gene69935:CDS |
| AACTGCTTAACGGTTACTAA+AGG | 0.478063 | 1.4:+65851668 | MS.gene69935:CDS |
| CTAGGATTAATGGAATTAAG+AGG | 0.478585 | 1.4:+65851807 | MS.gene69935:CDS |
| GCCGCTGATATGGGTGGAAT+GGG | 0.482360 | 1.4:+65851713 | MS.gene69935:CDS |
| CCTGGCCCAGAGGGTGTTCG+TGG | 0.486762 | 1.4:+65853037 | MS.gene69935:CDS |
| AAATTTGAGATGTGGGGAGA+TGG | 0.493691 | 1.4:+65852452 | MS.gene69935:CDS |
| TGCCGCTGATATGGGTGGAA+TGG | 0.494921 | 1.4:+65851712 | MS.gene69935:CDS |
| GGTCATGGATAACTGCTTAA+CGG | 0.498357 | 1.4:+65851658 | MS.gene69935:CDS |
| TAAATCCGATTTCCGCGAGC+CGG | 0.501210 | 1.4:+65852922 | MS.gene69935:CDS |
| TACAGACAAATTTGAGATGT+GGG | 0.508195 | 1.4:+65852445 | MS.gene69935:CDS |
| GGCTCCAACAATGAAGTTGA+AGG | 0.508928 | 1.4:+65853102 | MS.gene69935:CDS |
| ATTACATTATTGCTTCTGAC+TGG | 0.512162 | 1.4:+65851573 | MS.gene69935:CDS |
| GATTAAGGAACAACTTGAAA+GGG | 0.521122 | 1.4:+65853366 | MS.gene69935:CDS |
| CGGTCCAATTAGGCTCACTT+CGG | 0.527001 | 1.4:+65853452 | MS.gene69935:CDS |
| GCTCAAGGTCTTGATACATC+AGG | 0.527626 | 1.4:+65853394 | MS.gene69935:CDS |
| ATACCTTTCCATGTTCCAAA+AGG | 0.529802 | 1.4:-65852257 | None:intergenic |
| AATCGCGAACAAACCTCAGC+AGG | 0.536092 | 1.4:-65852039 | None:intergenic |
| TAATAAAAGAGAAACTTGGC+TGG | 0.537272 | 1.4:+65853080 | MS.gene69935:CDS |
| AGTGTGTTGAAGGTGTGCTT+AGG | 0.538130 | 1.4:+65852507 | MS.gene69935:CDS |
| TGCTTTGTCATACAGGTGGA+AGG | 0.539745 | 1.4:+65852381 | MS.gene69935:intron |
| CAGCGGCAAGATTGAAAACA+TGG | 0.540286 | 1.4:-65851697 | None:intergenic |
| AATTTCCATCACTGGTGCTG+GGG | 0.543928 | 1.4:+65851505 | MS.gene69935:CDS |
| TCTTGTTGATCTCAGGGTCA+TGG | 0.544557 | 1.4:+65851643 | MS.gene69935:CDS |
| ATTCCATCTTGTTGATCTCA+GGG | 0.549458 | 1.4:+65851637 | MS.gene69935:CDS |
| CTGCTTAACGGTTACTAAAG+GGG | 0.550109 | 1.4:+65851670 | MS.gene69935:CDS |
| TTCAACACACTCATCAATGA+AGG | 0.550166 | 1.4:-65852495 | None:intergenic |
| GTTTAGCCACAAGATGCGTA+TGG | 0.550376 | 1.4:+65852140 | MS.gene69935:intron |
| CTTAGCGCGGCGTCTCAAGA+AGG | 0.553238 | 1.4:+65851544 | MS.gene69935:CDS |
| GGCTCACTTCGGGCAGCAGA+CGG | 0.553347 | 1.4:+65853463 | MS.gene69935:CDS |
| TCAATATGATTGAAGCTGCT+AGG | 0.554345 | 1.4:+65851789 | MS.gene69935:CDS |
| CGAAGTGAGCCTAATTGGAC+CGG | 0.556358 | 1.4:-65853451 | None:intergenic |
| TGGTATTGTAGGATGGGCTG+AGG | 0.562487 | 1.4:+65853329 | MS.gene69935:intron |
| TCATACAGGTGGAAGGGAGA+AGG | 0.564053 | 1.4:+65852388 | MS.gene69935:intron |
| GGATTAAGGAACAACTTGAA+AGG | 0.565415 | 1.4:+65853365 | MS.gene69935:CDS |
| GTCTGATGCATGGCCTGCTG+AGG | 0.565899 | 1.4:+65852026 | MS.gene69935:CDS |
| ATTTCCATCACTGGTGCTGG+GGG | 0.574182 | 1.4:+65851506 | MS.gene69935:CDS |
| GGTCTTGATACATCAGGATA+CGG | 0.574577 | 1.4:+65853400 | MS.gene69935:CDS |
| CTTGAAAGGGAGAAGGCTCA+AGG | 0.580968 | 1.4:+65853379 | MS.gene69935:CDS |
| GCTAGAGAAGCTTGCAACAG+AGG | 0.582464 | 1.4:+65852163 | MS.gene69935:CDS |
| GAATTGAGTGCCGCATTGGG+AGG | 0.584070 | 1.4:+65852216 | MS.gene69935:CDS |
| ACACTAATAAAAGAGAAACT+TGG | 0.584612 | 1.4:+65853076 | MS.gene69935:CDS |
| AGGATACGGCTCATCAAAAG+TGG | 0.590362 | 1.4:+65853414 | MS.gene69935:CDS |
| TTATCGCGTCGCACTTAGCG+CGG | 0.590377 | 1.4:+65851531 | MS.gene69935:CDS |
| AATCTTGCCGCTGATATGGG+TGG | 0.591075 | 1.4:+65851707 | MS.gene69935:CDS |
| AGCGCGGCGTCTCAAGAAGG+AGG | 0.592364 | 1.4:+65851547 | MS.gene69935:CDS |
| CATCACATTCCTGGCCCAGA+GGG | 0.594287 | 1.4:+65853028 | MS.gene69935:CDS |
| TTCCAATATTTACCGGCTCG+CGG | 0.595261 | 1.4:-65852934 | None:intergenic |
| TGACCCTGAGATCAACAAGA+TGG | 0.595396 | 1.4:-65851640 | None:intergenic |
| TTTAGCCACAAGATGCGTAT+GGG | 0.596572 | 1.4:+65852141 | MS.gene69935:intron |
| CTACAGACAAATTTGAGATG+TGG | 0.598727 | 1.4:+65852444 | MS.gene69935:CDS |
| AATAAAAGAGAAACTTGGCT+GGG | 0.602593 | 1.4:+65853081 | MS.gene69935:CDS |
| GCTTTGTCATACAGGTGGAA+GGG | 0.602719 | 1.4:+65852382 | MS.gene69935:intron |
| TACGACCACGAACACCCTCT+GGG | 0.602751 | 1.4:-65853042 | None:intergenic |
| AGTGGTGCAAACCCAAGCAC+CGG | 0.611968 | 1.4:+65853432 | MS.gene69935:CDS |
| AAATATTGGAAGTGATGAGA+TGG | 0.614662 | 1.4:+65852946 | MS.gene69935:CDS |
| TCTAGCCCATACGCATCTTG+TGG | 0.616959 | 1.4:-65852146 | None:intergenic |
| GGAACAACTTGAAAGGGAGA+AGG | 0.619660 | 1.4:+65853372 | MS.gene69935:CDS |
| GCTTGAAGGAGTCTGATGCA+TGG | 0.646402 | 1.4:+65852016 | MS.gene69935:CDS |
| ACCCATTCCACCCATATCAG+CGG | 0.650854 | 1.4:-65851714 | None:intergenic |
| GCGCGGCGTCTCAAGAAGGA+GGG | 0.659404 | 1.4:+65851548 | MS.gene69935:CDS |
| ACAGACAAATTTGAGATGTG+GGG | 0.667327 | 1.4:+65852446 | MS.gene69935:CDS |
| ACATCACATTCCTGGCCCAG+AGG | 0.671457 | 1.4:+65853027 | MS.gene69935:CDS |
| AGGGTAGATACAAGCACTTG+AGG | 0.678133 | 1.4:-65851962 | None:intergenic |
| GATGGTCAGCATGAATGAGA+TGG | 0.684833 | 1.4:+65852964 | MS.gene69935:CDS |
| TGTTATGGAACCTCCCAATG+CGG | 0.724863 | 1.4:-65852226 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATAAGTTTTTATCCAATT+TGG | + | chr1.4:65853158-65853177 | MS.gene69935:intron | 15.0% |
| !!! | TTAGTAGATGTTTTTAATTT+TGG | + | chr1.4:65852332-65852351 | MS.gene69935:intron | 15.0% |
| !!! | TTTATTTTTACATTAAGCTT+GGG | + | chr1.4:65852091-65852110 | MS.gene69935:intron | 15.0% |
| !! | ATACATAATAACAGAATGAT+TGG | - | chr1.4:65851750-65851769 | None:intergenic | 20.0% |
| !! | ATTCATTAAAGTCAAACAAT+AGG | - | chr1.4:65853267-65853286 | None:intergenic | 20.0% |
| !! | CAAAATCACTAATATTTGTT+CGG | - | chr1.4:65851868-65851887 | None:intergenic | 20.0% |
| !! | GACTTTAATGAATATTCAAA+GGG | + | chr1.4:65853274-65853293 | MS.gene69935:intron | 20.0% |
| !! | TGACTTTAATGAATATTCAA+AGG | + | chr1.4:65853273-65853292 | MS.gene69935:intron | 20.0% |
| !! | TTTCTAACTGTTTAAATTCA+GGG | - | chr1.4:65851984-65852003 | None:intergenic | 20.0% |
| !!! | ATAATTTTAGTATCCGTAAT+TGG | + | chr1.4:65852789-65852808 | MS.gene69935:intron | 20.0% |
| !!! | CTTTATTTTTACATTAAGCT+TGG | + | chr1.4:65852090-65852109 | MS.gene69935:intron | 20.0% |
| !!! | GAATTATAATTTTGAGCTTA+TGG | + | chr1.4:65852604-65852623 | MS.gene69935:intron | 20.0% |
| !!! | TATCTGATACATTATGTTTT+TGG | + | chr1.4:65851834-65851853 | MS.gene69935:intron | 20.0% |
| ! | AAAAAACACATGAATAAAGC+TGG | - | chr1.4:65852565-65852584 | None:intergenic | 25.0% |
| ! | ACACTAATAAAAGAGAAACT+TGG | + | chr1.4:65853076-65853095 | MS.gene69935:CDS | 25.0% |
| ! | ACATGAAAAGTTTGGTTAAA+TGG | - | chr1.4:65852654-65852673 | None:intergenic | 25.0% |
| ! | ACTAATATTTGTTCGGTTAT+AGG | - | chr1.4:65851861-65851880 | None:intergenic | 25.0% |
| ! | GTTTCTAACTGTTTAAATTC+AGG | - | chr1.4:65851985-65852004 | None:intergenic | 25.0% |
| ! | TATCTAAATTCTGGTATTGT+AGG | + | chr1.4:65853318-65853337 | MS.gene69935:intron | 25.0% |
| ! | TTAAAGTCAAACAATAGGAA+AGG | - | chr1.4:65853262-65853281 | None:intergenic | 25.0% |
| ! | TTATTAAGACACAAGAAAGA+AGG | - | chr1.4:65853144-65853163 | None:intergenic | 25.0% |
| !! | AAACAAACATTTTTCGCAAT+TGG | - | chr1.4:65851926-65851945 | None:intergenic | 25.0% |
| !! | GAAATTTTAAGCTTTTCTGA+TGG | - | chr1.4:65851491-65851510 | None:intergenic | 25.0% |
| !!! | CATCTACTAATTTGCTTATT+CGG | - | chr1.4:65852322-65852341 | None:intergenic | 25.0% |
| !!! | GAAAGTGTAATGGAATTTTT+AGG | + | chr1.4:65853199-65853218 | MS.gene69935:intron | 25.0% |
| AAATATTGGAAGTGATGAGA+TGG | + | chr1.4:65852946-65852965 | MS.gene69935:CDS | 30.0% | |
| AAATGCATCAAACAACCAAA+AGG | - | chr1.4:65852065-65852084 | None:intergenic | 30.0% | |
| AAATTCTGGTATTGTAGGAT+GGG | + | chr1.4:65853323-65853342 | MS.gene69935:intron | 30.0% | |
| AAGCAACAAACTCATTACAT+CGG | - | chr1.4:65852366-65852385 | None:intergenic | 30.0% | |
| AAGCACTACAACAAAGATTT+CGG | + | chr1.4:65852194-65852213 | MS.gene69935:CDS | 30.0% | |
| AAGCTTAAAATTTCCATCAC+TGG | + | chr1.4:65851497-65851516 | MS.gene69935:CDS | 30.0% | |
| AATAAAAGAGAAACTTGGCT+GGG | + | chr1.4:65853081-65853100 | MS.gene69935:CDS | 30.0% | |
| ATTACATTATTGCTTCTGAC+TGG | + | chr1.4:65851573-65851592 | MS.gene69935:CDS | 30.0% | |
| ATTGCATAAATGACATTGAG+AGG | + | chr1.4:65852751-65852770 | MS.gene69935:intron | 30.0% | |
| CAAAAGGACCATATATGTTA+TGG | - | chr1.4:65852244-65852263 | None:intergenic | 30.0% | |
| CTAGGATTAATGGAATTAAG+AGG | + | chr1.4:65851807-65851826 | MS.gene69935:CDS | 30.0% | |
| GATTAAGGAACAACTTGAAA+GGG | + | chr1.4:65853366-65853385 | MS.gene69935:CDS | 30.0% | |
| GATTACATATGTCTGGATTA+AGG | + | chr1.4:65853351-65853370 | MS.gene69935:CDS | 30.0% | |
| TAAATTCTGGTATTGTAGGA+TGG | + | chr1.4:65853322-65853341 | MS.gene69935:intron | 30.0% | |
| TAATAAAAGAGAAACTTGGC+TGG | + | chr1.4:65853080-65853099 | MS.gene69935:CDS | 30.0% | |
| TATACCTTCAACTTCATTGT+TGG | - | chr1.4:65853109-65853128 | None:intergenic | 30.0% | |
| TCATCACTTCCAATATTTAC+CGG | - | chr1.4:65852944-65852963 | None:intergenic | 30.0% | |
| TTACAGCAGTATCTAAATTC+TGG | + | chr1.4:65853309-65853328 | MS.gene69935:intron | 30.0% | |
| TTTAGTATCCGTAATTGGTT+GGG | + | chr1.4:65852794-65852813 | MS.gene69935:intron | 30.0% | |
| ! | AGTACTGGAAAAACTAACTA+TGG | + | chr1.4:65851425-65851444 | MS.gene69935:CDS | 30.0% |
| ! | CATAACATATATGGTCCTTT+TGG | + | chr1.4:65852242-65852261 | MS.gene69935:CDS | 30.0% |
| ! | TACAGACAAATTTGAGATGT+GGG | + | chr1.4:65852445-65852464 | MS.gene69935:CDS | 30.0% |
| ! | TCTTCTTTCAGAAAGTGTAA+TGG | + | chr1.4:65853189-65853208 | MS.gene69935:intron | 30.0% |
| ! | TTTGGTTGTTTGATGCATTT+TGG | + | chr1.4:65852065-65852084 | MS.gene69935:intron | 30.0% |
| ! | TTTTAGTATCCGTAATTGGT+TGG | + | chr1.4:65852793-65852812 | MS.gene69935:intron | 30.0% |
| !! | GCGAAAAATGTTTGTTTTTC+AGG | + | chr1.4:65851929-65851948 | MS.gene69935:intron | 30.0% |
| AACAACAGACCAAATTGTCA+GGG | - | chr1.4:65852888-65852907 | None:intergenic | 35.0% | |
| AACTACTAATGTCAGCTTGA+AGG | + | chr1.4:65852002-65852021 | MS.gene69935:CDS | 35.0% | |
| AACTGCTTAACGGTTACTAA+AGG | + | chr1.4:65851668-65851687 | MS.gene69935:CDS | 35.0% | |
| AATTCCATCTTGTTGATCTC+AGG | + | chr1.4:65851636-65851655 | MS.gene69935:CDS | 35.0% | |
| ACTGCTTAACGGTTACTAAA+GGG | + | chr1.4:65851669-65851688 | MS.gene69935:CDS | 35.0% | |
| ATACCTTTCCATGTTCCAAA+AGG | - | chr1.4:65852260-65852279 | None:intergenic | 35.0% | |
| ATTCCATCTTGTTGATCTCA+GGG | + | chr1.4:65851637-65851656 | MS.gene69935:CDS | 35.0% | |
| ATTGAAGCTGCTAGGATTAA+TGG | + | chr1.4:65851797-65851816 | MS.gene69935:CDS | 35.0% | |
| CAGCTCAAACATGAAAAGTT+TGG | - | chr1.4:65852662-65852681 | None:intergenic | 35.0% | |
| GGATTAAGGAACAACTTGAA+AGG | + | chr1.4:65853365-65853384 | MS.gene69935:CDS | 35.0% | |
| TAACAACAGACCAAATTGTC+AGG | - | chr1.4:65852889-65852908 | None:intergenic | 35.0% | |
| TAAGACACAAGAAAGAAGGA+AGG | - | chr1.4:65853140-65853159 | None:intergenic | 35.0% | |
| TATGATAAGCCCTGACAATT+TGG | + | chr1.4:65852876-65852895 | MS.gene69935:intron | 35.0% | |
| TCAATATGATTGAAGCTGCT+AGG | + | chr1.4:65851789-65851808 | MS.gene69935:CDS | 35.0% | |
| TCATGTTTGAGCTGTTCTAA+GGG | + | chr1.4:65852668-65852687 | MS.gene69935:intron | 35.0% | |
| TTCAACACACTCATCAATGA+AGG | - | chr1.4:65852498-65852517 | None:intergenic | 35.0% | |
| TTCATGTTTGAGCTGTTCTA+AGG | + | chr1.4:65852667-65852686 | MS.gene69935:intron | 35.0% | |
| TTCATTGATGAGTGTGTTGA+AGG | + | chr1.4:65852497-65852516 | MS.gene69935:CDS | 35.0% | |
| TTGGGATAGGGAAAATGATA+CGG | + | chr1.4:65852812-65852831 | MS.gene69935:intron | 35.0% | |
| ! | ACAGACAAATTTGAGATGTG+GGG | + | chr1.4:65852446-65852465 | MS.gene69935:CDS | 35.0% |
| ! | CACTTTCTGAAAGAAGATGA+AGG | - | chr1.4:65853186-65853205 | None:intergenic | 35.0% |
| ! | CTACAGACAAATTTGAGATG+TGG | + | chr1.4:65852444-65852463 | MS.gene69935:CDS | 35.0% |
| !! | AGTTTGTTGCTTTGTCATAC+AGG | + | chr1.4:65852374-65852393 | MS.gene69935:intron | 35.0% |
| !!! | TATATGGTCCTTTTGGAACA+TGG | + | chr1.4:65852249-65852268 | MS.gene69935:CDS | 35.0% |
| AAAATTTCCATCACTGGTGC+TGG | + | chr1.4:65851503-65851522 | MS.gene69935:CDS | 40.0% | |
| AAATTTCCATCACTGGTGCT+GGG | + | chr1.4:65851504-65851523 | MS.gene69935:CDS | 40.0% | |
| ACTCCTATACATCACATTCC+TGG | + | chr1.4:65853019-65853038 | MS.gene69935:CDS | 40.0% | |
| AGAAGATGAAGGAGCCAAAT+TGG | - | chr1.4:65853175-65853194 | None:intergenic | 40.0% | |
| ATCCGTAATTGGTTGGGATA+GGG | + | chr1.4:65852800-65852819 | MS.gene69935:intron | 40.0% | |
| CTCTCTCTCAAGATTCTCAT+AGG | - | chr1.4:65851459-65851478 | None:intergenic | 40.0% | |
| CTGCTTAACGGTTACTAAAG+GGG | + | chr1.4:65851670-65851689 | MS.gene69935:CDS | 40.0% | |
| GAAAAATGAGCACATGACTG+AGG | + | chr1.4:65851598-65851617 | MS.gene69935:CDS | 40.0% | |
| GGGAGGTTCCATAACATATA+TGG | + | chr1.4:65852233-65852252 | MS.gene69935:CDS | 40.0% | |
| GGTCATGGATAACTGCTTAA+CGG | + | chr1.4:65851658-65851677 | MS.gene69935:CDS | 40.0% | |
| GGTCTTGATACATCAGGATA+CGG | + | chr1.4:65853400-65853419 | MS.gene69935:CDS | 40.0% | |
| TATCCGTAATTGGTTGGGAT+AGG | + | chr1.4:65852799-65852818 | MS.gene69935:intron | 40.0% | |
| TCTTGGCTGATTGTTTGGTT+TGG | + | chr1.4:65852534-65852553 | MS.gene69935:intron | 40.0% | |
| TTCAATCTTGCCGCTGATAT+GGG | + | chr1.4:65851704-65851723 | MS.gene69935:CDS | 40.0% | |
| TTCCCTATCCCAACCAATTA+CGG | - | chr1.4:65852805-65852824 | None:intergenic | 40.0% | |
| TTTAGCCACAAGATGCGTAT+GGG | + | chr1.4:65852141-65852160 | MS.gene69935:intron | 40.0% | |
| TTTCAATCTTGCCGCTGATA+TGG | + | chr1.4:65851703-65851722 | MS.gene69935:CDS | 40.0% | |
| ! | AAATTTGAGATGTGGGGAGA+TGG | + | chr1.4:65852452-65852471 | MS.gene69935:CDS | 40.0% |
| ! | TGTTGATTGAGTGAGCTAAC+TGG | - | chr1.4:65852729-65852748 | None:intergenic | 40.0% |
| !! | TTGTTGCTTTGTCATACAGG+TGG | + | chr1.4:65852377-65852396 | MS.gene69935:intron | 40.0% |
| !!! | TGAGATCGTTCTTGGTTTTG+AGG | + | chr1.4:65852988-65853007 | MS.gene69935:CDS | 40.0% |
| AGGATACGGCTCATCAAAAG+TGG | + | chr1.4:65853414-65853433 | MS.gene69935:CDS | 45.0% | |
| AGGGTAGATACAAGCACTTG+AGG | - | chr1.4:65851965-65851984 | None:intergenic | 45.0% | |
| ATCTTGAGAGAGAGCCTTAC+TGG | + | chr1.4:65851465-65851484 | MS.gene69935:CDS | 45.0% | |
| CAGCGGCAAGATTGAAAACA+TGG | - | chr1.4:65851700-65851719 | None:intergenic | 45.0% | |
| GATGGTCAGCATGAATGAGA+TGG | + | chr1.4:65852964-65852983 | MS.gene69935:CDS | 45.0% | |
| GCTCAAGGTCTTGATACATC+AGG | + | chr1.4:65853394-65853413 | MS.gene69935:CDS | 45.0% | |
| GCTTTGTCATACAGGTGGAA+GGG | + | chr1.4:65852382-65852401 | MS.gene69935:intron | 45.0% | |
| GGAACAACTTGAAAGGGAGA+AGG | + | chr1.4:65853372-65853391 | MS.gene69935:CDS | 45.0% | |
| GGCTCCAACAATGAAGTTGA+AGG | + | chr1.4:65853102-65853121 | MS.gene69935:CDS | 45.0% | |
| GGCTGAGGATTACATATGTC+TGG | + | chr1.4:65853344-65853363 | MS.gene69935:CDS | 45.0% | |
| GTAGGTCTTGGCTGATTGTT+TGG | + | chr1.4:65852529-65852548 | MS.gene69935:intron | 45.0% | |
| GTTTAGCCACAAGATGCGTA+TGG | + | chr1.4:65852140-65852159 | MS.gene69935:intron | 45.0% | |
| TCTTGTTGATCTCAGGGTCA+TGG | + | chr1.4:65851643-65851662 | MS.gene69935:CDS | 45.0% | |
| TGACCCTGAGATCAACAAGA+TGG | - | chr1.4:65851643-65851662 | None:intergenic | 45.0% | |
| TGCTTTGTCATACAGGTGGA+AGG | + | chr1.4:65852381-65852400 | MS.gene69935:intron | 45.0% | |
| TGTTATGGAACCTCCCAATG+CGG | - | chr1.4:65852229-65852248 | None:intergenic | 45.0% | |
| ! | AATTTCCATCACTGGTGCTG+GGG | + | chr1.4:65851505-65851524 | MS.gene69935:CDS | 45.0% |
| ! | AGCTTTTCTGATGGCCAGTA+AGG | - | chr1.4:65851482-65851501 | None:intergenic | 45.0% |
| ! | AGTGTGTTGAAGGTGTGCTT+AGG | + | chr1.4:65852507-65852526 | MS.gene69935:CDS | 45.0% |
| ! | TGTTGAAGGTGTGCTTAGGT+AGG | + | chr1.4:65852511-65852530 | MS.gene69935:intron | 45.0% |
| !! | GGTTTGTTCGCGATTCCTTT+TGG | + | chr1.4:65852047-65852066 | MS.gene69935:intron | 45.0% |
| !! | TTCCAATATTTACCGGCTCG+CGG | - | chr1.4:65852937-65852956 | None:intergenic | 45.0% |
| !!! | GGTCCTTTTGGAACATGGAA+AGG | + | chr1.4:65852254-65852273 | MS.gene69935:CDS | 45.0% |
| AATCGCGAACAAACCTCAGC+AGG | - | chr1.4:65852042-65852061 | None:intergenic | 50.0% | |
| AATCTTGCCGCTGATATGGG+TGG | + | chr1.4:65851707-65851726 | MS.gene69935:CDS | 50.0% | |
| ACCCATTCCACCCATATCAG+CGG | - | chr1.4:65851717-65851736 | None:intergenic | 50.0% | |
| AGGTGTGCTTAGGTAGGTCT+TGG | + | chr1.4:65852517-65852536 | MS.gene69935:intron | 50.0% | |
| CGAAGTGAGCCTAATTGGAC+CGG | - | chr1.4:65853454-65853473 | None:intergenic | 50.0% | |
| CGGTCCAATTAGGCTCACTT+CGG | + | chr1.4:65853452-65853471 | MS.gene69935:CDS | 50.0% | |
| CTTGAAAGGGAGAAGGCTCA+AGG | + | chr1.4:65853379-65853398 | MS.gene69935:CDS | 50.0% | |
| GAGATGGCTGAGATCGTTCT+TGG | + | chr1.4:65852980-65852999 | MS.gene69935:CDS | 50.0% | |
| GCTAGAGAAGCTTGCAACAG+AGG | + | chr1.4:65852163-65852182 | MS.gene69935:CDS | 50.0% | |
| GCTTGAAGGAGTCTGATGCA+TGG | + | chr1.4:65852016-65852035 | MS.gene69935:CDS | 50.0% | |
| GCTTTCCGACAAAAAGCAGC+AGG | - | chr1.4:65852416-65852435 | None:intergenic | 50.0% | |
| GGGCCAGGAATGTGATGTAT+AGG | - | chr1.4:65853025-65853044 | None:intergenic | 50.0% | |
| GGTCCAATTAGGCTCACTTC+GGG | + | chr1.4:65853453-65853472 | MS.gene69935:CDS | 50.0% | |
| TAAATCCGATTTCCGCGAGC+CGG | + | chr1.4:65852922-65852941 | MS.gene69935:CDS | 50.0% | |
| TCATACAGGTGGAAGGGAGA+AGG | + | chr1.4:65852388-65852407 | MS.gene69935:intron | 50.0% | |
| TCTAGCCCATACGCATCTTG+TGG | - | chr1.4:65852149-65852168 | None:intergenic | 50.0% | |
| TTCCGCGAGCCGGTAAATAT+TGG | + | chr1.4:65852932-65852951 | MS.gene69935:CDS | 50.0% | |
| ! | ATTTCCATCACTGGTGCTGG+GGG | + | chr1.4:65851506-65851525 | MS.gene69935:CDS | 50.0% |
| ! | TCGGAATTGAGTGCCGCATT+GGG | + | chr1.4:65852213-65852232 | MS.gene69935:CDS | 50.0% |
| ! | TTCGGAATTGAGTGCCGCAT+TGG | + | chr1.4:65852212-65852231 | MS.gene69935:CDS | 50.0% |
| !! | ATTTACCGGCTCGCGGAAAT+CGG | - | chr1.4:65852930-65852949 | None:intergenic | 50.0% |
| !! | TGGTATTGTAGGATGGGCTG+AGG | + | chr1.4:65853329-65853348 | MS.gene69935:intron | 50.0% |
| !!! | AGGCTCCTGCTGCTTTTTGT+CGG | + | chr1.4:65852408-65852427 | MS.gene69935:CDS | 50.0% |
| AAAACCCCCAGCACCAGTGA+TGG | - | chr1.4:65851513-65851532 | None:intergenic | 55.0% | |
| ACATCACATTCCTGGCCCAG+AGG | + | chr1.4:65853027-65853046 | MS.gene69935:CDS | 55.0% | |
| AGCCTAATTGGACCGGTGCT+TGG | - | chr1.4:65853447-65853466 | None:intergenic | 55.0% | |
| AGTGGTGCAAACCCAAGCAC+CGG | + | chr1.4:65853432-65853451 | MS.gene69935:CDS | 55.0% | |
| CATCACATTCCTGGCCCAGA+GGG | + | chr1.4:65853028-65853047 | MS.gene69935:CDS | 55.0% | |
| CTGCCCGAAGTGAGCCTAAT+TGG | - | chr1.4:65853459-65853478 | None:intergenic | 55.0% | |
| GCCGCTGATATGGGTGGAAT+GGG | + | chr1.4:65851713-65851732 | MS.gene69935:CDS | 55.0% | |
| GCCTAATTGGACCGGTGCTT+GGG | - | chr1.4:65853446-65853465 | None:intergenic | 55.0% | |
| TACGACCACGAACACCCTCT+GGG | - | chr1.4:65853045-65853064 | None:intergenic | 55.0% | |
| TGCCGCTGATATGGGTGGAA+TGG | + | chr1.4:65851712-65851731 | MS.gene69935:CDS | 55.0% | |
| TTACGACCACGAACACCCTC+TGG | - | chr1.4:65853046-65853065 | None:intergenic | 55.0% | |
| TTATCGCGTCGCACTTAGCG+CGG | + | chr1.4:65851531-65851550 | MS.gene69935:CDS | 55.0% | |
| ! | GAATTGAGTGCCGCATTGGG+AGG | + | chr1.4:65852216-65852235 | MS.gene69935:CDS | 55.0% |
| !! | ACCCAAGCACCGGTCCAATT+AGG | + | chr1.4:65853442-65853461 | MS.gene69935:CDS | 55.0% |
| CTTAGCGCGGCGTCTCAAGA+AGG | + | chr1.4:65851544-65851563 | MS.gene69935:CDS | 60.0% | |
| GTCTGATGCATGGCCTGCTG+AGG | + | chr1.4:65852026-65852045 | MS.gene69935:CDS | 60.0% | |
| AGCGCGGCGTCTCAAGAAGG+AGG | + | chr1.4:65851547-65851566 | MS.gene69935:CDS | 65.0% | |
| GCGCGGCGTCTCAAGAAGGA+GGG | + | chr1.4:65851548-65851567 | MS.gene69935:CDS | 65.0% | |
| GGCTCACTTCGGGCAGCAGA+CGG | + | chr1.4:65853463-65853482 | MS.gene69935:CDS | 65.0% | |
| CCACGAACACCCTCTGGGCC+AGG | - | chr1.4:65853040-65853059 | None:intergenic | 70.0% | |
| !! | CCTGGCCCAGAGGGTGTTCG+TGG | + | chr1.4:65853037-65853056 | MS.gene69935:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 65851419 | 65853501 | 65851419 | ID=MS.gene69935 |
| chr1.4 | mRNA | 65851419 | 65853501 | 65851419 | ID=MS.gene69935.t1;Parent=MS.gene69935 |
| chr1.4 | exon | 65851419 | 65851828 | 65851419 | ID=MS.gene69935.t1.exon1;Parent=MS.gene69935.t1 |
| chr1.4 | CDS | 65851419 | 65851828 | 65851419 | ID=cds.MS.gene69935.t1;Parent=MS.gene69935.t1 |
| chr1.4 | exon | 65851951 | 65852047 | 65851951 | ID=MS.gene69935.t1.exon2;Parent=MS.gene69935.t1 |
| chr1.4 | CDS | 65851951 | 65852047 | 65851951 | ID=cds.MS.gene69935.t1;Parent=MS.gene69935.t1 |
| chr1.4 | exon | 65852146 | 65852275 | 65852146 | ID=MS.gene69935.t1.exon3;Parent=MS.gene69935.t1 |
| chr1.4 | CDS | 65852146 | 65852275 | 65852146 | ID=cds.MS.gene69935.t1;Parent=MS.gene69935.t1 |
| chr1.4 | exon | 65852396 | 65852528 | 65852396 | ID=MS.gene69935.t1.exon4;Parent=MS.gene69935.t1 |
| chr1.4 | CDS | 65852396 | 65852528 | 65852396 | ID=cds.MS.gene69935.t1;Parent=MS.gene69935.t1 |
| chr1.4 | exon | 65852916 | 65853123 | 65852916 | ID=MS.gene69935.t1.exon5;Parent=MS.gene69935.t1 |
| chr1.4 | CDS | 65852916 | 65853123 | 65852916 | ID=cds.MS.gene69935.t1;Parent=MS.gene69935.t1 |
| chr1.4 | exon | 65853340 | 65853501 | 65853340 | ID=MS.gene69935.t1.exon6;Parent=MS.gene69935.t1 |
| chr1.4 | CDS | 65853340 | 65853501 | 65853340 | ID=cds.MS.gene69935.t1;Parent=MS.gene69935.t1 |
| Gene Sequence |
| Protein sequence |
