Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75001.t1 | XP_013470225.1 | 95.8 | 600 | 24 | 1 | 1 | 600 | 88 | 686 | 0.00E+00 | 1080.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75001.t1 | P51281 | 43.9 | 569 | 287 | 4 | 3 | 554 | 11 | 564 | 2.6e-117 | 424.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75001.t1 | A0A072VS51 | 95.8 | 600 | 24 | 1 | 1 | 600 | 88 | 686 | 0.0e+00 | 1080.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049356 | MS.gene75001 | 0.855545 | 5.87E-62 | -1.69E-46 |
| MS.gene049369 | MS.gene75001 | 0.829273 | 5.64E-55 | -1.69E-46 |
| MS.gene049396 | MS.gene75001 | 0.812991 | 3.21E-51 | -1.69E-46 |
| MS.gene049488 | MS.gene75001 | 0.823663 | 1.23E-53 | -1.69E-46 |
| MS.gene049609 | MS.gene75001 | 0.825695 | 4.07E-54 | -1.69E-46 |
| MS.gene049757 | MS.gene75001 | 0.810482 | 1.13E-50 | -1.69E-46 |
| MS.gene049805 | MS.gene75001 | 0.810165 | 1.32E-50 | -1.69E-46 |
| MS.gene050122 | MS.gene75001 | 0.844942 | 5.53E-59 | -1.69E-46 |
| MS.gene050499 | MS.gene75001 | 0.829668 | 4.53E-55 | -1.69E-46 |
| MS.gene050502 | MS.gene75001 | 0.827583 | 1.44E-54 | -1.69E-46 |
| MS.gene050538 | MS.gene75001 | 0.800822 | 1.20E-48 | -1.69E-46 |
| MS.gene050553 | MS.gene75001 | 0.823214 | 1.56E-53 | -1.69E-46 |
| MS.gene050670 | MS.gene75001 | 0.851436 | 8.89E-61 | -1.69E-46 |
| MS.gene050747 | MS.gene75001 | 0.834628 | 2.68E-56 | -1.69E-46 |
| MS.gene050772 | MS.gene75001 | 0.803638 | 3.17E-49 | -1.69E-46 |
| MS.gene050950 | MS.gene75001 | 0.828603 | 8.20E-55 | -1.69E-46 |
| MS.gene05105 | MS.gene75001 | 0.840798 | 7.00E-58 | -1.69E-46 |
| MS.gene051360 | MS.gene75001 | 0.811326 | 7.40E-51 | -1.69E-46 |
| MS.gene051387 | MS.gene75001 | 0.81867 | 1.74E-52 | -1.69E-46 |
| MS.gene051525 | MS.gene75001 | 0.825779 | 3.89E-54 | -1.69E-46 |
| MS.gene051588 | MS.gene75001 | 0.806101 | 9.69E-50 | -1.69E-46 |
| MS.gene051666 | MS.gene75001 | 0.805963 | 1.04E-49 | -1.69E-46 |
| MS.gene051692 | MS.gene75001 | 0.803025 | 4.25E-49 | -1.69E-46 |
| MS.gene051838 | MS.gene75001 | 0.828543 | 8.48E-55 | -1.69E-46 |
| MS.gene051941 | MS.gene75001 | 0.84194 | 3.50E-58 | -1.69E-46 |
| MS.gene052011 | MS.gene75001 | -0.808264 | 3.37E-50 | -1.69E-46 |
| MS.gene052136 | MS.gene75001 | 0.81339 | 2.62E-51 | -1.69E-46 |
| MS.gene052164 | MS.gene75001 | 0.812158 | 4.88E-51 | -1.69E-46 |
| MS.gene052188 | MS.gene75001 | 0.802591 | 5.22E-49 | -1.69E-46 |
| MS.gene052253 | MS.gene75001 | 0.808033 | 3.78E-50 | -1.69E-46 |
| MS.gene052346 | MS.gene75001 | 0.868611 | 5.74E-66 | -1.69E-46 |
| MS.gene052414 | MS.gene75001 | 0.900431 | 7.37E-78 | -1.69E-46 |
| MS.gene052421 | MS.gene75001 | 0.817428 | 3.31E-52 | -1.69E-46 |
| MS.gene052481 | MS.gene75001 | 0.814485 | 1.50E-51 | -1.69E-46 |
| MS.gene052485 | MS.gene75001 | 0.833792 | 4.35E-56 | -1.69E-46 |
| MS.gene052501 | MS.gene75001 | 0.838269 | 3.18E-57 | -1.69E-46 |
| MS.gene052503 | MS.gene75001 | 0.817427 | 3.32E-52 | -1.69E-46 |
| MS.gene052505 | MS.gene75001 | 0.830865 | 2.31E-55 | -1.69E-46 |
| MS.gene052615 | MS.gene75001 | 0.825169 | 5.43E-54 | -1.69E-46 |
| MS.gene052823 | MS.gene75001 | 0.81831 | 2.10E-52 | -1.69E-46 |
| MS.gene052825 | MS.gene75001 | 0.815299 | 9.93E-52 | -1.69E-46 |
| MS.gene052966 | MS.gene75001 | 0.807186 | 5.72E-50 | -1.69E-46 |
| MS.gene052982 | MS.gene75001 | 0.878384 | 2.93E-69 | -1.69E-46 |
| MS.gene052999 | MS.gene75001 | 0.817832 | 2.69E-52 | -1.69E-46 |
| MS.gene053169 | MS.gene75001 | 0.83265 | 8.38E-56 | -1.69E-46 |
| MS.gene053207 | MS.gene75001 | 0.808306 | 3.31E-50 | -1.69E-46 |
| MS.gene053318 | MS.gene75001 | 0.813167 | 2.94E-51 | -1.69E-46 |
| MS.gene05335 | MS.gene75001 | 0.800494 | 1.40E-48 | -1.69E-46 |
| MS.gene053436 | MS.gene75001 | 0.82719 | 1.79E-54 | -1.69E-46 |
| MS.gene053449 | MS.gene75001 | 0.821498 | 3.91E-53 | -1.69E-46 |
| MS.gene053574 | MS.gene75001 | 0.833089 | 6.51E-56 | -1.69E-46 |
| MS.gene053626 | MS.gene75001 | 0.80458 | 2.02E-49 | -1.69E-46 |
| MS.gene053758 | MS.gene75001 | 0.804639 | 1.96E-49 | -1.69E-46 |
| MS.gene053824 | MS.gene75001 | 0.805264 | 1.45E-49 | -1.69E-46 |
| MS.gene053873 | MS.gene75001 | 0.826977 | 2.02E-54 | -1.69E-46 |
| MS.gene053912 | MS.gene75001 | 0.827127 | 1.86E-54 | -1.69E-46 |
| MS.gene054107 | MS.gene75001 | 0.810168 | 1.32E-50 | -1.69E-46 |
| MS.gene054183 | MS.gene75001 | 0.803487 | 3.41E-49 | -1.69E-46 |
| MS.gene054408 | MS.gene75001 | 0.814864 | 1.24E-51 | -1.69E-46 |
| MS.gene054556 | MS.gene75001 | 0.821351 | 4.23E-53 | -1.69E-46 |
| MS.gene054920 | MS.gene75001 | 0.802586 | 5.23E-49 | -1.69E-46 |
| MS.gene054927 | MS.gene75001 | 0.816432 | 5.55E-52 | -1.69E-46 |
| MS.gene05494 | MS.gene75001 | 0.826894 | 2.11E-54 | -1.69E-46 |
| MS.gene05505 | MS.gene75001 | 0.805652 | 1.20E-49 | -1.69E-46 |
| MS.gene055116 | MS.gene75001 | 0.814073 | 1.86E-51 | -1.69E-46 |
| MS.gene055224 | MS.gene75001 | 0.807327 | 5.34E-50 | -1.69E-46 |
| MS.gene055369 | MS.gene75001 | 0.842047 | 3.28E-58 | -1.69E-46 |
| MS.gene055539 | MS.gene75001 | 0.854002 | 1.64E-61 | -1.69E-46 |
| MS.gene055577 | MS.gene75001 | 0.809413 | 1.92E-50 | -1.69E-46 |
| MS.gene055741 | MS.gene75001 | 0.92557 | 1.53E-90 | -1.69E-46 |
| MS.gene055744 | MS.gene75001 | 0.926804 | 2.83E-91 | -1.69E-46 |
| MS.gene055909 | MS.gene75001 | 0.881242 | 2.82E-70 | -1.69E-46 |
| MS.gene055911 | MS.gene75001 | 0.886203 | 4.20E-72 | -1.69E-46 |
| MS.gene055941 | MS.gene75001 | 0.801066 | 1.07E-48 | -1.69E-46 |
| MS.gene056166 | MS.gene75001 | 0.866188 | 3.42E-65 | -1.69E-46 |
| MS.gene056346 | MS.gene75001 | 0.822945 | 1.80E-53 | -1.69E-46 |
| MS.gene056422 | MS.gene75001 | 0.804908 | 1.72E-49 | -1.69E-46 |
| MS.gene056511 | MS.gene75001 | 0.81251 | 4.09E-51 | -1.69E-46 |
| MS.gene056514 | MS.gene75001 | 0.86052 | 1.95E-63 | -1.69E-46 |
| MS.gene05664 | MS.gene75001 | 0.820188 | 7.83E-53 | -1.69E-46 |
| MS.gene056659 | MS.gene75001 | 0.805323 | 1.41E-49 | -1.69E-46 |
| MS.gene05666 | MS.gene75001 | 0.834163 | 3.51E-56 | -1.69E-46 |
| MS.gene056723 | MS.gene75001 | 0.810899 | 9.16E-51 | -1.69E-46 |
| MS.gene056877 | MS.gene75001 | 0.829375 | 5.33E-55 | -1.69E-46 |
| MS.gene057019 | MS.gene75001 | 0.860259 | 2.34E-63 | -1.69E-46 |
| MS.gene057048 | MS.gene75001 | 0.801811 | 7.55E-49 | -1.69E-46 |
| MS.gene057076 | MS.gene75001 | 0.830333 | 3.12E-55 | -1.69E-46 |
| MS.gene057086 | MS.gene75001 | 0.820652 | 6.12E-53 | -1.69E-46 |
| MS.gene057124 | MS.gene75001 | 0.862485 | 4.90E-64 | -1.69E-46 |
| MS.gene057289 | MS.gene75001 | 0.819289 | 1.26E-52 | -1.69E-46 |
| MS.gene057396 | MS.gene75001 | 0.818928 | 1.52E-52 | -1.69E-46 |
| MS.gene057476 | MS.gene75001 | 0.801017 | 1.10E-48 | -1.69E-46 |
| MS.gene057734 | MS.gene75001 | 0.851928 | 6.44E-61 | -1.69E-46 |
| MS.gene057749 | MS.gene75001 | 0.843334 | 1.49E-58 | -1.69E-46 |
| MS.gene057823 | MS.gene75001 | 0.853467 | 2.34E-61 | -1.69E-46 |
| MS.gene057825 | MS.gene75001 | 0.806258 | 8.97E-50 | -1.69E-46 |
| MS.gene057856 | MS.gene75001 | 0.804354 | 2.25E-49 | -1.69E-46 |
| MS.gene05787 | MS.gene75001 | 0.812112 | 5.00E-51 | -1.69E-46 |
| MS.gene058007 | MS.gene75001 | 0.846918 | 1.61E-59 | -1.69E-46 |
| MS.gene058120 | MS.gene75001 | 0.859103 | 5.21E-63 | -1.69E-46 |
| MS.gene058130 | MS.gene75001 | 0.833347 | 5.62E-56 | -1.69E-46 |
| MS.gene058376 | MS.gene75001 | 0.84607 | 2.74E-59 | -1.69E-46 |
| MS.gene05837 | MS.gene75001 | 0.813296 | 2.75E-51 | -1.69E-46 |
| MS.gene058444 | MS.gene75001 | 0.854504 | 1.18E-61 | -1.69E-46 |
| MS.gene058700 | MS.gene75001 | 0.857642 | 1.42E-62 | -1.69E-46 |
| MS.gene058838 | MS.gene75001 | 0.818966 | 1.49E-52 | -1.69E-46 |
| MS.gene058928 | MS.gene75001 | 0.805221 | 1.48E-49 | -1.69E-46 |
| MS.gene058948 | MS.gene75001 | 0.893653 | 5.15E-75 | -1.69E-46 |
| MS.gene058995 | MS.gene75001 | 0.805683 | 1.19E-49 | -1.69E-46 |
| MS.gene059366 | MS.gene75001 | 0.820652 | 6.13E-53 | -1.69E-46 |
| MS.gene059367 | MS.gene75001 | 0.835286 | 1.83E-56 | -1.69E-46 |
| MS.gene059368 | MS.gene75001 | 0.86718 | 1.65E-65 | -1.69E-46 |
| MS.gene059420 | MS.gene75001 | 0.859013 | 5.55E-63 | -1.69E-46 |
| MS.gene059455 | MS.gene75001 | 0.830443 | 2.93E-55 | -1.69E-46 |
| MS.gene059667 | MS.gene75001 | 0.808525 | 2.97E-50 | -1.69E-46 |
| MS.gene059674 | MS.gene75001 | 0.839848 | 1.24E-57 | -1.69E-46 |
| MS.gene059680 | MS.gene75001 | 0.808655 | 2.78E-50 | -1.69E-46 |
| MS.gene059688 | MS.gene75001 | 0.800342 | 1.51E-48 | -1.69E-46 |
| MS.gene06000 | MS.gene75001 | 0.800622 | 1.32E-48 | -1.69E-46 |
| MS.gene060372 | MS.gene75001 | 0.892991 | 9.52E-75 | -1.69E-46 |
| MS.gene060403 | MS.gene75001 | 0.804491 | 2.11E-49 | -1.69E-46 |
| MS.gene060485 | MS.gene75001 | 0.829578 | 4.76E-55 | -1.69E-46 |
| MS.gene060593 | MS.gene75001 | -0.801047 | 1.08E-48 | -1.69E-46 |
| MS.gene060778 | MS.gene75001 | 0.805205 | 1.49E-49 | -1.69E-46 |
| MS.gene060835 | MS.gene75001 | 0.849524 | 3.06E-60 | -1.69E-46 |
| MS.gene060837 | MS.gene75001 | 0.853791 | 1.89E-61 | -1.69E-46 |
| MS.gene06097 | MS.gene75001 | 0.822549 | 2.23E-53 | -1.69E-46 |
| MS.gene061154 | MS.gene75001 | 0.829953 | 3.86E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75001.t1 | MTR_1g111400 | 97.833 | 600 | 12 | 1 | 1 | 600 | 88 | 686 | 0.0 | 1195 |
| MS.gene75001.t1 | MTR_1g111400 | 98.705 | 386 | 5 | 0 | 1 | 386 | 88 | 473 | 0.0 | 793 |
| MS.gene75001.t1 | MTR_8g463650 | 49.180 | 610 | 273 | 9 | 2 | 600 | 71 | 654 | 0.0 | 549 |
| MS.gene75001.t1 | MTR_8g463650 | 52.990 | 485 | 211 | 5 | 2 | 477 | 71 | 547 | 1.25e-173 | 504 |
| MS.gene75001.t1 | MTR_8g463650 | 70.550 | 309 | 91 | 0 | 2 | 310 | 71 | 379 | 4.41e-157 | 458 |
| MS.gene75001.t1 | MTR_8g463650 | 70.550 | 309 | 91 | 0 | 2 | 310 | 71 | 379 | 1.08e-156 | 457 |
| MS.gene75001.t1 | MTR_1g076810 | 56.825 | 315 | 133 | 2 | 2 | 314 | 333 | 646 | 3.34e-113 | 352 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75001.t1 | AT3G10420 | 69.551 | 601 | 161 | 6 | 2 | 598 | 100 | 682 | 0.0 | 793 |
| MS.gene75001.t1 | AT3G10420 | 72.422 | 446 | 115 | 4 | 2 | 444 | 100 | 540 | 0.0 | 630 |
| MS.gene75001.t1 | AT1G73170 | 50.717 | 558 | 246 | 6 | 2 | 554 | 84 | 617 | 0.0 | 531 |
| MS.gene75001.t1 | AT1G73170 | 50.717 | 558 | 246 | 6 | 2 | 554 | 84 | 617 | 0.0 | 530 |
| MS.gene75001.t1 | AT1G73170 | 50.000 | 498 | 220 | 6 | 62 | 554 | 16 | 489 | 1.96e-158 | 465 |
| MS.gene75001.t1 | AT1G33290 | 56.646 | 316 | 132 | 3 | 2 | 314 | 49 | 362 | 3.11e-119 | 358 |
| MS.gene75001.t1 | AT1G33290 | 58.276 | 290 | 116 | 3 | 28 | 314 | 1 | 288 | 1.60e-113 | 341 |
| MS.gene75001.t1 | AT1G73170 | 42.507 | 367 | 182 | 6 | 193 | 554 | 1 | 343 | 8.22e-81 | 260 |
| MS.gene75001.t1 | AT1G33290 | 53.191 | 188 | 72 | 3 | 2 | 174 | 49 | 235 | 8.20e-55 | 188 |
| MS.gene75001.t1 | AT1G33290 | 51.389 | 72 | 34 | 1 | 243 | 314 | 216 | 286 | 6.10e-15 | 76.3 |
Find 155 sgRNAs with CRISPR-Local
Find 285 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCATTATAATTGATGAAAT+TGG | 0.186337 | 1.4:-85312396 | MS.gene75001:CDS |
| ATTGAAGTTGTTATGGATTT+AGG | 0.190737 | 1.4:-85313728 | MS.gene75001:CDS |
| GTTTCTTCATGGCTTATTTC+AGG | 0.202929 | 1.4:+85311695 | None:intergenic |
| TTCAACTGTGGATGCTATTT+TGG | 0.203491 | 1.4:-85311903 | MS.gene75001:CDS |
| TCATCAATTATAATGGTTTC+AGG | 0.225693 | 1.4:+85312402 | None:intergenic |
| TCATCGTCAATTTCAATATC+TGG | 0.234846 | 1.4:+85310991 | None:intergenic |
| TTGAATCATTCAGGTAAAAT+AGG | 0.252962 | 1.4:+85309833 | None:intergenic |
| CTAGATTCCCTTCTGGTGAT+TGG | 0.254727 | 1.4:-85313691 | MS.gene75001:CDS |
| TCCAATTTCATCAATTATAA+TGG | 0.266424 | 1.4:+85312395 | None:intergenic |
| TTAAAATGTTGACCTGATTA+AGG | 0.273025 | 1.4:+85312909 | None:intergenic |
| GCGTAAATCATCATGGTTAA+TGG | 0.273696 | 1.4:+85313652 | None:intergenic |
| AGCGGAGCTTGATATGTTTC+TGG | 0.292311 | 1.4:-85313810 | None:intergenic |
| GTGGATACATCCAATGAAAT+TGG | 0.294748 | 1.4:-85312653 | MS.gene75001:CDS |
| ACTAGACTTGGAGGGTCTTT+TGG | 0.295771 | 1.4:+85309943 | None:intergenic |
| TCATGGCTTATTTCAGGTAT+TGG | 0.299020 | 1.4:+85311701 | None:intergenic |
| ACTATTATCACTCCATTTCA+TGG | 0.305396 | 1.4:+85311586 | None:intergenic |
| TTAAATCCGATGTTTCTTCA+TGG | 0.331868 | 1.4:+85311684 | None:intergenic |
| CCTTATCTTCAGATCCTTGT+TGG | 0.338669 | 1.4:-85312273 | MS.gene75001:CDS |
| TTTACGCCACGCCATTTCTA+AGG | 0.343073 | 1.4:-85313636 | MS.gene75001:intron |
| CCACTATTACTACGCGCTTC+AGG | 0.363898 | 1.4:+85312672 | None:intergenic |
| CTATGCTGCATATTCACATT+TGG | 0.364142 | 1.4:+85312575 | None:intergenic |
| ATGAACACGACATTCAGTTT+TGG | 0.374118 | 1.4:+85311937 | None:intergenic |
| TGGACTCATTGAAGTTGTTA+TGG | 0.376901 | 1.4:-85313735 | MS.gene75001:CDS |
| TAGATTCCCTTCTGGTGATT+GGG | 0.380201 | 1.4:-85313690 | MS.gene75001:CDS |
| ATATCTGGAGACTCATTTGA+TGG | 0.383132 | 1.4:+85311006 | None:intergenic |
| TCCGTCACCTCCAATTTCAT+TGG | 0.385683 | 1.4:+85312643 | None:intergenic |
| TTCGTATACGGCAGGAGGTT+CGG | 0.386900 | 1.4:-85310138 | MS.gene75001:intron |
| CTGAATGTCGTGTTCATCAT+AGG | 0.387994 | 1.4:-85311931 | MS.gene75001:CDS |
| CCTCTTGCTAGATTCCCTTC+TGG | 0.390859 | 1.4:-85313698 | MS.gene75001:CDS |
| CTGAGTTACGACAGAATTCA+TGG | 0.392309 | 1.4:-85311244 | MS.gene75001:CDS |
| TCCAGCGATGGTTTGCGCTT+CGG | 0.392463 | 1.4:+85310964 | None:intergenic |
| TGCTAAAATCATACATGATC+TGG | 0.404375 | 1.4:-85312986 | MS.gene75001:CDS |
| CAGTATTTGAAGTCCGTCAT+TGG | 0.410784 | 1.4:-85311757 | MS.gene75001:CDS |
| ATTCTTCATTATGCTTTCAA+TGG | 0.418087 | 1.4:+85312296 | None:intergenic |
| AGCATGCTTCACCAAATCAT+TGG | 0.420342 | 1.4:+85311724 | None:intergenic |
| CGTAAATCATCATGGTTAAT+GGG | 0.421646 | 1.4:+85313653 | None:intergenic |
| TTGGTAAAACTACCTTAATC+AGG | 0.424584 | 1.4:-85312921 | MS.gene75001:intron |
| TTCCTCATGCAGGCATAGGC+AGG | 0.427872 | 1.4:-85312616 | MS.gene75001:CDS |
| TGCTCAAAGAGGAGTTCAAT+TGG | 0.429380 | 1.4:-85312340 | MS.gene75001:CDS |
| TGAGGAAGGAGGTTCTATAT+TGG | 0.434005 | 1.4:-85312962 | MS.gene75001:CDS |
| GGAGGTTCTATATTGGTCAT+TGG | 0.436397 | 1.4:-85312955 | MS.gene75001:CDS |
| GTTTCTGGAACTTCTTCCAT+TGG | 0.437811 | 1.4:-85313795 | MS.gene75001:CDS |
| ATCCCACTCGATCCATGAAA+TGG | 0.438370 | 1.4:-85311598 | MS.gene75001:CDS |
| GGTAGTGGTGGCGGCGGCAA+TGG | 0.441263 | 1.4:-85309875 | MS.gene75001:CDS |
| ATATTGGTCATTGGACCTCC+TGG | 0.442400 | 1.4:-85312946 | MS.gene75001:CDS |
| CAATGACGGACTTCAAATAC+TGG | 0.449272 | 1.4:+85311758 | None:intergenic |
| TGAGAACAAATACAGGTAAC+TGG | 0.450824 | 1.4:+85311198 | None:intergenic |
| AGAGTAGAGTACCTTAGAAA+TGG | 0.453739 | 1.4:+85313625 | None:intergenic |
| GATCCTTGTTGGTGGTATAG+AGG | 0.456580 | 1.4:-85312262 | MS.gene75001:intron |
| AGTATTTGAAGTCCGTCATT+GGG | 0.460558 | 1.4:-85311756 | MS.gene75001:CDS |
| TTGAATAGAGTGTAACTCTC+GGG | 0.466591 | 1.4:-85312048 | MS.gene75001:intron |
| GCTGATGCAATTCTTGCATC+CGG | 0.468276 | 1.4:-85311269 | MS.gene75001:CDS |
| AACCGTCAGATGCAAATCAT+TGG | 0.469178 | 1.4:-85313045 | MS.gene75001:CDS |
| CAATGAGTCCACCAATCTCT+TGG | 0.470658 | 1.4:+85313747 | None:intergenic |
| ATAGAGTACATAGTGATTCC+TGG | 0.476995 | 1.4:-85310109 | MS.gene75001:CDS |
| CCTGAAGCGCGTAGTAATAG+TGG | 0.478310 | 1.4:-85312672 | MS.gene75001:CDS |
| TTCTTTATCGTGGAGCCAAA+GGG | 0.483101 | 1.4:+85311030 | None:intergenic |
| TCAATAATTTCAGAACGTCT+TGG | 0.487672 | 1.4:+85310064 | None:intergenic |
| CAAAGAGGAGTTCAATTGGT+TGG | 0.488544 | 1.4:-85312336 | MS.gene75001:CDS |
| CCAACAAGGATCTGAAGATA+AGG | 0.493089 | 1.4:+85312273 | None:intergenic |
| CAATTGGTTGGAACAGCACA+TGG | 0.496072 | 1.4:-85312324 | MS.gene75001:CDS |
| GCTGGAAGAGATTGACGCCT+TGG | 0.496312 | 1.4:-85310947 | MS.gene75001:CDS |
| TATCTTCAGATCCTTGTTGG+TGG | 0.497033 | 1.4:-85312270 | MS.gene75001:CDS |
| ACCGAAGCGCAAACCATCGC+TGG | 0.503492 | 1.4:-85310965 | MS.gene75001:CDS |
| GAGTGTAACTCTCGGGGATG+AGG | 0.503582 | 1.4:-85312041 | MS.gene75001:CDS |
| CTCTCGGGGATGAGGAAGCC+AGG | 0.505259 | 1.4:-85312033 | MS.gene75001:CDS |
| CAGAGAGACTGCTAGGATGC+TGG | 0.505835 | 1.4:-85312705 | MS.gene75001:CDS |
| GTTACCTGTATTTGTTCTCA+AGG | 0.506262 | 1.4:-85311195 | MS.gene75001:intron |
| ATTGGCCTTACTTGTCGTGT+TGG | 0.509211 | 1.4:-85313027 | MS.gene75001:CDS |
| TGCAAAAGACAATTCTAGAA+AGG | 0.510028 | 1.4:-85312000 | MS.gene75001:CDS |
| CTTCTTTATCGTGGAGCCAA+AGG | 0.510592 | 1.4:+85311029 | None:intergenic |
| ATGAAATGGAGTGATAATAG+TGG | 0.514888 | 1.4:-85311584 | MS.gene75001:CDS |
| ATCCTCGGGCTAGAACCCTT+TGG | 0.516202 | 1.4:-85311045 | MS.gene75001:CDS |
| CTCGACCAACACGACAAGTA+AGG | 0.517747 | 1.4:+85313022 | None:intergenic |
| GTACGAGTAGCAAAAGTGAT+GGG | 0.518119 | 1.4:-85311332 | MS.gene75001:CDS |
| GTCATTGGACCTCCTGGTGT+TGG | 0.524184 | 1.4:-85312940 | MS.gene75001:CDS |
| TTGTATCGCCACCAAGAGAT+TGG | 0.524330 | 1.4:-85313758 | MS.gene75001:CDS |
| TGCATCGTATAAGTGCAATT+CGG | 0.526874 | 1.4:-85313068 | MS.gene75001:CDS |
| GGAAACAGAACTAGACTTGG+AGG | 0.530671 | 1.4:+85309934 | None:intergenic |
| AACTTCTTCCATTGGAGATG+AGG | 0.532842 | 1.4:-85313787 | MS.gene75001:CDS |
| AAATCTGCTGGTAGTGGTGG+CGG | 0.535701 | 1.4:-85309884 | MS.gene75001:CDS |
| GGAAGAGATTGACGCCTTGG+AGG | 0.536207 | 1.4:-85310944 | MS.gene75001:intron |
| GGGATGAGGAAGCCAGGAAA+AGG | 0.537182 | 1.4:-85312027 | MS.gene75001:CDS |
| CAAGGGAAGAATCTGCAACC+TGG | 0.537532 | 1.4:+85309976 | None:intergenic |
| ATTCTGTCGTAACTCAGAAC+CGG | 0.538742 | 1.4:+85311250 | None:intergenic |
| TCCAATGAAATTGGAGGTGA+CGG | 0.539462 | 1.4:-85312644 | MS.gene75001:CDS |
| ATTTGATGGCTTCTTTATCG+TGG | 0.539478 | 1.4:+85311020 | None:intergenic |
| GGCACCTTGAGAACAAATAC+AGG | 0.540365 | 1.4:+85311191 | None:intergenic |
| GATTCCTGGTGGAGAGGCTG+TGG | 0.540843 | 1.4:-85310095 | MS.gene75001:CDS |
| GGCCAATGATTTGCATCTGA+CGG | 0.543218 | 1.4:+85313043 | None:intergenic |
| GCGTCAATCTCTTCCAGCGA+TGG | 0.543519 | 1.4:+85310952 | None:intergenic |
| ATGCAGGCATAGGCAGGGCG+AGG | 0.546724 | 1.4:-85312610 | MS.gene75001:CDS |
| TTTGCACAAGTTCAATCTGC+CGG | 0.546806 | 1.4:+85310041 | None:intergenic |
| TCTTCCATTGGAGATGAGGA+TGG | 0.549063 | 1.4:-85313783 | MS.gene75001:CDS |
| GACGGAGATGTTCCTCATGC+AGG | 0.549892 | 1.4:-85312626 | MS.gene75001:CDS |
| TCTGCTGGTAGTGGTGGCGG+CGG | 0.551281 | 1.4:-85309881 | MS.gene75001:CDS |
| AATCATACATGATCTGGTTG+AGG | 0.551401 | 1.4:-85312980 | MS.gene75001:CDS |
| GATGTTCCTCATGCAGGCAT+AGG | 0.555685 | 1.4:-85312620 | MS.gene75001:CDS |
| GACGTTCTGAAATTATTGAC+CGG | 0.556854 | 1.4:-85310060 | MS.gene75001:CDS |
| CAGTTGGCTGCTGAAAAGTC+AGG | 0.557070 | 1.4:-85310013 | MS.gene75001:CDS |
| AGTTCCACAGCCTCTCCACC+AGG | 0.563344 | 1.4:+85310091 | None:intergenic |
| TTTGAATAGAGTGTAACTCT+CGG | 0.564422 | 1.4:-85312049 | MS.gene75001:intron |
| GGCTGCTGAAAAGTCAGGTA+CGG | 0.565693 | 1.4:-85310008 | MS.gene75001:CDS |
| TTGAACTCCTCTTTGAGCAA+TGG | 0.567809 | 1.4:+85312344 | None:intergenic |
| AATTCCATCCTCATCTCCAA+TGG | 0.572936 | 1.4:+85313779 | None:intergenic |
| CAGGCATAGGCAGGGCGAGG+AGG | 0.576115 | 1.4:-85312607 | MS.gene75001:CDS |
| ATAGAAGTAACTGATGACAT+TGG | 0.579181 | 1.4:-85311296 | MS.gene75001:CDS |
| CATAGTGATTCCTGGTGGAG+AGG | 0.582191 | 1.4:-85310101 | MS.gene75001:CDS |
| TGAGTCCACCAATCTCTTGG+TGG | 0.584820 | 1.4:+85313750 | None:intergenic |
| TCAACAGCACACGTAAATGT+AGG | 0.586604 | 1.4:+85311968 | None:intergenic |
| GCAGGAAACAGAACTAGACT+TGG | 0.587939 | 1.4:+85309931 | None:intergenic |
| TACTTGTCGTGTTGGTCGAG+CGG | 0.590539 | 1.4:-85313019 | MS.gene75001:CDS |
| GATTGTGCAGAGAGACTGCT+AGG | 0.591378 | 1.4:-85312712 | MS.gene75001:intron |
| GATACATCCAATGAAATTGG+AGG | 0.595729 | 1.4:-85312650 | MS.gene75001:CDS |
| GCAAGTACCATTGCTCAAAG+AGG | 0.597613 | 1.4:-85312351 | MS.gene75001:CDS |
| GGTTGCAGATTCTTCCCTTG+AGG | 0.597711 | 1.4:-85309973 | MS.gene75001:CDS |
| GCAATGGTACCACTGTCACT+AGG | 0.597867 | 1.4:-85309859 | MS.gene75001:CDS |
| TATCGCCACCAAGAGATTGG+TGG | 0.601041 | 1.4:-85313755 | MS.gene75001:CDS |
| ATACATGATCTGGTTGAGGA+AGG | 0.605235 | 1.4:-85312976 | MS.gene75001:CDS |
| ACTCCATTTCATGGATCGAG+TGG | 0.607616 | 1.4:+85311595 | None:intergenic |
| CAGGTACGGATCAAAACACC+AGG | 0.608144 | 1.4:-85309994 | MS.gene75001:CDS |
| AGTACGAGTAGCAAAAGTGA+TGG | 0.608386 | 1.4:-85311333 | MS.gene75001:CDS |
| AGAAAAGGGTTGTACCTCCA+AGG | 0.608824 | 1.4:+85310930 | None:intergenic |
| CATGATCTGGTTGAGGAAGG+AGG | 0.608961 | 1.4:-85312973 | MS.gene75001:CDS |
| TTGCAGGTGTACACTTGCAT+TGG | 0.612087 | 1.4:+85311539 | None:intergenic |
| AAGACAATTCTAGAAAGGAA+AGG | 0.613874 | 1.4:-85311995 | MS.gene75001:CDS |
| ATAGTGGATCTGTGATCAAG+AGG | 0.617190 | 1.4:-85311568 | MS.gene75001:CDS |
| TCCTCATGCAGGCATAGGCA+GGG | 0.617902 | 1.4:-85312615 | MS.gene75001:CDS |
| TTCATTGCAGTCCAATACCA+TGG | 0.618171 | 1.4:-85311094 | MS.gene75001:intron |
| TGGCGTGGCGTAAATCATCA+TGG | 0.622075 | 1.4:+85313645 | None:intergenic |
| ACTTGTGCAAAGCTATCAGT+TGG | 0.624557 | 1.4:-85310029 | MS.gene75001:CDS |
| GAAATGACCCAATCACCAGA+AGG | 0.627070 | 1.4:+85313683 | None:intergenic |
| CGTGTTGGTCGAGCGGTGAG+TGG | 0.630353 | 1.4:-85313012 | MS.gene75001:CDS |
| CTCCATTTCATGGATCGAGT+GGG | 0.632603 | 1.4:+85311596 | None:intergenic |
| AATAAGCCATGAAGAAACAT+CGG | 0.634610 | 1.4:-85311690 | MS.gene75001:CDS |
| CGACAGAATTCATGGATCCG+TGG | 0.635339 | 1.4:-85311236 | MS.gene75001:CDS |
| GCCCTGCCTATGCCTGCATG+AGG | 0.636859 | 1.4:+85312614 | None:intergenic |
| AGCCAAAGGGTTCTAGCCCG+AGG | 0.638981 | 1.4:+85311043 | None:intergenic |
| ATGAGCTATCAATACCAGAT+CGG | 0.639378 | 1.4:+85313091 | None:intergenic |
| AAATGACCCAATCACCAGAA+GGG | 0.644980 | 1.4:+85313684 | None:intergenic |
| GAAACAGAACTAGACTTGGA+GGG | 0.645076 | 1.4:+85309935 | None:intergenic |
| AATAGGAAGCCTAGTGACAG+TGG | 0.645088 | 1.4:+85309850 | None:intergenic |
| TGAATAGAGTGTAACTCTCG+GGG | 0.654334 | 1.4:-85312047 | MS.gene75001:intron |
| GAACAAATACAGGTAACTGG+TGG | 0.660255 | 1.4:+85311201 | None:intergenic |
| AGAGTACCTTAGAAATGGCG+TGG | 0.660342 | 1.4:+85313630 | None:intergenic |
| CCAGAAGGGAATCTAGCAAG+AGG | 0.661778 | 1.4:+85313698 | None:intergenic |
| TACGAGTAGCAAAAGTGATG+GGG | 0.668625 | 1.4:-85311331 | MS.gene75001:CDS |
| AATGCAAGTGTACACCTGCA+AGG | 0.668958 | 1.4:-85311537 | MS.gene75001:intron |
| TGACGGACTTCAAATACTGG+AGG | 0.672492 | 1.4:+85311761 | None:intergenic |
| GCACCTCTATACCACCAACA+AGG | 0.695466 | 1.4:+85312259 | None:intergenic |
| GAGTACATAGTGATTCCTGG+TGG | 0.700030 | 1.4:-85310106 | MS.gene75001:CDS |
| GGTGGAATTTCGCAACACCA+CGG | 0.701018 | 1.4:+85311219 | None:intergenic |
| ACAGCACACGTAAATGTAGG+TGG | 0.701363 | 1.4:+85311971 | None:intergenic |
| TCATAGGTTAGATTCAACTG+TGG | 0.703566 | 1.4:-85311915 | MS.gene75001:CDS |
| TTCTGACAGAGAGTATGACG+AGG | 0.719203 | 1.4:-85311636 | MS.gene75001:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAACTAGATAAAATAAAA+AGG | + | chr1.4:85310886-85310905 | None:intergenic | 10.0% |
| !! | TTATTATTATTATGAATAAG+TGG | + | chr1.4:85310067-85310086 | None:intergenic | 10.0% |
| !!! | CTTATTTTATTTCTTAATAA+CGG | - | chr1.4:85312234-85312253 | MS.gene75001:intron | 10.0% |
| !!! | TTATTTTATTTCTTAATAAC+GGG | - | chr1.4:85312235-85312254 | MS.gene75001:intron | 10.0% |
| !! | AACACAATAATAAATAATCT+AGG | + | chr1.4:85313439-85313458 | None:intergenic | 15.0% |
| !! | TGTACTTTACATTAATTAAT+TGG | - | chr1.4:85310208-85310227 | MS.gene75001:intron | 15.0% |
| !!! | AATTTTATTGTATTCGTATA+CGG | - | chr1.4:85313485-85313504 | MS.gene75001:intron | 15.0% |
| !! | AAAATTCATTATAAGGCAAA+AGG | + | chr1.4:85312515-85312534 | None:intergenic | 20.0% |
| !! | AAATTAGATACTAATTGAGT+GGG | + | chr1.4:85312732-85312751 | None:intergenic | 20.0% |
| !! | ACCATTATAATTGATGAAAT+TGG | - | chr1.4:85311239-85311258 | MS.gene75001:CDS | 20.0% |
| !! | AGGAACAAAAATTCATTATA+AGG | + | chr1.4:85312522-85312541 | None:intergenic | 20.0% |
| !! | ATTATAAATCATAACCTTGA+AGG | + | chr1.4:85311424-85311443 | None:intergenic | 20.0% |
| !! | GCAGTATTTATTTAGTTATT+TGG | - | chr1.4:85311811-85311830 | MS.gene75001:intron | 20.0% |
| !! | TCCAATTTCATCAATTATAA+TGG | + | chr1.4:85311243-85311262 | None:intergenic | 20.0% |
| !! | TGATCTTAAAAAATGTTTAC+AGG | + | chr1.4:85313289-85313308 | None:intergenic | 20.0% |
| !! | TTAAACAATTGTGTTTGAAT+TGG | - | chr1.4:85313397-85313416 | MS.gene75001:intron | 20.0% |
| !!! | TCAGTTTGTATTTTTAATGT+GGG | - | chr1.4:85310170-85310189 | MS.gene75001:intron | 20.0% |
| ! | AAAATAAAAAGGAAACTGAC+AGG | + | chr1.4:85310875-85310894 | None:intergenic | 25.0% |
| ! | AATTGTTTATCCAAAAACAG+AGG | + | chr1.4:85310037-85310056 | None:intergenic | 25.0% |
| ! | ATAAATGCGCTAAAAAGAAA+AGG | + | chr1.4:85312863-85312882 | None:intergenic | 25.0% |
| ! | ATAACTAAGTAAATGTCGAA+AGG | - | chr1.4:85310441-85310460 | MS.gene75001:intron | 25.0% |
| ! | ATAACTCAAATTTCACAAGT+CGG | + | chr1.4:85313223-85313242 | None:intergenic | 25.0% |
| ! | ATATTCCATTATAGAAGATG+AGG | + | chr1.4:85311766-85311785 | None:intergenic | 25.0% |
| ! | ATCAATAAACATCATTAACG+TGG | + | chr1.4:85311560-85311579 | None:intergenic | 25.0% |
| ! | ATTCTTCATTATGCTTTCAA+TGG | + | chr1.4:85311342-85311361 | None:intergenic | 25.0% |
| ! | ATTGAAGTTGTTATGGATTT+AGG | - | chr1.4:85309907-85309926 | MS.gene75001:CDS | 25.0% |
| ! | GAAATTAGATACTAATTGAG+TGG | + | chr1.4:85312733-85312752 | None:intergenic | 25.0% |
| ! | GTAAAGTACATAAAGAACAT+TGG | + | chr1.4:85310198-85310217 | None:intergenic | 25.0% |
| ! | TCATCAATTATAATGGTTTC+AGG | + | chr1.4:85311236-85311255 | None:intergenic | 25.0% |
| ! | TTAAAATGTTGACCTGATTA+AGG | + | chr1.4:85310729-85310748 | None:intergenic | 25.0% |
| !! | GTTGTTTGGTTTATTGTTAT+AGG | - | chr1.4:85310499-85310518 | MS.gene75001:intron | 25.0% |
| !! | TAAACCAAATTGTAAGTTGA+GGG | - | chr1.4:85313253-85313272 | MS.gene75001:intron | 25.0% |
| !! | TAAGAAATTTGTTCCTTCAA+TGG | + | chr1.4:85312206-85312225 | None:intergenic | 25.0% |
| !! | TAATGGATATAATGGTTGTT+TGG | - | chr1.4:85310485-85310504 | MS.gene75001:intron | 25.0% |
| !! | TCTAAGATTAAAGTCTGTAA+AGG | + | chr1.4:85313175-85313194 | None:intergenic | 25.0% |
| !! | TTGATTCAATCTTTGAAAGA+AGG | + | chr1.4:85311489-85311508 | None:intergenic | 25.0% |
| !! | TTTGGTTTATTGTTATAGGT+TGG | - | chr1.4:85310503-85310522 | MS.gene75001:intron | 25.0% |
| !!! | CAGTTTGTATTTTTAATGTG+GGG | - | chr1.4:85310171-85310190 | MS.gene75001:intron | 25.0% |
| !!! | CTCAGTTTGTATTTTTAATG+TGG | - | chr1.4:85310169-85310188 | MS.gene75001:intron | 25.0% |
| !!! | CTCTTATTTATTTTCCTTCA+AGG | - | chr1.4:85311407-85311426 | MS.gene75001:intron | 25.0% |
| !!! | CTGCAAGGTAAATTATTTTT+GGG | - | chr1.4:85312113-85312132 | MS.gene75001:intron | 25.0% |
| !!! | TTGAAGAGTAATGGATATAA+TGG | - | chr1.4:85310477-85310496 | MS.gene75001:intron | 25.0% |
| !!! | TTTCTGATTTTTTAACTCGA+GGG | - | chr1.4:85313347-85313366 | MS.gene75001:intron | 25.0% |
| AAATATTTCGCACAGAAGAT+GGG | + | chr1.4:85312768-85312787 | None:intergenic | 30.0% | |
| AATAAGCCATGAAGAAACAT+CGG | - | chr1.4:85311945-85311964 | MS.gene75001:CDS | 30.0% | |
| AATTGACTGCTTCATCTTTA+TGG | - | chr1.4:85311112-85311131 | MS.gene75001:intron | 30.0% | |
| ACTATTATCACTCCATTTCA+TGG | + | chr1.4:85312052-85312071 | None:intergenic | 30.0% | |
| AGAGAATATTATCAGGATTC+AGG | - | chr1.4:85312151-85312170 | MS.gene75001:intron | 30.0% | |
| ATAGAAGTAACTGATGACAT+TGG | - | chr1.4:85312339-85312358 | MS.gene75001:CDS | 30.0% | |
| ATGAAATGGAGTGATAATAG+TGG | - | chr1.4:85312051-85312070 | MS.gene75001:intron | 30.0% | |
| ATTGAAGCAATTGTTGAAAG+AGG | + | chr1.4:85312485-85312504 | None:intergenic | 30.0% | |
| ATTTGCAATCTAATCTTCTG+TGG | - | chr1.4:85311149-85311168 | MS.gene75001:intron | 30.0% | |
| CCAAAAATAATTTACCTTGC+AGG | + | chr1.4:85312115-85312134 | None:intergenic | 30.0% | |
| CGTAAATCATCATGGTTAAT+GGG | + | chr1.4:85309985-85310004 | None:intergenic | 30.0% | |
| CTAAACCAAATTGTAAGTTG+AGG | - | chr1.4:85313252-85313271 | MS.gene75001:intron | 30.0% | |
| GATCATATCACATTTAGTCT+AGG | - | chr1.4:85313304-85313323 | MS.gene75001:intron | 30.0% | |
| GTATTCCTCATCTTCTATAA+TGG | - | chr1.4:85311758-85311777 | MS.gene75001:CDS | 30.0% | |
| TAAATATTTCGCACAGAAGA+TGG | + | chr1.4:85312769-85312788 | None:intergenic | 30.0% | |
| TAGAAAATCTTCTCTGTTAC+AGG | - | chr1.4:85311847-85311866 | MS.gene75001:intron | 30.0% | |
| TAGTACTAATCTCACTCATT+TGG | - | chr1.4:85311086-85311105 | MS.gene75001:CDS | 30.0% | |
| TCAATAATTTCAGAACGTCT+TGG | + | chr1.4:85313574-85313593 | None:intergenic | 30.0% | |
| TCATCGTCAATTTCAATATC+TGG | + | chr1.4:85312647-85312666 | None:intergenic | 30.0% | |
| TCTAACTTATCCTGCAAAAT+TGG | - | chr1.4:85312968-85312987 | MS.gene75001:CDS | 30.0% | |
| TGAAAGTTACACATTAAGTG+TGG | + | chr1.4:85313044-85313063 | None:intergenic | 30.0% | |
| TGCTAAAATCATACATGATC+TGG | - | chr1.4:85310649-85310668 | MS.gene75001:intron | 30.0% | |
| TTAAATAGATCCATCCATTC+CGG | - | chr1.4:85311457-85311476 | MS.gene75001:intron | 30.0% | |
| TTAAATCCGATGTTTCTTCA+TGG | + | chr1.4:85311954-85311973 | None:intergenic | 30.0% | |
| TTCCAAATAAACAAGTCACT+TGG | + | chr1.4:85310124-85310143 | None:intergenic | 30.0% | |
| TTGGTAAAACTACCTTAATC+AGG | - | chr1.4:85310714-85310733 | MS.gene75001:intron | 30.0% | |
| TTTCAACAATTGCTTCAATG+TGG | - | chr1.4:85312486-85312505 | MS.gene75001:intron | 30.0% | |
| TTTGAATAGAGTGTAACTCT+CGG | - | chr1.4:85311586-85311605 | MS.gene75001:CDS | 30.0% | |
| ! | AAATTTCACAAGTCGGTTTA+GGG | + | chr1.4:85313216-85313235 | None:intergenic | 30.0% |
| ! | AAGACAATTCTAGAAAGGAA+AGG | - | chr1.4:85311640-85311659 | MS.gene75001:CDS | 30.0% |
| ! | ACTTACAATTTGGTTTAGAG+AGG | + | chr1.4:85313250-85313269 | None:intergenic | 30.0% |
| ! | ACTTTACAAACCAATTTTGC+AGG | + | chr1.4:85312981-85313000 | None:intergenic | 30.0% |
| ! | CCTGCAAGGTAAATTATTTT+TGG | - | chr1.4:85312112-85312131 | MS.gene75001:intron | 30.0% |
| ! | CTTTTTACTATGTCTGTATG+TGG | - | chr1.4:85310754-85310773 | MS.gene75001:intron | 30.0% |
| ! | GGATGATTTTTCCAATGATT+TGG | - | chr1.4:85311900-85311919 | MS.gene75001:CDS | 30.0% |
| ! | TCAATCTTTGAAAGAAGGAT+GGG | + | chr1.4:85311484-85311503 | None:intergenic | 30.0% |
| ! | TCATTTTCATGTTCCATTGA+AGG | - | chr1.4:85312190-85312209 | MS.gene75001:intron | 30.0% |
| ! | TGCAAAAGACAATTCTAGAA+AGG | - | chr1.4:85311635-85311654 | MS.gene75001:CDS | 30.0% |
| ! | TTCAATCTTTGAAAGAAGGA+TGG | + | chr1.4:85311485-85311504 | None:intergenic | 30.0% |
| ! | TTTGGGTCTTATAGAATGAT+TGG | - | chr1.4:85312837-85312856 | MS.gene75001:intron | 30.0% |
| ! | TTTTTGTCGTTGAAGAGTAA+TGG | - | chr1.4:85310468-85310487 | MS.gene75001:intron | 30.0% |
| !!! | GTTATAGGTTGGTGATTTTT+CGG | - | chr1.4:85310514-85310533 | MS.gene75001:intron | 30.0% |
| !!! | GTTTCTGATTTTTTAACTCG+AGG | - | chr1.4:85313346-85313365 | MS.gene75001:intron | 30.0% |
| AAAGAGGTAGCAATAGCAAA+AGG | + | chr1.4:85312469-85312488 | None:intergenic | 35.0% | |
| AAAGTCTGTAAAGGATCTGT+TGG | + | chr1.4:85313166-85313185 | None:intergenic | 35.0% | |
| AAGAGGTAGCAATAGCAAAA+GGG | + | chr1.4:85312468-85312487 | None:intergenic | 35.0% | |
| AAGGCAGTAAAAATGATCCT+CGG | - | chr1.4:85312575-85312594 | MS.gene75001:CDS | 35.0% | |
| AAGTCTGTAAAGGATCTGTT+GGG | + | chr1.4:85313165-85313184 | None:intergenic | 35.0% | |
| AATCATACATGATCTGGTTG+AGG | - | chr1.4:85310655-85310674 | MS.gene75001:intron | 35.0% | |
| ACATCCCTCAACTTACAATT+TGG | + | chr1.4:85313260-85313279 | None:intergenic | 35.0% | |
| ATAGAGTACATAGTGATTCC+TGG | - | chr1.4:85313526-85313545 | MS.gene75001:intron | 35.0% | |
| ATATCTGGAGACTCATTTGA+TGG | + | chr1.4:85312632-85312651 | None:intergenic | 35.0% | |
| ATGAGCTATCAATACCAGAT+CGG | + | chr1.4:85310547-85310566 | None:intergenic | 35.0% | |
| CACAAATGAGCATACACAAA+AGG | + | chr1.4:85312896-85312915 | None:intergenic | 35.0% | |
| CACACTACAAAAACTCAGTT+TGG | + | chr1.4:85310389-85310408 | None:intergenic | 35.0% | |
| CACTAGCAGTTCTTAGATTT+GGG | - | chr1.4:85312940-85312959 | MS.gene75001:CDS | 35.0% | |
| CATGCATCATACGTAAAAGT+GGG | + | chr1.4:85310259-85310278 | None:intergenic | 35.0% | |
| CGCGCTATACATATTTCATT+AGG | + | chr1.4:85311534-85311553 | None:intergenic | 35.0% | |
| CTATGCTGCATATTCACATT+TGG | + | chr1.4:85311063-85311082 | None:intergenic | 35.0% | |
| CTTCAAGTGCTTAGTTGTTT+GGG | - | chr1.4:85312820-85312839 | MS.gene75001:intron | 35.0% | |
| GATACATCCAATGAAATTGG+AGG | - | chr1.4:85310985-85311004 | MS.gene75001:CDS | 35.0% | |
| GCGTAAATCATCATGGTTAA+TGG | + | chr1.4:85309986-85310005 | None:intergenic | 35.0% | |
| GCTCTATAATGTCAAGTCTT+AGG | + | chr1.4:85313083-85313102 | None:intergenic | 35.0% | |
| GTCCAAAAAATAGGTCACTT+GGG | + | chr1.4:85313110-85313129 | None:intergenic | 35.0% | |
| GTGGATACATCCAATGAAAT+TGG | - | chr1.4:85310982-85311001 | MS.gene75001:CDS | 35.0% | |
| GTTACCTGTATTTGTTCTCA+AGG | - | chr1.4:85312440-85312459 | MS.gene75001:intron | 35.0% | |
| GTTTCTTCATGGCTTATTTC+AGG | + | chr1.4:85311943-85311962 | None:intergenic | 35.0% | |
| TACCATGGCAAAAATGGTAA+AGG | - | chr1.4:85312556-85312575 | MS.gene75001:intron | 35.0% | |
| TCATAGGTTAGATTCAACTG+TGG | - | chr1.4:85311720-85311739 | MS.gene75001:CDS | 35.0% | |
| TGAGAACAAATACAGGTAAC+TGG | + | chr1.4:85312440-85312459 | None:intergenic | 35.0% | |
| TGATAACATACGACGAGTTT+AGG | + | chr1.4:85310352-85310371 | None:intergenic | 35.0% | |
| TGCATCGTATAAGTGCAATT+CGG | - | chr1.4:85310567-85310586 | MS.gene75001:intron | 35.0% | |
| TGCTGGTAGAGAATATTATC+AGG | - | chr1.4:85312144-85312163 | MS.gene75001:intron | 35.0% | |
| TGGAAAAATCATCCCAATGA+CGG | + | chr1.4:85311894-85311913 | None:intergenic | 35.0% | |
| TGGACTCATTGAAGTTGTTA+TGG | - | chr1.4:85309900-85309919 | MS.gene75001:CDS | 35.0% | |
| TGTCCAAAAAATAGGTCACT+TGG | + | chr1.4:85313111-85313130 | None:intergenic | 35.0% | |
| TTATTGTATTCGTATACGGC+AGG | - | chr1.4:85313489-85313508 | MS.gene75001:intron | 35.0% | |
| TTGAATAGAGTGTAACTCTC+GGG | - | chr1.4:85311587-85311606 | MS.gene75001:CDS | 35.0% | |
| TTTACCTCAGAAAAATCTGC+TGG | - | chr1.4:85313739-85313758 | MS.gene75001:CDS | 35.0% | |
| ! | AGAGTAGAGTACCTTAGAAA+TGG | + | chr1.4:85310013-85310032 | None:intergenic | 35.0% |
| ! | AGTATTTGAAGTCCGTCATT+GGG | - | chr1.4:85311879-85311898 | MS.gene75001:intron | 35.0% |
| ! | ATGAACACGACATTCAGTTT+TGG | + | chr1.4:85311701-85311720 | None:intergenic | 35.0% |
| ! | ATTTGATGGCTTCTTTATCG+TGG | + | chr1.4:85312618-85312637 | None:intergenic | 35.0% |
| ! | CAAATTTCACAAGTCGGTTT+AGG | + | chr1.4:85313217-85313236 | None:intergenic | 35.0% |
| ! | CAATCTTTGAAAGAAGGATG+GGG | + | chr1.4:85311483-85311502 | None:intergenic | 35.0% |
| ! | GGTAAAACTTCTTTTCTTGC+AGG | + | chr1.4:85313725-85313744 | None:intergenic | 35.0% |
| ! | TCATGGCTTATTTCAGGTAT+TGG | + | chr1.4:85311937-85311956 | None:intergenic | 35.0% |
| !! | AGCCAAGTGACTTGTTTATT+TGG | - | chr1.4:85310119-85310138 | MS.gene75001:CDS | 35.0% |
| !! | GACGTTCTGAAATTATTGAC+CGG | - | chr1.4:85313575-85313594 | MS.gene75001:intron | 35.0% |
| !! | GTTTTCTTTGAAAATGCCAC+TGG | - | chr1.4:85310829-85310848 | MS.gene75001:intron | 35.0% |
| !! | TACCATTTTTGCCATGGTAT+TGG | + | chr1.4:85312555-85312574 | None:intergenic | 35.0% |
| !! | TTCAACTGTGGATGCTATTT+TGG | - | chr1.4:85311732-85311751 | MS.gene75001:CDS | 35.0% |
| !!! | TTAACTCGAGGGCTATTTTT+CGG | - | chr1.4:85313358-85313377 | MS.gene75001:intron | 35.0% |
| AAATGACCCAATCACCAGAA+GGG | + | chr1.4:85309954-85309973 | None:intergenic | 40.0% | |
| AACCGTCAGATGCAAATCAT+TGG | - | chr1.4:85310590-85310609 | MS.gene75001:intron | 40.0% | |
| AACTTCTTCCATTGGAGATG+AGG | - | chr1.4:85309848-85309867 | MS.gene75001:CDS | 40.0% | |
| AATTCCATCCTCATCTCCAA+TGG | + | chr1.4:85309859-85309878 | None:intergenic | 40.0% | |
| ACTAATTGAGTGGGCAGAAA+AGG | + | chr1.4:85312723-85312742 | None:intergenic | 40.0% | |
| ACTATGTCTGTATGTGGAAC+TGG | - | chr1.4:85310760-85310779 | MS.gene75001:intron | 40.0% | |
| ACTTGTGCAAAGCTATCAGT+TGG | - | chr1.4:85313606-85313625 | MS.gene75001:intron | 40.0% | |
| AGCATGCTTCACCAAATCAT+TGG | + | chr1.4:85311914-85311933 | None:intergenic | 40.0% | |
| AGGCAGTAAAAATGATCCTC+GGG | - | chr1.4:85312576-85312595 | MS.gene75001:CDS | 40.0% | |
| AGTACGAGTAGCAAAAGTGA+TGG | - | chr1.4:85312302-85312321 | MS.gene75001:CDS | 40.0% | |
| AGTTAGCTAGTAGCAGATAG+TGG | + | chr1.4:85310325-85310344 | None:intergenic | 40.0% | |
| ATACATGATCTGGTTGAGGA+AGG | - | chr1.4:85310659-85310678 | MS.gene75001:intron | 40.0% | |
| ATTCTGTCGTAACTCAGAAC+CGG | + | chr1.4:85312388-85312407 | None:intergenic | 40.0% | |
| CAAAGAGGAGTTCAATTGGT+TGG | - | chr1.4:85311299-85311318 | MS.gene75001:CDS | 40.0% | |
| CCAAATCTAAGAACTGCTAG+TGG | + | chr1.4:85312942-85312961 | None:intergenic | 40.0% | |
| CCAACAAGGATCTGAAGATA+AGG | + | chr1.4:85311365-85311384 | None:intergenic | 40.0% | |
| CCACTAGCAGTTCTTAGATT+TGG | - | chr1.4:85312939-85312958 | MS.gene75001:CDS | 40.0% | |
| CCATGCATCATACGTAAAAG+TGG | + | chr1.4:85310260-85310279 | None:intergenic | 40.0% | |
| CCTTATCTTCAGATCCTTGT+TGG | - | chr1.4:85311362-85311381 | MS.gene75001:intron | 40.0% | |
| CTAATTGAGTGGGCAGAAAA+GGG | + | chr1.4:85312722-85312741 | None:intergenic | 40.0% | |
| CTGAATGTCGTGTTCATCAT+AGG | - | chr1.4:85311704-85311723 | MS.gene75001:CDS | 40.0% | |
| CTGAGTTACGACAGAATTCA+TGG | - | chr1.4:85312391-85312410 | MS.gene75001:CDS | 40.0% | |
| GAAACAGAACTAGACTTGGA+GGG | + | chr1.4:85313703-85313722 | None:intergenic | 40.0% | |
| GAACAAATACAGGTAACTGG+TGG | + | chr1.4:85312437-85312456 | None:intergenic | 40.0% | |
| GCTTCAAGTGCTTAGTTGTT+TGG | - | chr1.4:85312819-85312838 | MS.gene75001:intron | 40.0% | |
| GGAGGTTCTATATTGGTCAT+TGG | - | chr1.4:85310680-85310699 | MS.gene75001:intron | 40.0% | |
| GTACGAGTAGCAAAAGTGAT+GGG | - | chr1.4:85312303-85312322 | MS.gene75001:CDS | 40.0% | |
| GTCCAATACCATGGCAAAAA+TGG | - | chr1.4:85312550-85312569 | MS.gene75001:intron | 40.0% | |
| GTGGTCTGTGTCCAAAAAAT+AGG | + | chr1.4:85313119-85313138 | None:intergenic | 40.0% | |
| TACGAGTAGCAAAAGTGATG+GGG | - | chr1.4:85312304-85312323 | MS.gene75001:CDS | 40.0% | |
| TAGATTCCCTTCTGGTGATT+GGG | - | chr1.4:85309945-85309964 | MS.gene75001:CDS | 40.0% | |
| TATCTTCAGATCCTTGTTGG+TGG | - | chr1.4:85311365-85311384 | MS.gene75001:intron | 40.0% | |
| TCAACAGCACACGTAAATGT+AGG | + | chr1.4:85311670-85311689 | None:intergenic | 40.0% | |
| TCAAGTGGTCTGATATCACA+TGG | - | chr1.4:85313139-85313158 | MS.gene75001:intron | 40.0% | |
| TCAGAAAAATCTGCTGGTAG+TGG | - | chr1.4:85313745-85313764 | MS.gene75001:CDS | 40.0% | |
| TCCAATGAAATTGGAGGTGA+CGG | - | chr1.4:85310991-85311010 | MS.gene75001:CDS | 40.0% | |
| TGAATAGAGTGTAACTCTCG+GGG | - | chr1.4:85311588-85311607 | MS.gene75001:CDS | 40.0% | |
| TGAGGAAGGAGGTTCTATAT+TGG | - | chr1.4:85310673-85310692 | MS.gene75001:intron | 40.0% | |
| TGCTCAAAGAGGAGTTCAAT+TGG | - | chr1.4:85311295-85311314 | MS.gene75001:CDS | 40.0% | |
| TTCATTGCAGTCCAATACCA+TGG | - | chr1.4:85312541-85312560 | MS.gene75001:intron | 40.0% | |
| TTCTTTATCGTGGAGCCAAA+GGG | + | chr1.4:85312608-85312627 | None:intergenic | 40.0% | |
| TTGAACTCCTCTTTGAGCAA+TGG | + | chr1.4:85311294-85311313 | None:intergenic | 40.0% | |
| TTTGCACAAGTTCAATCTGC+CGG | + | chr1.4:85313597-85313616 | None:intergenic | 40.0% | |
| ! | ACTACCAGCAGATTTTTCTG+AGG | + | chr1.4:85313746-85313765 | None:intergenic | 40.0% |
| ! | ATGGTATTGGACTGCAATGA+AGG | + | chr1.4:85312542-85312561 | None:intergenic | 40.0% |
| ! | CAGTATTTGAAGTCCGTCAT+TGG | - | chr1.4:85311878-85311897 | MS.gene75001:intron | 40.0% |
| ! | CTCTACTCTACCTCTGTTTT+TGG | - | chr1.4:85310024-85310043 | MS.gene75001:CDS | 40.0% |
| ! | CTTTTGCACTTTCCTTTTCC+TGG | + | chr1.4:85311623-85311642 | None:intergenic | 40.0% |
| ! | CTTTTGGTACTTAGCCTCAA+GGG | + | chr1.4:85313679-85313698 | None:intergenic | 40.0% |
| ! | TCTTTTGGTACTTAGCCTCA+AGG | + | chr1.4:85313680-85313699 | None:intergenic | 40.0% |
| !! | AAGGTAGTTTTACCAACACC+AGG | + | chr1.4:85310710-85310729 | None:intergenic | 40.0% |
| !! | ATAGTGGATCTGTGATCAAG+AGG | - | chr1.4:85312067-85312086 | MS.gene75001:intron | 40.0% |
| !! | CAATGACGGACTTCAAATAC+TGG | + | chr1.4:85311880-85311899 | None:intergenic | 40.0% |
| !! | CCACTTTTACGTATGATGCA+TGG | - | chr1.4:85310257-85310276 | MS.gene75001:intron | 40.0% |
| !! | GTTTCTGGAACTTCTTCCAT+TGG | - | chr1.4:85309840-85309859 | MS.gene75001:CDS | 40.0% |
| !! | TGCCTTTACCATTTTTGCCA+TGG | + | chr1.4:85312561-85312580 | None:intergenic | 40.0% |
| !!! | ATTTTTGGGTTTGCATGTGC+TGG | - | chr1.4:85312127-85312146 | MS.gene75001:intron | 40.0% |
| !!! | GACCCAAGTGACCTATTTTT+TGG | - | chr1.4:85313105-85313124 | MS.gene75001:CDS | 40.0% |
| AATAGGAAGCCTAGTGACAG+TGG | + | chr1.4:85313788-85313807 | None:intergenic | 45.0% | |
| AATGCAAGTGTACACCTGCA+AGG | - | chr1.4:85312098-85312117 | MS.gene75001:intron | 45.0% | |
| ACAGCACACGTAAATGTAGG+TGG | + | chr1.4:85311667-85311686 | None:intergenic | 45.0% | |
| ACTCCATTTCATGGATCGAG+TGG | + | chr1.4:85312043-85312062 | None:intergenic | 45.0% | |
| AGAAAAGGGTTGTACCTCCA+AGG | + | chr1.4:85312708-85312727 | None:intergenic | 45.0% | |
| ATATTGGTCATTGGACCTCC+TGG | - | chr1.4:85310689-85310708 | MS.gene75001:intron | 45.0% | |
| ATCCCACTCGATCCATGAAA+TGG | - | chr1.4:85312037-85312056 | MS.gene75001:CDS | 45.0% | |
| CAATGAGTCCACCAATCTCT+TGG | + | chr1.4:85309891-85309910 | None:intergenic | 45.0% | |
| CAATTGGTTGGAACAGCACA+TGG | - | chr1.4:85311311-85311330 | MS.gene75001:CDS | 45.0% | |
| CAGAAACAAACACAGTCCAG+TGG | + | chr1.4:85310848-85310867 | None:intergenic | 45.0% | |
| CTAGATTCCCTTCTGGTGAT+TGG | - | chr1.4:85309944-85309963 | MS.gene75001:CDS | 45.0% | |
| CTCCATTTCATGGATCGAGT+GGG | + | chr1.4:85312042-85312061 | None:intergenic | 45.0% | |
| CTTCTTTATCGTGGAGCCAA+AGG | + | chr1.4:85312609-85312628 | None:intergenic | 45.0% | |
| GAAATGACCCAATCACCAGA+AGG | + | chr1.4:85309955-85309974 | None:intergenic | 45.0% | |
| GAGTACATAGTGATTCCTGG+TGG | - | chr1.4:85313529-85313548 | MS.gene75001:intron | 45.0% | |
| GCAAGTACCATTGCTCAAAG+AGG | - | chr1.4:85311284-85311303 | MS.gene75001:CDS | 45.0% | |
| GCAGGAAACAGAACTAGACT+TGG | + | chr1.4:85313707-85313726 | None:intergenic | 45.0% | |
| GCTGATGCAATTCTTGCATC+CGG | - | chr1.4:85312366-85312385 | MS.gene75001:CDS | 45.0% | |
| GGAAACAGAACTAGACTTGG+AGG | + | chr1.4:85313704-85313723 | None:intergenic | 45.0% | |
| GGCACCTTGAGAACAAATAC+AGG | + | chr1.4:85312447-85312466 | None:intergenic | 45.0% | |
| GTGATATCAGACCACTTGAG+TGG | + | chr1.4:85313138-85313157 | None:intergenic | 45.0% | |
| TCCGTCACCTCCAATTTCAT+TGG | + | chr1.4:85310995-85311014 | None:intergenic | 45.0% | |
| TCTTCCATTGGAGATGAGGA+TGG | - | chr1.4:85309852-85309871 | MS.gene75001:CDS | 45.0% | |
| TTGCAGGTGTACACTTGCAT+TGG | + | chr1.4:85312099-85312118 | None:intergenic | 45.0% | |
| TTGTATCGCCACCAAGAGAT+TGG | - | chr1.4:85309877-85309896 | MS.gene75001:CDS | 45.0% | |
| TTGTATTCGTATACGGCAGG+AGG | - | chr1.4:85313492-85313511 | MS.gene75001:intron | 45.0% | |
| TTTACGCCACGCCATTTCTA+AGG | - | chr1.4:85309999-85310018 | MS.gene75001:CDS | 45.0% | |
| ! | ACTAGACTTGGAGGGTCTTT+TGG | + | chr1.4:85313695-85313714 | None:intergenic | 45.0% |
| ! | AGAGTACCTTAGAAATGGCG+TGG | + | chr1.4:85310008-85310027 | None:intergenic | 45.0% |
| ! | GGCCAATGATTTGCATCTGA+CGG | + | chr1.4:85310595-85310614 | None:intergenic | 45.0% |
| ! | TTCTGACAGAGAGTATGACG+AGG | - | chr1.4:85311999-85312018 | MS.gene75001:CDS | 45.0% |
| ! | TTTCACAAGTCGGTTTAGGG+AGG | + | chr1.4:85313213-85313232 | None:intergenic | 45.0% |
| ! | TTTTCGGATGACAACCGATC+TGG | - | chr1.4:85310530-85310549 | MS.gene75001:intron | 45.0% |
| !! | AACGGGCACTGTTTTCTTGT+TGG | - | chr1.4:85312252-85312271 | MS.gene75001:intron | 45.0% |
| !! | ATTGGCCTTACTTGTCGTGT+TGG | - | chr1.4:85310608-85310627 | MS.gene75001:intron | 45.0% |
| !! | GAAAAATCTGCTGGTAGTGG+TGG | - | chr1.4:85313748-85313767 | MS.gene75001:CDS | 45.0% |
| !! | GATCCTTGTTGGTGGTATAG+AGG | - | chr1.4:85311373-85311392 | MS.gene75001:intron | 45.0% |
| !! | GTAGTTTTACCAACACCAGG+AGG | + | chr1.4:85310707-85310726 | None:intergenic | 45.0% |
| !! | TGACGGACTTCAAATACTGG+AGG | + | chr1.4:85311877-85311896 | None:intergenic | 45.0% |
| !!! | ACTGTGGATGCTATTTTGGC+AGG | - | chr1.4:85311736-85311755 | MS.gene75001:CDS | 45.0% |
| CAAGGGAAGAATCTGCAACC+TGG | + | chr1.4:85313662-85313681 | None:intergenic | 50.0% | |
| CAGGTACGGATCAAAACACC+AGG | - | chr1.4:85313641-85313660 | MS.gene75001:CDS | 50.0% | |
| CAGTTGGCTGCTGAAAAGTC+AGG | - | chr1.4:85313622-85313641 | MS.gene75001:intron | 50.0% | |
| CATAGTGATTCCTGGTGGAG+AGG | - | chr1.4:85313534-85313553 | MS.gene75001:intron | 50.0% | |
| CATGATCTGGTTGAGGAAGG+AGG | - | chr1.4:85310662-85310681 | MS.gene75001:intron | 50.0% | |
| CCACTATTACTACGCGCTTC+AGG | + | chr1.4:85310966-85310985 | None:intergenic | 50.0% | |
| CCAGAAGGGAATCTAGCAAG+AGG | + | chr1.4:85309940-85309959 | None:intergenic | 50.0% | |
| CCTCTTGCTAGATTCCCTTC+TGG | - | chr1.4:85309937-85309956 | MS.gene75001:CDS | 50.0% | |
| CCTGAAGCGCGTAGTAATAG+TGG | - | chr1.4:85310963-85310982 | MS.gene75001:CDS | 50.0% | |
| CGACAGAATTCATGGATCCG+TGG | - | chr1.4:85312399-85312418 | MS.gene75001:CDS | 50.0% | |
| CTCGACCAACACGACAAGTA+AGG | + | chr1.4:85310616-85310635 | None:intergenic | 50.0% | |
| GATGTTCCTCATGCAGGCAT+AGG | - | chr1.4:85311015-85311034 | MS.gene75001:CDS | 50.0% | |
| GATTGTGCAGAGAGACTGCT+AGG | - | chr1.4:85310923-85310942 | MS.gene75001:intron | 50.0% | |
| GCAATGGTACCACTGTCACT+AGG | - | chr1.4:85313776-85313795 | MS.gene75001:CDS | 50.0% | |
| GCACCTCTATACCACCAACA+AGG | + | chr1.4:85311379-85311398 | None:intergenic | 50.0% | |
| GGCTGCTGAAAAGTCAGGTA+CGG | - | chr1.4:85313627-85313646 | MS.gene75001:intron | 50.0% | |
| GGTGGAATTTCGCAACACCA+CGG | + | chr1.4:85312419-85312438 | None:intergenic | 50.0% | |
| GGTTGCAGATTCTTCCCTTG+AGG | - | chr1.4:85313662-85313681 | MS.gene75001:CDS | 50.0% | |
| TATCGCCACCAAGAGATTGG+TGG | - | chr1.4:85309880-85309899 | MS.gene75001:CDS | 50.0% | |
| TGAGTCCACCAATCTCTTGG+TGG | + | chr1.4:85309888-85309907 | None:intergenic | 50.0% | |
| TGGCGTGGCGTAAATCATCA+TGG | + | chr1.4:85309993-85310012 | None:intergenic | 50.0% | |
| TTCGTATACGGCAGGAGGTT+CGG | - | chr1.4:85313497-85313516 | MS.gene75001:intron | 50.0% | |
| TTGGACACAGACCACTCAAG+TGG | - | chr1.4:85313124-85313143 | MS.gene75001:intron | 50.0% | |
| ! | CTTTGAAAGAAGGATGGGGC+CGG | + | chr1.4:85311479-85311498 | None:intergenic | 50.0% |
| ! | TACTTGTCGTGTTGGTCGAG+CGG | - | chr1.4:85310616-85310635 | MS.gene75001:intron | 50.0% |
| !! | AAATCTGCTGGTAGTGGTGG+CGG | - | chr1.4:85313751-85313770 | MS.gene75001:CDS | 50.0% |
| AAAGAAGGATGGGGCCGGAA+TGG | + | chr1.4:85311474-85311493 | None:intergenic | 55.0% | |
| CAGAGAGACTGCTAGGATGC+TGG | - | chr1.4:85310930-85310949 | MS.gene75001:intron | 55.0% | |
| GACGGAGATGTTCCTCATGC+AGG | - | chr1.4:85311009-85311028 | MS.gene75001:CDS | 55.0% | |
| GAGTGTAACTCTCGGGGATG+AGG | - | chr1.4:85311594-85311613 | MS.gene75001:CDS | 55.0% | |
| GCGTCAATCTCTTCCAGCGA+TGG | + | chr1.4:85312686-85312705 | None:intergenic | 55.0% | |
| GCTGGAAGAGATTGACGCCT+TGG | - | chr1.4:85312688-85312707 | MS.gene75001:CDS | 55.0% | |
| GGAAGAGATTGACGCCTTGG+AGG | - | chr1.4:85312691-85312710 | MS.gene75001:CDS | 55.0% | |
| GGGATGAGGAAGCCAGGAAA+AGG | - | chr1.4:85311608-85311627 | MS.gene75001:CDS | 55.0% | |
| GTCATTGGACCTCCTGGTGT+TGG | - | chr1.4:85310695-85310714 | MS.gene75001:intron | 55.0% | |
| TCCTCATGCAGGCATAGGCA+GGG | - | chr1.4:85311020-85311039 | MS.gene75001:CDS | 55.0% | |
| TTCCTCATGCAGGCATAGGC+AGG | - | chr1.4:85311019-85311038 | MS.gene75001:CDS | 55.0% | |
| ! | ATCCTCGGGCTAGAACCCTT+TGG | - | chr1.4:85312590-85312609 | MS.gene75001:CDS | 55.0% |
| ! | TCCAGCGATGGTTTGCGCTT+CGG | + | chr1.4:85312674-85312693 | None:intergenic | 55.0% |
| AAGGATGGGGCCGGAATGGA+TGG | + | chr1.4:85311470-85311489 | None:intergenic | 60.0% | |
| ACCGAAGCGCAAACCATCGC+TGG | - | chr1.4:85312670-85312689 | MS.gene75001:CDS | 60.0% | |
| AGTTCCACAGCCTCTCCACC+AGG | + | chr1.4:85313547-85313566 | None:intergenic | 60.0% | |
| GATTCCTGGTGGAGAGGCTG+TGG | - | chr1.4:85313540-85313559 | MS.gene75001:intron | 60.0% | |
| ! | AGCCAAAGGGTTCTAGCCCG+AGG | + | chr1.4:85312595-85312614 | None:intergenic | 60.0% |
| ATGCAGGCATAGGCAGGGCG+AGG | - | chr1.4:85311025-85311044 | MS.gene75001:CDS | 65.0% | |
| CTCTCGGGGATGAGGAAGCC+AGG | - | chr1.4:85311602-85311621 | MS.gene75001:CDS | 65.0% | |
| GCCCTGCCTATGCCTGCATG+AGG | + | chr1.4:85311024-85311043 | None:intergenic | 65.0% | |
| ! | CGTGTTGGTCGAGCGGTGAG+TGG | - | chr1.4:85310623-85310642 | MS.gene75001:intron | 65.0% |
| !! | TCTGCTGGTAGTGGTGGCGG+CGG | - | chr1.4:85313754-85313773 | MS.gene75001:CDS | 65.0% |
| CAGGCATAGGCAGGGCGAGG+AGG | - | chr1.4:85311028-85311047 | MS.gene75001:CDS | 70.0% | |
| !! | GGTAGTGGTGGCGGCGGCAA+TGG | - | chr1.4:85313760-85313779 | MS.gene75001:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 85309838 | 85313819 | 85309838 | ID=MS.gene75001 |
| chr1.4 | mRNA | 85309838 | 85313819 | 85309838 | ID=MS.gene75001.t1;Parent=MS.gene75001 |
| chr1.4 | exon | 85313637 | 85313819 | 85313637 | ID=MS.gene75001.t1.exon1;Parent=MS.gene75001.t1 |
| chr1.4 | CDS | 85313637 | 85313819 | 85313637 | ID=cds.MS.gene75001.t1;Parent=MS.gene75001.t1 |
| chr1.4 | exon | 85312922 | 85313136 | 85312922 | ID=MS.gene75001.t1.exon2;Parent=MS.gene75001.t1 |
| chr1.4 | CDS | 85312922 | 85313136 | 85312922 | ID=cds.MS.gene75001.t1;Parent=MS.gene75001.t1 |
| chr1.4 | exon | 85312574 | 85312724 | 85312574 | ID=MS.gene75001.t1.exon3;Parent=MS.gene75001.t1 |
| chr1.4 | CDS | 85312574 | 85312724 | 85312574 | ID=cds.MS.gene75001.t1;Parent=MS.gene75001.t1 |
| chr1.4 | exon | 85312263 | 85312454 | 85312263 | ID=MS.gene75001.t1.exon4;Parent=MS.gene75001.t1 |
| chr1.4 | CDS | 85312263 | 85312454 | 85312263 | ID=cds.MS.gene75001.t1;Parent=MS.gene75001.t1 |
| chr1.4 | exon | 85311900 | 85312062 | 85311900 | ID=MS.gene75001.t1.exon5;Parent=MS.gene75001.t1 |
| chr1.4 | CDS | 85311900 | 85312062 | 85311900 | ID=cds.MS.gene75001.t1;Parent=MS.gene75001.t1 |
| chr1.4 | exon | 85311538 | 85311788 | 85311538 | ID=MS.gene75001.t1.exon6;Parent=MS.gene75001.t1 |
| chr1.4 | CDS | 85311538 | 85311788 | 85311538 | ID=cds.MS.gene75001.t1;Parent=MS.gene75001.t1 |
| chr1.4 | exon | 85311196 | 85311372 | 85311196 | ID=MS.gene75001.t1.exon7;Parent=MS.gene75001.t1 |
| chr1.4 | CDS | 85311196 | 85311372 | 85311196 | ID=cds.MS.gene75001.t1;Parent=MS.gene75001.t1 |
| chr1.4 | exon | 85310945 | 85311106 | 85310945 | ID=MS.gene75001.t1.exon8;Parent=MS.gene75001.t1 |
| chr1.4 | CDS | 85310945 | 85311106 | 85310945 | ID=cds.MS.gene75001.t1;Parent=MS.gene75001.t1 |
| chr1.4 | exon | 85309838 | 85310146 | 85309838 | ID=MS.gene75001.t1.exon9;Parent=MS.gene75001.t1 |
| chr1.4 | CDS | 85309838 | 85310146 | 85309838 | ID=cds.MS.gene75001.t1;Parent=MS.gene75001.t1 |
| Gene Sequence |
| Protein sequence |
